Citrus Sinensis ID: 021659

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------31
Protein Sequence
MDRLIRKFRRLLLSWLHRSRSGPKCFIRRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYATMPHSSCPEDCSTQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCYKYSRVSFI
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHcccccccccccccEEcHHHHHHHHcccccccccccccEEEEEEEccccEEEEEEcccccccHHHHHHHHHHHHHHHcccccccccEEccccEEEEEEccccccHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccccccEEEEccccccccccccccEEEccccccccccccccccccccHHHccccccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHcccccHHHcccccccccccccEEcHHHHHHHHcccHccccccccccEEEcEcccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHEEEEcccccEEEEEEEcccccHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEcHHHHHHEccccccccHcHccccccccEEEEccccccHHHHHccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHcccHHHHccHHHcccccHHHHHHHHHHHHHHccccHcccccHHHHHHHHccccccccccccccccc
Coil and Loop (DISEMBL)
MDRLIRKFRRLLLSWLHrsrsgpkcfirrfsykdikmatdGFHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFdniengslkehlndplktpldwKTRLQIAIGVAAALEYLLLFSnlpmyyvsissssimldenftaklsdvgffnsvrnyatmphsscpedcstqdcsNIIFQLGVLILELvtgqspeegdVDLIQWIQESSisssihrmidpdlggsydsKELKKLLAVARLCIktkdkptisipqiSRYLQNevdiqcykysrvsfi
Flexible Loop (DISEMBL)
MDRLIRKFRRLLLswlhrsrsgpkcfirrfSYKDIKMATDGFHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIengslkehlndplktpLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYATMPHSSCPEDCSTQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCiktkdkptisipqisrylqnevdiqcykysrvsfi
Low Complexity Region (SEG)
MDRLIRKFrrlllswlhrsrsGPKCFIRRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIqllgrlhhrhllalqgFSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVsissssiMLDENFTAKLSDVGFFNSVRNYATMPHSSCPEDCSTQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQEssisssiHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCYKYSRVSFI
Disordered region (IsUnstruct)
***LIRKFRRLLLSWLHRSRSGPKCFIRRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYATMPHSSCPEDCSTQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCYKYSRV***
Disordered Region (DISOPRED)
******************************SYKDIKMATDGFHRIVYTNSHGAAYKARFQDGEVALVK**********AF*REIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYATMPHSSCPEDCSTQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCYKYS*****
Disordered Region (DISEMBL)
MDRLIRKFRRLLLSWLHRSRSGPKCFIRRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYATM*********STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCYKYSRVSFI
Disordered Region (DISPRO)
**********************PKCFIRRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYATMPHSSCPEDCSTQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCYKYSRVSF*
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDRLIRKFRRLLLSWLHRSRSGPKCFIRRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYATMPHSSCPEDCSTQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCYKYSRVSFI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	309	2.2.26 [Sep-21-2011]
Q9FX99	663	Probable receptor-like pr	no	no	0.873	0.407	0.377	4e-45
Q6NKZ9	437	Probable receptor-like se	no	no	0.847	0.599	0.317	4e-31
Q9SX31	708	Proline-rich receptor-lik	no	no	0.792	0.346	0.321	2e-30
Q8RWW0	744	Receptor-like serine/thre	no	no	0.883	0.366	0.292	5e-30
Q94AG2	625	Somatic embryogenesis rec	no	no	0.860	0.425	0.304	1e-29
C0LGQ7	898	Probable LRR receptor-lik	no	no	0.883	0.304	0.302	2e-29
C0LGD7	953	Probable LRR receptor-lik	no	no	0.860	0.279	0.306	6e-29
Q9SFT7	414	Serine/threonine-protein	no	no	0.805	0.601	0.322	6e-29
Q9LV48	652	Proline-rich receptor-lik	no	no	0.867	0.411	0.283	6e-29
Q9XIC7	628	Somatic embryogenesis rec	no	no	0.860	0.423	0.300	4e-28

>sp|Q9FX99|Y1497_ARATH Probable receptor-like protein kinase At1g49730 OS=Arabidopsis thaliana GN=At1g49730 PE=1 SV=1

 Score =  182 bits (461), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 109/289 (37%), Positives = 170/289 (58%), Gaps = 19/289 (6%)

Query: 28  RRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDA-FYREIQL 86
           R+FSYK++  AT+ F+ ++     G  YKA F DG +A VK++  ++ + +  F REI L
Sbjct: 315 RKFSYKEMTNATNDFNTVIGQGGFGTVYKAEFNDGLIAAVKKMNKVSEQAEQDFCREIGL 374

Query: 87  LGRLHHRHLLALQGFSTGRK-RLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAA 145
           L +LHHR+L+AL+GF   +K R LV+D ++NGSLK+HL+   K P  W TR++IAI VA 
Sbjct: 375 LAKLHHRNLVALKGFCINKKERFLVYDYMKNGSLKDHLHAIGKPPPSWGTRMKIAIDVAN 434

Query: 146 ALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYAT-----------MP 194
           ALEYL  + + P+ +  I SS+I+LDENF AKLSD G  +S R+ +             P
Sbjct: 435 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLSDFGLAHSSRDGSVCFEPVNTDIRGTP 494

Query: 195 HSSCPEDCSTQDCS--NIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIH-RMI 251
               PE   TQ+ +  + ++  GV++LEL+TG+   +   +L++  Q   ++ S H  ++
Sbjct: 495 GYVDPEYVVTQELTEKSDVYSYGVVLLELITGRRAVDEGRNLVEMSQRFLLAKSKHLELV 554

Query: 252 DPDLGGSYD---SKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVD 297
           DP +  S +    K+L  ++ V RLC + + +   SI Q+ R L    D
Sbjct: 555 DPRIKDSINDAGGKQLDAVVTVVRLCTEKEGRSRPSIKQVLRLLCESCD 603

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q6NKZ9|Y4345_ARATH Probable receptor-like serine/threonine-protein kinase At4g34500 OS=Arabidopsis thaliana GN=At4g34500 PE=2 SV=1

 Score =  135 bits (340), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 157/293 (53%), Gaps = 31/293 (10%)

Query: 30  FSYKDIKMATDGFH--RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDA---FYREI 84
           +S KD+++AT GF    ++    +G  Y+A F DG VA VK +  LN +  A   F  E+
Sbjct: 133 YSLKDLEIATRGFSDDNMIGEGGYGVVYRADFSDGSVAAVKNL--LNNKGQAEKEFKVEV 190

Query: 85  QLLGRLHHRHLLALQGF---STGRKRLLVFDNIENGSLKEHLNDPLK--TPLDWKTRLQI 139
           + +G++ H++L+ L G+   S   +R+LV++ I+NG+L++ L+  +   +PL W  R++I
Sbjct: 191 EAIGKVRHKNLVGLMGYCADSAQSQRMLVYEYIDNGNLEQWLHGDVGPVSPLTWDIRMKI 250

Query: 140 AIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGF---------FNSVRNY 190
           AIG A  L YL       + +  + SS+I+LD+ + AK+SD G          + + R  
Sbjct: 251 AIGTAKGLAYLHEGLEPKVVHRDVKSSNILLDKKWNAKVSDFGLAKLLGSETSYVTTRVM 310

Query: 191 ATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEE-----GDVDLIQWIQESS 242
            T  + S PE  ST    +CS++ +  GVL++E++TG+SP +     G+++L+ W +   
Sbjct: 311 GTFGYVS-PEYASTGMLNECSDV-YSFGVLLMEIITGRSPVDYSRPPGEMNLVDWFKGMV 368

Query: 243 ISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNE 295
            S     +IDP +  S   + LK+ L V   CI         + QI   L+ E
Sbjct: 369 ASRRGEEVIDPKIKTSPPPRALKRALLVCLRCIDLDSSKRPKMGQIIHMLEAE 421

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SX31|PERK9_ARATH Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1

 Score =  133 bits (334), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 146/271 (53%), Gaps = 26/271 (9%)

Query: 30  FSYKDIKMATDGFHR--IVYTNSHGAAYKARFQDGEVALVKEIQALNLEKD-AFYREIQL 86
           FSY+++  AT+GF +  ++     G  YK    DG V  VK+++    + D  F  E++ 
Sbjct: 365 FSYEELVKATNGFSQENLLGEGGFGCVYKGILPDGRVVAVKQLKIGGGQGDREFKAEVET 424

Query: 87  LGRLHHRHLLALQGFS-TGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAA 145
           L R+HHRHL+++ G   +G +RLL++D + N  L  HL+   K+ LDW TR++IA G A 
Sbjct: 425 LSRIHHRHLVSIVGHCISGDRRLLIYDYVSNNDLYFHLHGE-KSVLDWATRVKIAAGAAR 483

Query: 146 ALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFN---------SVRNYATMPHS 196
            L YL    +  + +  I SS+I+L++NF A++SD G            + R   T  + 
Sbjct: 484 GLAYLHEDCHPRIIHRDIKSSNILLEDNFDARVSDFGLARLALDCNTHITTRVIGTFGYM 543

Query: 197 SCPEDCSTQDCS--NIIFQLGVLILELVTGQSPEE-----GDVDLIQW----IQESSISS 245
           + PE  S+   +  + +F  GV++LEL+TG+ P +     GD  L++W    I  +  + 
Sbjct: 544 A-PEYASSGKLTEKSDVFSFGVVLLELITGRKPVDTSQPLGDESLVEWARPLISHAIETE 602

Query: 246 SIHRMIDPDLGGSYDSKELKKLLAVARLCIK 276
               + DP LGG+Y   E+ +++  A  C++
Sbjct: 603 EFDSLADPKLGGNYVESEMFRMIEAAGACVR 633

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8RWW0|ALE2_ARATH Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana GN=ALE2 PE=1 SV=1

 Score =  131 bits (330), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 158/301 (52%), Gaps = 28/301 (9%)

Query: 27  IRRFSYKDIKMATDGF--HRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKD-AFYRE 83
           ++ F+  +++ ATD F   R++     G  Y+   +DG    VK +   N  +D  F  E
Sbjct: 334 VKTFTLSELEKATDRFSAKRVLGEGGFGRVYQGSMEDGTEVAVKLLTRDNQNRDREFIAE 393

Query: 84  IQLLGRLHHRHLLALQGFS-TGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIG 142
           +++L RLHHR+L+ L G    GR R L+++ + NGS++ HL++     LDW  RL+IA+G
Sbjct: 394 VEMLSRLHHRNLVKLIGICIEGRTRCLIYELVHNGSVESHLHE---GTLDWDARLKIALG 450

Query: 143 VAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFN---------SVRNYATM 193
            A  L YL   SN  + +    +S+++L+++FT K+SD G            S R   T 
Sbjct: 451 AARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSQHISTRVMGTF 510

Query: 194 PHSSCPEDCSTQD--CSNIIFQLGVLILELVTGQSP-----EEGDVDLIQWIQE-SSISS 245
            + + PE   T      + ++  GV++LEL+TG+ P       G+ +L+ W +   +   
Sbjct: 511 GYVA-PEYAMTGHLLVKSDVYSYGVVLLELLTGRRPVDMSQPSGEENLVTWARPLLANRE 569

Query: 246 SIHRMIDPDLGGSYDSKELKKLLAVARLCI--KTKDKPTIS-IPQISRYLQNEVDIQCYK 302
            + +++DP L G+Y+  ++ K+ A+A +C+  +   +P +  + Q  + + N+ D  C  
Sbjct: 570 GLEQLVDPALAGTYNFDDMAKVAAIASMCVHQEVSHRPFMGEVVQALKLIYNDADETCGD 629

Query: 303 Y 303
           Y
Sbjct: 630 Y 630

Required during the differentiation of the protoderm into shoots epidermis and cuticle.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q94AG2|SERK1_ARATH Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2

 Score =  130 bits (328), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 153/296 (51%), Gaps = 30/296 (10%)

Query: 27  IRRFSYKDIKMATDGF--HRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDA--FYR 82
           ++RFS +++++A+DGF    I+     G  YK R  DG +  VK ++          F  
Sbjct: 287 LKRFSLRELQVASDGFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQT 346

Query: 83  EIQLLGRLHHRHLLALQGFS-TGRKRLLVFDNIENGSLKEHLND--PLKTPLDWKTRLQI 139
           E++++    HR+LL L+GF  T  +RLLV+  + NGS+   L +  P + PLDW TR +I
Sbjct: 347 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRI 406

Query: 140 AIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGF-----------FNSVR 188
           A+G A  L YL    +  + +  + +++I+LDE F A + D G              +VR
Sbjct: 407 ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR 466

Query: 189 NYATMPHSSCPEDCSTQDCS--NIIFQLGVLILELVTGQS-------PEEGDVDLIQWIQ 239
              T+ H + PE  ST   S    +F  G+++LEL+TGQ          + DV L+ W++
Sbjct: 467 --GTIGHIA-PEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVK 523

Query: 240 ESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNE 295
                  +  ++DPDL  +Y+ +EL++++ VA LC +        + ++ R L+ +
Sbjct: 524 GLLKEKKLEMLVDPDLQTNYEERELEQVIQVALLCTQGSPMERPKMSEVVRMLEGD 579

Dual specificity kinase acting on both serine/threonine-and tyrosine-containing substrates. Phosphorylates BRI1 on 'Ser-887' and CDC48 on at least one threonine residue and on 'Ser-41'. Confers embryogenic competence. Acts redundantly with SERK2 as a control point for sporophytic development controlling male gametophyte production. Involved in the brassinolide signaling pathway.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGQ7|Y4245_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1

 Score =  129 bits (325), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 21/294 (7%)

Query: 19  SRSGPKCFIRRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEK- 77
           SRS      R ++Y+++ + T+ F R +     G  Y     D E   VK +   + +  
Sbjct: 570 SRSSMVANKRSYTYEEVAVITNNFERPLGEGGFGVVYHGNVNDNEQVAVKVLSESSAQGY 629

Query: 78  DAFYREIQLLGRLHHRHLLALQGF-STGRKRLLVFDNIENGSLKEHLN-DPLKTPLDWKT 135
             F  E+ LL R+HH +L+ L G+   G+  +L+++ + NG+LK+HL+ +  ++PL W+ 
Sbjct: 630 KQFKAEVDLLLRVHHINLVTLVGYCDEGQHLVLIYEYMSNGNLKQHLSGENSRSPLSWEN 689

Query: 136 RLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-------- 187
           RL+IA   A  LEYL +    PM +  I S +I+LD NF AKL D G   S         
Sbjct: 690 RLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSETHV 749

Query: 188 -RNYATMPHSSCPEDCSTQDCS--NIIFQLGVLILELVTG-----QSPEEGDVDLIQWIQ 239
             N A  P    PE   T   +  + +F  GV++LE++T      Q+ E+  +   +W+ 
Sbjct: 750 STNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVIDQTREKSHIG--EWVG 807

Query: 240 ESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQ 293
               +  I  ++DP + G YDS  L K L +A  C+        ++ Q++  LQ
Sbjct: 808 FKLTNGDIKNIVDPSMNGDYDSSSLWKALELAMSCVSPSSSGRPNMSQVANELQ 861

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGD7|Y1684_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2

 Score =  128 bits (321), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 156/287 (54%), Gaps = 21/287 (7%)

Query: 27  IRRFSYKDIKMATDGFHRI--VYTNSHGAAYKARFQDGEVALVKEIQALNLEKDA-FYRE 83
           ++ F+Y ++ +ATD F+    +    +G  YK     G V  +K  Q  +L+ +  F  E
Sbjct: 610 VKSFTYAELALATDNFNSSTQIGQGGYGKVYKGTLGSGTVVAIKRAQEGSLQGEKEFLTE 669

Query: 84  IQLLGRLHHRHLLALQGFSTGR-KRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIG 142
           I+LL RLHHR+L++L GF     +++LV++ +ENG+L+++++  LK PLD+  RL+IA+G
Sbjct: 670 IELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTLRDNISVKLKEPLDFAMRLRIALG 729

Query: 143 VAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFN----------SVRNYAT 192
            A  + YL   +N P+++  I +S+I+LD  FTAK++D G             S ++ +T
Sbjct: 730 SAKGILYLHTEANPPIFHRDIKASNILLDSRFTAKVADFGLSRLAPVPDMEGISPQHVST 789

Query: 193 M----PHSSCPEDCSTQDCSNI--IFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSS 246
           +    P    PE   T   ++   ++ LGV++LEL TG  P     ++++ I  +  S S
Sbjct: 790 VVKGTPGYLDPEYFLTHQLTDKSDVYSLGVVLLELFTGMQPITHGKNIVREINIAYESGS 849

Query: 247 IHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQ 293
           I   +D  +    D + L+K   +A  C + +     S+ ++ R L+
Sbjct: 850 ILSTVDKRMSSVPD-ECLEKFATLALRCCREETDARPSMAEVVRELE 895

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SFT7|Y3707_ARATH Serine/threonine-protein kinase At3g07070 OS=Arabidopsis thaliana GN=At3g07070 PE=2 SV=1

 Score =  128 bits (321), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 88/273 (32%), Positives = 148/273 (54%), Gaps = 24/273 (8%)

Query: 30  FSYKDIKMATDGFHR--IVYTNSHGAAYKARFQD-GEVALVKEIQALNLEKD-AFYREIQ 85
           FS++++  AT  F +  ++     G  YK + +  G +  VK++    L+ +  F  E+ 
Sbjct: 67  FSFRELATATKNFRQECLIGEGGFGRVYKGKLEKTGMIVAVKQLDRNGLQGNKEFIVEVL 126

Query: 86  LLGRLHHRHLLALQGF-STGRKRLLVFDNIENGSLKEHLND--PLKTPLDWKTRLQIAIG 142
           +L  LHH+HL+ L G+ + G +RLLV++ +  GSL++HL D  P + PLDW TR++IA+G
Sbjct: 127 MLSLLHHKHLVNLIGYCADGDQRLLVYEYMSRGSLEDHLLDLTPDQIPLDWDTRIRIALG 186

Query: 143 VAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSD--------VGFFNSVRNYATMP 194
            A  LEYL   +N P+ Y  + +++I+LD  F AKLSD        VG    V +     
Sbjct: 187 AAMGLEYLHDKANPPVIYRDLKAANILLDGEFNAKLSDFGLAKLGPVGDKQHVSSRVMGT 246

Query: 195 HSSC-PEDCSTQDCS--NIIFQLGVLILELVTGQ-----SPEEGDVDLIQWIQES-SISS 245
           +  C PE   T   +  + ++  GV++LEL+TG+     +  + + +L+ W Q      S
Sbjct: 247 YGYCAPEYQRTGQLTTKSDVYSFGVVLLELITGRRVIDTTRPKDEQNLVTWAQPVFKEPS 306

Query: 246 SIHRMIDPDLGGSYDSKELKKLLAVARLCIKTK 278
               + DP L G +  K L + +AVA +C++ +
Sbjct: 307 RFPELADPSLEGVFPEKALNQAVAVAAMCLQEE 339

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LV48|PERK1_ARATH Proline-rich receptor-like protein kinase PERK1 OS=Arabidopsis thaliana GN=PERK1 PE=1 SV=1

 Score =  128 bits (321), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 154/293 (52%), Gaps = 25/293 (8%)

Query: 30  FSYKDIKMATDGFHR--IVYTNSHGAAYKARFQDGEVALVKEIQALNLEKD-AFYREIQL 86
           F+Y+++  AT+GF    ++     G  +K     G+   VK+++A + + +  F  E+++
Sbjct: 268 FTYEELSRATNGFSEANLLGQGGFGYVHKGILPSGKEVAVKQLKAGSGQGEREFQAEVEI 327

Query: 87  LGRLHHRHLLALQGFS-TGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAA 145
           + R+HHRHL++L G+   G +RLLV++ + N +L+ HL+   +  ++W TRL+IA+G A 
Sbjct: 328 ISRVHHRHLVSLIGYCMAGVQRLLVYEFVPNNNLEFHLHGKGRPTMEWSTRLKIALGSAK 387

Query: 146 ALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFN---------SVRNYATMPHS 196
            L YL    N  + +  I +S+I++D  F AK++D G            S R   T  + 
Sbjct: 388 GLSYLHEDCNPKIIHRDIKASNILIDFKFEAKVADFGLAKIASDTNTHVSTRVMGTFGYL 447

Query: 197 SCPEDCSTQDCS--NIIFQLGVLILELVTGQSPEEG-----DVDLIQW----IQESSISS 245
           + PE  ++   +  + +F  GV++LEL+TG+ P +      D  L+ W    +  +S   
Sbjct: 448 A-PEYAASGKLTEKSDVFSFGVVLLELITGRRPVDANNVYVDDSLVDWARPLLNRASEEG 506

Query: 246 SIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDI 298
               + D  +G  YD +E+ +++A A  C++   +    + QI R L+  V +
Sbjct: 507 DFEGLADSKMGNEYDREEMARMVACAAACVRHSARRRPRMSQIVRALEGNVSL 559

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9XIC7|SERK2_ARATH Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1

 Score =  125 bits (314), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 149/296 (50%), Gaps = 30/296 (10%)

Query: 27  IRRFSYKDIKMATDGF--HRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDA--FYR 82
           ++RFS +++++ATD F    I+     G  YK R  DG +  VK ++          F  
Sbjct: 290 LKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQT 349

Query: 83  EIQLLGRLHHRHLLALQGFS-TGRKRLLVFDNIENGSLKEHLND--PLKTPLDWKTRLQI 139
           E++++    HR+LL L+GF  T  +RLLV+  + NGS+   L +  P + PL W  R QI
Sbjct: 350 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLAWSIRQQI 409

Query: 140 AIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGF-----------FNSVR 188
           A+G A  L YL    +  + +  + +++I+LDE F A + D G              +VR
Sbjct: 410 ALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLARLMDYKDTHVTTAVR 469

Query: 189 NYATMPHSSCPEDCSTQDCSNI--IFQLGVLILELVTGQS-------PEEGDVDLIQWIQ 239
              T+ H + PE  ST   S    +F  G+++LEL+TGQ          + DV L+ W++
Sbjct: 470 --GTIGHIA-PEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVK 526

Query: 240 ESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNE 295
                  +  ++DPDL  +Y   E+++L+ VA LC ++       + ++ R L+ +
Sbjct: 527 GLLKEKKLEMLVDPDLQSNYTEAEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 582

Serine/threonine-kinase involved in brassinosteroid-dependent and -independent signaling pathways. Acts redundantly with SERK1 as a control point for sporophytic development controlling male gametophyte production.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	309
224054440	300	predicted protein [Populus trichocarpa]	0.967	0.996	0.733	1e-127
255549641	306	Serine/threonine-protein kinase PBS1, pu	0.970	0.980	0.719	1e-123
225464820	301	PREDICTED: probable receptor-like protei	0.964	0.990	0.724	1e-122
224106720	273	predicted protein [Populus trichocarpa]	0.877	0.992	0.742	1e-113
30688291	307	protein kinase family protein [Arabidops	0.957	0.964	0.62	1e-104
297808203	307	kinase family protein [Arabidopsis lyrat	0.957	0.964	0.613	1e-103
356542062	307	PREDICTED: probable receptor-like protei	0.974	0.980	0.618	1e-102
449444823	328	PREDICTED: probable receptor-like protei	0.967	0.911	0.619	1e-101
30688287	299	protein kinase family protein [Arabidops	0.932	0.963	0.603	3e-97
357453285	324	Wall-associated receptor kinase-like pro	0.935	0.891	0.572	8e-93

>gi|224054440|ref|XP_002298261.1| predicted protein [Populus trichocarpa] gi|222845519|gb|EEE83066.1| predicted protein [Populus trichocarpa]

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 220/300 (73%), Positives = 253/300 (84%), Gaps = 1/300 (0%)

Query: 1   MDRLIRKFRRLLLSWLHRSRSGPKCFIRRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQ 60
           M RLI+K R  LL+WL RSRSGP   +RR SYKD+K ATDGF RI+Y+N+HGAAY+ARFQ
Sbjct: 1   MHRLIQKMRPYLLAWLRRSRSGPASLVRRLSYKDMKRATDGFRRIIYSNTHGAAYRARFQ 60

Query: 61  DGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLK 120
           DGEVALVKE++ LN  KD F++E+QLLG+LHHRHLLAL+GFS G KRLLVFDNIENGSLK
Sbjct: 61  DGEVALVKEVKDLNQGKDKFFKEVQLLGQLHHRHLLALKGFSIGCKRLLVFDNIENGSLK 120

Query: 121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSD 180
           EHLNDPLKTPL+W TRLQIAIGVAAALEYLLLFSN P+Y+VSIS+S++MLDEN+TAK+SD
Sbjct: 121 EHLNDPLKTPLNWNTRLQIAIGVAAALEYLLLFSNPPIYHVSISASNVMLDENYTAKISD 180

Query: 181 VGFFNSVRNYATMPHSSCPEDCSTQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQE 240
           VG  NSV +Y TMPHSS  EDC    C N+ FQLGVLILEL+TGQS E+G  DLIQWIQE
Sbjct: 181 VGLLNSVGDYVTMPHSSNSEDCMDHACGNLTFQLGVLILELITGQSSEKGSTDLIQWIQE 240

Query: 241 SSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQC 300
           S   SSI +MIDPDLG +YDS+ELK LLAVARLCIK+ DKP  SIPQI RYLQ +V+  C
Sbjct: 241 SRFRSSIQKMIDPDLGNNYDSRELKNLLAVARLCIKSGDKPKFSIPQIFRYLQ-KVENTC 299

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255549641|ref|XP_002515872.1| Serine/threonine-protein kinase PBS1, putative [Ricinus communis] gi|223545027|gb|EEF46541.1| Serine/threonine-protein kinase PBS1, putative [Ricinus communis]

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 218/303 (71%), Positives = 247/303 (81%), Gaps = 3/303 (0%)

Query: 1   MDRLIRKFRRLLLSWLHRSRSGPKCFIRRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQ 60
           MDRLIRK R  LL+WL RSRSGP  F+RRFSYKD+KMATDGF RIVY++SHG AYKARFQ
Sbjct: 5   MDRLIRKIRAHLLAWLRRSRSGPVSFVRRFSYKDLKMATDGFQRIVYSDSHGTAYKARFQ 64

Query: 61  DGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLK 120
           DG +ALV E++ LN E D F RE+QLLGRLHHRHLL+L+GFS GRKRLLVFDNIENGSLK
Sbjct: 65  DGYIALVMEVKDLNQENDVFIREVQLLGRLHHRHLLSLKGFSIGRKRLLVFDNIENGSLK 124

Query: 121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSD 180
           EH NDPL+TPL+WKTRLQIAIGVAAALEYLLLFSNLP Y VSISSS+IMLDENFTAKLS+
Sbjct: 125 EHFNDPLRTPLNWKTRLQIAIGVAAALEYLLLFSNLPTYRVSISSSNIMLDENFTAKLSN 184

Query: 181 VGFFNSVRNYAT--MPHSSCPEDCSTQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWI 238
           +G  NSV    T   PH+SC  DC  Q C N+IFQLGVLILEL+TGQS E+G  DL+QWI
Sbjct: 185 IGLLNSVEKCITTPTPHASC-TDCMDQRCGNLIFQLGVLILELITGQSSEKGSTDLVQWI 243

Query: 239 QESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDI 298
           Q S   SS+ +MIDPDLG SY+S+ELK LLAVARLCI + + P  S+PQI RYLQ +   
Sbjct: 244 QGSRFRSSMQKMIDPDLGNSYNSRELKNLLAVARLCINSGNDPKFSLPQIFRYLQKKAGF 303

Query: 299 QCY 301
             Y
Sbjct: 304 PHY 306

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225464820|ref|XP_002270105.1| PREDICTED: probable receptor-like protein kinase At1g49730 [Vitis vinifera] gi|296084850|emb|CBI28259.3| unnamed protein product [Vitis vinifera]

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 216/298 (72%), Positives = 250/298 (83%)

Query: 1   MDRLIRKFRRLLLSWLHRSRSGPKCFIRRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQ 60
           MD  IRKFR LLL+WLH  RSGP  F+RRFSYKDIK ATDGF RI Y+NS+G AYKA FQ
Sbjct: 1   MDLPIRKFRLLLLAWLHPHRSGPVSFVRRFSYKDIKRATDGFRRISYSNSYGVAYKAIFQ 60

Query: 61  DGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLK 120
           DG VALVKE+   N  KD FY E+Q LGRLHHRHLLAL+GFSTGRKR LVF++IENGSLK
Sbjct: 61  DGLVALVKEVGDFNQGKDIFYGEVQRLGRLHHRHLLALRGFSTGRKRFLVFESIENGSLK 120

Query: 121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSD 180
           EHLNDPLKTPL+W+TRLQIAIGVAAALEYL LF+  P+Y+VSI SS+I+LDENFTAKL+D
Sbjct: 121 EHLNDPLKTPLNWRTRLQIAIGVAAALEYLQLFNEPPIYHVSIRSSNILLDENFTAKLAD 180

Query: 181 VGFFNSVRNYATMPHSSCPEDCSTQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQE 240
           VG  +S  N+AT  + SC +DC+ Q+ +NIIFQLGVLILEL+TGQS E+G VDLIQW+QE
Sbjct: 181 VGVLSSGGNHATAQNVSCSKDCTGQEGNNIIFQLGVLILELITGQSSEKGGVDLIQWVQE 240

Query: 241 SSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDI 298
           S +S S+ +MIDPDLG SYDS+EL  LLAVARLCIK+ +KPT SIPQI RYLQ +VDI
Sbjct: 241 SRLSRSMQKMIDPDLGNSYDSRELNNLLAVARLCIKSGEKPTFSIPQIFRYLQKKVDI 298

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224106720|ref|XP_002314261.1| predicted protein [Populus trichocarpa] gi|222850669|gb|EEE88216.1| predicted protein [Populus trichocarpa]

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 202/272 (74%), Positives = 229/272 (84%), Gaps = 1/272 (0%)

Query: 27  IRRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQL 86
           +RRFSYKDIK ATDGFHRI+Y+NSHGAAY+ARFQDGEVALVKE++ LN  KD F +E+QL
Sbjct: 1   VRRFSYKDIKRATDGFHRIIYSNSHGAAYRARFQDGEVALVKEVKDLNQGKDNFLKEVQL 60

Query: 87  LGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAA 146
           LG+LHHRHLLAL+GFSTG KRLLV+DNIE GSLKEHLNDPLKTPL+WKTRLQIAIGVAAA
Sbjct: 61  LGQLHHRHLLALKGFSTGHKRLLVYDNIEMGSLKEHLNDPLKTPLNWKTRLQIAIGVAAA 120

Query: 147 LEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYATMPHSSCPED-CSTQ 205
           LEYLLLFSN P+Y+VSIS+S+IMLDEN+ AK+SDVG  NSV    T+PHSS  E  C   
Sbjct: 121 LEYLLLFSNPPVYHVSISASNIMLDENYIAKISDVGLINSVGANVTVPHSSNSEGYCMDH 180

Query: 206 DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELK 265
              N+ FQLGVLILEL+TGQS E G  DLIQWIQES   SSI +MIDPDLG +YDS+ELK
Sbjct: 181 TFGNLTFQLGVLILELITGQSSENGITDLIQWIQESRYRSSIQKMIDPDLGNNYDSRELK 240

Query: 266 KLLAVARLCIKTKDKPTISIPQISRYLQNEVD 297
            LLAVARLCIK+ DKP  SIPQI RYLQ + +
Sbjct: 241 NLLAVARLCIKSGDKPKFSIPQIFRYLQKKAE 272

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30688291|ref|NP_680192.2| protein kinase family protein [Arabidopsis thaliana] gi|51970950|dbj|BAD44167.1| somatic embryogenesis receptor-like kinase - like protein [Arabidopsis thaliana] gi|332005593|gb|AED92976.1| protein kinase family protein [Arabidopsis thaliana]

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 186/300 (62%), Positives = 239/300 (79%), Gaps = 4/300 (1%)

Query: 3   RLIRKFRRLLLSWLHRSRSGPKCFIRRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQDG 62
           RL R+ R LLL+WL RSRSG   FIRRF YK+I  AT+GF +++YTN HG+AY+A+F+ G
Sbjct: 6   RLSRRIRFLLLAWLRRSRSGRIEFIRRFGYKEIIKATEGFRKVIYTNYHGSAYRAKFKGG 65

Query: 63  EVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKEH 122
           EVALVKE+ AL+L ++ F  E+QLLGRL HRHLL L+GF  GRKRLLVFDNIENGSLKEH
Sbjct: 66  EVALVKELTALDLGRERFDEEVQLLGRLRHRHLLTLRGFCIGRKRLLVFDNIENGSLKEH 125

Query: 123 LNDPLKTPLDWKTRLQIAIGVAAALEYLLLFS--NLPMYYVSISSSSIMLDENFTAKLSD 180
           LNDPLKTPL+WKTR+QIAIGVAAALEYLL+FS  +  +Y VS++S +IMLDENFT K+SD
Sbjct: 126 LNDPLKTPLNWKTRIQIAIGVAAALEYLLVFSSNDAQIYDVSVNSCNIMLDENFTPKISD 185

Query: 181 VGFFNSVRNYATMPHSSCPE-DCSTQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQ 239
           +      +N+    H SC E  C+ ++C N+IFQLGVL+LEL+TGQS +    DLI+W+Q
Sbjct: 186 IRVNRHPKNHPKATHDSCSEGSCADEECGNVIFQLGVLMLELITGQSSDRQGNDLIEWVQ 245

Query: 240 ESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTK-DKPTISIPQISRYLQNEVDI 298
           +S I++SI +MIDPDLG +Y S+EL+K+LAVARLCIKT+ + P+ SI  + RYLQ ++D+
Sbjct: 246 DSCIANSIDKMIDPDLGNNYSSRELQKVLAVARLCIKTRYEPPSFSITHVYRYLQKKIDV 305

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297808203|ref|XP_002871985.1| kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297317822|gb|EFH48244.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 184/300 (61%), Positives = 237/300 (79%), Gaps = 4/300 (1%)

Query: 3   RLIRKFRRLLLSWLHRSRSGPKCFIRRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQDG 62
           R  R+ R LLL+WL RSRSG   FIRRF YK+I  AT GF +++Y+N HG+AY+A+F+ G
Sbjct: 6   RFSRRIRFLLLAWLRRSRSGRIEFIRRFGYKEIIKATQGFRKVIYSNYHGSAYRAKFKGG 65

Query: 63  EVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKEH 122
           EVALVKE+ AL+L ++ F  E+QLLGRL HRHLL L+GF  GRKRLLVFDNIENGSLKEH
Sbjct: 66  EVALVKELNALDLGRERFDEEVQLLGRLRHRHLLTLRGFCIGRKRLLVFDNIENGSLKEH 125

Query: 123 LNDPLKTPLDWKTRLQIAIGVAAALEYLLLFS--NLPMYYVSISSSSIMLDENFTAKLSD 180
           LNDPLKTPL+WKTR+QIAIGVAAALEYLL+FS  +  +Y VS++S +IMLDENFT K+SD
Sbjct: 126 LNDPLKTPLNWKTRIQIAIGVAAALEYLLIFSSNDAQIYDVSVNSCNIMLDENFTPKISD 185

Query: 181 VGFFNSVRNYATMPHSSCPE-DCSTQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQ 239
           +      +N+    H SC E  C+ ++C N+IFQLGVL+LEL+TGQS +    DLI+W+Q
Sbjct: 186 IRVNRHPKNHPKATHDSCSEGSCADEECGNVIFQLGVLMLELITGQSSDRQGKDLIEWVQ 245

Query: 240 ESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTK-DKPTISIPQISRYLQNEVDI 298
           +S I++SI +MIDPDLG +Y S+EL+K+LAVARLCIKT+ + P+ SI  + RYLQ ++D+
Sbjct: 246 DSCIANSIDKMIDPDLGNNYSSRELQKVLAVARLCIKTRYEPPSFSITHVYRYLQKKIDV 305

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356542062|ref|XP_003539490.1| PREDICTED: probable receptor-like protein kinase At1g49730-like [Glycine max]

 Score =  377 bits (968), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 190/307 (61%), Positives = 229/307 (74%), Gaps = 6/307 (1%)

Query: 1   MDRLIRKFRRLLLSWLHRSRSGPKCFIRRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQ 60
           MD  I K RR LL+W HRSRSG   F+RR SYKD++ ATDGFHR++Y+NS  +AY A+F 
Sbjct: 1   MDPFIHKLRRHLLAWFHRSRSGAVFFVRRISYKDVRRATDGFHRVLYSNSEVSAYAAKFG 60

Query: 61  DGEVA-LVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGR--KRLLVFDNIENG 117
           DG  A LV+E++  +   D FYR +Q LGRL HRHLL+L+GFS GR  KRLL+FDNIENG
Sbjct: 61  DGGGACLVREVKGFDEGNDDFYRHVQFLGRLRHRHLLSLRGFSVGRNHKRLLIFDNIENG 120

Query: 118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAK 177
           SLK+HLNDPLKTPLDW+TRLQIA GV AALEYL LFS+ P+ +VSI+SS+IMLDENFTAK
Sbjct: 121 SLKDHLNDPLKTPLDWRTRLQIANGVVAALEYLFLFSDPPVCHVSITSSNIMLDENFTAK 180

Query: 178 LSDVGFFNSVRNYATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDL 234
           LSD G   SV  +        P   ++   Q    IIFQLGVLILELVTGQS E    DL
Sbjct: 181 LSDFGLLTSVLTFCCFTFMCSPSSSTSDLKQKSCKIIFQLGVLILELVTGQSSEMEGSDL 240

Query: 235 IQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQN 294
           I+WIQES   +SI +MIDPDLG +YD  ELK LLAVA+LCIK+ DKP+ +IPQ+ R+LQ 
Sbjct: 241 IEWIQESRFYNSIDKMIDPDLGNNYDCTELKSLLAVAKLCIKSWDKPSFTIPQLFRHLQK 300

Query: 295 EVDIQCY 301
           ++DI  Y
Sbjct: 301 KIDISNY 307

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444823|ref|XP_004140173.1| PREDICTED: probable receptor-like protein kinase At1g49730-like [Cucumis sativus]

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 187/302 (61%), Positives = 235/302 (77%), Gaps = 3/302 (0%)

Query: 1   MDRLIRKFRRLLLSWLHRSRSGPKCFIRRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQ 60
           MD  I +FR  LL+W HRSRS P  ++RRFSYK+IK AT GF+R+VYTN   AAY A+FQ
Sbjct: 29  MDPWIHRFRHRLLAWFHRSRSVPILYVRRFSYKEIKRATGGFNRVVYTNPRSAAYNAKFQ 88

Query: 61  DGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSL 119
           DG VALVKE +ALN   + FY E+QLLGRLHHRHLL L+GFST G KRLLVFD I NGSL
Sbjct: 89  DGRVALVKEQRALN--DNLFYTEVQLLGRLHHRHLLTLRGFSTAGHKRLLVFDEIGNGSL 146

Query: 120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLS 179
           ++ LNDPL+TPL+W+ RLQIA GVAAALEYLLLF++ PM +VSISSS+IMLDENFTAK+S
Sbjct: 147 RDLLNDPLRTPLNWRMRLQIAAGVAAALEYLLLFTHPPMCHVSISSSTIMLDENFTAKIS 206

Query: 180 DVGFFNSVRNYATMPHSSCPEDCSTQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQ 239
           DVGF  S  N      ++  +D   +   NII+QLGVLILEL+TGQS +    DLI+WIQ
Sbjct: 207 DVGFLCSPVNITGYSDATKSDDFVDEKSGNIIYQLGVLILELITGQSSDGTGADLIKWIQ 266

Query: 240 ESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQ 299
            ++ + S+++MIDPDLG S+D K+++ LL+VA+LCIK+++KP  SI QI RYLQ++VD+ 
Sbjct: 267 GTNFARSMNKMIDPDLGNSFDYKDVRNLLSVAKLCIKSREKPRFSIAQIFRYLQSKVDLS 326

Query: 300 CY 301
            Y
Sbjct: 327 SY 328

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30688287|ref|NP_851053.1| protein kinase family protein [Arabidopsis thaliana] gi|13374864|emb|CAC34498.1| somatic embryogenesis receptor-like kinase-like protein [Arabidopsis thaliana] gi|332005592|gb|AED92975.1| protein kinase family protein [Arabidopsis thaliana]

 Score =  361 bits (926), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 181/300 (60%), Positives = 232/300 (77%), Gaps = 12/300 (4%)

Query: 3   RLIRKFRRLLLSWLHRSRSGPKCFIRRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQDG 62
           RL R+ R LLL+WL RSRSG   FIRRF YK+I  AT+GF +++YTN HG+AY+A+F+ G
Sbjct: 6   RLSRRIRFLLLAWLRRSRSGRIEFIRRFGYKEIIKATEGFRKVIYTNYHGSAYRAKFKGG 65

Query: 63  EVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKEH 122
           EVALVKE+ AL+L ++ F  E+QLLGRL HRHLL L+GF  GRKRLLVFDNIENGSLKEH
Sbjct: 66  EVALVKELTALDLGRERFDEEVQLLGRLRHRHLLTLRGFCIGRKRLLVFDNIENGSLKEH 125

Query: 123 LNDPLKTPLDWKTRLQIAIGVAAALEYLLLFS--NLPMYYVSISSSSIMLDENFTAKLS- 179
           LNDPLKTPL+WKTR+QIAIGVAAALEYLL+FS  +  +Y VS++S +IMLDENFT K+S 
Sbjct: 126 LNDPLKTPLNWKTRIQIAIGVAAALEYLLVFSSNDAQIYDVSVNSCNIMLDENFTPKISA 185

Query: 180 DVGFFNSVRNYATMPHSSCPEDCSTQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQ 239
                 ++R          P     ++C N+IFQLGVL+LEL+TGQS +    DLI+W+Q
Sbjct: 186 STDIQKTIRKQ--------PMILVLKECGNVIFQLGVLMLELITGQSSDRQGNDLIEWVQ 237

Query: 240 ESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTK-DKPTISIPQISRYLQNEVDI 298
           +S I++SI +MIDPDLG +Y S+EL+K+LAVARLCIKT+ + P+ SI  + RYLQ ++D+
Sbjct: 238 DSCIANSIDKMIDPDLGNNYSSRELQKVLAVARLCIKTRYEPPSFSITHVYRYLQKKIDV 297

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357453285|ref|XP_003596919.1| Wall-associated receptor kinase-like protein [Medicago truncatula] gi|355485967|gb|AES67170.1| Wall-associated receptor kinase-like protein [Medicago truncatula]

 Score =  346 bits (888), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 189/330 (57%), Positives = 224/330 (67%), Gaps = 41/330 (12%)

Query: 1   MDRLIRKFRRLLLSWLHRSRSGPKCFIRRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQ 60
           MD LIRKFRR +L WLHRSRSG   F+RR SYK+++ ATD F RIVY+NS  +AY A F 
Sbjct: 1   MDPLIRKFRRHILHWLHRSRSGSVFFVRRISYKEVRKATDSFQRIVYSNSEVSAYAANFG 60

Query: 61  DGEVALVKEIQALNLEKDA-FYREIQLLGRLHHRHLLALQGFSTGR----KRLLVFDNIE 115
           D  V LVKE++  +   D  F+R++QLLGRLHHRHLL+L+GFS G     KRLL+FDNI+
Sbjct: 61  DSGVCLVKELKDFDKGNDENFHRQVQLLGRLHHRHLLSLKGFSLGHDRKSKRLLIFDNID 120

Query: 116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFT 175
           NGSLKEHLNDPLKTPL+W+TRLQIA GV AALEYL LFS  P+ +VSISSS+IMLDENFT
Sbjct: 121 NGSLKEHLNDPLKTPLNWRTRLQIANGVVAALEYLFLFSEPPISHVSISSSNIMLDENFT 180

Query: 176 AKLSDVGFFNSVRNYATMPHSSC---------------PED------------CSTQDCS 208
            K         VR Y  + H +                P +            C   +  
Sbjct: 181 PK---------VRKYFPLSHYNVSYLIDHFQIYLILALPVEVRRHIHKVTSLYCMGPESC 231

Query: 209 NIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL 268
            IIFQLGVLILELVTGQS E    DLI+WIQES   SSI +M+DPDLG SY+  ELK LL
Sbjct: 232 KIIFQLGVLILELVTGQSSEMEGSDLIEWIQESRFFSSIDKMLDPDLGNSYEYTELKSLL 291

Query: 269 AVARLCIKTKDKPTISIPQISRYLQNEVDI 298
           AVA+LCIK+ DKP+ +I Q+ RYLQ E DI
Sbjct: 292 AVAKLCIKSWDKPSYTILQLFRYLQKETDI 321

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	309
TAIR|locus:504956438	307	AT5G22050 [Arabidopsis thalian	0.883	0.889	0.548	3.4e-77
TAIR|locus:2090634	663	AT3G19300 [Arabidopsis thalian	0.873	0.407	0.307	9.2e-31
TAIR|locus:2012191	693	AT1G49730 [Arabidopsis thalian	0.857	0.382	0.328	2.1e-29
TAIR|locus:2139559	437	AT4G34500 [Arabidopsis thalian	0.851	0.601	0.287	1.1e-22
TAIR|locus:2075517	558	AT3G02810 [Arabidopsis thalian	0.640	0.354	0.286	1.5e-22
TAIR|locus:2089210	687	SRF4 "STRUBBELIG-receptor fami	0.834	0.375	0.273	3.4e-21
TAIR|locus:2128625	898	AT4G20450 [Arabidopsis thalian	0.860	0.296	0.261	7.1e-21
TAIR|locus:2162212	681	AT5G55830 [Arabidopsis thalian	0.873	0.396	0.287	1.9e-20
TAIR|locus:2061466	634	AT2G23950 [Arabidopsis thalian	0.844	0.411	0.290	2.1e-20
TAIR|locus:2038992	744	ALE2 "Abnormal Leaf Shape 2" [	0.792	0.329	0.266	2.9e-20

TAIR|locus:504956438 AT5G22050 [Arabidopsis thaliana (taxid:3702)]

 Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
 Identities = 152/277 (54%), Positives = 197/277 (71%)

Query:    26 FIRRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIX 85
             FIRRF YK+I  AT+GF +++YTN HG+AY+A+F+ GEVALVKE+ AL+L ++ F  E+ 
Sbjct:    29 FIRRFGYKEIIKATEGFRKVIYTNYHGSAYRAKFKGGEVALVKELTALDLGRERFDEEVQ 88

Query:    86 XXXXXXXXXXXXXXXFSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAA 145
                            F  GRKRLLVFDNIENGSLKEHLNDPLKTPL+WKTR+QIAIGVAA
Sbjct:    89 LLGRLRHRHLLTLRGFCIGRKRLLVFDNIENGSLKEHLNDPLKTPLNWKTRIQIAIGVAA 148

Query:   146 ALEYLLLFSN--LPMYYVXXXXXXXMLDENFTAKLSDVGFFNSVRNYATMPHSSCPE-DC 202
             ALEYLL+FS+    +Y V       MLDENFT K+SD+      +N+    H SC E  C
Sbjct:   149 ALEYLLVFSSNDAQIYDVSVNSCNIMLDENFTPKISDIRVNRHPKNHPKATHDSCSEGSC 208

Query:   203 STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQEXXXXXXXHRMIDPDLGGSYDSK 262
             + ++C N+IFQLGVL+LEL+TGQS +    DLI+W+Q+        +MIDPDLG +Y S+
Sbjct:   209 ADEECGNVIFQLGVLMLELITGQSSDRQGNDLIEWVQDSCIANSIDKMIDPDLGNNYSSR 268

Query:   263 ELKKLLAVARLCIKTK-DKPTISIPQISRYLQNEVDI 298
             EL+K+LAVARLCIKT+ + P+ SI  + RYLQ ++D+
Sbjct:   269 ELQKVLAVARLCIKTRYEPPSFSITHVYRYLQKKIDV 305

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2090634 AT3G19300 [Arabidopsis thaliana (taxid:3702)]

 Score = 346 (126.9 bits), Expect = 9.2e-31, P = 9.2e-31
 Identities = 88/286 (30%), Positives = 149/286 (52%)

Query:    28 RRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLE-KDAFYREIXX 86
             R+FSYK+I+ AT+ F+ ++     G  YKA F +G VA VK++   + + +D F REI  
Sbjct:   314 RKFSYKEIRKATEDFNAVIGRGGFGTVYKAEFSNGLVAAVKKMNKSSEQAEDEFCREIEL 373

Query:    87 XXXXXXXXXXXXXXFSTGR-KRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAA 145
                           F   + +R LV++ +ENGSLK+HL+   K+PL W++R++IAI VA 
Sbjct:   374 LARLHHRHLVALKGFCNKKNERFLVYEYMENGSLKDHLHSTEKSPLSWESRMKIAIDVAN 433

Query:   146 ALEYLLLFSNLPMYYVXXXXXXXMLDENFTAKLSDVGFFNSVRNYATM-----------P 194
             ALEYL  + + P+ +        +LDE+F AKL+D G  ++ R+ +             P
Sbjct:   434 ALEYLHFYCDPPLCHRDIKSSNILLDEHFVAKLADFGLAHASRDGSICFEPVNTDIRGTP 493

Query:   195 HSSCPEDCSTQDCS--NIIFQLGVLILELVTGQSPEEGDVDLIQWIQEXXXXXXXH-RMI 251
                 PE   T + +  + ++  GV++LE++TG+   +   +L++  Q           ++
Sbjct:   494 GYVDPEYVVTHELTEKSDVYSYGVVLLEIITGKRAVDEGRNLVELSQPLLVSESRRIDLV 553

Query:   252 DPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVD 297
             DP +    D ++L+ ++AV R C + +     SI Q+ R L    D
Sbjct:   554 DPRIKDCIDGEQLETVVAVVRWCTEKEGVARPSIKQVLRLLYESCD 599

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2012191 AT1G49730 [Arabidopsis thaliana (taxid:3702)]

 Score = 334 (122.6 bits), Expect = 2.1e-29, P = 2.1e-29
 Identities = 93/283 (32%), Positives = 144/283 (50%)

Query:    28 RRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQDGEVALVKEIQALN--LEKDAFYREIX 85
             R+FSYK++  AT+ F+ ++     G  YKA F DG +A VK++  ++   E+D F REI 
Sbjct:   345 RKFSYKEMTNATNDFNTVIGQGGFGTVYKAEFNDGLIAAVKKMNKVSEQAEQD-FCREIG 403

Query:    86 XXXXXXXXXXXXXXXFSTGRK-RLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVA 144
                            F   +K R LV+D ++NGSLK+HL+   K P  W TR++IAI VA
Sbjct:   404 LLAKLHHRNLVALKGFCINKKERFLVYDYMKNGSLKDHLHAIGKPPPSWGTRMKIAIDVA 463

Query:   145 AALEYLLLFSNLPMYYVXXXXXXXMLDENFTAKLSDVGFFNSVRNYATM----------- 193
              ALEYL  + + P+ +        +LDENF AKLSD G  +S R+ +             
Sbjct:   464 NALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLSDFGLAHSSRDGSVCFEPVNTDIRGT 523

Query:   194 PHSSCPEDCSTQDCS--NIIFQLGVLILELVTGQSPEEGDVDLIQWIQEXXXXXXXH-RM 250
             P    PE   TQ+ +  + ++  GV++LEL+TG+   +   +L++  Q        H  +
Sbjct:   524 PGYVDPEYVVTQELTEKSDVYSYGVVLLELITGRRAVDEGRNLVEMSQRFLLAKSKHLEL 583

Query:   251 IDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQ 293
             +DP +  S +    K+L AV  +     +K   S P I + L+
Sbjct:   584 VDPRIKDSINDAGGKQLDAVVTVVRLCTEKEGRSRPSIKQVLR 626

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2139559 AT4G34500 [Arabidopsis thaliana (taxid:3702)]

 Score = 266 (98.7 bits), Expect = 1.1e-22, P = 1.1e-22
 Identities = 84/292 (28%), Positives = 137/292 (46%)

Query:    30 FSYKDIKMATDGFH--RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDA---FYREI 84
             +S KD+++AT GF    ++    +G  Y+A F DG VA VK +  LN +  A   F  E+
Sbjct:   133 YSLKDLEIATRGFSDDNMIGEGGYGVVYRADFSDGSVAAVKNL--LNNKGQAEKEFKVEV 190

Query:    85 XXXXXXXXXXXXXXXXF---STGRKRLLVFDNIENGSLKEHLNDPLK--TPLDWKTRLQI 139
                             +   S   +R+LV++ I+NG+L++ L+  +   +PL W  R++I
Sbjct:   191 EAIGKVRHKNLVGLMGYCADSAQSQRMLVYEYIDNGNLEQWLHGDVGPVSPLTWDIRMKI 250

Query:   140 AIGVAAALEYLLLFSNLPMYYVXXXXXXXMLDENFTAKLSDVGF---FNSVRNYATMPHS 196
             AIG A  L YL       + +        +LD+ + AK+SD G      S  +Y T    
Sbjct:   251 AIGTAKGLAYLHEGLEPKVVHRDVKSSNILLDKKWNAKVSDFGLAKLLGSETSYVTTRVM 310

Query:   197 SC-----PEDCST---QDCSNIIFQLGVLILELVTGQSPEE-----GDVDLIQWIQEXXX 243
                    PE  ST    +CS++ +  GVL++E++TG+SP +     G+++L+ W +    
Sbjct:   311 GTFGYVSPEYASTGMLNECSDV-YSFGVLLMEIITGRSPVDYSRPPGEMNLVDWFKGMVA 369

Query:   244 XXXXHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNE 295
                   +IDP +  S   + LK+ L V   CI         + QI   L+ E
Sbjct:   370 SRRGEEVIDPKIKTSPPPRALKRALLVCLRCIDLDSSKRPKMGQIIHMLEAE 421

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2075517 AT3G02810 [Arabidopsis thaliana (taxid:3702)]

 Score = 209 (78.6 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
 Identities = 63/220 (28%), Positives = 107/220 (48%)

Query:    27 IRRFSYKDIKMATDGFHR--IVYTNSHGAAYKARFQD-GEVALVKEIQALNLEKDA-FYR 82
             ++ F+++++  AT  F +  ++     G  YK   +  G+V  VK++    L  +  F  
Sbjct:    49 LKIFTFRELATATKNFRQECLLGEGGFGRVYKGTLKSTGQVVAVKQLDKHGLHGNKEFQA 108

Query:    83 EIXXXXXXXXXXXXXXXXF-STGRKRLLVFDNIENGSLKEHLNDPL--KTPLDWKTRLQI 139
             E+                + + G +RLLV+D I  GSL++HL++P     P+DW TR+QI
Sbjct:   109 EVLSLGQLDHPNLVKLIGYCADGDQRLLVYDYISGGSLQDHLHEPKADSDPMDWTTRMQI 168

Query:   140 AIGVAAALEYLLLFSNLPMYYVXXXXXXXMLDENFTAKLSDVGFFN------------SV 187
             A   A  L+YL   +N P+ Y        +LD++F+ KLSD G               S 
Sbjct:   169 AYAAAQGLDYLHDKANPPVIYRDLKASNILLDDDFSPKLSDFGLHKLGPGTGDKMMALSS 228

Query:   188 RNYATMPHSSCPEDCSTQDCS--NIIFQLGVLILELVTGQ 225
             R   T  +S+ PE     + +  + ++  GV++LEL+TG+
Sbjct:   229 RVMGTYGYSA-PEYTRGGNLTLKSDVYSFGVVLLELITGR 267

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2089210 SRF4 "STRUBBELIG-receptor family 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 258 (95.9 bits), Expect = 3.4e-21, P = 3.4e-21
 Identities = 76/278 (27%), Positives = 129/278 (46%)

Query:    27 IRRFSYKDIKMATDGF--HRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEK---DAFY 81
             ++ FS  D++     F  +R++   + G  YKA+FQDG    VKEI +  L K   + F 
Sbjct:   400 VKAFSLADLQNTASCFSPNRLLGEGTIGRVYKAKFQDGRKFAVKEIDSSLLGKGNPEEFS 459

Query:    82 REIXXXXXXXXXXXXXXXXFSTGRKR-LLVFDNIENGSLKE--HLNDPLKTPLDWKTRLQ 138
               +                + + + R +LV++   +GSL    HL+D    PL W TR++
Sbjct:   460 HIVSSISSIHHKNMAELVGYCSEQGRNMLVYEYFTSGSLHRFLHLSDDFSKPLTWNTRIR 519

Query:   139 IAIGVAAALEYLLLFSNLPMYYVXXXXXXXMLDENFTAKLSDVGFFN-SVRNYATMPHS- 196
             IA+G A A+EYL    + P+ +        +LD     +LSD G  N   R    +    
Sbjct:   520 IALGTAKAIEYLHETCSPPLVHKNIKSSNILLDNELNPRLSDYGLANFHHRTSQNLGVGY 579

Query:   197 SCPE--DCSTQDCSNIIFQLGVLILELVTGQSP-EEG----DVDLIQWIQ-EXXXXXXXH 248
             + PE  D S     + ++  GV++LEL+TG+ P + G    +  L++W + +        
Sbjct:   580 NAPECTDPSAYTQKSDVYSFGVVMLELLTGRKPYDSGRPKAEQSLVRWAKPQLKDMDTLD 639

Query:   249 RMIDPDLGGSYDSKELKKLLAVARLCIKTKD--KPTIS 284
              M+DP L G Y  + +     +  +C+ T+   +P +S
Sbjct:   640 EMVDPALCGLYAPESVSSFADIVSICVMTEPGLRPPVS 677

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2128625 AT4G20450 [Arabidopsis thaliana (taxid:3702)]

 Score = 257 (95.5 bits), Expect = 7.1e-21, P = 7.1e-21
 Identities = 74/283 (26%), Positives = 124/283 (43%)

Query:    28 RRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEK-DAFYREIXX 86
             R ++Y+++ + T+ F R +     G  Y     D E   VK +   + +    F  E+  
Sbjct:   579 RSYTYEEVAVITNNFERPLGEGGFGVVYHGNVNDNEQVAVKVLSESSAQGYKQFKAEVDL 638

Query:    87 XXXXXXXXXXXXXXF-STGRKRLLVFDNIENGSLKEHLN-DPLKTPLDWKTRLQIAIGVA 144
                           +   G+  +L+++ + NG+LK+HL+ +  ++PL W+ RL+IA   A
Sbjct:   639 LLRVHHINLVTLVGYCDEGQHLVLIYEYMSNGNLKQHLSGENSRSPLSWENRLRIAAETA 698

Query:   145 AALEYLLLFSNLPMYYVXXXXXXXMLDENFTAKLSDVGFFNSV---------RNYATMPH 195
               LEYL +    PM +        +LD NF AKL D G   S           N A  P 
Sbjct:   699 QGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSETHVSTNVAGSPG 758

Query:   196 SSCPEDCSTQDCS--NIIFQLGVLILELVTGQS--PEEGDVDLI-QWIQEXXXXXXXHRM 250
                PE   T   +  + +F  GV++LE++T Q    +  +   I +W+           +
Sbjct:   759 YLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVIDQTREKSHIGEWVGFKLTNGDIKNI 818

Query:   251 IDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQ 293
             +DP + G YDS  L K L +A  C+        ++ Q++  LQ
Sbjct:   819 VDPSMNGDYDSSSLWKALELAMSCVSPSSSGRPNMSQVANELQ 861

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2162212 AT5G55830 [Arabidopsis thaliana (taxid:3702)]

 Score = 251 (93.4 bits), Expect = 1.9e-20, P = 1.9e-20
 Identities = 85/296 (28%), Positives = 130/296 (43%)

Query:    27 IRRFSYKDIKMATDGFH--RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLE-KDAFYR 82
             +R FSYK++  AT GFH  R++   + G  Y+A F   G ++ VK  +  + E K  F  
Sbjct:   350 LREFSYKELYTATKGFHSSRVIGRGAFGNVYRAMFVSSGTISAVKRSRHNSTEGKTEFLA 409

Query:    83 EIXXXXXXXXXXXXXXXXFSTGR-KRLLVFDNIENGSLKEHLNDPLKT---PLDWKTRLQ 138
             E+                +   + + LLV++ + NGSL + L    +T    LDW  RL 
Sbjct:   410 ELSIIACLRHKNLVQLQGWCNEKGELLLVYEFMPNGSLDKILYQESQTGAVALDWSHRLN 469

Query:   139 IAIGVAAALEYLLLFSNLPMYYVXXXXXXXMLDENFTAKLSDVGFFN---------SVRN 189
             IAIG+A+AL YL       + +        MLD NF A+L D G            S   
Sbjct:   470 IAIGLASALSYLHHECEQQVVHRDIKTSNIMLDINFNARLGDFGLARLTEHDKSPVSTLT 529

Query:   190 YATMPHSSCPE--DCSTQDCSNIIFQLGVLILELVTGQSPEEGD------VDLIQWIQEX 241
               TM + + PE     T       F  GV+ILE+  G+ P + +      V+L+ W+   
Sbjct:   530 AGTMGYLA-PEYLQYGTATEKTDAFSYGVVILEVACGRRPIDKEPESQKTVNLVDWVWRL 588

Query:   242 XXXXXXHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVD 297
                      +D  L G +D + +KKLL V   C         S+ ++ + L NE++
Sbjct:   589 HSEGRVLEAVDERLKGEFDEEMMKKLLLVGLKCAHPDSNERPSMRRVLQILNNEIE 644

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000226 "microtubule cytoskeleton organization" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

TAIR|locus:2061466 AT2G23950 [Arabidopsis thaliana (taxid:3702)]

 Score = 250 (93.1 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 84/289 (29%), Positives = 138/289 (47%)

Query:    27 IRRFSYKDIKMATDGFHR--IVYTNSHGAAYKARFQDGEVALVKEIQALN--LEKDAFYR 82
             +R F+++++ +ATDGF    I+     G  Y+ +F DG V  VK ++ +N       F  
Sbjct:   284 LRSFTFRELHVATDGFSSKSILGAGGFGNVYRGKFGDGTVVAVKRLKDVNGTSGNSQFRT 343

Query:    83 EIXXXXXXXXXXXXXXXXF-STGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAI 141
             E+                + ++  +RLLV+  + NGS+   L    K  LDW TR +IAI
Sbjct:   344 ELEMISLAVHRNLLRLIGYCASSSERLLVYPYMSNGSVASRLK--AKPALDWNTRKKIAI 401

Query:   142 GVAAALEYLLLFSNLPMYYVXXXXXXXMLDENFTAKLSDVGF---FNSVRNYAT------ 192
             G A  L YL    +  + +        +LDE F A + D G     N   ++ T      
Sbjct:   402 GAARGLFYLHEQCDPKIIHRDVKAANILLDEYFEAVVGDFGLAKLLNHEDSHVTTAVRGT 461

Query:   193 MPHSSCPEDCSTQDCSNI--IFQLGVLILELVTG-QSPEEG-DVD----LIQWIQEXXXX 244
             + H + PE  ST   S    +F  G+L+LEL+TG ++ E G  V     +++W+++    
Sbjct:   462 VGHIA-PEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSVSQKGAMLEWVRKLHKE 520

Query:   245 XXXHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQ 293
                  ++D +LG +YD  E+ ++L VA LC  T+  P    P++S  +Q
Sbjct:   521 MKVEELVDRELGTTYDRIEVGEMLQVALLC--TQFLPAHR-PKMSEVVQ 566

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010075 "regulation of meristem growth" evidence=RCA

TAIR|locus:2038992 ALE2 "Abnormal Leaf Shape 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 250 (93.1 bits), Expect = 2.9e-20, P = 2.9e-20
 Identities = 72/270 (26%), Positives = 127/270 (47%)

Query:    27 IRRFSYKDIKMATDGFH--RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDA-FYRE 83
             ++ F+  +++ ATD F   R++     G  Y+   +DG    VK +   N  +D  F  E
Sbjct:   334 VKTFTLSELEKATDRFSAKRVLGEGGFGRVYQGSMEDGTEVAVKLLTRDNQNRDREFIAE 393

Query:    84 IXXXXXXXXXXXXXXXXFST-GRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIG 142
             +                    GR R L+++ + NGS++ HL++     LDW  RL+IA+G
Sbjct:   394 VEMLSRLHHRNLVKLIGICIEGRTRCLIYELVHNGSVESHLHEGT---LDWDARLKIALG 450

Query:   143 VAAALEYLLLFSNLPMYYVXXXXXXXMLDENFTAKLSDVGFFN---------SVRNYATM 193
              A  L YL   SN  + +        +L+++FT K+SD G            S R   T 
Sbjct:   451 AARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSQHISTRVMGTF 510

Query:   194 PHSSCPEDCSTQDC--SNIIFQLGVLILELVTGQSPEE-----GDVDLIQWIQEXXXXXX 246
              + + PE   T      + ++  GV++LEL+TG+ P +     G+ +L+ W +       
Sbjct:   511 GYVA-PEYAMTGHLLVKSDVYSYGVVLLELLTGRRPVDMSQPSGEENLVTWARPLLANRE 569

Query:   247 X-HRMIDPDLGGSYDSKELKKLLAVARLCI 275
                +++DP L G+Y+  ++ K+ A+A +C+
Sbjct:   570 GLEQLVDPALAGTYNFDDMAKVAAIASMCV 599

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS;IDA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010068 "protoderm histogenesis" evidence=IMP

GO:0042335 "cuticle development" evidence=IMP

GO:0048367 "shoot system development" evidence=IGI

GO:0048645 "organ formation" evidence=IMP

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0042545 "cell wall modification" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.I.569.1 hypothetical protein (272 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	309
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-16
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	1e-15
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	1e-14
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	6e-13
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-12
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-12
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	4e-11
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	1e-09
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-09
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-08
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	5e-08
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	2e-07
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	2e-07
PHA02988	283	PHA02988, PHA02988, hypothetical protein; Provisio	3e-07
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	4e-06
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	2e-05
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	2e-05
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-05
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	3e-05
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	3e-05
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	4e-05
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	5e-05
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	8e-05
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	1e-04
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	1e-04
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	1e-04
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	1e-04
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	1e-04
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	2e-04
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	2e-04
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	2e-04
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	3e-04
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	4e-04
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	4e-04
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	6e-04
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	6e-04
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	7e-04
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	0.001
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	0.001
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	0.001
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	0.001
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	0.001
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	0.002
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	0.002
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	0.003
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	0.003
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	0.003
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	0.004

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 77.2 bits (191), Expect = 2e-16
 Identities = 63/273 (23%), Positives = 125/273 (45%), Gaps = 56/273 (20%)

Query: 55  YKARFQDG-----EVALVKEIQ--ALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKR 107
           YK + +       EVA VK ++  A   E+  F +E +++ +L H +++ L G  T  + 
Sbjct: 12  YKGKLKGKDGKTTEVA-VKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEP 70

Query: 108 L-LVFDNIENGSLKEHL-------NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMY 159
           L LV + +E G L ++L         P K+ L  K  L  AI +A  +EYL   ++    
Sbjct: 71  LYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYL---ASKKFV 127

Query: 160 YVSISSSSIMLDENFTAKLSDVGF--FNSVRNYATMPHSSC-------PE-----DCSTQ 205
           +  +++ + ++ E+   K+SD G        +Y               PE       +++
Sbjct: 128 HRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSK 187

Query: 206 DCSNIIFQLGVLILELVT-GQSPEEG--DVDLIQWIQESSISSSIHRMIDPDLGGSYDSK 262
             S+ ++  GVL+ E+ T G +P  G  + ++++++++       +R+  P+    Y   
Sbjct: 188 --SD-VWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKG------YRLPKPE----YCPD 234

Query: 263 ELKKLLAVARLC--IKTKDKPTISIPQISRYLQ 293
           EL +L+     C  +  +D+PT S  ++   L+
Sbjct: 235 ELYELM---LSCWQLDPEDRPTFS--ELVERLE 262

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 74.2 bits (183), Expect = 1e-15
 Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 19/187 (10%)

Query: 50  SHGAAYKAR-FQDGEVALVKEI--QALNLEKDAFYREIQLLGRLHHRHLLALQG-FSTGR 105
             G  Y AR  + G+   +K I  +  +   +   REI++L +L+H +++ L G F    
Sbjct: 5   GFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDEN 64

Query: 106 KRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISS 165
              LV +  E GSLK+ L +  +  L     L+I + +   LEYL    +  + +  +  
Sbjct: 65  HLYLVMEYCEGGSLKDLLKE-NEGKLSEDEILRILLQILEGLEYL---HSNGIIHRDLKP 120

Query: 166 SSIMLDE-NFTAKLSDVGFFNSVRNYATMPHSSC-------PE---DCSTQDCSNIIFQL 214
            +I+LD  N   KL+D G    + +  ++  +         PE           + I+ L
Sbjct: 121 ENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSL 180

Query: 215 GVLILEL 221
           GV++ EL
Sbjct: 181 GVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 71.8 bits (177), Expect = 1e-14
 Identities = 42/195 (21%), Positives = 88/195 (45%), Gaps = 22/195 (11%)

Query: 63  EVALVKEIQ--ALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRL-LVFDNIENGSL 119
           EVA VK ++  A   + + F RE +++ +L H +++ L G  T  + L +V + +  G L
Sbjct: 30  EVA-VKTLKEDASEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMPGGDL 88

Query: 120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLS 179
            ++L       L     L  A+ +A  +EYL    +    +  +++ + ++ EN   K+S
Sbjct: 89  LDYLRKNRPKELSLSDLLSFALQIARGMEYL---ESKNFIHRDLAARNCLVGENLVVKIS 145

Query: 180 DVGFFNSVRNYATMPHSSC--------PEDCSTQDCSNI---IFQLGVLILELVT-GQSP 227
           D G    + +                 PE    +        ++  GVL+ E+ T G+ P
Sbjct: 146 DFGLSRDLYDDDYYKVKGGKLPIRWMAPE-SLKEGKFTSKSDVWSFGVLLWEIFTLGEEP 204

Query: 228 EEG--DVDLIQWIQE 240
             G  + ++++++++
Sbjct: 205 YPGMSNAEVLEYLKK 219

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 67.2 bits (165), Expect = 6e-13
 Identities = 43/195 (22%), Positives = 88/195 (45%), Gaps = 23/195 (11%)

Query: 63  EVALVKEIQ--ALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRL-LVFDNIENGSL 119
           EVA VK ++  A   + + F RE +++ +L H +++ L G  T  + L +V + +E G L
Sbjct: 30  EVA-VKTLKEDASEQQIEEFLREARIMRKLDHPNVVKLLGVCTEEEPLYIVMEYMEGGDL 88

Query: 120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLS 179
             +L    +  L     L  A+ +A  +EYL    +    +  +++ + ++ EN   K+S
Sbjct: 89  LSYLRKN-RPKLSLSDLLSFALQIARGMEYL---ESKNFIHRDLAARNCLVGENLVVKIS 144

Query: 180 DVGFFNSVRNYATMPHSSC--------PEDCSTQDCSNI---IFQLGVLILELVT-GQSP 227
           D G    + +                 PE    +        ++  GVL+ E+ T G+ P
Sbjct: 145 DFGLSRDLYDDDYYRKRGGKLPIRWMAPE-SLKEGKFTSKSDVWSFGVLLWEIFTLGEQP 203

Query: 228 EEG--DVDLIQWIQE 240
             G  + +++++++ 
Sbjct: 204 YPGMSNEEVLEYLKN 218

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 65.6 bits (161), Expect = 2e-12
 Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 8/126 (6%)

Query: 60  QDGEVALVKEI--QALNLEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIEN 116
            + +VA VK +   A   E++ F  E  ++ +L H +++ L G  T G    +V + +  
Sbjct: 27  TETKVA-VKTLKEGASEEEREEFLEEASIMKKLSHPNIVRLLGVCTQGEPLYIVTEYMPG 85

Query: 117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTA 176
           G L + L       L  K  LQ+A+ +A  +EYL    +    +  +++ + ++ EN   
Sbjct: 86  GDLLDFLRKH-GEKLTLKDLLQMALQIAKGMEYL---ESKNFVHRDLAARNCLVTENLVV 141

Query: 177 KLSDVG 182
           K+SD G
Sbjct: 142 KISDFG 147

Length = 258

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 65.0 bits (159), Expect = 3e-12
 Identities = 63/253 (24%), Positives = 105/253 (41%), Gaps = 35/253 (13%)

Query: 52  GAAYKARFQDG--EVALVKEI---QALNLEKDAFYREIQLLGRLHHRHLLALQG-FSTGR 105
           G  YKA+ +     VA VK +      + +     REI++L RL H +++ L   F    
Sbjct: 13  GTVYKAKHKGTGKIVA-VKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLIDAFEDKD 71

Query: 106 KRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISS 165
              LV +  E G L ++L+     PL      +IA+ +   LEYL    +  + +  +  
Sbjct: 72  HLYLVMEYCEGGDLFDYLSR--GGPLSEDEAKKIALQILRGLEYL---HSNGIIHRDLKP 126

Query: 166 SSIMLDENFTAKLSDVGFFNSVRNYATMPHSSC-------PE---DCSTQDCSNIIFQLG 215
            +I+LDEN   K++D G    +   ++   +         PE     +       ++ LG
Sbjct: 127 ENILLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLG 186

Query: 216 VLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYD-----SKELKKLLAV 270
           V++ EL+TG+ P  G+  L Q          I R++ P L          S+E K L+  
Sbjct: 187 VILYELLTGKPPFSGENILDQ-------LQLIRRILGPPLEFDEPKWSSGSEEAKDLIKK 239

Query: 271 ARLCIKTKDKPTI 283
             L      +PT 
Sbjct: 240 C-LNKDPSKRPTA 251

Length = 260

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 61.7 bits (150), Expect = 4e-11
 Identities = 45/191 (23%), Positives = 86/191 (45%), Gaps = 15/191 (7%)

Query: 52  GAAYKARFQDGEVALVKEIQALNLEK-DAFYREIQLLGRLHHRHLLALQGF-STGRKRLL 109
           G  ++  +++     +K +++ +L K   F +E+Q L RL H+HL++L    S G    +
Sbjct: 20  GEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYI 79

Query: 110 VFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIM 169
           + + +E GSL   L  P    L   + + +A  VA  + YL         +  +++ +I+
Sbjct: 80  ITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYL---EEQNSIHRDLAARNIL 136

Query: 170 LDENFTAKLSDVGFFNSVRNYATMPHSS-------CPEDCSTQDCSNI--IFQLGVLILE 220
           + E+   K++D G    ++    +            PE  S    S    ++  G+L+ E
Sbjct: 137 VGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYE 196

Query: 221 LVT-GQSPEEG 230
           + T GQ P  G
Sbjct: 197 MFTYGQVPYPG 207

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 58.7 bits (142), Expect = 1e-09
 Identities = 64/271 (23%), Positives = 120/271 (44%), Gaps = 35/271 (12%)

Query: 26  FIRRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQDGEVA-LVKEIQALNLEKDAFYREI 84
             +  +  DI  +      ++     GA+YK +     +  +VKEI  +N    +   + 
Sbjct: 679 VSKSITINDILSSLKE-ENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIAD- 736

Query: 85  QLLGRLHHRHLLALQGFSTGRK-RLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGV 143
             +G+L H +++ L G     K   L+ + IE  +L E L +     L W+ R +IAIG+
Sbjct: 737 --MGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN-----LSWERRRKIAIGI 789

Query: 144 AAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKL---------SDVGFFNSVRNYATMP 194
           A AL +L    +  +   ++S   I++D      L         +D   F S    A   
Sbjct: 790 AKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFISSAYVA--- 846

Query: 195 HSSCPEDCSTQDCS--NIIFQLGVLILELVTGQSPEEGDV----DLIQWIQESSISSSIH 248
               PE   T+D +  + I+  G++++EL+TG+SP + +      +++W +       + 
Sbjct: 847 ----PETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLD 902

Query: 249 RMIDPDLGG--SYDSKELKKLLAVARLCIKT 277
             IDP + G  S +  E+ +++ +A  C  T
Sbjct: 903 MWIDPSIRGDVSVNQNEIVEVMNLALHCTAT 933

Length = 968

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 57.1 bits (138), Expect = 2e-09
 Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 37/248 (14%)

Query: 50  SHGAAYKA-RFQDGEVALVKEIQALN---LEKDAFYREIQLLGRLHHRHLLA-LQGFSTG 104
           S G  +K  R  D  V  +K+I        E++    E ++L +L   +++   + F   
Sbjct: 12  SFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDK 71

Query: 105 RKRLLVFDNIENGSLKEHLNDPLKTPLD----WKTRLQIAIGVAAALEYLLLFSNLPMYY 160
            K  +V +  ENG L + L      PL     W+  +QI +G+A       L S   + +
Sbjct: 72  GKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLA------HLHSK-KILH 124

Query: 161 VSISSSSIMLDENFTAKLSDVGF---FNSVRNYA-TM---PHSSCPEDCSTQ--DCSNII 211
             I S ++ LD     K+ D+G     +   N+A T+   P+   PE C  +  +  + +
Sbjct: 125 RDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDV 184

Query: 212 FQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVA 271
           + LGV++ E  TG+ P + +        + ++   I R + P +   Y S++L +L+   
Sbjct: 185 WALGVVLYECCTGKHPFDAN-------NQGALILKIIRGVFPPVSQMY-SQQLAQLI--- 233

Query: 272 RLCIKTKD 279
             C+ TKD
Sbjct: 234 DQCL-TKD 240

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 54.1 bits (131), Expect = 2e-08
 Identities = 60/244 (24%), Positives = 104/244 (42%), Gaps = 40/244 (16%)

Query: 50  SHGAAYKARF-QDGEVALVKEIQALNLEKD--AFYREIQLLGRLHHRHLLALQG-FSTGR 105
           S G  Y AR  + G++  +K I+   ++KD     REI++L +L H +++ L   F    
Sbjct: 11  SFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYDVFEDED 70

Query: 106 KRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISS 165
           K  LV +  E G L + L    +  L           + +ALEYL    +  + +  +  
Sbjct: 71  KLYLVMEYCEGGDLFDLLKK--RGRLSEDEARFYLRQILSALEYL---HSKGIVHRDLKP 125

Query: 166 SSIMLDENFTAKLSDVGFFNSVRNYATMPHSSC-------PEDCSTQDCSNIIFQ----- 213
            +I+LDE+   KL+D G    +     +  +         PE         ++       
Sbjct: 126 ENILLDEDGHVKLADFGLARQLDPGEKL-TTFVGTPEYMAPE---------VLLGKGYGK 175

Query: 214 ------LGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKEL-KK 266
                 LGV++ EL+TG+ P  GD  L++  ++  I         P+   S ++K+L +K
Sbjct: 176 AVDIWSLGVILYELLTGKPPFPGDDQLLELFKK--IGKPKPPFPPPEWDISPEAKDLIRK 233

Query: 267 LLAV 270
           LL  
Sbjct: 234 LLVK 237

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 52.5 bits (127), Expect = 5e-08
 Identities = 64/258 (24%), Positives = 112/258 (43%), Gaps = 42/258 (16%)

Query: 50  SHGAAYKAR-FQDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQG-FSTG 104
           S G  Y  R   DG++ ++KEI   N+   E++    E+++L +L+H +++     F   
Sbjct: 12  SFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEK 71

Query: 105 RKRLLVFDNIENGSLKEHL------NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPM 158
            K  +V +  + G L + +        P          +Q+ +    AL+YL   S   +
Sbjct: 72  GKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCL----ALKYL--HSRK-I 124

Query: 159 YYVSISSSSIMLDENFTAKLSDVGF---FNSVRNYA-TM---PHSSCPEDCSTQDCSNI- 210
            +  I   +I L  N   KL D G     +S  + A T+   P+   PE C  +  +   
Sbjct: 125 LHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKS 184

Query: 211 -IFQLGVLILELVTGQSPEEGDV--DLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL 267
            I+ LG ++ EL T + P EG+   +L   I +            P +   Y S EL+ L
Sbjct: 185 DIWSLGCVLYELCTLKHPFEGENLLELALKILKGQY---------PPIPSQY-SSELRNL 234

Query: 268 LAVARLCIKT-KDKPTIS 284
             V+ L  K  +++P+I+
Sbjct: 235 --VSSLLQKDPEERPSIA 250

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 51.3 bits (123), Expect = 2e-07
 Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 20/138 (14%)

Query: 77  KDAFYREIQLLGRLHHRHLLALQGFSTGRKRL-LVFDNIENGSLKEHL------------ 123
           +  F +E +L+  L H +++ L G  T  +   ++F+ + +G L E L            
Sbjct: 52  QQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAE 111

Query: 124 --NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDV 181
             ++ +K+ LD    L IAI +AA +EYL   S+    +  +++ + ++ E  T K+SD 
Sbjct: 112 SGDETVKSSLDCSDFLHIAIQIAAGMEYL---SSHHFVHRDLAARNCLVGEGLTVKISDF 168

Query: 182 GFFNSV--RNYATMPHSS 197
           G    +   +Y  +   S
Sbjct: 169 GLSRDIYSADYYRVQSKS 186

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 50.9 bits (122), Expect = 2e-07
 Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 22/141 (15%)

Query: 60  QDGEVALV-----KEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDN 113
            + +  LV     KE  + +  KD F RE +LL    H +++   G  T G   ++VF+ 
Sbjct: 31  PENDKELVAVKTLKETASNDARKD-FEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEY 89

Query: 114 IENGSLKEHL------------NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYV 161
           +E+G L + L             D     L     LQIA+ +A+ + YL   ++    + 
Sbjct: 90  MEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYL---ASQHFVHR 146

Query: 162 SISSSSIMLDENFTAKLSDVG 182
            +++ + ++  +   K+ D G
Sbjct: 147 DLATRNCLVGYDLVVKIGDFG 167

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional

 Score = 50.5 bits (121), Expect = 3e-07
 Identities = 56/229 (24%), Positives = 92/229 (40%), Gaps = 31/229 (13%)

Query: 26  FIRRFSYKDIKMAT-----DGFHRIVYTNSHGAAYKARFQDGEVALV------KEIQALN 74
            I R    DIK             ++  N   + YK  F + EV +       K  + L 
Sbjct: 3   IITRSYINDIKCIESDDIDKYTSVLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVL- 61

Query: 75  LEKDAFYREIQLLGRLHHRHLLALQGF----STGRKRLLVFDNI-ENGSLKEHLNDPLKT 129
              D    EI+ L R+   ++L + GF         RL +       G L+E L+   + 
Sbjct: 62  --IDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDK--EK 117

Query: 130 PLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGF------ 183
            L +KT+L +AI     L  L  ++N P  Y +++S S ++ EN+  K+   G       
Sbjct: 118 DLSFKTKLDMAIDCCKGLYNLYKYTNKP--YKNLTSVSFLVTENYKLKIICHGLEKILSS 175

Query: 184 --FNSVRNYATMPHSSCPEDCSTQDCSNIIFQLGVLILELVTGQSPEEG 230
             F +V       +    +  S     + I+ LGV++ E+ TG+ P E 
Sbjct: 176 PPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFEN 224

Length = 283

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 47.0 bits (112), Expect = 4e-06
 Identities = 47/185 (25%), Positives = 78/185 (42%), Gaps = 25/185 (13%)

Query: 61  DGEVALVKEIQALNLEKDA------FYREIQLLGRLHHRHLLALQGFSTGRKRLLVF-DN 113
           DG+   VKE+   +  +          +EI LL +L H +++   G       L +F + 
Sbjct: 24  DGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLEL 83

Query: 114 IENGSLKEHLN--DPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLD 171
           +  GSL + L        P+      QI +G    LEYL    +    +  I  ++I++D
Sbjct: 84  VPGGSLAKLLKKYGSFPEPVIRLYTRQILLG----LEYL---HDRNTVHRDIKGANILVD 136

Query: 172 ENFTAKLSDVGFFNSVRNYATM------PHSSCPEDCSTQDCSNI---IFQLGVLILELV 222
            N   KL+D G    V  ++        P+   PE  + Q    +   I+ LG  +LE+ 
Sbjct: 137 TNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMA 196

Query: 223 TGQSP 227
           TG+ P
Sbjct: 197 TGKPP 201

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 45/199 (22%), Positives = 86/199 (43%), Gaps = 25/199 (12%)

Query: 50  SHGAAYKA-RFQDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLAL-QGFSTG 104
           S+G+ YK  R  D +   +KE+   ++   E++    EI++L  ++H ++++  + F  G
Sbjct: 12  SYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDG 71

Query: 105 RKRLLVFDNIENGSL------KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPM 158
            K  +V +    G L      ++     +     W+  +Q+  G+ A  E  +L  +L  
Sbjct: 72  NKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDL-- 129

Query: 159 YYVSISSSSIMLDENFTAKLSDVGFFNSVRNYAT-----MPHSSCPEDCSTQ--DCSNII 211
                 S++I+L  N   K+ D+G    ++          PH   PE    +     + I
Sbjct: 130 -----KSANILLVANDLVKIGDLGISKVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDI 184

Query: 212 FQLGVLILELVTGQSPEEG 230
           + LG L+ E+ T   P E 
Sbjct: 185 WSLGCLLYEMATFAPPFEA 203

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 45.0 bits (106), Expect = 2e-05
 Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 22/139 (15%)

Query: 80  FYREIQLLGRLHHRHLLALQGFSTGRKRL-LVFDNIENGSLKEHL--------------- 123
           F +E  L+  LHH +++ L G  T  + + ++F+ +  G L E L               
Sbjct: 54  FQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDE 113

Query: 124 NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGF 183
           +  +K+ LD    L IAI +AA +EYL   S+    +  +++ +I++ E    K+SD+G 
Sbjct: 114 DGTVKSSLDHGDFLHIAIQIAAGMEYL---SSHFFVHKDLAARNILIGEQLHVKISDLGL 170

Query: 184 FNSVRN---YATMPHSSCP 199
              + +   Y   P S  P
Sbjct: 171 SREIYSADYYRVQPKSLLP 189

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 45.1 bits (105), Expect = 2e-05
 Identities = 61/275 (22%), Positives = 101/275 (36%), Gaps = 28/275 (10%)

Query: 42  FHRIVYTNSHGAAYKARFQDGEV--ALVKEIQALNLEKDAFYREIQLLGRLHHRHLLA-- 97
             R +   S G  Y AR +       L K++++ + E + F REIQ+L  L+H   +   
Sbjct: 4   ILRKLGEGSFGEVYLARDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKL 63

Query: 98  LQGFSTGRKRLLVFDNIENGSLKEHL-NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNL 156
              F       LV + ++ GSL++ L     K PL     L I   + +ALEYL    + 
Sbjct: 64  YDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYL---HSK 120

Query: 157 PMYYVSISSSSIMLDEN-FTAKLSDVGFFNSVRNYATMPHSSC-------------PEDC 202
            + +  I   +I+LD +    KL D G    + +  +                   PE  
Sbjct: 121 GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVL 180

Query: 203 STQDCSNI-----IFQLGVLILELVTGQSPEEGDVDLIQWIQ-ESSISSSIHRMIDPDLG 256
                +       I+ LG+ + EL+TG  P EG+ +     Q    I       +   L 
Sbjct: 181 LGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLS 240

Query: 257 GSYDSKELKKLLAVARLCIKTKDKPTISIPQISRY 291
            S      K    + +  +    K  +S      +
Sbjct: 241 PSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275

Length = 384

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 44.5 bits (105), Expect = 3e-05
 Identities = 40/182 (21%), Positives = 85/182 (46%), Gaps = 16/182 (8%)

Query: 67  VKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRL-LVFDNIENGSLKEHLND 125
           VK ++   +E + F +E  ++  + H +L+ L G  T      ++ + +  G+L ++L +
Sbjct: 36  VKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE 95

Query: 126 PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFN 185
             +  ++    L +A  +++A+EYL         +  +++ + ++ EN   K++D G   
Sbjct: 96  CNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSR 152

Query: 186 SVRNYATMPHS--------SCPEDCSTQDCS--NIIFQLGVLILELVT-GQSPEEGDVDL 234
            +       H+        + PE  +    S  + ++  GVL+ E+ T G SP  G +DL
Sbjct: 153 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDL 211

Query: 235 IQ 236
            Q
Sbjct: 212 SQ 213

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 44.6 bits (106), Expect = 3e-05
 Identities = 39/182 (21%), Positives = 79/182 (43%), Gaps = 20/182 (10%)

Query: 63  EVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRL-LVFDNIENGSLKE 121
           +VA VK ++   +  +AF +E Q++ +L H  L+ L    +  + + +V + +  GSL +
Sbjct: 32  KVA-VKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLD 90

Query: 122 HLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYV--SISSSSIMLDENFTAKLS 179
            L       L     + +A  +A  + YL         Y+   +++ +I++ EN   K++
Sbjct: 91  FLKSGEGKKLRLPQLVDMAAQIAEGMAYL-----ESRNYIHRDLAARNILVGENLVCKIA 145

Query: 180 DVGFFNSVRNYATMPHSS--------CPE--DCSTQDCSNIIFQLGVLILELVT-GQSPE 228
           D G    + +                 PE  +       + ++  G+L+ E+VT G+ P 
Sbjct: 146 DFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPY 205

Query: 229 EG 230
            G
Sbjct: 206 PG 207

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 44.3 bits (105), Expect = 4e-05
 Identities = 30/141 (21%), Positives = 63/141 (44%), Gaps = 14/141 (9%)

Query: 52  GAAYKARF-----QDGEVALVKEIQAL--NLEKDAFYREIQLLGRLHHRHLLALQGFST- 103
           G     R+       GE   VK +        +  F REI++L  L H +++  +G    
Sbjct: 18  GKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEK 77

Query: 104 --GRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYV 161
             GR   L+ + + +GSL+++L    +  ++ K  L  +  +   ++YL    +    + 
Sbjct: 78  PGGRSLRLIMEYLPSGSLRDYLQR-HRDQINLKRLLLFSSQICKGMDYL---GSQRYIHR 133

Query: 162 SISSSSIMLDENFTAKLSDVG 182
            +++ +I+++     K+SD G
Sbjct: 134 DLAARNILVESEDLVKISDFG 154

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 44.0 bits (104), Expect = 5e-05
 Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 8/125 (6%)

Query: 62  GEVALVKEIQALNLEK-DAFYREIQLLGRLHHRHLLALQG--FSTGRKRL-LVFDNIENG 117
           GEV  VK++Q    E    F REI++L  L H +++  +G  +S GR+ L LV + +  G
Sbjct: 33  GEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYG 92

Query: 118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAK 177
           SL+++L    +  LD +  L  A  +   +EYL    +    +  +++ +I+++     K
Sbjct: 93  SLRDYLQKH-RERLDHRKLLLYASQICKGMEYL---GSKRYVHRDLATRNILVESENRVK 148

Query: 178 LSDVG 182
           + D G
Sbjct: 149 IGDFG 153

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 43.2 bits (102), Expect = 8e-05
 Identities = 45/173 (26%), Positives = 82/173 (47%), Gaps = 19/173 (10%)

Query: 76  EKDAFYREIQLLGRLHHRHLLALQGFSTGRK--RLLVFDNIENGSLKEHLNDPLKTPLDW 133
           E + F +E  ++    H ++L+L G     +   L+V   +++G L+  +      P   
Sbjct: 39  EVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNP-TV 97

Query: 134 KTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGF--------FN 185
           K  +   + VA  +EYL   ++    +  +++ + MLDE+FT K++D G         + 
Sbjct: 98  KDLIGFGLQVAKGMEYL---ASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY 154

Query: 186 SVRNY--ATMPHS-SCPEDCSTQDCS--NIIFQLGVLILELVTGQSPEEGDVD 233
           SV N+  A +P      E   TQ  +  + ++  GVL+ EL+T  +P   DVD
Sbjct: 155 SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD 207

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 42.7 bits (100), Expect = 1e-04
 Identities = 38/178 (21%), Positives = 79/178 (44%), Gaps = 14/178 (7%)

Query: 67  VKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKEHLNDP 126
           +K ++   +  +AF +E Q++ +L H  L+ L    +     +V + +  GSL + L   
Sbjct: 35  IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGE 94

Query: 127 LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFN- 185
           +   L     + +A  +A+ + Y+     +   +  + +++I++ EN   K++D G    
Sbjct: 95  MGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVADFGLARL 151

Query: 186 ------SVRNYATMPHS-SCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVD 233
                 + R  A  P   + PE          + ++  G+L+ EL T G+ P  G V+
Sbjct: 152 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 209

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 42.5 bits (100), Expect = 1e-04
 Identities = 55/243 (22%), Positives = 108/243 (44%), Gaps = 37/243 (15%)

Query: 67  VKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKEHLNDP 126
           +K ++  ++  +AF  E  L+ +L H  L+ L    T     ++ + +ENGSL + L  P
Sbjct: 35  IKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTP 94

Query: 127 LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFN- 185
               L     + +A  +A  + ++   + +   +  + +++I++ E    K++D G    
Sbjct: 95  EGIKLTINKLIDMAAQIAEGMAFIERKNYI---HRDLRAANILVSETLCCKIADFGLARL 151

Query: 186 ------SVRNYATMPHS-SCPE--DCSTQDCSNIIFQLGVLILELVT-GQSPEEG--DVD 233
                 + R  A  P   + PE  +  T    + ++  G+L+ E+VT G+ P  G  + +
Sbjct: 152 IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE 211

Query: 234 LIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTK--DKPTISIPQISRY 291
           +IQ ++        +RM  PD           +L  + RLC K K  ++PT        Y
Sbjct: 212 VIQNLERG------YRMPRPDNCPE-------ELYELMRLCWKEKPEERPTFE------Y 252

Query: 292 LQN 294
           L++
Sbjct: 253 LRS 255

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 42.2 bits (99), Expect = 1e-04
 Identities = 31/132 (23%), Positives = 64/132 (48%), Gaps = 5/132 (3%)

Query: 52  GAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRL-LV 110
           G  +   + +     +K I+   + ++ F  E Q++ +L H  L+ L G  T R  + LV
Sbjct: 18  GLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLV 77

Query: 111 FDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIML 170
           F+ +E+G L ++L    +     +T L + + V   + YL    +  + +  +++ + ++
Sbjct: 78  FEFMEHGCLSDYLRAQ-RGKFSQETLLGMCLDVCEGMAYL---ESSNVIHRDLAARNCLV 133

Query: 171 DENFTAKLSDVG 182
            EN   K+SD G
Sbjct: 134 GENQVVKVSDFG 145

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 47/190 (24%), Positives = 78/190 (41%), Gaps = 21/190 (11%)

Query: 52  GAAYKARF-QDGEVALVKEIQALNLEKDAFY----REIQLLGRLHHRHLLALQG-FSTGR 105
           G  YKAR  + G+   +K I    LE          EIQ+L +  H +++   G +    
Sbjct: 14  GEVYKARHKRTGKEVAIKVI---KLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKD 70

Query: 106 KRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISS 165
           +  +V +    GSLK+ L       L       +   +   LEYL    +  + +  I +
Sbjct: 71  ELWIVMEFCSGGSLKDLLKS-TNQTLTESQIAYVCKELLKGLEYL---HSNGIIHRDIKA 126

Query: 166 SSIMLDENFTAKLSDVGF---FNSVRNYATM---PHSSCPE--DCSTQDCSNIIFQLGVL 217
           ++I+L  +   KL D G     +  +   TM   P+   PE  +    D    I+ LG+ 
Sbjct: 127 ANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGIT 186

Query: 218 ILELVTGQSP 227
            +EL  G+ P
Sbjct: 187 AIELAEGKPP 196

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 31/112 (27%), Positives = 60/112 (53%), Gaps = 13/112 (11%)

Query: 76  EKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLL-VFDNIENGSLKEHL--NDPLKTPLD 132
           ++  F  E  ++G+  H +++ L+G  T  + ++ + + +ENGSL + L  ND   T   
Sbjct: 48  QRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQ 107

Query: 133 WKTRLQIAIGVAAALEYLLLFSNLPMYYV--SISSSSIMLDENFTAKLSDVG 182
               L+   G+A+ ++YL   S   M YV   +++ +I+++ N   K+SD G
Sbjct: 108 LVGMLR---GIASGMKYL---SE--MNYVHRDLAARNILVNSNLVCKVSDFG 151

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 42.4 bits (99), Expect = 2e-04
 Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 42/200 (21%)

Query: 60  QDGEVALVKEIQ--ALNLEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIEN 116
           QD  +  VK ++  + N  KD F+RE +LL  L H H++   G    G   ++VF+ +++
Sbjct: 33  QDKILVAVKTLKDASDNARKD-FHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKH 91

Query: 117 GSLKEHL-------------NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSI 163
           G L + L             N P    L     L IA  +AA + YL   ++    +  +
Sbjct: 92  GDLNKFLRAHGPDAVLMAEGNRP--AELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDL 146

Query: 164 SSSSIMLDENFTAKLSDVGFFNSVRNYAT---------------MPHSSCPEDCSTQDCS 208
           ++ + ++ EN   K+ D G    V  Y+T               MP  S      T +  
Sbjct: 147 ATRNCLVGENLLVKIGDFGMSRDV--YSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESD 204

Query: 209 NIIFQLGVLILELVT-GQSP 227
             ++ LGV++ E+ T G+ P
Sbjct: 205 --VWSLGVVLWEIFTYGKQP 222

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 41.9 bits (98), Expect = 2e-04
 Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 14/175 (8%)

Query: 67  VKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKEHLNDP 126
           VK ++   +  ++F  E Q++ +L H  L+ L    +     +V + +  GSL + L D 
Sbjct: 35  VKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKDG 94

Query: 127 LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFN- 185
               L     + +A  VAA + Y+     +   +  + S++I++ +    K++D G    
Sbjct: 95  EGRALKLPNLVDMAAQVAAGMAYI---ERMNYIHRDLRSANILVGDGLVCKIADFGLARL 151

Query: 186 ------SVRNYATMPHS-SCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEG 230
                 + R  A  P   + PE          + ++  G+L+ ELVT G+ P  G
Sbjct: 152 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPG 206

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 5/132 (3%)

Query: 52  GAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRL-LV 110
           G      ++  +VA VK ++  +    AF  E  ++  L H +L+ L G       L +V
Sbjct: 20  GDVMLGDYRGQKVA-VKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIV 78

Query: 111 FDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIML 170
            + +  GSL ++L    +  +    +L  A+ V   +EYL         +  +++ ++++
Sbjct: 79  TEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYL---EEKNFVHRDLAARNVLV 135

Query: 171 DENFTAKLSDVG 182
            E+  AK+SD G
Sbjct: 136 SEDLVAKVSDFG 147

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 41.5 bits (97), Expect = 3e-04
 Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 18/203 (8%)

Query: 44  RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLAL- 98
           + +   S G  Y A+ + D E  ++KEI    +   EK+A  +E+ LL ++ H +++   
Sbjct: 6   KKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFF 65

Query: 99  QGFSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPM 158
             F    +  +V +  + G L + +N            L   + ++  L+++    +  +
Sbjct: 66  ASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHI---HDRKI 122

Query: 159 YYVSISSSSIMLDEN-FTAKLSDVGFFNSVRNY-------ATMPHSSCPEDCSTQDCSNI 210
            +  I S +I L +N   AKL D G    + +           P+   PE C  +  +N 
Sbjct: 123 LHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNK 182

Query: 211 --IFQLGVLILELVTGQSPEEGD 231
             I+ LG ++ EL T + P EG+
Sbjct: 183 TDIWSLGCVLYELCTLKHPFEGN 205

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 40.8 bits (95), Expect = 4e-04
 Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 30/202 (14%)

Query: 46  VYTNSHGAAYKAR-FQDGEVALVKEIQALNLEK-DAF---YREIQLLGRLHHRHLLALQG 100
           V + ++G  YKAR    GE+A VK I+   LE  D F    +EI ++    H +++A  G
Sbjct: 17  VGSGTYGDVYKARNLHTGELAAVKIIK---LEPGDDFSLIQQEIFMVKECKHCNIVAYFG 73

Query: 101 FSTGRKRLLV-FDNIENGSLKE--HLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLP 157
               R++L +  +    GSL++  H+  PL       + LQIA      L+ L    +  
Sbjct: 74  SYLSREKLWICMEYCGGGSLQDIYHVTGPL-------SELQIAYVCRETLQGLAYLHSKG 126

Query: 158 MYYVSISSSSIMLDENFTAKLSDVGFFNSV-------RNYATMPHSSCPEDCSTQDCSNI 210
             +  I  ++I+L +N   KL+D G    +       +++   P+   PE  + +     
Sbjct: 127 KMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGY 186

Query: 211 -----IFQLGVLILELVTGQSP 227
                I+ +G+  +EL   Q P
Sbjct: 187 NQLCDIWAVGITAIELAELQPP 208

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 40.7 bits (95), Expect = 4e-04
 Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 5/132 (3%)

Query: 52  GAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVF 111
           GA  +  +   +VA VK I+  ++   AF  E  ++ +LHH++L+ L G        +V 
Sbjct: 20  GAVLQGEYTGQKVA-VKNIKC-DVTAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVM 77

Query: 112 DNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLD 171
           + +  G+L   L    +  +     LQ ++ VA  +EYL    +  + +  +++ +I++ 
Sbjct: 78  ELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYL---ESKKLVHRDLAARNILVS 134

Query: 172 ENFTAKLSDVGF 183
           E+  AK+SD G 
Sbjct: 135 EDGVAKVSDFGL 146

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 40.8 bits (95), Expect = 6e-04
 Identities = 37/161 (22%), Positives = 75/161 (46%), Gaps = 16/161 (9%)

Query: 77  KDAFYREIQLLGRLHHRHLLAL-QGFSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKT 135
           ++  + E+ ++   HH +++ +   +  G +  +V + +E G+L + +     T ++ + 
Sbjct: 63  RELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVT---HTRMNEEQ 119

Query: 136 RLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-------R 188
              + + V  AL YL    N  + +  I S SI+L  +   KLSD GF   V       +
Sbjct: 120 IATVCLSVLRALSYL---HNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRK 176

Query: 189 NYATMPHSSCPEDCSTQDCSN--IIFQLGVLILELVTGQSP 227
           +    P+   PE  S         I+ LG++++E++ G+ P
Sbjct: 177 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 217

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 40.4 bits (95), Expect = 6e-04
 Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 1/87 (1%)

Query: 64  VALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKEHL 123
           V  +K  +  ++  D F +E  ++  L H +L+ L G       ++V +    GSL + L
Sbjct: 28  VKCLKSDKLSDIMDD-FLKEAAIMHSLDHENLIRLYGVVLTHPLMMVTELAPLGSLLDRL 86

Query: 124 NDPLKTPLDWKTRLQIAIGVAAALEYL 150
                      T    A+ +A  + YL
Sbjct: 87  RKDALGHFLISTLCDYAVQIANGMRYL 113

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 39.9 bits (94), Expect = 7e-04
 Identities = 43/196 (21%), Positives = 78/196 (39%), Gaps = 31/196 (15%)

Query: 52  GAAYKA-RFQDGEVALVKEIQALNLEKDA---FYREIQLLGRLHHRHLLALQGFSTGRKR 107
           G  YK    + G+   +K+I    ++++A     +EI LL  L H +++   G       
Sbjct: 14  GVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDS 73

Query: 108 LLVF-DNIENGSLK------EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYY 160
           L +  +  ENGSL+          + L           +A+ V   L+ L       + +
Sbjct: 74  LYIILEYAENGSLRQIIKKFGPFPESL-----------VAVYVYQVLQGLAYLHEQGVIH 122

Query: 161 VSISSSSIMLDENFTAKLSDVGFFNSVRNYATMPHSS-------CPEDCSTQDCSNI--I 211
             I +++I+  ++   KL+D G    + + +    S         PE       S    I
Sbjct: 123 RDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDI 182

Query: 212 FQLGVLILELVTGQSP 227
           + LG  ++EL+TG  P
Sbjct: 183 WSLGCTVIELLTGNPP 198

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 39.8 bits (93), Expect = 0.001
 Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 3/73 (4%)

Query: 79  AFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKEHLN-DPLKTPLDWKTRL 137
           AF+    L+ +L H+HL+ L G     + ++V + ++ G L   L+ +     L WK  L
Sbjct: 47  AFFETASLMSQLSHKHLVKLYGVCVRDENIMVEEYVKFGPLDVFLHREKNNVSLHWK--L 104

Query: 138 QIAIGVAAALEYL 150
            +A  +A+AL YL
Sbjct: 105 DVAKQLASALHYL 117

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 39.7 bits (93), Expect = 0.001
 Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 9/123 (7%)

Query: 63  EVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLKE 121
            VA VK ++   ++   F  E Q++ +L H  L+ L    T      +V + ++ GSL E
Sbjct: 32  PVA-VKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLE 90

Query: 122 HLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYV--SISSSSIMLDENFTAKLS 179
           +L       L     + +A  VA+ + YL         Y+   +++ ++++ EN   K++
Sbjct: 91  YLQGGAGRALKLPQLIDMAAQVASGMAYLEA-----QNYIHRDLAARNVLVGENNICKVA 145

Query: 180 DVG 182
           D G
Sbjct: 146 DFG 148

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 39.6 bits (92), Expect = 0.001
 Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 12/116 (10%)

Query: 76  EKDAFYREIQLLGRLHHRHLLALQGF-STGRKRLLVFDNIENGSLKEHL--------NDP 126
           E+  F  E  ++   +  H++ L G  S G+  L++ + +  G LK +L        N+P
Sbjct: 52  ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 111

Query: 127 LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVG 182
           ++ P   K  +Q+A  +A  + YL   +     +  +++ + M+ E+FT K+ D G
Sbjct: 112 VQAPPSLKKMIQMAGEIADGMAYL---NANKFVHRDLAARNCMVAEDFTVKIGDFG 164

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 39.6 bits (92), Expect = 0.001
 Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 28/199 (14%)

Query: 48  TNSHGAAYKAR-FQDGEVALVKEIQALNLEK-DAFYREIQLLGRLHHRHLLALQGFSTGR 105
           + ++G  YKAR    GE+A +K I+    E      +EI ++    H +++A  G    R
Sbjct: 19  SGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRR 78

Query: 106 KRLLV-FDNIENGSLKE--HLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVS 162
            +L +  +    GSL++  H+  PL       +  QIA      L+ L    +    +  
Sbjct: 79  DKLWICMEFCGGGSLQDIYHVTGPL-------SESQIAYVSRETLQGLYYLHSKGKMHRD 131

Query: 163 ISSSSIMLDENFTAKLSDVGFFNSV-------RNYATMPHSSCPEDCS-------TQDCS 208
           I  ++I+L +N   KL+D G    +       +++   P+   PE  +        Q C 
Sbjct: 132 IKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCD 191

Query: 209 NIIFQLGVLILELVTGQSP 227
             I+ +G+  +EL   Q P
Sbjct: 192 --IWAVGITAIELAELQPP 208

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 39.6 bits (92), Expect = 0.001
 Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 18/138 (13%)

Query: 60  QDGEVALVKEIQALNLE-KDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENG 117
           QD  +  VK ++  +   +  F RE +LL  L H+H++   G  T GR  L+VF+ + +G
Sbjct: 33  QDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHG 92

Query: 118 SLKEHL-------------NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSIS 164
            L   L              D     L     L IA  +A+ + YL   ++L   +  ++
Sbjct: 93  DLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYL---ASLHFVHRDLA 149

Query: 165 SSSIMLDENFTAKLSDVG 182
           + + ++ +    K+ D G
Sbjct: 150 TRNCLVGQGLVVKIGDFG 167

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 39.2 bits (91), Expect = 0.002
 Identities = 62/254 (24%), Positives = 110/254 (43%), Gaps = 51/254 (20%)

Query: 62  GEVALVKE--------IQALNL------EKDAFYREIQLLGRLHHRHLLALQGFSTGRKR 107
           GEV+LV+         I+ LNL      E+ A  +E QLL +L H +++A +    G   
Sbjct: 14  GEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDG 73

Query: 108 LL--VFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYL----LLFSNLPMYYV 161
           LL  V    E G L   L +     L     ++  + +A AL+YL    +L  +L    V
Sbjct: 74  LLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNV 133

Query: 162 SISSSSIMLDENFTAKLSDVGFFNSVRNYATM-------PHSSCPEDCSTQ--DCSNIIF 212
            ++ ++I+       K+ D+G    + N   M       P+   PE  S +  +  + ++
Sbjct: 134 FLTRTNII-------KVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVW 186

Query: 213 QLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMID---PDLGGSYDSKELKKLLA 269
            LG  + E+ T          L        ++S ++R+I+   P +   Y S EL +L+A
Sbjct: 187 ALGCCVYEMAT----------LKHAFNAKDMNSLVYRIIEGKLPPMPKDY-SPELGELIA 235

Query: 270 VARLCIKTKDKPTI 283
              L  + + +P++
Sbjct: 236 -TMLSKRPEKRPSV 248

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 39.1 bits (92), Expect = 0.002
 Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 12/110 (10%)

Query: 132 DWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYA 191
           ++  R  IA  V  A EYL    N  + Y  +   +++LD N   KL D GF   +++  
Sbjct: 92  EYTARFYIA-CVVLAFEYL---HNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ 147

Query: 192 TM------PHSSCPEDCSTQ--DCSNIIFQLGVLILELVTGQSPEEGDVD 233
                   P    PE    +  D S   + LG+L+ EL+TG+ P   D +
Sbjct: 148 KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE 197

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 38.3 bits (89), Expect = 0.003
 Identities = 26/117 (22%), Positives = 55/117 (47%), Gaps = 5/117 (4%)

Query: 67  VKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGF-STGRKRLLVFDNIENGSLKEHLND 125
           +K I+  ++ +D F  E +++ +L H  L+ L G  +  R   +V + + NG L  +L +
Sbjct: 33  IKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLRE 92

Query: 126 PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVG 182
             K        L++   V   + YL    +    +  +++ + ++D+    K+SD G
Sbjct: 93  HGKRF-QPSQLLEMCKDVCEGMAYL---ESKQFIHRDLAARNCLVDDQGCVKVSDFG 145

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 38.1 bits (88), Expect = 0.003
 Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 22/182 (12%)

Query: 67  VKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKEHLNDP 126
           +K ++   +  +AF +E Q++ +L H  L+ L    +     +V + +  GSL + L + 
Sbjct: 35  IKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMGKGSLLDFLKEG 94

Query: 127 ----LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVG 182
               LK P       QIA G+A           +   +  + +++I++ +N   K++D G
Sbjct: 95  DGKYLKLPQLVDMAAQIADGMA-------YIERMNYIHRDLRAANILVGDNLVCKIADFG 147

Query: 183 FFN-------SVRNYATMPHS-SCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGD 231
                     + R  A  P   + PE          + ++  G+L+ ELVT G+ P  G 
Sbjct: 148 LARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGM 207

Query: 232 VD 233
           V+
Sbjct: 208 VN 209

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 38.1 bits (88), Expect = 0.003
 Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 22/164 (13%)

Query: 77  KDAFYREIQLLGRLHHRHLLAL-QGFSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKT 135
           ++  + E+ ++    H +++ +   +  G +  +V + +E G+L         T +   T
Sbjct: 61  RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL---------TDIVTHT 111

Query: 136 RL---QIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV----- 187
           R+   QIA    A L+ L +     + +  I S SI+L  +   KLSD GF   V     
Sbjct: 112 RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 171

Query: 188 --RNYATMPHSSCPEDCSTQDCSN--IIFQLGVLILELVTGQSP 227
             ++    P+   PE  S         I+ LG++++E+V G+ P
Sbjct: 172 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 38.0 bits (88), Expect = 0.004
 Identities = 28/133 (21%), Positives = 65/133 (48%), Gaps = 9/133 (6%)

Query: 62  GEVALVKEIQALNLEKDA--FYREIQLLGRLHHRHLLALQGFST---GRKRLLVFDNIEN 116
           GE   VK ++  +         +EI++L  L+H +++  +G  T   G    L+ + + +
Sbjct: 33  GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 92

Query: 117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTA 176
           GSLKE+L    K  ++ K +L+ A+ +   ++YL    +    +  +++ +++++     
Sbjct: 93  GSLKEYLPRN-KNKINLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQV 148

Query: 177 KLSDVGFFNSVRN 189
           K+ D G   ++  
Sbjct: 149 KIGDFGLTKAIET 161

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	309
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
PTZ00284	467	protein kinase; Provisional	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
KOG2052	513	consensus Activin A type IB receptor, serine/threo	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
PTZ00024	335	cyclin-dependent protein kinase; Provisional	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	100.0
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	100.0
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	100.0
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	100.0
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	100.0
KOG3653	534	consensus Transforming growth factor beta/activin	100.0
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	100.0
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.98
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.98
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.98
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.97
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.97
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.97
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.97
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.97
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.97
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.97
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.97
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.97
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.97
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.97
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.97
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.97
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.97
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.97
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.96
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.96
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.96
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.96
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.96
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.96
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.96
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.96
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.95
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.95
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.95
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.94
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.94
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.94
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.94
KOG1152	772	consensus Signal transduction serine/threonine kin	99.94
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.94
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.93
PLN00181	793	protein SPA1-RELATED; Provisional	99.92
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.92
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.91
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.9
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.9
PRK09188	365	serine/threonine protein kinase; Provisional	99.88
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.88
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.87
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.86
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.85
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.85
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.84
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.83
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.83
PRK12274	218	serine/threonine protein kinase; Provisional	99.8
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.79
PRK10345	210	hypothetical protein; Provisional	99.78
smart00090	237	RIO RIO-like kinase.	99.76
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.76
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.74
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.74
PRK14879	211	serine/threonine protein kinase; Provisional	99.74
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.72
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.71
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.7
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.69
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.64
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.61
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.6
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.48
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.46
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.45
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.42
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.42
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.41
KOG1243	690	consensus Protein kinase [General function predict	99.38
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.28
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.27
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.27
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.17
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.15
KOG3087	229	consensus Serine/threonine protein kinase [General	99.12
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	99.08
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	99.0
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.96
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.89
PRK09902	216	hypothetical protein; Provisional	98.79
COG4248	637	Uncharacterized protein with protein kinase and he	98.78
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.77
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.65
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.55
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.52
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.49
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	98.46
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.4
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.35
PF01636	239	APH: Phosphotransferase enzyme family This family	98.33
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.31
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	98.28
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.22
KOG1235	538	consensus Predicted unusual protein kinase [Genera	98.08
PLN02876	822	acyl-CoA dehydrogenase	98.01
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.97
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	97.89
PRK10593	297	hypothetical protein; Provisional	97.78
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.77
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.66
PRK09550	401	mtnK methylthioribose kinase; Reviewed	97.58
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	97.52
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.49
KOG2268	465	consensus Serine/threonine protein kinase [Signal	97.45
KOG0576	829	consensus Mitogen-activated protein kinase kinase	97.33
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	97.32
PRK05231	319	homoserine kinase; Provisional	97.27
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.24
PLN02756	418	S-methyl-5-thioribose kinase	97.2
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	97.13
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	97.04
KOG2270	520	consensus Serine/threonine protein kinase involved	96.91
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	96.87
PRK12396	409	5-methylribose kinase; Reviewed	96.71
COG2334	331	Putative homoserine kinase type II (protein kinase	96.67
PLN02236	344	choline kinase	96.64
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	96.45
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	96.34
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	96.32
PRK11768	325	serine/threonine protein kinase; Provisional	96.32
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	96.28
KOG1093	725	consensus Predicted protein kinase (contains TBC a	95.98
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	95.84
PRK06148	1013	hypothetical protein; Provisional	95.83
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	95.8
PF04655	253	APH_6_hur: Aminoglycoside/hydroxyurea antibiotic r	94.68
PTZ00384	383	choline kinase; Provisional	94.35
PTZ00296	442	choline kinase; Provisional	93.73
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	93.22
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	92.83
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	92.82

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.5e-52  Score=372.99  Aligned_cols=273  Identities=33%  Similarity=0.580  Sum_probs=239.7

Q ss_pred             cccccCHHHHHHhhcccc--cccccCCCceEEEEEEcCCcEEEEEEecccccc-HHHHHHHHHHHccCCCCCcceEeeeE
Q 021659           26 FIRRFSYKDIKMATDGFH--RIVYTNSHGAAYKARFQDGEVALVKEIQALNLE-KDAFYREIQLLGRLHHRHLLALQGFS  102 (309)
Q Consensus        26 ~~~~~~~~~i~~~~~~~~--~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~-~~~~~~ei~~l~~l~h~niv~~~~~~  102 (309)
                      ..+.|++.++..+|++|+  ..||+|+||.||+|...++..||+|++...... .++|.+|++++.+++|||+++++|||
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            688899999999999999  599999999999999999899999988655544 56699999999999999999999999


Q ss_pred             eC-C-eeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEec
Q 021659          103 TG-R-KRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSD  180 (309)
Q Consensus       103 ~~-~-~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~d  180 (309)
                      .+ . +.++|+||+++|||.+.+.......++|..+.+|+.++++||+|||......|+||||||+|||+|++.++||+|
T Consensus       141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD  220 (361)
T KOG1187|consen  141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD  220 (361)
T ss_pred             ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence            86 4 489999999999999999874333899999999999999999999876667899999999999999999999999


Q ss_pred             cccccccccc--------CCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCC-----CccHHHHHHHhcccc
Q 021659          181 VGFFNSVRNY--------ATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEG-----DVDLIQWIQESSISS  245 (309)
Q Consensus       181 fg~~~~~~~~--------~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~-----~~~~~~~~~~~~~~~  245 (309)
                      ||+++.....        .||.+|++||+...  .+.++||||||++++|++||+.+...     ...+..|+.......
T Consensus       221 FGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~  300 (361)
T KOG1187|consen  221 FGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEG  300 (361)
T ss_pred             ccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCc
Confidence            9999655431        68899999998754  48899999999999999999988653     335788887777778


Q ss_pred             cccccccCcCC-CCCCH-HHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcc
Q 021659          246 SIHRMIDPDLG-GSYDS-KELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDI  298 (309)
Q Consensus       246 ~~~~~~~~~l~-~~~~~-~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~  298 (309)
                      .+.+++||.+. ..+.. .++..+..++.+|++.+|+.||+|.||++.|+.....
T Consensus       301 ~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~  355 (361)
T KOG1187|consen  301 KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL  355 (361)
T ss_pred             chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence            99999999987 55554 6899999999999999999999999999999655443

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-46  Score=323.65  Aligned_cols=234  Identities=18%  Similarity=0.272  Sum_probs=191.4

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEec--cccccHHHHHHHHHHHccCCCCCcceEeeeE-eCC-eeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQ--ALNLEKDAFYREIQLLGRLHHRHLLALQGFS-TGR-KRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~--~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~-~~~-~~~lv~e~~~~~s  118 (309)
                      +.||+|..|+||++.+ .+++.+|+|++.  .....++++.+|+++++..+||+||.+||.+ .+. ..+++||||++||
T Consensus        85 ~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGS  164 (364)
T KOG0581|consen   85 GVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGS  164 (364)
T ss_pred             hhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCC
Confidence            3699999999999997 468999999993  3344467899999999999999999999955 455 4889999999999


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc-----cccCCC
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-----RNYATM  193 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-----~~~~~~  193 (309)
                      |++.+..  .+.+++....+++.++++||.|||  ++.+|+||||||+|+|++..|.|||||||.+..+     ....||
T Consensus       165 Ld~~~k~--~g~i~E~~L~~ia~~VL~GL~YLh--~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~tfvGT  240 (364)
T KOG0581|consen  165 LDDILKR--VGRIPEPVLGKIARAVLRGLSYLH--EERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANTFVGT  240 (364)
T ss_pred             HHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHh--hccCeeeccCCHHHeeeccCCCEEeccccccHHhhhhhccccccc
Confidence            9999987  578999999999999999999995  3589999999999999999999999999998643     567899


Q ss_pred             CCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCC----ccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          194 PHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGD----VDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       194 ~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ..|+|||...+  ++.++||||||+.++||++|+.|+...    ......+... ..+     ..|.++.+..   ..++
T Consensus       241 ~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~I-v~~-----ppP~lP~~~f---S~ef  311 (364)
T KOG0581|consen  241 SAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAI-VDE-----PPPRLPEGEF---SPEF  311 (364)
T ss_pred             ccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHH-hcC-----CCCCCCcccC---CHHH
Confidence            99999998655  578899999999999999999999764    2222222211 111     1234443322   3445


Q ss_pred             HHHHHHccCCCCCCCCChHHHHH
Q 021659          268 LAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ..++..||++||.+||++.|+++
T Consensus       312 ~~FV~~CL~Kdp~~R~s~~qLl~  334 (364)
T KOG0581|consen  312 RSFVSCCLRKDPSERPSAKQLLQ  334 (364)
T ss_pred             HHHHHHHhcCCcccCCCHHHHhc
Confidence            56666999999999999999984

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=6.5e-47  Score=313.57  Aligned_cols=244  Identities=23%  Similarity=0.285  Sum_probs=196.0

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc---ccHHHHHHHHHHHccCCCCCcceEee--eEeCCe-eEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN---LEKDAFYREIQLLGRLHHRHLLALQG--FSTGRK-RLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~---~~~~~~~~ei~~l~~l~h~niv~~~~--~~~~~~-~~lv~e~~~~  116 (309)
                      +.||.|+||.||++.. .+|..+|.|.++-..   ...+....|+.+|++|+|||||++++  |..+.. .++|||+|+.
T Consensus        25 ~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~  104 (375)
T KOG0591|consen   25 KKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDA  104 (375)
T ss_pred             HHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhcc
Confidence            6799999999999995 689999999996433   33467889999999999999999998  444444 7799999999


Q ss_pred             CCHHHhhcC--CCCCCCCHHHHHHHHHHHHHHHhhhhhcC-CCCeeecccCCCceeeCCCCceeEeccccccccc-----
Q 021659          117 GSLKEHLND--PLKTPLDWKTRLQIAIGVAAALEYLLLFS-NLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-----  188 (309)
Q Consensus       117 ~sL~~~i~~--~~~~~l~~~~~~~i~~~i~~~l~~lh~~h-~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-----  188 (309)
                      |+|.+.|+.  ...+.+++.++|+++.|++.||..||+.- ..-|+||||||+||+++.+|.+||+|||+++.++     
T Consensus       105 GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tf  184 (375)
T KOG0591|consen  105 GDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTTF  184 (375)
T ss_pred             cCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchhHH
Confidence            999999963  34688999999999999999999996421 1349999999999999999999999999998765     


Q ss_pred             --ccCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHH
Q 021659          189 --NYATMPHSSCPEDC--STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKEL  264 (309)
Q Consensus       189 --~~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  264 (309)
                        ..+|||.|++||..  .++++++||||+||++|||+.-++||.++ ++.++-... ..+..     |.++.   ...+
T Consensus       185 A~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-n~~~L~~KI-~qgd~-----~~~p~---~~YS  254 (375)
T KOG0591|consen  185 AHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-NLLSLCKKI-EQGDY-----PPLPD---EHYS  254 (375)
T ss_pred             HHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-cHHHHHHHH-HcCCC-----CCCcH---HHhh
Confidence              35899999999964  55689999999999999999999999987 443333222 22221     22222   2345


Q ss_pred             HHHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          265 KKLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       265 ~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                      .++..++..|+..||+.||++-.++..+++.++
T Consensus       255 ~~l~~li~~ci~vd~~~RP~t~~~v~di~~~l~  287 (375)
T KOG0591|consen  255 TDLRELINMCIAVDPEQRPDTVPYVQDIQSELD  287 (375)
T ss_pred             hHHHHHHHHHccCCcccCCCcchHHHHHHHHhc
Confidence            666677779999999999998777777766544

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-44  Score=323.00  Aligned_cols=241  Identities=24%  Similarity=0.339  Sum_probs=198.5

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEecccccc---HHHHHHHHHHHccCCCCCcceEeeeEeCC--eeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLE---KDAFYREIQLLGRLHHRHLLALQGFSTGR--KRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~h~niv~~~~~~~~~--~~~lv~e~~~~~s  118 (309)
                      +.+|+|+||+||+|.+.....||+|.+.....+   .+.|.+|+.+|.+|+|||||+++|+|.+.  ...+||||+++|+
T Consensus        47 ~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~Gs  126 (362)
T KOG0192|consen   47 EVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGS  126 (362)
T ss_pred             hhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCc
Confidence            469999999999999976666999999644333   45899999999999999999999999875  4789999999999


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCC-eeecccCCCceeeCCCC-ceeEecccccccccc-------
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLP-MYYVSISSSSIMLDENF-TAKLSDVGFFNSVRN-------  189 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~-i~H~dl~p~nill~~~~-~~kl~dfg~~~~~~~-------  189 (309)
                      |.+++.......+++..++.++.+|++|+.||   |+.+ ||||||||+|+|++.++ ++||+|||+++....       
T Consensus       127 L~~~l~~~~~~~l~~~~~l~~aldiArGm~YL---H~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~  203 (362)
T KOG0192|consen  127 LSVLLHKKRKRKLPLKVRLRIALDIARGMEYL---HSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTS  203 (362)
T ss_pred             HHHHHhhcccCCCCHHHHHHHHHHHHHHHHHH---hcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccccccccC
Confidence            99999764468899999999999999999999   6677 99999999999999997 999999999964432       


Q ss_pred             cCCCCCCCCCCCCC----CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHH
Q 021659          190 YATMPHSSCPEDCS----TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELK  265 (309)
Q Consensus       190 ~~~~~~~~~PE~~~----~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  265 (309)
                      ..||+.|+|||.+.    .++.++||||||+++|||+||+.||.+... .+.+.........     |.++..    ...
T Consensus       204 ~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~~~~~v~~~~~R-----p~~p~~----~~~  273 (362)
T KOG0192|consen  204 VAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-VQVASAVVVGGLR-----PPIPKE----CPP  273 (362)
T ss_pred             CCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhcCCC-----CCCCcc----CCH
Confidence            57889999999876    358999999999999999999999998765 3333332222222     222211    234


Q ss_pred             HHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          266 KLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       266 ~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                      .+..++.+||..||..||+..+++..|+....
T Consensus       274 ~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~  305 (362)
T KOG0192|consen  274 HLSSLMERCWLVDPSRRPSFLEIVSRLESIMS  305 (362)
T ss_pred             HHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence            45566669999999999999999999986654

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.8e-45  Score=330.37  Aligned_cols=230  Identities=21%  Similarity=0.309  Sum_probs=192.0

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecc----ccccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQA----LNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~----~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+|+.||.++. ..|..||+|++..    ....++++.+||++.++|+|||||++++|+.+ .+.|+|+|+|..+
T Consensus        24 ~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~~  103 (592)
T KOG0575|consen   24 RFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHRG  103 (592)
T ss_pred             eeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCCc
Confidence            5899999999999997 7899999999965    34456789999999999999999999998877 7889999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------cc
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NY  190 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~  190 (309)
                      +|..+++.  ..++++.++..++.||+.||.||   |+.+|+|||||..|++++++-+|||+|||+|....       +.
T Consensus       104 sL~el~Kr--rk~ltEpEary~l~QIv~GlkYL---H~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~Tl  178 (592)
T KOG0575|consen  104 SLMELLKR--RKPLTEPEARYFLRQIVEGLKYL---HSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKTL  178 (592)
T ss_pred             cHHHHHHh--cCCCCcHHHHHHHHHHHHHHHHH---HhcCceecccchhheeecCcCcEEecccceeeeecCccccccee
Confidence            99999986  78999999999999999999999   88899999999999999999999999999997665       34


Q ss_pred             CCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHH
Q 021659          191 ATMPHSSCPEDC--STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL  268 (309)
Q Consensus       191 ~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~  268 (309)
                      .|||.|.|||..  .+.++.+||||+||++|.|++|++||....-...+......     +..-|.    .-+.+.++|+
T Consensus       179 CGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~-----~Y~~P~----~ls~~A~dLI  249 (592)
T KOG0575|consen  179 CGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLN-----EYSMPS----HLSAEAKDLI  249 (592)
T ss_pred             cCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhc-----Cccccc----ccCHHHHHHH
Confidence            899999999974  44578999999999999999999999865211111111111     111121    1233445555


Q ss_pred             HHHHHccCCCCCCCCChHHHHH
Q 021659          269 AVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       269 ~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .   ++|++||.+|||+.+|+.
T Consensus       250 ~---~lL~~~P~~Rpsl~~vL~  268 (592)
T KOG0575|consen  250 R---KLLRPNPSERPSLDEVLD  268 (592)
T ss_pred             H---HHhcCCcccCCCHHHHhc
Confidence            5   999999999999999984

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.4e-44  Score=313.50  Aligned_cols=235  Identities=15%  Similarity=0.213  Sum_probs=185.4

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc--------cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEee
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL--------EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~--------~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      +.||+|+||.|-+|.. .+++.||+|++.....        ......+|+++|++|+|||||++.++++. ...|+||||
T Consensus       178 ~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE~  257 (475)
T KOG0615|consen  178 KTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLEY  257 (475)
T ss_pred             eeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEEEE
Confidence            5799999999999985 5689999999943211        12245799999999999999999998876 667999999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC---CceeEecccccccc---
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN---FTAKLSDVGFFNSV---  187 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~---~~~kl~dfg~~~~~---  187 (309)
                      ++||.|-+.+.+  ++.+.+..-..++.|++.|+.||   |+.||+||||||+|||++.+   ..+||+|||+|+..   
T Consensus       258 v~GGeLfd~vv~--nk~l~ed~~K~~f~Qll~avkYL---H~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~  332 (475)
T KOG0615|consen  258 VEGGELFDKVVA--NKYLREDLGKLLFKQLLTAVKYL---HSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEG  332 (475)
T ss_pred             ecCccHHHHHHh--ccccccchhHHHHHHHHHHHHHH---HHcCcccccCCcceEEeccCCcceEEEecccchhhccccc
Confidence            999999999987  67888888899999999999999   89999999999999999876   67999999999865   


Q ss_pred             ---cccCCCCCCCCCCCCCCC-----CCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCC
Q 021659          188 ---RNYATMPHSSCPEDCSTQ-----DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSY  259 (309)
Q Consensus       188 ---~~~~~~~~~~~PE~~~~~-----~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  259 (309)
                         .+..||+.|.|||.....     ..+.|+||+||+||-+++|.+||.+.........+. ..+...-  -|    ..
T Consensus       333 sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI-~~G~y~f--~p----~~  405 (475)
T KOG0615|consen  333 SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQI-LKGRYAF--GP----LQ  405 (475)
T ss_pred             eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHH-hcCcccc--cC----hh
Confidence               356899999999975433     347899999999999999999998653322111111 1111100  01    11


Q ss_pred             CHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          260 DSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       260 ~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      +..-..+.+.++.+||..||++|||+.|+++
T Consensus       406 w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  406 WDRISEEALDLINWMLVVDPENRPSADEALN  436 (475)
T ss_pred             hhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence            1122445556666999999999999999884

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-43  Score=317.48  Aligned_cols=279  Identities=19%  Similarity=0.263  Sum_probs=216.5

Q ss_pred             HHHHHHHHHhHhhhcCCC---CcccccccCHH--HHHHhhcccccccccCCCceEEEEEEcCCcEEEEEEeccccccHHH
Q 021659            5 IRKFRRLLLSWLHRSRSG---PKCFIRRFSYK--DIKMATDGFHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDA   79 (309)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~i~~~~~~~~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~   79 (309)
                      ++....+++.-|...+..   ..+....++.+  ++.+..-++.+.||+|-||.||.|.+.....||+|.+.......+.
T Consensus       168 ~~~~~~gl~~~l~~p~~~~~~~~p~~~~~~~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~  247 (468)
T KOG0197|consen  168 YSKNADGLCTRLRDPCSKQGHTKPQTPDLARDPWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEA  247 (468)
T ss_pred             hhccCcchhhcccCchhccCCCCCCCCccccCCeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccccChhH
Confidence            445556666666655554   22222222211  3333333355789999999999999988889999999888888889


Q ss_pred             HHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCe
Q 021659           80 FYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPM  158 (309)
Q Consensus        80 ~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i  158 (309)
                      |.+|++++++|+|+|||+++|+|.. ...||||||++.|+|.+++....+..+...+.+.++.||++|++||   +++++
T Consensus       248 f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YL---es~~~  324 (468)
T KOG0197|consen  248 FLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYL---ESKNY  324 (468)
T ss_pred             HHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHH---HhCCc
Confidence            9999999999999999999999987 5589999999999999999986678899999999999999999999   99999


Q ss_pred             eecccCCCceeeCCCCceeEecccccccccccC--------CCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCC
Q 021659          159 YYVSISSSSIMLDENFTAKLSDVGFFNSVRNYA--------TMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSP  227 (309)
Q Consensus       159 ~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~~--------~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p  227 (309)
                      |||||..+||||+.+..+||+|||+++......        -...|.|||..  ..++.+|||||||++|+|++| |+.|
T Consensus       325 IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~p  404 (468)
T KOG0197|consen  325 IHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVP  404 (468)
T ss_pred             cchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCC
Confidence            999999999999999999999999998544321        22468999964  445889999999999999998 8888


Q ss_pred             CCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          228 EEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                      +.+.. ..+.+........   +..|..       +...+-+++..||+.+|++|||...+...|+....
T Consensus       405 y~~ms-n~ev~~~le~GyR---lp~P~~-------CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~  463 (468)
T KOG0197|consen  405 YPGMS-NEEVLELLERGYR---LPRPEG-------CPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT  463 (468)
T ss_pred             CCCCC-HHHHHHHHhccCc---CCCCCC-------CCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence            77543 3333333332222   222222       23345566669999999999999999999886543

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=5.3e-44  Score=298.97  Aligned_cols=240  Identities=21%  Similarity=0.257  Sum_probs=191.5

Q ss_pred             ccccCCCceEEEEEEc-CCcEEEEEEecccccc---HHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           45 IVYTNSHGAAYKARFQ-DGEVALVKEIQALNLE---KDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      ++|+|+||.||+++.+ +|++||+|++..++.+   ++-..+||+.|++|+|+|+|+++++|.. ...++|+|||+. ++
T Consensus         9 kvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dh-Tv   87 (396)
T KOG0593|consen    9 KVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDH-TV   87 (396)
T ss_pred             ccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecch-HH
Confidence            6999999999999975 5899999999544433   3456899999999999999999997765 778899999999 55


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYAT  192 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~~  192 (309)
                      .+-+... ...++...+.+++.|++.|+.||   |+++++||||||.||+++.+|.+|+||||+|+...       .+..
T Consensus        88 L~eLe~~-p~G~~~~~vk~~l~Q~l~ai~~c---Hk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVA  163 (396)
T KOG0593|consen   88 LHELERY-PNGVPSELVKKYLYQLLKAIHFC---HKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYVA  163 (396)
T ss_pred             HHHHHhc-cCCCCHHHHHHHHHHHHHHhhhh---hhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhhh
Confidence            5555442 46688899999999999999999   88999999999999999999999999999998665       3456


Q ss_pred             CCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccc-------------------cccc
Q 021659          193 MPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSS-------------------IHRM  250 (309)
Q Consensus       193 ~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~-------------------~~~~  250 (309)
                      |.-|.|||...   .++...||||+||++.||++|++.|++..++.+.......-+.                   +++.
T Consensus       164 TRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~  243 (396)
T KOG0593|consen  164 TRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEP  243 (396)
T ss_pred             hhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCC
Confidence            67789999643   4588999999999999999999999998888776432211111                   1111


Q ss_pred             ccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHH
Q 021659          251 IDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQIS  289 (309)
Q Consensus       251 ~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl  289 (309)
                      -++.......+....-+++++..||+.||++|++.++++
T Consensus       244 ~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll  282 (396)
T KOG0593|consen  244 EHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLL  282 (396)
T ss_pred             CCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHh
Confidence            222222222333455677788899999999999999988

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=3.8e-43  Score=304.56  Aligned_cols=183  Identities=21%  Similarity=0.342  Sum_probs=163.3

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~s  118 (309)
                      +.||.|+|++||+|++ .++..||+|.+.....   ..+-+..|+.+|+.++|||||.+++++.. +..|+|||||+||+
T Consensus        16 ~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGD   95 (429)
T KOG0595|consen   16 REIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGD   95 (429)
T ss_pred             hhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCCC
Confidence            5699999999999997 4578999999965433   34567899999999999999999998875 78889999999999


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC------CceeEecccccccccc---
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN------FTAKLSDVGFFNSVRN---  189 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~------~~~kl~dfg~~~~~~~---  189 (309)
                      |.+++..  .+.+++.++..++.|++.||++|   |+++|+||||||+|||++..      ..+||+|||+++....   
T Consensus        96 Ls~yi~~--~~~l~e~t~r~Fm~QLA~alq~L---~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~  170 (429)
T KOG0595|consen   96 LSDYIRR--RGRLPEATARHFMQQLASALQFL---HENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSM  170 (429)
T ss_pred             HHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhH
Confidence            9999998  67999999999999999999999   88999999999999999865      5689999999987653   


Q ss_pred             ---cCCCCCCCCCCC--CCCCCCCCcEeehhhHHHHHHhCCCCCCCC
Q 021659          190 ---YATMPHSSCPED--CSTQDCSNIIFQLGVLILELVTGQSPEEGD  231 (309)
Q Consensus       190 ---~~~~~~~~~PE~--~~~~~~~~Dv~slG~~l~~l~tg~~p~~~~  231 (309)
                         -.|++-|+|||.  ...++.++|+||+|+++|+|++|+.||...
T Consensus       171 a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~  217 (429)
T KOG0595|consen  171 AETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE  217 (429)
T ss_pred             HHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence               479999999996  456789999999999999999999999854

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-42  Score=300.57  Aligned_cols=237  Identities=21%  Similarity=0.291  Sum_probs=187.8

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccccc-HHHHHHHHHHHccCCCCCcceEeeeEe-CC--eeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLE-KDAFYREIQLLGRLHHRHLLALQGFST-GR--KRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~-~~~~~~ei~~l~~l~h~niv~~~~~~~-~~--~~~lv~e~~~~~s  118 (309)
                      +.||+|+||.||++... +|+..|+|.+...... .+.+.+|+.+|.+|+|||||+++|... ..  ..++.|||+++|+
T Consensus        23 ~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~Gs  102 (313)
T KOG0198|consen   23 KLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGS  102 (313)
T ss_pred             ccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCCc
Confidence            58999999999999974 4899999998544221 456899999999999999999999643 33  4669999999999


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC-CCceeEeccccccccc---------
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE-NFTAKLSDVGFFNSVR---------  188 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~-~~~~kl~dfg~~~~~~---------  188 (309)
                      |.+++...++ .+++..+..+..++++||.||   |++|++||||||+|||++. ++.+||+|||++....         
T Consensus       103 L~~~~~~~g~-~l~E~~v~~ytr~iL~GL~yl---Hs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~  178 (313)
T KOG0198|consen  103 LSDLIKRYGG-KLPEPLVRRYTRQILEGLAYL---HSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSE  178 (313)
T ss_pred             HHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHH---HhCCEeccCcccceEEEeCCCCeEEeccCcccccccccccccccc
Confidence            9999987444 799999999999999999999   8999999999999999999 7999999999887444         


Q ss_pred             -ccCCCCCCCCCCCCC-CCC--CCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHH
Q 021659          189 -NYATMPHSSCPEDCS-TQD--CSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKEL  264 (309)
Q Consensus       189 -~~~~~~~~~~PE~~~-~~~--~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  264 (309)
                       ...||+.|+|||... +..  +++|||||||+++||+||+.||.........+.........     |.++.. -+.  
T Consensus       179 ~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~-----P~ip~~-ls~--  250 (313)
T KOG0198|consen  179 LSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSL-----PEIPDS-LSD--  250 (313)
T ss_pred             ccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCC-----CCCCcc-cCH--
Confidence             347899999999866 433  48999999999999999999998632222222222222222     222222 223  


Q ss_pred             HHHHHHHHHccCCCCCCCCChHHHHHHHh
Q 021659          265 KKLLAVARLCIKTKDKPTISIPQISRYLQ  293 (309)
Q Consensus       265 ~~l~~l~~~cl~~dp~~Rps~~evl~~L~  293 (309)
                       ...+++.+|+..||+.||||.+++...-
T Consensus       251 -~a~~Fl~~C~~~~p~~Rpta~eLL~hpf  278 (313)
T KOG0198|consen  251 -EAKDFLRKCFKRDPEKRPTAEELLEHPF  278 (313)
T ss_pred             -HHHHHHHHHhhcCcccCcCHHHHhhChh
Confidence             3445555999999999999999997654

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=4e-42  Score=307.17  Aligned_cols=234  Identities=18%  Similarity=0.252  Sum_probs=191.4

Q ss_pred             ccccccccCCCceEEEEEE-cCCcEEEEEEeccccccH----HHHHHHHHHHccC-CCCCcceEee-eEeCCeeEEEEee
Q 021659           41 GFHRIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEK----DAFYREIQLLGRL-HHRHLLALQG-FSTGRKRLLVFDN  113 (309)
Q Consensus        41 ~~~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~----~~~~~ei~~l~~l-~h~niv~~~~-~~~~~~~~lv~e~  113 (309)
                      .|.+.||+|+|++|++|+. ..++.||+|++.+...-+    +-+..|-+.|.+| .||.|++++- |.++...|+|+||
T Consensus        76 ~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~  155 (604)
T KOG0592|consen   76 KFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEY  155 (604)
T ss_pred             chhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEe
Confidence            3557999999999999995 568999999986543322    3467889999999 7999999998 5556889999999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-----
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-----  188 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-----  188 (309)
                      +++|+|.++|+.  .+.|++..+..++.+|+.||+||   |++|||||||||+|||++++++++|.|||.++.+.     
T Consensus       156 A~nGdll~~i~K--~Gsfde~caR~YAAeIldAleyl---H~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~  230 (604)
T KOG0592|consen  156 APNGDLLDLIKK--YGSFDETCARFYAAEILDALEYL---HSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKS  230 (604)
T ss_pred             cCCCcHHHHHHH--hCcchHHHHHHHHHHHHHHHHHH---HhcCceeccCChhheeEcCCCcEEEeeccccccCChhhcc
Confidence            999999999998  78999999999999999999999   89999999999999999999999999999987542     


Q ss_pred             ---------------ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccc
Q 021659          189 ---------------NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMI  251 (309)
Q Consensus       189 ---------------~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~  251 (309)
                                     ..+||..|.+||....  .++++|+|+|||++|+|+.|++||.+..++...-.........    
T Consensus       231 ~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~f----  306 (604)
T KOG0592|consen  231 QENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEF----  306 (604)
T ss_pred             ccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccC----
Confidence                           2478889999997544  4899999999999999999999999876554433333222222    


Q ss_pred             cCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          252 DPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       252 ~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                          +..++ ...+   +|+.+.|..||.+|+++.+|-+.
T Consensus       307 ----p~~fp-~~a~---dLv~KLLv~dp~~Rlt~~qIk~H  338 (604)
T KOG0592|consen  307 ----PEGFP-EDAR---DLIKKLLVRDPSDRLTSQQIKAH  338 (604)
T ss_pred             ----CCCCC-HHHH---HHHHHHHccCccccccHHHHhhC
Confidence                22222 2334   55559999999999999988753

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-41  Score=303.61  Aligned_cols=232  Identities=19%  Similarity=0.302  Sum_probs=193.2

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccccHH-HHHHHHHHHccCCCCCcceEee-eEeCCeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKD-AFYREIQLLGRLHHRHLLALQG-FSTGRKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~-~~~~ei~~l~~l~h~niv~~~~-~~~~~~~~lv~e~~~~~sL~  120 (309)
                      .+||+|+.|.||.+.- ..+..||+|.+......++ -+.+|+.+|+..+|+|||++++ |......|+||||+++|+|.
T Consensus       279 ~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLT  358 (550)
T KOG0578|consen  279 KKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLT  358 (550)
T ss_pred             hhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCchh
Confidence            4799999999999984 5688899999976655544 5789999999999999999999 55567899999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccCCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYATM  193 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~~~  193 (309)
                      |.+..   ..+++.+.+.++.++++||+||   |.+||+|+|||.+|||++.+|.+||+|||++..+.       ...||
T Consensus       359 DvVt~---~~~~E~qIA~Icre~l~aL~fL---H~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGT  432 (550)
T KOG0578|consen  359 DVVTK---TRMTEGQIAAICREILQGLKFL---HARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGT  432 (550)
T ss_pred             hhhhc---ccccHHHHHHHHHHHHHHHHHH---HhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCccccccCC
Confidence            99974   6699999999999999999999   89999999999999999999999999999986553       44799


Q ss_pred             CCCCCCCCC--CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHH
Q 021659          194 PHSSCPEDC--STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVA  271 (309)
Q Consensus       194 ~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~  271 (309)
                      +.|+|||..  ..++++.||||||++++||+.|++||-.+..+........  ...+++..+..    -   +..+.+++
T Consensus       433 PYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~--ng~P~lk~~~k----l---S~~~kdFL  503 (550)
T KOG0578|consen  433 PYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT--NGTPKLKNPEK----L---SPELKDFL  503 (550)
T ss_pred             CCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhh--cCCCCcCCccc----c---CHHHHHHH
Confidence            999999974  3468999999999999999999999987776665544332  22222222221    1   33444555


Q ss_pred             HHccCCCCCCCCChHHHHH
Q 021659          272 RLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       272 ~~cl~~dp~~Rps~~evl~  290 (309)
                      .+||+.|++.|+++.|+|+
T Consensus       504 ~~cL~~dv~~RasA~eLL~  522 (550)
T KOG0578|consen  504 DRCLVVDVEQRASAKELLE  522 (550)
T ss_pred             HHHhhcchhcCCCHHHHhc
Confidence            5999999999999999995

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.6e-41  Score=297.59  Aligned_cols=242  Identities=19%  Similarity=0.222  Sum_probs=192.1

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccccc---HHHHHHHHHHHccCCCCCcceEeeeEeC---CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLE---KDAFYREIQLLGRLHHRHLLALQGFSTG---RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~h~niv~~~~~~~~---~~~~lv~e~~~~  116 (309)
                      ++||+|.||.||+++. .+|++||+|++..+...   ..-..+||.+|++|.||||+++.+..++   ...|+|+|||+.
T Consensus       123 ~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdh  202 (560)
T KOG0600|consen  123 EKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDH  202 (560)
T ss_pred             HHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecccc
Confidence            4799999999999995 67999999999544322   2334689999999999999999997654   588999999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------  189 (309)
                       +|.-++... ...|++.++..++.|++.||.||   |.+||+|||||.+|||||.+|.+||+|||+|+++..       
T Consensus       203 -DL~GLl~~p-~vkft~~qIKc~mkQLl~Gl~~c---H~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T  277 (560)
T KOG0600|consen  203 -DLSGLLSSP-GVKFTEPQIKCYMKQLLEGLEYC---HSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYT  277 (560)
T ss_pred             -hhhhhhcCC-CcccChHHHHHHHHHHHHHHHHH---hhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCcccc
Confidence             998888652 56899999999999999999999   889999999999999999999999999999985543       


Q ss_pred             -cCCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccC--cCC-------
Q 021659          190 -YATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDP--DLG-------  256 (309)
Q Consensus       190 -~~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~-------  256 (309)
                       .+-|.=|.+||...+   ++.+.|+||.|||+.||++|++.|.+..++.|........+.-.+-.-+  .++       
T Consensus       278 ~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp  357 (560)
T KOG0600|consen  278 SRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKP  357 (560)
T ss_pred             cceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCC
Confidence             234456889997544   4789999999999999999999999998887775544333322111111  111       


Q ss_pred             -CCCC-------HHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          257 -GSYD-------SKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       257 -~~~~-------~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                       ..+.       -......++|+..+|..||..|.|+.+++.
T Consensus       358 ~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~  399 (560)
T KOG0600|consen  358 QQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ  399 (560)
T ss_pred             CCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence             0100       011345567777999999999999999874

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=1.2e-40  Score=292.72  Aligned_cols=253  Identities=20%  Similarity=0.255  Sum_probs=196.2

Q ss_pred             ccccccCHHHHHHhhcccccccccCCCceEEEEEEcCCcEEEEEEeccccccH----HHHHHHHHHHccCCCCCcceEee
Q 021659           25 CFIRRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEK----DAFYREIQLLGRLHHRHLLALQG  100 (309)
Q Consensus        25 ~~~~~~~~~~i~~~~~~~~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~----~~~~~ei~~l~~l~h~niv~~~~  100 (309)
                      ...+.++.++|.....   ..+++|+++.||+|.+ +|+.||+|.+.......    +.+.+|+.++++++||||++++|
T Consensus        10 ~~~~~i~~~~i~~~~~---~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g   85 (283)
T PHA02988         10 NDIKCIESDDIDKYTS---VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYG   85 (283)
T ss_pred             CcceecCHHHcCCCCC---eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEee
Confidence            3456667777743322   4699999999999998 68899999996544332    56779999999999999999999


Q ss_pred             eEeC-----CeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCc
Q 021659          101 FSTG-----RKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFT  175 (309)
Q Consensus       101 ~~~~-----~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~  175 (309)
                      ++.+     ...++||||+++|+|.+++..  ...+++..+..++.+++.||.+||.  ..+++||||+|+||+++.++.
T Consensus        86 ~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lH~--~~~~~Hrdlkp~nill~~~~~  161 (283)
T PHA02988         86 FIIDIVDDLPRLSLILEYCTRGYLREVLDK--EKDLSFKTKLDMAIDCCKGLYNLYK--YTNKPYKNLTSVSFLVTENYK  161 (283)
T ss_pred             eEEecccCCCceEEEEEeCCCCcHHHHHhh--CCCCChhHHHHHHHHHHHHHHHHHh--cCCCCCCcCChhhEEECCCCc
Confidence            7644     356799999999999999976  5678999999999999999999942  247889999999999999999


Q ss_pred             eeEeccccccccc----ccCCCCCCCCCCCCC----CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccc
Q 021659          176 AKLSDVGFFNSVR----NYATMPHSSCPEDCS----TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSI  247 (309)
Q Consensus       176 ~kl~dfg~~~~~~----~~~~~~~~~~PE~~~----~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~  247 (309)
                      +|++|||++....    ...++..|+|||...    ..+.++||||||+++|||++|+.||...... .........+. 
T Consensus       162 ~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~-~~~~~i~~~~~-  239 (283)
T PHA02988        162 LKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK-EIYDLIINKNN-  239 (283)
T ss_pred             EEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHhcCC-
Confidence            9999999987433    235678899999753    4578999999999999999999999865322 11111111111 


Q ss_pred             cccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhh
Q 021659          248 HRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNE  295 (309)
Q Consensus       248 ~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~  295 (309)
                          .+.++..    ....+.+++.+||+.||++|||+.|+++.|+..
T Consensus       240 ----~~~~~~~----~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~  279 (283)
T PHA02988        240 ----SLKLPLD----CPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY  279 (283)
T ss_pred             ----CCCCCCc----CcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence                1111111    233456666799999999999999999999854

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-40  Score=289.15  Aligned_cols=242  Identities=20%  Similarity=0.256  Sum_probs=198.8

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEecccccc--HHHHHHHHHHHccCCCCCcceEee-eEeCCeeEEEEeeCCCCC
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQALNLE--KDAFYREIQLLGRLHHRHLLALQG-FSTGRKRLLVFDNIENGS  118 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~--~~~~~~ei~~l~~l~h~niv~~~~-~~~~~~~~lv~e~~~~~s  118 (309)
                      ...||.|..++||+|.+ +.++.||+|++......  -+.+.+|+..+..++||||+.++. |..+...|+||.||.+||
T Consensus        31 ~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS  110 (516)
T KOG0582|consen   31 QEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGS  110 (516)
T ss_pred             EEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCCc
Confidence            36899999999999996 56899999999554433  467899999999999999999998 556788999999999999


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccc-----------c
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNS-----------V  187 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~-----------~  187 (309)
                      +.+.+...-...+++..+..++.++++||.||   |.+|.||||+|+.||||+++|.|||+|||.+.-           +
T Consensus       111 ~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YL---H~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf  187 (516)
T KOG0582|consen  111 LLDIIKTYYPDGLEEASIATILREVLKALDYL---HQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRF  187 (516)
T ss_pred             HHHHHHHHccccccHHHHHHHHHHHHHHHHHH---HhcCceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEee
Confidence            99999875556699999999999999999999   889999999999999999999999999987531           1


Q ss_pred             cccCCCCCCCCCCC----CCCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHH
Q 021659          188 RNYATMPHSSCPED----CSTQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKE  263 (309)
Q Consensus       188 ~~~~~~~~~~~PE~----~~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  263 (309)
                      ....+++.|+|||.    ..++++++||||||++..||.+|+.||..-....-++...+.......  ...+..+..-..
T Consensus       188 ~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~--t~~~~~d~~k~~  265 (516)
T KOG0582|consen  188 NTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLL--TSGLDKDEDKKF  265 (516)
T ss_pred             ccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcc--cccCChHHhhhh
Confidence            45689999999996    466799999999999999999999999977666655555443332222  111211111223


Q ss_pred             HHHHHHHHHHccCCCCCCCCChHHHH
Q 021659          264 LKKLLAVARLCIKTKDKPTISIPQIS  289 (309)
Q Consensus       264 ~~~l~~l~~~cl~~dp~~Rps~~evl  289 (309)
                      .+.+.+++..||++||..|||+++++
T Consensus       266 ~ksf~e~i~~CL~kDP~kRptAskLl  291 (516)
T KOG0582|consen  266 SKSFREMIALCLVKDPSKRPTASKLL  291 (516)
T ss_pred             cHHHHHHHHHHhhcCcccCCCHHHHh
Confidence            45777788899999999999999998

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-40  Score=285.97  Aligned_cols=224  Identities=23%  Similarity=0.336  Sum_probs=183.7

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccc----cHHHHHHHHHHHccCCCCCcceEee-eEeCCeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL----EKDAFYREIQLLGRLHHRHLLALQG-FSTGRKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~----~~~~~~~ei~~l~~l~h~niv~~~~-~~~~~~~~lv~e~~~~~  117 (309)
                      +.||+|+||+|+.++.. .++.+|+|++++...    +.+...+|..+|.+++||+|++++- |.+..+.|+|++|+.||
T Consensus        31 kviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~~GG  110 (357)
T KOG0598|consen   31 KVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYLNGG  110 (357)
T ss_pred             eeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEeccCCc
Confidence            68999999999999964 589999999965432    3456789999999999999999976 66668999999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc-------ccc
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-------RNY  190 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-------~~~  190 (309)
                      .|.-.++.  .+.+++..+..++.+|+.||.||   |++||+||||||+|||+|.+|+++|+|||+++..       ...
T Consensus       111 eLf~hL~~--eg~F~E~~arfYlaEi~lAL~~L---H~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~tf  185 (357)
T KOG0598|consen  111 ELFYHLQR--EGRFSEDRARFYLAEIVLALGYL---HSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDATRTF  185 (357)
T ss_pred             cHHHHHHh--cCCcchhHHHHHHHHHHHHHHHH---HhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCCccccc
Confidence            99999987  68899999999999999999999   8999999999999999999999999999999732       345


Q ss_pred             CCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHH
Q 021659          191 ATMPHSSCPEDC--STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL  268 (309)
Q Consensus       191 ~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~  268 (309)
                      .||+.|+|||..  .+++.++|-||||+++|+|++|.+||..... ......... ++      -.....+.+.+.++++
T Consensus       186 cGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~-~~~~~~I~~-~k------~~~~p~~ls~~ardll  257 (357)
T KOG0598|consen  186 CGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV-KKMYDKILK-GK------LPLPPGYLSEEARDLL  257 (357)
T ss_pred             cCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH-HHHHHHHhc-Cc------CCCCCccCCHHHHHHH
Confidence            899999999974  4458899999999999999999999986532 222222111 11      0111222344555555


Q ss_pred             HHHHHccCCCCCCCC
Q 021659          269 AVARLCIKTKDKPTI  283 (309)
Q Consensus       269 ~l~~~cl~~dp~~Rp  283 (309)
                      +   +.|..||+.|.
T Consensus       258 ~---~LL~rdp~~RL  269 (357)
T KOG0598|consen  258 K---KLLKRDPRQRL  269 (357)
T ss_pred             H---HHhccCHHHhc
Confidence            5   99999999996

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=1.8e-40  Score=298.72  Aligned_cols=242  Identities=18%  Similarity=0.254  Sum_probs=186.3

Q ss_pred             ccccccCCCceEEEEEE------cCCcEEEEEEeccccc--cHHHHHHHHHHHccC-CCCCcceEeeeEeC--CeeEEEE
Q 021659           43 HRIVYTNSHGAAYKARF------QDGEVALVKEIQALNL--EKDAFYREIQLLGRL-HHRHLLALQGFSTG--RKRLLVF  111 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~------~~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l-~h~niv~~~~~~~~--~~~~lv~  111 (309)
                      .+.||+|+||.||+|..      .+++.||+|++.....  ..+.+.+|+.+++++ +||||+++++++..  ...+++|
T Consensus        12 ~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~   91 (338)
T cd05102          12 GKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIV   91 (338)
T ss_pred             eeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEE
Confidence            46899999999999974      2356899999864322  235688999999999 89999999997764  4578999


Q ss_pred             eeCCCCCHHHhhcCCC------------------------------------------------------------CCCC
Q 021659          112 DNIENGSLKEHLNDPL------------------------------------------------------------KTPL  131 (309)
Q Consensus       112 e~~~~~sL~~~i~~~~------------------------------------------------------------~~~l  131 (309)
                      ||+++|+|.+++....                                                            ...+
T Consensus        92 ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  171 (338)
T cd05102          92 EFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPL  171 (338)
T ss_pred             ecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCCC
Confidence            9999999999886421                                                            1347


Q ss_pred             CHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---------ccCCCCCCCCCCCC
Q 021659          132 DWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---------NYATMPHSSCPEDC  202 (309)
Q Consensus       132 ~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---------~~~~~~~~~~PE~~  202 (309)
                      ++..+..++.|++.||.||   |+++++||||||+||+++.++.+||+|||++....         ...++..|+|||..
T Consensus       172 ~~~~~~~~~~qi~~aL~~L---H~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~  248 (338)
T cd05102         172 TMEDLICYSFQVARGMEFL---ASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESI  248 (338)
T ss_pred             CHHHHHHHHHHHHHHHHHH---HHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHh
Confidence            8889999999999999999   77899999999999999999999999999986432         12334679999964


Q ss_pred             C--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCC
Q 021659          203 S--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKD  279 (309)
Q Consensus       203 ~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp  279 (309)
                      .  ..+.++||||||+++|||++ |..||.+............. +..     ...+.    .....+.+++.+||+.||
T Consensus       249 ~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~-~~~-----~~~~~----~~~~~l~~li~~cl~~dp  318 (338)
T cd05102         249 FDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKD-GTR-----MRAPE----NATPEIYRIMLACWQGDP  318 (338)
T ss_pred             hcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhc-CCC-----CCCCC----CCCHHHHHHHHHHccCCh
Confidence            3  35789999999999999997 99999764322221111111 110     11111    113456677779999999


Q ss_pred             CCCCChHHHHHHHhhhhc
Q 021659          280 KPTISIPQISRYLQNEVD  297 (309)
Q Consensus       280 ~~Rps~~evl~~L~~~~~  297 (309)
                      ++|||+.|+++.|+++++
T Consensus       319 ~~RPs~~el~~~l~~~~~  336 (338)
T cd05102         319 KERPTFSALVEILGDLLQ  336 (338)
T ss_pred             hhCcCHHHHHHHHHHHHh
Confidence            999999999999998764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9.9e-40  Score=294.30  Aligned_cols=232  Identities=20%  Similarity=0.228  Sum_probs=188.8

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEeccc----c--ccHHHHHHHHHHHccCC-CCCcceEeeeEeC-CeeEEEEee
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQAL----N--LEKDAFYREIQLLGRLH-HRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~----~--~~~~~~~~ei~~l~~l~-h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      .+.||+|+||+|+.|.. .+++.||+|++...    .  ...+.+.+|+.+++.++ ||||++++++... ...|+||||
T Consensus        22 ~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy  101 (370)
T KOG0583|consen   22 GRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEY  101 (370)
T ss_pred             eeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEe
Confidence            36899999999999985 56899999976442    1  22456778999999998 9999999997754 678899999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC-CceeEecccccccc-----
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN-FTAKLSDVGFFNSV-----  187 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~-~~~kl~dfg~~~~~-----  187 (309)
                      +.+|+|.+++..  .+.+.+..+.+++.|+++|++||   |++||+||||||+|++++.+ +++||+|||++...     
T Consensus       102 ~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~---H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~  176 (370)
T KOG0583|consen  102 CSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYC---HSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGEDG  176 (370)
T ss_pred             cCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHH---HhCCEeeCCCCHHHEEecCCCCCEEEeccccccccCCCCC
Confidence            999999999987  68899999999999999999999   88899999999999999999 99999999998755     


Q ss_pred             --cccCCCCCCCCCCCCCC---C-CCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCH
Q 021659          188 --RNYATMPHSSCPEDCST---Q-DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDS  261 (309)
Q Consensus       188 --~~~~~~~~~~~PE~~~~---~-~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  261 (309)
                        ....|++.|+|||...+   + +.++||||+|++||.|++|..||.......-........-.++.++.         
T Consensus       177 ~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~~---------  247 (370)
T KOG0583|consen  177 LLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYLL---------  247 (370)
T ss_pred             cccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCCcC---------
Confidence              24589999999997554   2 57899999999999999999999874332222222222222222221         


Q ss_pred             HHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          262 KELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       262 ~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                        ..++..++.+||.+||..|+++.+++.
T Consensus       248 --S~~~~~Li~~mL~~~P~~R~t~~~i~~  274 (370)
T KOG0583|consen  248 --SPEARSLIEKMLVPDPSTRITLLEILE  274 (370)
T ss_pred             --CHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence              234556666999999999999999993

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=5.3e-40  Score=270.46  Aligned_cols=243  Identities=17%  Similarity=0.177  Sum_probs=195.6

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccccc---HHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLE---KDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~s  118 (309)
                      +.+|+|.||.||+|+. +.|+.||+|++......   .....+||+.|+.++|+||+.+++.+. .....+|+||++. +
T Consensus         8 ~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~t-d   86 (318)
T KOG0659|consen    8 EKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMPT-D   86 (318)
T ss_pred             hhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEeccc-c
Confidence            5799999999999995 67899999999655433   346789999999999999999999664 4677799999998 9


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccccc-------C
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNY-------A  191 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~-------~  191 (309)
                      |+..|++. ...++...+..++.++++|++||   |.+.|+||||||.|+|++.+|.+|++|||+++.+...       .
T Consensus        87 Le~vIkd~-~i~l~pa~iK~y~~m~LkGl~y~---H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~V  162 (318)
T KOG0659|consen   87 LEVVIKDK-NIILSPADIKSYMLMTLKGLAYC---HSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQV  162 (318)
T ss_pred             HHHHhccc-ccccCHHHHHHHHHHHHHHHHHH---HhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcccccce
Confidence            99999864 57899999999999999999999   8899999999999999999999999999999877533       3


Q ss_pred             CCCCCCCCCC---CCCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccc--ccccccc-------------C
Q 021659          192 TMPHSSCPED---CSTQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISS--SIHRMID-------------P  253 (309)
Q Consensus       192 ~~~~~~~PE~---~~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~--~~~~~~~-------------~  253 (309)
                      -|.=|.|||.   .+.++...|+||.||++.||+-|.+.|.+..++.|.......-+  .-..|.+             |
T Consensus       163 ~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P  242 (318)
T KOG0659|consen  163 VTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFP  242 (318)
T ss_pred             eeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCC
Confidence            4556889995   34458899999999999999999999999988887754322111  1111110             0


Q ss_pred             -cCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          254 -DLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       254 -~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                       ......-+.+..+.++++.+++.+||..|+++.|.++.
T Consensus       243 ~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~  281 (318)
T KOG0659|consen  243 KPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH  281 (318)
T ss_pred             CCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence             00111223345666888889999999999999998853

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-40  Score=271.78  Aligned_cols=243  Identities=16%  Similarity=0.197  Sum_probs=194.0

Q ss_pred             cccccccCCCceEEEEE-EcCCcEEEEEEecccc-ccHHHHHHHHHHHccCCCCCcceEeeeEeC------CeeEEEEee
Q 021659           42 FHRIVYTNSHGAAYKAR-FQDGEVALVKEIQALN-LEKDAFYREIQLLGRLHHRHLLALQGFSTG------RKRLLVFDN  113 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~-~~~~~~va~K~~~~~~-~~~~~~~~ei~~l~~l~h~niv~~~~~~~~------~~~~lv~e~  113 (309)
                      +++++|+|+|+.||.++ ..+++.||+|++.... .+.+..++|++..++++|||++++++++..      ...|++++|
T Consensus        25 i~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Py  104 (302)
T KOG2345|consen   25 IQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPY  104 (302)
T ss_pred             EeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeeh
Confidence            45789999999999999 4678899999995444 556788999999999999999999986531      347899999


Q ss_pred             CCCCCHHHhhcCC--CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCC--eeecccCCCceeeCCCCceeEeccccccccc-
Q 021659          114 IENGSLKEHLNDP--LKTPLDWKTRLQIAIGVAAALEYLLLFSNLP--MYYVSISSSSIMLDENFTAKLSDVGFFNSVR-  188 (309)
Q Consensus       114 ~~~~sL~~~i~~~--~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~--i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-  188 (309)
                      ...|||.+.++..  .+..+++.+.+.++.++++||++|   |+..  ++|+||||+||++++.+.+++.|||.+.... 
T Consensus       105 y~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~l---H~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i  181 (302)
T KOG2345|consen  105 YKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEAL---HEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPI  181 (302)
T ss_pred             hccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHH---hccCCcccccCCCcceeEecCCCceEEEeccCccccce
Confidence            9999999999753  345799999999999999999999   5555  9999999999999999999999999886543 


Q ss_pred             ---------------ccCCCCCCCCCCCCCCC-----CCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccc-c
Q 021659          189 ---------------NYATMPHSSCPEDCSTQ-----DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSS-I  247 (309)
Q Consensus       189 ---------------~~~~~~~~~~PE~~~~~-----~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~-~  247 (309)
                                     ...+|..|.|||.+.-.     ++++|||||||++|.|+.|..||....         ...+. .
T Consensus       182 ~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~---------~~GgSla  252 (302)
T KOG2345|consen  182 QIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIY---------QQGGSLA  252 (302)
T ss_pred             EeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHh---------hcCCeEE
Confidence                           23678999999975432     689999999999999999999996321         11111 1


Q ss_pred             cccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhh
Q 021659          248 HRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEV  296 (309)
Q Consensus       248 ~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~  296 (309)
                      -.+..+.+.-..++.....+.+++.+|++.||.+||++.+++..++++.
T Consensus       253 LAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li  301 (302)
T KOG2345|consen  253 LAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI  301 (302)
T ss_pred             EeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence            2222223322222224566777777999999999999999999998654

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.4e-40  Score=299.38  Aligned_cols=233  Identities=19%  Similarity=0.283  Sum_probs=193.6

Q ss_pred             cccccccCCCceEEEEEE-cCCcEEEEEEeccc----cccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCC
Q 021659           42 FHRIVYTNSHGAAYKARF-QDGEVALVKEIQAL----NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIE  115 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~----~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~  115 (309)
                      ..+-||+|+.|.|-+|++ ..|+.+|+|++...    ......+.+||-+|+-+.|||++++|+++.+ .+.|+|+||++
T Consensus        16 LgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~   95 (786)
T KOG0588|consen   16 LGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVP   95 (786)
T ss_pred             ccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecC
Confidence            345799999999999996 67999999999543    2334578999999999999999999997765 78899999999


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccc------cccc
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFN------SVRN  189 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~------~~~~  189 (309)
                      +|-|.+++..  .+++++.++.+++.||+.|+.||   |..+|+||||||.|+|++..+++||+|||+|.      .+.+
T Consensus        96 gGELFdylv~--kG~l~e~eaa~ff~QIi~gv~yC---H~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeT  170 (786)
T KOG0588|consen   96 GGELFDYLVR--KGPLPEREAAHFFRQILDGVSYC---HAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLET  170 (786)
T ss_pred             CchhHHHHHh--hCCCCCHHHHHHHHHHHHHHHHH---hhhcceeccCCchhhhhhcccCEeeeccceeecccCCccccc
Confidence            9999999987  78999999999999999999999   77889999999999999999999999999985      4457


Q ss_pred             cCCCCCCCCCCCCCCC---CCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          190 YATMPHSSCPEDCSTQ---DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~~---~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                      .+|+++|+|||...+.   +.++||||+|+|||.|+||+.||. +.++...+.....+.-  ++.      +.-+   .+
T Consensus       171 SCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFd-DdNir~LLlKV~~G~f--~MP------s~Is---~e  238 (786)
T KOG0588|consen  171 SCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFD-DDNIRVLLLKVQRGVF--EMP------SNIS---SE  238 (786)
T ss_pred             cCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCC-CccHHHHHHHHHcCcc--cCC------CcCC---HH
Confidence            7899999999986553   789999999999999999999998 4556655554433211  111      1112   33


Q ss_pred             HHHHHHHccCCCCCCCCChHHHHHH
Q 021659          267 LLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      ..+|+.+|+..||..|.|+.||+..
T Consensus       239 aQdLLr~ml~VDp~~RiT~~eI~kH  263 (786)
T KOG0588|consen  239 AQDLLRRMLDVDPSTRITTEEILKH  263 (786)
T ss_pred             HHHHHHHHhccCccccccHHHHhhC
Confidence            3455559999999999999999964

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=6.3e-39  Score=277.98  Aligned_cols=244  Identities=19%  Similarity=0.309  Sum_probs=196.3

Q ss_pred             HhhcccccccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCC
Q 021659           37 MATDGFHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIEN  116 (309)
Q Consensus        37 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~  116 (309)
                      ...-.+.+.||+|+||.||+|...+++.||+|.+.......+.+.+|++++++++|+||+++++++.+...++++||+.+
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~   84 (260)
T cd05067           5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEYMEN   84 (260)
T ss_pred             hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEEcCCC
Confidence            33444567999999999999998888999999997666667789999999999999999999998877788999999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------  189 (309)
                      ++|.+++.......+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++.++++|||++.....       
T Consensus        85 ~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~L---H~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~  161 (260)
T cd05067          85 GSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFI---ERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTARE  161 (260)
T ss_pred             CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---hcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCccccc
Confidence            9999998765456789999999999999999999   788999999999999999999999999999864431       


Q ss_pred             -cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHH
Q 021659          190 -YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELK  265 (309)
Q Consensus       190 -~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  265 (309)
                       ..++..|++||...  ..+.++||||||++++++++ |+.||...... ..........      .......    ...
T Consensus       162 ~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-~~~~~~~~~~------~~~~~~~----~~~  230 (260)
T cd05067         162 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP-EVIQNLERGY------RMPRPDN----CPE  230 (260)
T ss_pred             CCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH-HHHHHHHcCC------CCCCCCC----CCH
Confidence             12345799999653  34778999999999999999 99999754321 2121111110      0111111    124


Q ss_pred             HHHHHHHHccCCCCCCCCChHHHHHHHhh
Q 021659          266 KLLAVARLCIKTKDKPTISIPQISRYLQN  294 (309)
Q Consensus       266 ~l~~l~~~cl~~dp~~Rps~~evl~~L~~  294 (309)
                      .+.+++.+||..+|++||++.+++..|++
T Consensus       231 ~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         231 ELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             HHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            56677779999999999999999999985

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=2.4e-39  Score=289.69  Aligned_cols=230  Identities=17%  Similarity=0.183  Sum_probs=182.4

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||++.. .+++.||+|++....    .....+.+|+.++++++||||+.+++.+.. ...++||||++++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            3589999999999996 468899999986432    223467789999999999999999996654 6788999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc-------ccc
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-------RNY  190 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-------~~~  190 (309)
                      +|.+++..  ...+++..+..++.|++.||+||   |+.+++||||||+||+++.++.+||+|||++...       ...
T Consensus        81 ~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~l---H~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~  155 (323)
T cd05571          81 ELFFHLSR--ERVFSEDRARFYGAEIVSALGYL---HSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF  155 (323)
T ss_pred             cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccce
Confidence            99999876  56789999999999999999999   7889999999999999999999999999998642       123


Q ss_pred             CCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHH
Q 021659          191 ATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL  268 (309)
Q Consensus       191 ~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~  268 (309)
                      .+++.|+|||...+  .+.++|||||||++|+|++|+.||...............        +..++...    ...+.
T Consensus       156 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~--------~~~~p~~~----~~~~~  223 (323)
T cd05571         156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME--------EIRFPRTL----SPEAK  223 (323)
T ss_pred             ecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcC--------CCCCCCCC----CHHHH
Confidence            57899999997543  478999999999999999999999764322111111111        01111111    23455


Q ss_pred             HHHHHccCCCCCCCC-----ChHHHHH
Q 021659          269 AVARLCIKTKDKPTI-----SIPQISR  290 (309)
Q Consensus       269 ~l~~~cl~~dp~~Rp-----s~~evl~  290 (309)
                      +++.+||+.||++||     ++.++++
T Consensus       224 ~li~~~L~~dP~~R~~~~~~~~~~ll~  250 (323)
T cd05571         224 SLLAGLLKKDPKQRLGGGPEDAKEIME  250 (323)
T ss_pred             HHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence            666699999999999     7888874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=8.6e-39  Score=277.25  Aligned_cols=240  Identities=18%  Similarity=0.267  Sum_probs=192.4

Q ss_pred             ccccccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           41 GFHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        41 ~~~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      .+.+.||+|++|.||+|...+++.||+|.+.......+.+.+|++++++++|+||+++++++.. ...+++|||+++++|
T Consensus         9 ~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   88 (261)
T cd05068           9 QLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSL   88 (261)
T ss_pred             eeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcH
Confidence            3457899999999999998777889999987665566789999999999999999999997765 677899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccccc-----CC--
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNY-----AT--  192 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~-----~~--  192 (309)
                      .+++.......+++..+..++.+++.|+.+|   |+.+++||||+|+||+++.++.++|+|||++......     .+  
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  165 (261)
T cd05068          89 LEYLQGGAGRALKLPQLIDMAAQVASGMAYL---EAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAK  165 (261)
T ss_pred             HHHHhccCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCCc
Confidence            9999764445789999999999999999999   7889999999999999999999999999988654321     12  


Q ss_pred             -CCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHH
Q 021659          193 -MPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL  268 (309)
Q Consensus       193 -~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~  268 (309)
                       +..|++||...  ..+.++||||||+++++|++ |+.||.+........ .......      ...    .......+.
T Consensus       166 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~-~~~~~~~------~~~----~~~~~~~~~  234 (261)
T cd05068         166 FPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQ-QVDQGYR------MPC----PPGCPKELY  234 (261)
T ss_pred             CceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHH-HHHcCCC------CCC----CCcCCHHHH
Confidence             23699999653  34778999999999999999 999997654322111 1111100      001    111235667


Q ss_pred             HHHHHccCCCCCCCCChHHHHHHHhh
Q 021659          269 AVARLCIKTKDKPTISIPQISRYLQN  294 (309)
Q Consensus       269 ~l~~~cl~~dp~~Rps~~evl~~L~~  294 (309)
                      +++.+|++.+|++||++.+++..|++
T Consensus       235 ~li~~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         235 DIMLDCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             HHHHHHhhcCcccCCCHHHHHHHHhc
Confidence            78889999999999999999999985

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=4.8e-40  Score=297.15  Aligned_cols=242  Identities=22%  Similarity=0.285  Sum_probs=193.3

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEecccccc---HHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLE---KDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~~sL~  120 (309)
                      ..||+|+||+||+|+|-+  .||||++......   .+.|++|+..+++-+|.||+-+.|+|.+....+|+.+|+|.||+
T Consensus       398 ~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~AIiTqwCeGsSLY  475 (678)
T KOG0193|consen  398 ERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPLAIITQWCEGSSLY  475 (678)
T ss_pred             ceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCceeeeehhccCchhh
Confidence            579999999999999843  5899999654443   35799999999999999999999999887778999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc---------cccC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV---------RNYA  191 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~---------~~~~  191 (309)
                      .++... ...|...+...|+.|+++|+.||   |.++|||+|||..||++.+++.|||+|||++...         ....
T Consensus       476 ~hlHv~-etkfdm~~~idIAqQiaqGM~YL---HAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~  551 (678)
T KOG0193|consen  476 THLHVQ-ETKFDMNTTIDIAQQIAQGMDYL---HAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPH  551 (678)
T ss_pred             hhccch-hhhhhHHHHHHHHHHHHHhhhhh---hhhhhhhhhccccceEEccCCcEEEecccceeeeeeeccccccCCCc
Confidence            999753 46788889999999999999999   8999999999999999999999999999998533         2335


Q ss_pred             CCCCCCCCCCC-----CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          192 TMPHSSCPEDC-----STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       192 ~~~~~~~PE~~-----~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                      +...|+|||..     ..+++++||||||+++|||+||..||. ...-.+-+...-.     ....+.+. ....+..++
T Consensus       552 gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~dqIifmVGr-----G~l~pd~s-~~~s~~pk~  624 (678)
T KOG0193|consen  552 GSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQNRDQIIFMVGR-----GYLMPDLS-KIRSNCPKA  624 (678)
T ss_pred             cchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCChhheEEEecc-----cccCccch-hhhccCHHH
Confidence            56789999964     345899999999999999999999998 3332222211111     11112211 112233456


Q ss_pred             HHHHHHHccCCCCCCCCChHHHHHHHhhhhcc
Q 021659          267 LLAVARLCIKTKDKPTISIPQISRYLQNEVDI  298 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~  298 (309)
                      +.+|+..||.+++++||...+|+..|+.++..
T Consensus       625 mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~  656 (678)
T KOG0193|consen  625 MKRLLSDCWKFDREERPLFPQLLSKLEELLPS  656 (678)
T ss_pred             HHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence            66666799999999999999999999877663

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.5e-39  Score=287.30  Aligned_cols=228  Identities=18%  Similarity=0.200  Sum_probs=179.6

Q ss_pred             cccCCCceEEEEEEc-CCcEEEEEEeccc----cccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           46 VYTNSHGAAYKARFQ-DGEVALVKEIQAL----NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        46 lg~G~~~~v~~~~~~-~~~~va~K~~~~~----~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      ||+|+||.||++... +++.||+|.+...    ......+.+|++++++++||||+++++++.+ ...++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            699999999999974 5789999998532    2234567889999999999999999997654 678899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYAT  192 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~~  192 (309)
                      .+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.++|+|||++....       ...+
T Consensus        81 ~~~l~~--~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g  155 (312)
T cd05585          81 FHHLQR--EGRFDLSRARFYTAELLCALENL---HKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCG  155 (312)
T ss_pred             HHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccC
Confidence            999976  56799999999999999999999   78899999999999999999999999999986421       2357


Q ss_pred             CCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          193 MPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       193 ~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      ++.|+|||...+  .+.++|||||||++|+|++|+.||...... +....... ..      ..++...    ...+.++
T Consensus       156 t~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~-~~~~~~~~-~~------~~~~~~~----~~~~~~l  223 (312)
T cd05585         156 TPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVN-EMYRKILQ-EP------LRFPDGF----DRDAKDL  223 (312)
T ss_pred             CcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHH-HHHHHHHc-CC------CCCCCcC----CHHHHHH
Confidence            889999997543  478899999999999999999999764322 22211111 00      1111111    2345566


Q ss_pred             HHHccCCCCCCCCC---hHHHHH
Q 021659          271 ARLCIKTKDKPTIS---IPQISR  290 (309)
Q Consensus       271 ~~~cl~~dp~~Rps---~~evl~  290 (309)
                      +.+||..||++||+   +.|++.
T Consensus       224 i~~~L~~dp~~R~~~~~~~e~l~  246 (312)
T cd05585         224 LIGLLSRDPTRRLGYNGAQEIKN  246 (312)
T ss_pred             HHHHcCCCHHHcCCCCCHHHHHc
Confidence            66999999999985   556553

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-39  Score=286.44  Aligned_cols=239  Identities=24%  Similarity=0.272  Sum_probs=190.6

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccccc---------------HHHHHHHHHHHccCCCCCcceEeeeEeC---
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLE---------------KDAFYREIQLLGRLHHRHLLALQGFSTG---  104 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~---------------~~~~~~ei~~l~~l~h~niv~~~~~~~~---  104 (309)
                      +.||+|.||.|-+|.. .+++.||+|++......               .+...+||.+|+++.|||||+++.+.++   
T Consensus       103 ~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLDDP~s  182 (576)
T KOG0585|consen  103 KEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLDDPES  182 (576)
T ss_pred             hhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeecCccc
Confidence            4799999999999996 56899999999542211               2467899999999999999999998875   


Q ss_pred             CeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccc
Q 021659          105 RKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFF  184 (309)
Q Consensus       105 ~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~  184 (309)
                      ...|+|+|||..|.+...-.+  ...+++.++.+++.+++.||+||   |.+||+||||||+|+|++++|++||+|||.+
T Consensus       183 ~~~YlVley~s~G~v~w~p~d--~~els~~~Ar~ylrDvv~GLEYL---H~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs  257 (576)
T KOG0585|consen  183 DKLYLVLEYCSKGEVKWCPPD--KPELSEQQARKYLRDVVLGLEYL---HYQGIIHRDIKPSNLLLSSDGTVKISDFGVS  257 (576)
T ss_pred             CceEEEEEeccCCccccCCCC--cccccHHHHHHHHHHHHHHHHHH---HhcCeeccccchhheEEcCCCcEEeecccee
Confidence            678999999998888665443  22399999999999999999999   8899999999999999999999999999998


Q ss_pred             ccc------------cccCCCCCCCCCCCCCC------CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccc
Q 021659          185 NSV------------RNYATMPHSSCPEDCST------QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSS  246 (309)
Q Consensus       185 ~~~------------~~~~~~~~~~~PE~~~~------~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~  246 (309)
                      ..+            ....|||.|+|||...+      .+++.||||+|++||.|+.|+.||-++..+..+-...     
T Consensus       258 ~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIv-----  332 (576)
T KOG0585|consen  258 NEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIV-----  332 (576)
T ss_pred             eecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHh-----
Confidence            644            13479999999997544      2688999999999999999999998775543333222     


Q ss_pred             ccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          247 IHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       247 ~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                           ...+......+....+.+++.++|++||+.|.+..+|.....-.-+
T Consensus       333 -----n~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~  378 (576)
T KOG0585|consen  333 -----NDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD  378 (576)
T ss_pred             -----cCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence                 2222222222334556666669999999999999998766543333

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=3.6e-39  Score=289.26  Aligned_cols=231  Identities=16%  Similarity=0.238  Sum_probs=183.3

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      .+.||+|+||.||+|+.. +++.||+|.+....    ...+.+.+|+.++++++||||+++++.+.+ ...++||||+++
T Consensus        23 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~  102 (329)
T PTZ00263         23 GETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVG  102 (329)
T ss_pred             EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCC
Confidence            368999999999999974 57899999985432    223568899999999999999999997654 778899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc----cCC
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN----YAT  192 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~----~~~  192 (309)
                      ++|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++.....    ..+
T Consensus       103 ~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~g  177 (329)
T PTZ00263        103 GELFTHLRK--AGRFPNDVAKFYHAELVLAFEYL---HSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTLCG  177 (329)
T ss_pred             ChHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCcceecC
Confidence            999999976  56788999999999999999999   788999999999999999999999999999875432    357


Q ss_pred             CCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          193 MPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       193 ~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      ++.|+|||....  .+.++|||||||++|+|++|+.||.+............  +.      ...+.. .+   ..+.++
T Consensus       178 t~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~--~~------~~~p~~-~~---~~~~~l  245 (329)
T PTZ00263        178 TPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILA--GR------LKFPNW-FD---GRARDL  245 (329)
T ss_pred             ChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhc--CC------cCCCCC-CC---HHHHHH
Confidence            889999997543  47889999999999999999999976543222111111  10      011111 11   334566


Q ss_pred             HHHccCCCCCCCCC-----hHHHHH
Q 021659          271 ARLCIKTKDKPTIS-----IPQISR  290 (309)
Q Consensus       271 ~~~cl~~dp~~Rps-----~~evl~  290 (309)
                      +.+||+.||++||+     +.+++.
T Consensus       246 i~~~L~~dP~~R~~~~~~~~~~ll~  270 (329)
T PTZ00263        246 VKGLLQTDHTKRLGTLKGGVADVKN  270 (329)
T ss_pred             HHHHhhcCHHHcCCCCCCCHHHHhc
Confidence            66999999999997     577763

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=1.2e-38  Score=280.29  Aligned_cols=234  Identities=17%  Similarity=0.267  Sum_probs=183.0

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc----cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL----EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~----~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||++.. .+++.||+|.+.....    ....+.+|+.++.+++|+||+.+++.+.+ ...++|+||+++|
T Consensus         6 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~g   85 (285)
T cd05631           6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNGG   85 (285)
T ss_pred             EEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCCC
Confidence            6899999999999996 5689999998854321    22457789999999999999999997654 6788999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------ccC
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------NYA  191 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------~~~  191 (309)
                      +|.+++.......+++..+..++.|++.||.||   |+.+++||||||+||+++.++.++|+|||++....      ...
T Consensus        86 ~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~  162 (285)
T cd05631          86 DLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDL---QRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGRV  162 (285)
T ss_pred             cHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHH---HhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecCCC
Confidence            999888654345789999999999999999999   78899999999999999999999999999986532      235


Q ss_pred             CCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHH--HHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          192 TMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLI--QWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       192 ~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ++..|+|||...  ..+.++|||||||++|+|++|+.||.......  ..+.......      ........    ...+
T Consensus       163 g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~------~~~~~~~~----s~~~  232 (285)
T cd05631         163 GTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKED------QEEYSEKF----SEDA  232 (285)
T ss_pred             CCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcc------cccCCccC----CHHH
Confidence            788999999754  35788999999999999999999997643211  1111110000      00111111    2345


Q ss_pred             HHHHHHccCCCCCCCCC-----hHHHHH
Q 021659          268 LAVARLCIKTKDKPTIS-----IPQISR  290 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps-----~~evl~  290 (309)
                      .+++.+||..||++||+     +.++++
T Consensus       233 ~~li~~~l~~~P~~R~~~~~~~~~~~~~  260 (285)
T cd05631         233 KSICRMLLTKNPKERLGCRGNGAAGVKQ  260 (285)
T ss_pred             HHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence            56667999999999997     677775

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=1.8e-38  Score=275.15  Aligned_cols=239  Identities=18%  Similarity=0.295  Sum_probs=192.2

Q ss_pred             cccccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCCCCHHH
Q 021659           42 FHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKE  121 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~~sL~~  121 (309)
                      +.+.||+|++|.||++...++..+|+|.+.......+.+.+|+.++++++|+|++++++++.....+++|||+++++|.+
T Consensus        10 ~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~~~L~~   89 (260)
T cd05070          10 LIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTEYMSKGSLLD   89 (260)
T ss_pred             hhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEEecCCCcHHH
Confidence            34689999999999999888888999998765556678999999999999999999999887777899999999999999


Q ss_pred             hhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc--------cCCC
Q 021659          122 HLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN--------YATM  193 (309)
Q Consensus       122 ~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~--------~~~~  193 (309)
                      ++.......+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++.++++|||++.....        ..++
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~l~~al~~l---H~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  166 (260)
T cd05070          90 FLKDGEGRALKLPNLVDMAAQVAAGMAYI---ERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFP  166 (260)
T ss_pred             HHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCCCCC
Confidence            99764456689999999999999999999   778899999999999999999999999999865432        1234


Q ss_pred             CCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          194 PHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       194 ~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      ..|++||...  ..+.++|+||||+++++|++ |..||.+..... .........      .+..    .......+.++
T Consensus       167 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~-~~~~~~~~~------~~~~----~~~~~~~~~~l  235 (260)
T cd05070         167 IKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE-VLEQVERGY------RMPC----PQDCPISLHEL  235 (260)
T ss_pred             ccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH-HHHHHHcCC------CCCC----CCcCCHHHHHH
Confidence            5699999643  34788999999999999999 889987643221 111111100      0111    11223456677


Q ss_pred             HHHccCCCCCCCCChHHHHHHHhh
Q 021659          271 ARLCIKTKDKPTISIPQISRYLQN  294 (309)
Q Consensus       271 ~~~cl~~dp~~Rps~~evl~~L~~  294 (309)
                      +.+|+.++|++|||+.++.+.|++
T Consensus       236 i~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         236 MLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             HHHHcccCcccCcCHHHHHHHHhc
Confidence            779999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=1.2e-38  Score=276.34  Aligned_cols=238  Identities=16%  Similarity=0.259  Sum_probs=190.1

Q ss_pred             ccccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHHH
Q 021659           43 HRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLKE  121 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~~  121 (309)
                      .++||+|++|.||+|...++..|++|.+.......+.+.+|+.++++++|+||+++++.+.+ ...++++||+++++|.+
T Consensus        11 ~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   90 (261)
T cd05072          11 VKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLD   90 (261)
T ss_pred             eeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHH
Confidence            36899999999999998788889999886555556789999999999999999999997654 66789999999999999


Q ss_pred             hhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccccc--------CCC
Q 021659          122 HLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNY--------ATM  193 (309)
Q Consensus       122 ~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~--------~~~  193 (309)
                      ++.......+++..+..++.+++.||+||   |+.+++|+||+|+||+++.++.++++|||++......        .++
T Consensus        91 ~l~~~~~~~~~~~~~~~~~~~l~~~l~~L---H~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  167 (261)
T cd05072          91 FLKSDEGGKVLLPKLIDFSAQIAEGMAYI---ERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP  167 (261)
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccccchhhEEecCCCcEEECCCccceecCCCceeccCCCccc
Confidence            99764456788999999999999999999   7789999999999999999999999999998754321        234


Q ss_pred             CCCCCCCCCCC--CCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          194 PHSSCPEDCST--QDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       194 ~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      ..|++||....  .++++||||||+++|+|++ |+.||........ ........      .......    ....+.++
T Consensus       168 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~-~~~~~~~~------~~~~~~~----~~~~~~~l  236 (261)
T cd05072         168 IKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDV-MSALQRGY------RMPRMEN----CPDELYDI  236 (261)
T ss_pred             eecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHH-HHHHHcCC------CCCCCCC----CCHHHHHH
Confidence            56999996533  4678999999999999998 9999976432211 11111100      0111111    12456677


Q ss_pred             HHHccCCCCCCCCChHHHHHHHhh
Q 021659          271 ARLCIKTKDKPTISIPQISRYLQN  294 (309)
Q Consensus       271 ~~~cl~~dp~~Rps~~evl~~L~~  294 (309)
                      +.+||..+|++||++.++.+.|++
T Consensus       237 i~~~l~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         237 MKTCWKEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             HHHHccCCcccCcCHHHHHHHHhc
Confidence            779999999999999999999985

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=2.6e-38  Score=274.69  Aligned_cols=241  Identities=16%  Similarity=0.287  Sum_probs=193.4

Q ss_pred             cccccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCCCCHHH
Q 021659           42 FHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKE  121 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~~sL~~  121 (309)
                      +.+.||+|++|.||+|+..++..|++|.+.......+.+.+|++++++++|+||+++++++.+...++||||+++++|.+
T Consensus        10 ~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~~~L~~   89 (262)
T cd05071          10 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLD   89 (262)
T ss_pred             EeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEEcCCCCcHHH
Confidence            45789999999999999877677999998765555678999999999999999999999877777889999999999999


Q ss_pred             hhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc--------cCCC
Q 021659          122 HLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN--------YATM  193 (309)
Q Consensus       122 ~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~--------~~~~  193 (309)
                      ++.......+++..+..++.+++.||.+|   |+.+++|+||+|.||+++.++.++|+|||.+.....        ..++
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~l~~aL~~l---H~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~  166 (262)
T cd05071          90 FLKGEMGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP  166 (262)
T ss_pred             HHhhccccCCCHHHHHHHHHHHHHHHHHH---HHCCccccccCcccEEEcCCCcEEeccCCceeeccccccccccCCccc
Confidence            99754345688999999999999999999   788999999999999999999999999998864321        1234


Q ss_pred             CCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          194 PHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       194 ~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      ..|++||...  ..+.++||||||+++|+|++ |..||......... .......      ..    .........+.++
T Consensus       167 ~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~-~~~~~~~------~~----~~~~~~~~~l~~l  235 (262)
T cd05071         167 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGY------RM----PCPPECPESLHDL  235 (262)
T ss_pred             ceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHH-HHHhcCC------CC----CCccccCHHHHHH
Confidence            5699999653  34788999999999999999 88888765432211 1111100      00    0112234567788


Q ss_pred             HHHccCCCCCCCCChHHHHHHHhhhh
Q 021659          271 ARLCIKTKDKPTISIPQISRYLQNEV  296 (309)
Q Consensus       271 ~~~cl~~dp~~Rps~~evl~~L~~~~  296 (309)
                      +.+|++++|++||++.++++.|++..
T Consensus       236 i~~~l~~~p~~Rp~~~~~~~~l~~~~  261 (262)
T cd05071         236 MCQCWRKEPEERPTFEYLQAFLEDYF  261 (262)
T ss_pred             HHHHccCCcccCCCHHHHHHHHHHhc
Confidence            88999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=1.9e-38  Score=275.51  Aligned_cols=240  Identities=18%  Similarity=0.250  Sum_probs=191.0

Q ss_pred             cccccccCCCceEEEEEEc-CCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           42 FHRIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      +.+.||+|++|.||+|... .+..+++|.+.........+.+|++++++++|+||+++++++.. ...+++|||+++++|
T Consensus        10 ~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   89 (263)
T cd05052          10 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL   89 (263)
T ss_pred             EeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcH
Confidence            3468999999999999974 47889999987665556788999999999999999999997764 667899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccccc--------C
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNY--------A  191 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~--------~  191 (309)
                      .+++.......+++..+..++.|++.||++|   |+++++||||+|+||+++.++.+||+|||++......        .
T Consensus        90 ~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~l---H~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~  166 (263)
T cd05052          90 LDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK  166 (263)
T ss_pred             HHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCEeecccCcceEEEcCCCcEEeCCCccccccccceeeccCCCC
Confidence            9999765456789999999999999999999   7889999999999999999999999999998654321        1


Q ss_pred             CCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHH
Q 021659          192 TMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL  268 (309)
Q Consensus       192 ~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~  268 (309)
                      .+..|++||...  ..+.++||||||+++|+|++ |..||.+... ......... .     ..+......    ...+.
T Consensus       167 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-~~~~~~~~~-~-----~~~~~~~~~----~~~~~  235 (263)
T cd05052         167 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELLEK-G-----YRMERPEGC----PPKVY  235 (263)
T ss_pred             CccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHC-C-----CCCCCCCCC----CHHHH
Confidence            245799999643  34778999999999999998 8999875432 222111111 0     011111111    24566


Q ss_pred             HHHHHccCCCCCCCCChHHHHHHHhhh
Q 021659          269 AVARLCIKTKDKPTISIPQISRYLQNE  295 (309)
Q Consensus       269 ~l~~~cl~~dp~~Rps~~evl~~L~~~  295 (309)
                      +++.+||..+|++|||+.++++.|++.
T Consensus       236 ~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         236 ELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             HHHHHHccCCcccCCCHHHHHHHHHhh
Confidence            677799999999999999999999865

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.9e-39  Score=286.11  Aligned_cols=232  Identities=18%  Similarity=0.223  Sum_probs=183.9

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      .+.||+|+||.||++... +++.||+|.+....    ...+.+.+|++++++++||||+++++++.+ ...++||||+++
T Consensus         6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   85 (291)
T cd05612           6 IKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPG   85 (291)
T ss_pred             eeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCC
Confidence            368999999999999974 68899999985432    123568899999999999999999997654 678899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc----cCC
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN----YAT  192 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~----~~~  192 (309)
                      ++|.+++..  ...+++..+..++.|++.||.||   |+++++||||+|+||+++.++.+||+|||++.....    ..+
T Consensus        86 ~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~g  160 (291)
T cd05612          86 GELFSYLRN--SGRFSNSTGLFYASEIVCALEYL---HSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLCG  160 (291)
T ss_pred             CCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCcccccC
Confidence            999999976  56789999999999999999999   788999999999999999999999999999875432    357


Q ss_pred             CCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          193 MPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       193 ~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      ++.|+|||....  .+.++||||||+++|+|++|+.||.+...... ...... ..      ...+...    ...+.++
T Consensus       161 t~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~-~~~i~~-~~------~~~~~~~----~~~~~~l  228 (291)
T cd05612         161 TPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGI-YEKILA-GK------LEFPRHL----DLYAKDL  228 (291)
T ss_pred             ChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHh-CC------cCCCccC----CHHHHHH
Confidence            889999996433  47889999999999999999999976543221 111111 00      1111111    2244566


Q ss_pred             HHHccCCCCCCCCC-----hHHHHHH
Q 021659          271 ARLCIKTKDKPTIS-----IPQISRY  291 (309)
Q Consensus       271 ~~~cl~~dp~~Rps-----~~evl~~  291 (309)
                      +.+||+.||.+||+     +.++++.
T Consensus       229 i~~~l~~dp~~R~~~~~~~~~~~l~h  254 (291)
T cd05612         229 IKKLLVVDRTRRLGNMKNGADDVKNH  254 (291)
T ss_pred             HHHHcCCCHHHccCCccCCHHHHhcC
Confidence            66999999999995     8887744

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=2.8e-38  Score=274.02  Aligned_cols=239  Identities=18%  Similarity=0.294  Sum_probs=191.6

Q ss_pred             cccccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCCCCHHH
Q 021659           42 FHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKE  121 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~~sL~~  121 (309)
                      +.+.||+|++|.||++...++..+++|.+.......+.+.+|++++++++|+|++++++++.....+++|||+.+++|.+
T Consensus        10 ~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~L~~   89 (260)
T cd05069          10 LDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMGKGSLLD   89 (260)
T ss_pred             eeeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEcCCCCCHHH
Confidence            44689999999999999877778999988665555678899999999999999999999887777889999999999999


Q ss_pred             hhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccccc--------CCC
Q 021659          122 HLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNY--------ATM  193 (309)
Q Consensus       122 ~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~--------~~~  193 (309)
                      ++.......+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++.++|+|||++......        .++
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~l~~al~~l---H~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  166 (260)
T cd05069          90 FLKEGDGKYLKLPQLVDMAAQIADGMAYI---ERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFP  166 (260)
T ss_pred             HHhhCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCccc
Confidence            99764455689999999999999999999   7889999999999999999999999999998654221        234


Q ss_pred             CCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          194 PHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       194 ~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      ..|++||...  ..+.++|+||||+++|+|++ |+.||.+......... .....      .+..    .......+.++
T Consensus       167 ~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~-~~~~~------~~~~----~~~~~~~~~~l  235 (260)
T cd05069         167 IKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQ-VERGY------RMPC----PQGCPESLHEL  235 (260)
T ss_pred             hhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HHcCC------CCCC----CcccCHHHHHH
Confidence            5699999643  34778999999999999999 8999976543322111 11110      0111    11123456677


Q ss_pred             HHHccCCCCCCCCChHHHHHHHhh
Q 021659          271 ARLCIKTKDKPTISIPQISRYLQN  294 (309)
Q Consensus       271 ~~~cl~~dp~~Rps~~evl~~L~~  294 (309)
                      +.+||..||++||++.++++.|++
T Consensus       236 i~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         236 MKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             HHHHccCCcccCcCHHHHHHHHhc
Confidence            779999999999999999999985

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=1e-38  Score=285.58  Aligned_cols=230  Identities=17%  Similarity=0.183  Sum_probs=181.2

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||++.. .++..||+|.+....    .....+.+|++++++++||||+++++++. +...++||||++++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            3589999999999996 468899999985432    22345678999999999999999998665 46788999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc-------ccc
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-------RNY  190 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-------~~~  190 (309)
                      +|..++..  ...+++..+..++.|++.||.||   |+++++||||||+||+++.++.+||+|||++...       ...
T Consensus        81 ~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~  155 (323)
T cd05595          81 ELFFHLSR--ERVFTEERARFYGAEIVSALEYL---HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF  155 (323)
T ss_pred             cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccc
Confidence            99998876  46789999999999999999999   7889999999999999999999999999987642       123


Q ss_pred             CCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHH
Q 021659          191 ATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL  268 (309)
Q Consensus       191 ~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~  268 (309)
                      .+++.|+|||....  .+.++|||||||++|+|++|+.||................        ..++...    ...+.
T Consensus       156 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~--------~~~p~~~----~~~~~  223 (323)
T cd05595         156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE--------IRFPRTL----SPEAK  223 (323)
T ss_pred             cCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--------CCCCCCC----CHHHH
Confidence            57889999997543  4788999999999999999999997553322111111111        1111122    23445


Q ss_pred             HHHHHccCCCCCCCC-----ChHHHHH
Q 021659          269 AVARLCIKTKDKPTI-----SIPQISR  290 (309)
Q Consensus       269 ~l~~~cl~~dp~~Rp-----s~~evl~  290 (309)
                      +++.+||+.||++||     ++.++++
T Consensus       224 ~li~~~L~~dP~~R~~~~~~~~~~~l~  250 (323)
T cd05595         224 SLLAGLLKKDPKQRLGGGPSDAKEVME  250 (323)
T ss_pred             HHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence            666699999999998     7888764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9.4e-40  Score=287.91  Aligned_cols=243  Identities=15%  Similarity=0.208  Sum_probs=195.4

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHH--HHHHHHHccCC-CCCcceEeeeEeC-C-eeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAF--YREIQLLGRLH-HRHLLALQGFSTG-R-KRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~--~~ei~~l~~l~-h~niv~~~~~~~~-~-~~~lv~e~~~~~  117 (309)
                      ++||.|+||.||+|+. +++..||+|..+..-...++.  .+|+..|++|+ |||||++.+.+.+ . ..|+|||||+- 
T Consensus        16 ~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md~-   94 (538)
T KOG0661|consen   16 RKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMDC-   94 (538)
T ss_pred             HHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhhh-
Confidence            6899999999999995 678999999986655555554  47999999998 9999999996644 4 78899999987 


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------ccC
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------NYA  191 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------~~~  191 (309)
                      +|.++++.+ +..|++..+..|+.||++||+|+   |++|+.|||+||+|||+..+..+||+|||+|+...      .++
T Consensus        95 NLYqLmK~R-~r~fse~~irnim~QilqGL~hi---Hk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYTeYV  170 (538)
T KOG0661|consen   95 NLYQLMKDR-NRLFSESDIRNIMYQILQGLAHI---HKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYTEYV  170 (538)
T ss_pred             hHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHH---HhcCcccccCChhheEecccceeEecccccccccccCCCcchhh
Confidence            999999987 78999999999999999999999   89999999999999999999999999999997553      457


Q ss_pred             CCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHh--ccccccccccc------------Cc
Q 021659          192 TMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQES--SISSSIHRMID------------PD  254 (309)
Q Consensus       192 ~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~--~~~~~~~~~~~------------~~  254 (309)
                      .|.=|.|||....   ++...|+|++||+++|+.+-++.|.+..++++..+.-  ........+..            |.
T Consensus       171 STRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~  250 (538)
T KOG0661|consen  171 STRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQ  250 (538)
T ss_pred             hcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCc
Confidence            7788999996433   4789999999999999999999999887776654321  11111111100            00


Q ss_pred             CC----CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          255 LG----GSYDSKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       255 l~----~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      ..    ...-++...+.++++.+|+.-||+.||||.+.++.
T Consensus       251 ~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~  291 (538)
T KOG0661|consen  251 VKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH  291 (538)
T ss_pred             CCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence            00    11112356777888889999999999999998854

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=2.1e-38  Score=284.22  Aligned_cols=231  Identities=16%  Similarity=0.191  Sum_probs=182.6

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||++.. .+++.||+|.+....    .....+.+|+.+++.++||||+++++++.. ...++||||++++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            3689999999999996 458899999985432    223567889999999999999999987654 6788999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------cc
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NY  190 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~  190 (309)
                      +|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....       ..
T Consensus        81 ~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~L---H~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~  155 (328)
T cd05593          81 ELFFHLSR--ERVFSEDRTRFYGAEIVSALDYL---HSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTF  155 (328)
T ss_pred             CHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccc
Confidence            99998876  56799999999999999999999   78899999999999999999999999999976421       23


Q ss_pred             CCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHH
Q 021659          191 ATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL  268 (309)
Q Consensus       191 ~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~  268 (309)
                      .+++.|+|||...  ..+.++|||||||++|+|++|+.||....... ....... .      ...++...    ..++.
T Consensus       156 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~-~~~~~~~-~------~~~~p~~~----~~~~~  223 (328)
T cd05593         156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK-LFELILM-E------DIKFPRTL----SADAK  223 (328)
T ss_pred             cCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHH-HHHHhcc-C------CccCCCCC----CHHHH
Confidence            5788999999754  34789999999999999999999997543221 1111110 0      11111111    23455


Q ss_pred             HHHHHccCCCCCCCC-----ChHHHHHH
Q 021659          269 AVARLCIKTKDKPTI-----SIPQISRY  291 (309)
Q Consensus       269 ~l~~~cl~~dp~~Rp-----s~~evl~~  291 (309)
                      +++.+||+.||++||     ++.++++.
T Consensus       224 ~li~~~L~~dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         224 SLLSGLLIKDPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             HHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence            666699999999997     78888753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=6.6e-38  Score=270.94  Aligned_cols=236  Identities=20%  Similarity=0.294  Sum_probs=188.5

Q ss_pred             cccccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           42 FHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      +.+.||+|+||.||++.+.++..+|+|.+.......+.+.+|++++++++||||+++++++.. ...++||||+++++|.
T Consensus         8 ~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~   87 (256)
T cd05114           8 FMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLL   87 (256)
T ss_pred             EeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHH
Confidence            346899999999999998888889999887666666789999999999999999999998765 6778999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc--------cCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN--------YAT  192 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~--------~~~  192 (309)
                      +++... ...+++..+..++.+++.||.||   |+++++|+||+|+||+++.++.++++|||.+.....        ..+
T Consensus        88 ~~~~~~-~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~  163 (256)
T cd05114          88 NYLRQR-QGKLSKDMLLSMCQDVCEGMEYL---ERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKF  163 (256)
T ss_pred             HHHHhC-ccCCCHHHHHHHHHHHHHHHHHH---HHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCCC
Confidence            998653 24688999999999999999999   788999999999999999999999999998864321        123


Q ss_pred             CCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHH
Q 021659          193 MPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLA  269 (309)
Q Consensus       193 ~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~  269 (309)
                      +..|.|||...  ..+.++|+||||+++|+|++ |+.||...... ..+.......   ....+..    .   ...+.+
T Consensus       164 ~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~-~~~~~i~~~~---~~~~~~~----~---~~~~~~  232 (256)
T cd05114         164 PVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY-EVVEMISRGF---RLYRPKL----A---SMTVYE  232 (256)
T ss_pred             chhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHCCC---CCCCCCC----C---CHHHHH
Confidence            34799999753  34788999999999999999 89999765432 2222211111   0111111    1   235667


Q ss_pred             HHHHccCCCCCCCCChHHHHHHH
Q 021659          270 VARLCIKTKDKPTISIPQISRYL  292 (309)
Q Consensus       270 l~~~cl~~dp~~Rps~~evl~~L  292 (309)
                      ++.+||..+|++||++.++++.|
T Consensus       233 li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         233 VMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             HHHHHccCCcccCcCHHHHHHhh
Confidence            77799999999999999999886

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=1.3e-39  Score=305.21  Aligned_cols=247  Identities=23%  Similarity=0.320  Sum_probs=197.0

Q ss_pred             cccccccCCCceEEEEEE------cCCcEEEEEEecccccc--HHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEe
Q 021659           42 FHRIVYTNSHGAAYKARF------QDGEVALVKEIQALNLE--KDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFD  112 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~------~~~~~va~K~~~~~~~~--~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e  112 (309)
                      |.+.||+|.||+||+|+.      ++...||||.++.....  +++|.+|++++..|+|||||+++|+|.. ...++|+|
T Consensus       490 ~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFE  569 (774)
T KOG1026|consen  490 FKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFE  569 (774)
T ss_pred             ehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEE
Confidence            446899999999999994      34568999999654443  5689999999999999999999999986 56679999


Q ss_pred             eCCCCCHHHhhcCC--------CCC----CCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEec
Q 021659          113 NIENGSLKEHLNDP--------LKT----PLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSD  180 (309)
Q Consensus       113 ~~~~~sL~~~i~~~--------~~~----~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~d  180 (309)
                      ||+.|+|.+++...        ++.    +++..+.+.++.||+.|+.||   .+..++||||-.+|.||+++-.|||+|
T Consensus       570 Ym~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YL---s~~~FVHRDLATRNCLVge~l~VKIsD  646 (774)
T KOG1026|consen  570 YMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYL---SSHHFVHRDLATRNCLVGENLVVKISD  646 (774)
T ss_pred             ecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHH---HhCcccccchhhhhceeccceEEEecc
Confidence            99999999999641        223    388999999999999999999   788899999999999999999999999


Q ss_pred             cccccccc---------ccCCCCCCCCCCC--CCCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhccccccc
Q 021659          181 VGFFNSVR---------NYATMPHSSCPED--CSTQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIH  248 (309)
Q Consensus       181 fg~~~~~~---------~~~~~~~~~~PE~--~~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~  248 (309)
                      ||+++..-         ...-..+|++||.  +..++..|||||||++|||+++ |+.|+.+..+  +.+.+....+.+ 
T Consensus       647 fGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn--~EVIe~i~~g~l-  723 (774)
T KOG1026|consen  647 FGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSN--QEVIECIRAGQL-  723 (774)
T ss_pred             cccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccch--HHHHHHHHcCCc-
Confidence            99986331         2223468999995  5667999999999999999997 9999876432  122222222222 


Q ss_pred             ccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcccccc
Q 021659          249 RMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCYK  302 (309)
Q Consensus       249 ~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~~~  302 (309)
                              -+.+.+...++-+|+..||+.+|++||++.||...|+....-....
T Consensus       724 --------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~~~  769 (774)
T KOG1026|consen  724 --------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASPKY  769 (774)
T ss_pred             --------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCccc
Confidence                    1122233456667777999999999999999999999876655443

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=4.5e-38  Score=278.95  Aligned_cols=244  Identities=17%  Similarity=0.245  Sum_probs=182.1

Q ss_pred             cccccccCCCceEEEEEEcC-----------------CcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeE
Q 021659           42 FHRIVYTNSHGAAYKARFQD-----------------GEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFS  102 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~-----------------~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~  102 (309)
                      +.+.||+|+||.||++.+.+                 +..||+|.+.....  ....+.+|++++.+++||||+++++++
T Consensus         9 ~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~   88 (304)
T cd05096           9 FKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVC   88 (304)
T ss_pred             eeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEEEE
Confidence            34689999999999997532                 33699998864322  245789999999999999999999977


Q ss_pred             eC-CeeEEEEeeCCCCCHHHhhcCCC-----------------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccC
Q 021659          103 TG-RKRLLVFDNIENGSLKEHLNDPL-----------------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSIS  164 (309)
Q Consensus       103 ~~-~~~~lv~e~~~~~sL~~~i~~~~-----------------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~  164 (309)
                      .+ ...++||||+++++|.+++....                 ...+++..+..++.|++.||.||   |+.+++|+|||
T Consensus        89 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~l---H~~~ivH~dlk  165 (304)
T cd05096          89 VDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYL---SSLNFVHRDLA  165 (304)
T ss_pred             ecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH---HHCCccccCcc
Confidence            64 67789999999999999885421                 13477889999999999999999   77899999999


Q ss_pred             CCceeeCCCCceeEecccccccccc---------cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh--CCCCCCCC
Q 021659          165 SSSIMLDENFTAKLSDVGFFNSVRN---------YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT--GQSPEEGD  231 (309)
Q Consensus       165 p~nill~~~~~~kl~dfg~~~~~~~---------~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t--g~~p~~~~  231 (309)
                      |+||+++.++.+||+|||++.....         ..++..|+|||...  ..+.++||||||+++|+|++  +..||...
T Consensus       166 p~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~  245 (304)
T cd05096         166 TRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGEL  245 (304)
T ss_pred             hhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcC
Confidence            9999999999999999999864321         23356799999643  35789999999999999986  56677643


Q ss_pred             ccH--HHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhh
Q 021659          232 VDL--IQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQN  294 (309)
Q Consensus       232 ~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~  294 (309)
                      ...  ............. .. ....    .+.....+.+++.+||..||++|||+.+|.+.|++
T Consensus       246 ~~~~~~~~~~~~~~~~~~-~~-~~~~----~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~  304 (304)
T cd05096         246 TDEQVIENAGEFFRDQGR-QV-YLFR----PPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE  304 (304)
T ss_pred             CHHHHHHHHHHHhhhccc-cc-cccC----CCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence            221  1111111110000 00 0000    11123456777779999999999999999998863

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.5e-38  Score=283.27  Aligned_cols=240  Identities=16%  Similarity=0.176  Sum_probs=186.8

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      .+.||+|+||.||+|+.. +++.||+|++....    ...+.+..|++++.+++||||+++++.+.+ ...|+||||+++
T Consensus         6 ~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g   85 (333)
T cd05600           6 LTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPG   85 (333)
T ss_pred             EEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCC
Confidence            368999999999999975 57899999986432    123567889999999999999999997754 678899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc----ccCC
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----NYAT  192 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----~~~~  192 (309)
                      ++|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....    ...+
T Consensus        86 ~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~~g  160 (333)
T cd05600          86 GDFRTLLNN--LGVLSEDHARFYMAEMFEAVDAL---HELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSVVG  160 (333)
T ss_pred             CCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCccc
Confidence            999999976  56789999999999999999999   78899999999999999999999999999987543    3467


Q ss_pred             CCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          193 MPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       193 ~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      ++.|+|||...  ..+.++|||||||++|+|++|..||..................   ...+... .........+.++
T Consensus       161 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~---~~~~~~~-~~~~~~s~~~~~l  236 (333)
T cd05600         161 SPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKET---LQRPVYD-DPRFNLSDEAWDL  236 (333)
T ss_pred             CccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhcccc---ccCCCCC-ccccccCHHHHHH
Confidence            88999999743  3478999999999999999999999765332211111100000   0011110 0001123455566


Q ss_pred             HHHccCCCCCCCCChHHHHHH
Q 021659          271 ARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       271 ~~~cl~~dp~~Rps~~evl~~  291 (309)
                      +.+||..+|++||++.++++.
T Consensus       237 i~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         237 ITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             HHHHhhChhhhcCCHHHHHhC
Confidence            779999999999999999854

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=1.9e-38  Score=274.63  Aligned_cols=235  Identities=18%  Similarity=0.244  Sum_probs=185.8

Q ss_pred             ccccCCCceEEEEEE---cCCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCCCC
Q 021659           45 IVYTNSHGAAYKARF---QDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGS  118 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~---~~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~~s  118 (309)
                      .||+|+||.||+|.+   .++..+|+|++.....   ..+.+..|+.+++.+.||||+++++++.....++||||+++++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~   81 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELGP   81 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCCc
Confidence            589999999999975   3578899998854332   2457889999999999999999999988778899999999999


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccccc--------
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNY--------  190 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~--------  190 (309)
                      |.+++..  ...+++..+.+++.|++.||.+|   |+++++||||+|+||+++.++.++|+|||++......        
T Consensus        82 L~~~l~~--~~~~~~~~~~~i~~qi~~al~~l---H~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  156 (257)
T cd05116          82 LNKFLQK--NKHVTEKNITELVHQVSMGMKYL---EETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKT  156 (257)
T ss_pred             HHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecC
Confidence            9999975  46789999999999999999999   7889999999999999999999999999998644221        


Q ss_pred             --CCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHH
Q 021659          191 --ATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELK  265 (309)
Q Consensus       191 --~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  265 (309)
                        .++..|++||...  ..+.++|+||||+++|||++ |+.||..... ........ .+..     +..+...    ..
T Consensus       157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-~~~~~~i~-~~~~-----~~~~~~~----~~  225 (257)
T cd05116         157 HGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG-NEVTQMIE-SGER-----MECPQRC----PP  225 (257)
T ss_pred             CCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHH-CCCC-----CCCCCCC----CH
Confidence              2235799999653  34678999999999999998 9999975432 12222111 1111     1111112    24


Q ss_pred             HHHHHHHHccCCCCCCCCChHHHHHHHhhh
Q 021659          266 KLLAVARLCIKTKDKPTISIPQISRYLQNE  295 (309)
Q Consensus       266 ~l~~l~~~cl~~dp~~Rps~~evl~~L~~~  295 (309)
                      .+.+++.+||++||++||++.+|...|++.
T Consensus       226 ~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~  255 (257)
T cd05116         226 EMYDLMKLCWTYGVDERPGFAVVELRLRNY  255 (257)
T ss_pred             HHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence            456677799999999999999999999863

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2.9e-39  Score=279.98  Aligned_cols=232  Identities=19%  Similarity=0.284  Sum_probs=191.3

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccccH----HHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEK----DAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~----~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|.||+|-++.. ..|+.||+|.+..+....    -.+.+||+++..|+||||+.++.++.+ ....+||||..+|
T Consensus        59 etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~G  138 (668)
T KOG0611|consen   59 ETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASGG  138 (668)
T ss_pred             HHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCCc
Confidence            4699999999999985 679999999996654432    357899999999999999999997766 6788999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc------cccC
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV------RNYA  191 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~------~~~~  191 (309)
                      .|++|+..  .+.+++.++..++.||.+|+.||   |+++++|||||..|||+|.++++||+|||++.++      ..+.
T Consensus       139 eLYDYiSe--r~~LsErEaRhfFRQIvSAVhYC---HknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqTFC  213 (668)
T KOG0611|consen  139 ELYDYISE--RGSLSEREARHFFRQIVSAVHYC---HKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQTFC  213 (668)
T ss_pred             cHHHHHHH--hccccHHHHHHHHHHHHHHHHHH---hhccceecccchhheeecCCCCeeeeccchhhhhccccHHHHhc
Confidence            99999987  68999999999999999999999   9999999999999999999999999999998644      4678


Q ss_pred             CCCCCCCCCCCCCC---CCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHH
Q 021659          192 TMPHSSCPEDCSTQ---DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL  268 (309)
Q Consensus       192 ~~~~~~~PE~~~~~---~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~  268 (309)
                      |++-|++||+..+.   ++..|.||||++||-|+.|..||.+... ...+.+... +   ....|..+     ....   
T Consensus       214 GSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh-k~lvrQIs~-G---aYrEP~~P-----SdA~---  280 (668)
T KOG0611|consen  214 GSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH-KRLVRQISR-G---AYREPETP-----SDAS---  280 (668)
T ss_pred             CCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH-HHHHHHhhc-c---cccCCCCC-----chHH---
Confidence            99999999986553   6889999999999999999999987542 122222211 1   11222221     1233   


Q ss_pred             HHHHHccCCCCCCCCChHHHHHHHh
Q 021659          269 AVARLCIKTKDKPTISIPQISRYLQ  293 (309)
Q Consensus       269 ~l~~~cl~~dp~~Rps~~evl~~L~  293 (309)
                      -++.+||..||++|.|+.+|.....
T Consensus       281 gLIRwmLmVNP~RRATieDiAsHWW  305 (668)
T KOG0611|consen  281 GLIRWMLMVNPERRATIEDIASHWW  305 (668)
T ss_pred             HHHHHHHhcCcccchhHHHHhhhhe
Confidence            4555999999999999999987653

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=2.5e-38  Score=274.17  Aligned_cols=238  Identities=20%  Similarity=0.326  Sum_probs=191.1

Q ss_pred             ccccccCCCceEEEEEEcCCcEEEEEEeccccc-cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           43 HRIVYTNSHGAAYKARFQDGEVALVKEIQALNL-EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~-~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      .+.||.|++|.||+|...++..+++|.+..... ..+.+.+|+.+++.++|+||+++++++.. ...++||||+++++|.
T Consensus        11 ~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   90 (261)
T cd05148          11 ERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLL   90 (261)
T ss_pred             hhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCHH
Confidence            368999999999999988899999999865443 45678999999999999999999997765 6678999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------cCCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------YATM  193 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------~~~~  193 (309)
                      +++.......+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++.+|++|||.+.....       ..++
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~i~~al~~l---H~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~  167 (261)
T cd05148          91 AFLRSPEGQVLPVASLIDMACQVAEGMAYL---EEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIP  167 (261)
T ss_pred             HHHhcCCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccccCcceEEEcCCceEEEccccchhhcCCccccccCCCCc
Confidence            999875567789999999999999999999   778999999999999999999999999998864432       1234


Q ss_pred             CCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          194 PHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       194 ~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      ..|.+||...  ..+.++||||||+++++|++ |+.||...... ..........      .+..    .......+.++
T Consensus       168 ~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~-~~~~~~~~~~------~~~~----~~~~~~~~~~~  236 (261)
T cd05148         168 YKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH-EVYDQITAGY------RMPC----PAKCPQEIYKI  236 (261)
T ss_pred             eEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH-HHHHHHHhCC------cCCC----CCCCCHHHHHH
Confidence            5689999643  34778999999999999998 89999754321 1111111110      0111    11223456678


Q ss_pred             HHHccCCCCCCCCChHHHHHHHhh
Q 021659          271 ARLCIKTKDKPTISIPQISRYLQN  294 (309)
Q Consensus       271 ~~~cl~~dp~~Rps~~evl~~L~~  294 (309)
                      +.+||+.||++|||+.++++.|++
T Consensus       237 i~~~l~~~p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         237 MLECWAAEPEDRPSFKALREELDN  260 (261)
T ss_pred             HHHHcCCCchhCcCHHHHHHHHhc
Confidence            889999999999999999999985

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=3e-39  Score=289.79  Aligned_cols=237  Identities=19%  Similarity=0.254  Sum_probs=193.0

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccccc---HHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLE---KDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~s  118 (309)
                      +.||+|+||.||+|+-+ +...||+|.+.+....   -+.+.+|+++++.|+||||+.+++++. ..+.++|+||+.| +
T Consensus         8 e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g-~   86 (808)
T KOG0597|consen    8 EMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG-D   86 (808)
T ss_pred             HHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh-h
Confidence            57999999999999954 5788999999543333   345789999999999999999999665 5788999999987 9


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------cC
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------YA  191 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------~~  191 (309)
                      |..++..  ++.++++.+..++.++++||.||   |+++|+|+|+||+||++.+++.+|+||||+++-.+.       ..
T Consensus        87 L~~il~~--d~~lpEe~v~~~a~~LVsaL~yL---hs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsik  161 (808)
T KOG0597|consen   87 LFTILEQ--DGKLPEEQVRAIAYDLVSALYYL---HSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIK  161 (808)
T ss_pred             HHHHHHh--ccCCCHHHHHHHHHHHHHHHHHH---HhcCcccccCCcceeeecCCCceeechhhhhhhcccCceeeeecc
Confidence            9999988  78899999999999999999999   889999999999999999999999999999986543       36


Q ss_pred             CCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHH
Q 021659          192 TMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLA  269 (309)
Q Consensus       192 ~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~  269 (309)
                      |||.|+|||...+  ++..+|.|||||++||+++|++||.. ..+.+.+.....        +|..   +++.....+.+
T Consensus       162 GtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a-~si~~Lv~~I~~--------d~v~---~p~~~S~~f~n  229 (808)
T KOG0597|consen  162 GTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA-RSITQLVKSILK--------DPVK---PPSTASSSFVN  229 (808)
T ss_pred             CcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH-HHHHHHHHHHhc--------CCCC---CcccccHHHHH
Confidence            8999999997544  57899999999999999999999974 333444433221        1111   12244556667


Q ss_pred             HHHHccCCCCCCCCChHHHH--HHHhhhhcc
Q 021659          270 VARLCIKTKDKPTISIPQIS--RYLQNEVDI  298 (309)
Q Consensus       270 l~~~cl~~dp~~Rps~~evl--~~L~~~~~~  298 (309)
                      ++...|.+||..|.|..+++  ...++...+
T Consensus       230 fl~gLL~kdP~~RltW~~Ll~HpF~k~~~~~  260 (808)
T KOG0597|consen  230 FLQGLLIKDPAQRLTWTDLLGHPFWKGKINI  260 (808)
T ss_pred             HHHHHhhcChhhcccHHHHhcChHHhhhhhh
Confidence            77799999999999999988  344444443

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=5.7e-39  Score=286.54  Aligned_cols=234  Identities=20%  Similarity=0.295  Sum_probs=190.4

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc---ccHHHHHHHHHHHccCCCCCcceEee-eEeCCe-eEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN---LEKDAFYREIQLLGRLHHRHLLALQG-FSTGRK-RLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~---~~~~~~~~ei~~l~~l~h~niv~~~~-~~~~~~-~~lv~e~~~~~  117 (309)
                      +.+|+|+||.++.++. .++..+++|.+....   ..++....|+.++++++|||||.+.+ |..++. .++||+|++||
T Consensus        10 ~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg   89 (426)
T KOG0589|consen   10 RQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGG   89 (426)
T ss_pred             hhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCCC
Confidence            6899999999999996 356789999995433   33456789999999999999999999 445555 78999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------cc
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NY  190 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~  190 (309)
                      ++.+.+....+.-+++..+..++.|++.|+.||   |++.|+|||||++||+++.++.|+|+|||+++...       ..
T Consensus        90 ~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~yl---H~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~tv  166 (426)
T KOG0589|consen   90 DLAQLIKEQKGVLFPEERILKWFVQILLAVNYL---HENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLASTV  166 (426)
T ss_pred             CHHHHHHHHhhccccHHHHHHHHHHHHHHHHHH---HhhhhhcccchhhhhhccccCceeecchhhhhhcCCchhhhhee
Confidence            999999876678899999999999999999999   78899999999999999999999999999998664       35


Q ss_pred             CCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHH
Q 021659          191 ATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL  268 (309)
Q Consensus       191 ~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~  268 (309)
                      .||+.|++||...+  ++.++|+|||||++|||++-+.+|... +....+.....     ....| + ...+   +.++.
T Consensus       167 vGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~-~m~~Li~ki~~-----~~~~P-l-p~~y---s~el~  235 (426)
T KOG0589|consen  167 VGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKAS-NMSELILKINR-----GLYSP-L-PSMY---SSELR  235 (426)
T ss_pred             cCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCcc-chHHHHHHHhh-----ccCCC-C-Cccc---cHHHH
Confidence            79999999997554  589999999999999999999999854 23333322211     11111 1 1223   34444


Q ss_pred             HHHHHccCCCCCCCCChHHHHHH
Q 021659          269 AVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       269 ~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      .++..|+..+|..||++.+++..
T Consensus       236 ~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  236 SLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             HHHHHHhhcCCccCCCHHHHhhC
Confidence            55559999999999999999854

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.9e-40  Score=286.05  Aligned_cols=230  Identities=22%  Similarity=0.296  Sum_probs=189.4

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEee-eEeCCeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQG-FSTGRKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~-~~~~~~~~lv~e~~~~~sL  119 (309)
                      +.||.|+||.||+|.. ..++.||+|++....  .+.+.+..|+.+|.+++++||.++|+ |..+...+++||||.+|++
T Consensus        19 ~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGsv   98 (467)
T KOG0201|consen   19 ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGSV   98 (467)
T ss_pred             hhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcch
Confidence            6899999999999996 568999999996544  34568899999999999999999999 4455778899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc-------cccCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-------RNYAT  192 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-------~~~~~  192 (309)
                      .+.+..  +..+.+....-++.+++.|+.||   |..+.+|+|||++||++..+|.+|++|||.+...       ....|
T Consensus        99 ~~lL~~--~~~~~E~~i~~ilre~l~~l~yl---H~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfvG  173 (467)
T KOG0201|consen   99 LDLLKS--GNILDEFEIAVILREVLKGLDYL---HSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTFVG  173 (467)
T ss_pred             hhhhcc--CCCCccceeeeehHHHHHHhhhh---hhcceecccccccceeEeccCcEEEEecceeeeeechhhccccccc
Confidence            999987  45558888888999999999999   8889999999999999999999999999987533       45689


Q ss_pred             CCCCCCCCCC--CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          193 MPHSSCPEDC--STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       193 ~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      |+.|+|||..  .+++.++||||||++.+||++|.+|+......       ..--.++.-..|.+.+.    ..+.+.++
T Consensus       174 TPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPm-------rvlflIpk~~PP~L~~~----~S~~~kEF  242 (467)
T KOG0201|consen  174 TPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPM-------RVLFLIPKSAPPRLDGD----FSPPFKEF  242 (467)
T ss_pred             cccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcc-------eEEEeccCCCCCccccc----cCHHHHHH
Confidence            9999999964  35689999999999999999999999764331       11112233334444442    23445566


Q ss_pred             HHHccCCCCCCCCChHHHH
Q 021659          271 ARLCIKTKDKPTISIPQIS  289 (309)
Q Consensus       271 ~~~cl~~dp~~Rps~~evl  289 (309)
                      +..||++||+.||+|.+++
T Consensus       243 V~~CL~k~P~~RpsA~~LL  261 (467)
T KOG0201|consen  243 VEACLDKNPEFRPSAKELL  261 (467)
T ss_pred             HHHHhhcCcccCcCHHHHh
Confidence            6699999999999999988

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=1.1e-38  Score=290.94  Aligned_cols=241  Identities=18%  Similarity=0.248  Sum_probs=184.4

Q ss_pred             cccccccCCCceEEEEEE------cCCcEEEEEEecccc--ccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEE
Q 021659           42 FHRIVYTNSHGAAYKARF------QDGEVALVKEIQALN--LEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVF  111 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~------~~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~  111 (309)
                      +.+.||+|+||.||+|.+      .++..||+|++....  ...+.+.+|+.++..+ +||||+++++++.. ...++||
T Consensus        39 ~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~  118 (375)
T cd05104          39 FGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVIT  118 (375)
T ss_pred             hhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeee
Confidence            347899999999999973      235689999985432  2345688999999999 89999999998765 6788999


Q ss_pred             eeCCCCCHHHhhcCCC----------------------------------------------------------------
Q 021659          112 DNIENGSLKEHLNDPL----------------------------------------------------------------  127 (309)
Q Consensus       112 e~~~~~sL~~~i~~~~----------------------------------------------------------------  127 (309)
                      ||+++|+|.+++....                                                                
T Consensus       119 E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (375)
T cd05104         119 EYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQD  198 (375)
T ss_pred             hhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecccc
Confidence            9999999998885321                                                                


Q ss_pred             ---------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc---------
Q 021659          128 ---------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN---------  189 (309)
Q Consensus       128 ---------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~---------  189 (309)
                               ...+++..+..++.+++.||.||   |+.+++||||||+||+++.++.+||+|||++.....         
T Consensus       199 ~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~  275 (375)
T cd05104         199 VTSEILEEDELALDTEDLLSFSYQVAKGMSFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGN  275 (375)
T ss_pred             cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccccCC
Confidence                     12578889999999999999999   778999999999999999999999999999864321         


Q ss_pred             cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          190 YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                      ...+..|+|||....  .++++||||||+++++|++ |..||............... +..     +.. ....   ..+
T Consensus       276 ~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~-~~~-----~~~-~~~~---~~~  345 (375)
T cd05104         276 ARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKE-GYR-----MLS-PECA---PSE  345 (375)
T ss_pred             CCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHh-Ccc-----CCC-CCCC---CHH
Confidence            122356999997533  4789999999999999998 88898754322222211111 100     000 1111   234


Q ss_pred             HHHHHHHccCCCCCCCCChHHHHHHHhhh
Q 021659          267 LLAVARLCIKTKDKPTISIPQISRYLQNE  295 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rps~~evl~~L~~~  295 (309)
                      +.+++.+||+.||++|||+.|+++.|++.
T Consensus       346 l~~li~~cl~~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         346 MYDIMKSCWDADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             HHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence            56677799999999999999999999864

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=3.7e-38  Score=282.02  Aligned_cols=230  Identities=17%  Similarity=0.228  Sum_probs=180.9

Q ss_pred             cccccCCCceEEEEEE----cCCcEEEEEEecccc-----ccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEee
Q 021659           44 RIVYTNSHGAAYKARF----QDGEVALVKEIQALN-----LEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~----~~~~~va~K~~~~~~-----~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~  113 (309)
                      +.||+|+||.||+++.    ..++.||+|.+....     .....+..|+++++.++||||+++++++. +...|+||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            5699999999999985    357889999986432     22345778999999999999999998665 4678899999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-----
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-----  188 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-----  188 (309)
                      +++++|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....     
T Consensus        82 ~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  156 (323)
T cd05584          82 LSGGELFMHLER--EGIFMEDTACFYLSEISLALEHL---HQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTV  156 (323)
T ss_pred             CCCchHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCc
Confidence            999999999976  56788899999999999999999   78899999999999999999999999999875321     


Q ss_pred             --ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHH
Q 021659          189 --NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKEL  264 (309)
Q Consensus       189 --~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  264 (309)
                        ...+++.|+|||....  .+.++||||||+++|+|++|+.||........ ...... +.      ..++...    .
T Consensus       157 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~-~~~~~~-~~------~~~~~~~----~  224 (323)
T cd05584         157 THTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKT-IDKILK-GK------LNLPPYL----T  224 (323)
T ss_pred             ccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHH-HHHHHc-CC------CCCCCCC----C
Confidence              2357889999997543  46889999999999999999999986543222 111111 10      0111111    2


Q ss_pred             HHHHHHHHHccCCCCCCCC-----ChHHHHH
Q 021659          265 KKLLAVARLCIKTKDKPTI-----SIPQISR  290 (309)
Q Consensus       265 ~~l~~l~~~cl~~dp~~Rp-----s~~evl~  290 (309)
                      ..+.+++.+||++||++||     ++.++++
T Consensus       225 ~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~  255 (323)
T cd05584         225 PEARDLLKKLLKRNPSSRLGAGPGDAAEVQS  255 (323)
T ss_pred             HHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence            3455666699999999999     7777765

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=9.1e-39  Score=285.30  Aligned_cols=227  Identities=19%  Similarity=0.238  Sum_probs=179.1

Q ss_pred             cccccCCCceEEEEEE----cCCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCC
Q 021659           44 RIVYTNSHGAAYKARF----QDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIE  115 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~----~~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~  115 (309)
                      +.||+|+||.||+++.    .+++.||+|++.....   ....+..|++++++++||||+++++++.+ ...|+||||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            4699999999999974    3578999999864322   23457789999999999999999997654 67889999999


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------  188 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------  188 (309)
                      +++|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....       
T Consensus        82 ~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~  156 (318)
T cd05582          82 GGDLFTRLSK--EVMFTEEDVKFYLAELALALDHL---HSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY  156 (318)
T ss_pred             CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCcee
Confidence            9999999976  56799999999999999999999   78899999999999999999999999999986432       


Q ss_pred             ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          189 NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       189 ~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                      ...+++.|++||...  ..+.++||||||+++|+|++|+.||.................        .++...    ...
T Consensus       157 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~--------~~p~~~----~~~  224 (318)
T cd05582         157 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKL--------GMPQFL----SPE  224 (318)
T ss_pred             cccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCC--------CCCCCC----CHH
Confidence            234678899999753  347889999999999999999999976543222111111100        111111    234


Q ss_pred             HHHHHHHccCCCCCCCCChHH
Q 021659          267 LLAVARLCIKTKDKPTISIPQ  287 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rps~~e  287 (309)
                      +.+++.+||+.||++||++.+
T Consensus       225 ~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         225 AQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             HHHHHHHHhhcCHhHcCCCCC
Confidence            556666999999999999654

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=7.3e-38  Score=271.21  Aligned_cols=239  Identities=17%  Similarity=0.300  Sum_probs=193.0

Q ss_pred             cccccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           42 FHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      +.+.||+|++|.||++..+++..+++|.+.......+.+.+|++++++++|+||+++++++.. ...+++|||+++++|.
T Consensus        10 i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~   89 (261)
T cd05034          10 LERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLL   89 (261)
T ss_pred             eeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCCHH
Confidence            346899999999999998778889999997666667889999999999999999999998765 6778999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc--------cCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN--------YAT  192 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~--------~~~  192 (309)
                      +++.......+++..+..++.+++.|+.||   |+++++|+||+|+||+++.++.++++|||++.....        ...
T Consensus        90 ~~i~~~~~~~~~~~~~~~~~~~i~~al~~l---h~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~  166 (261)
T cd05034          90 DFLKSGEGKKLRLPQLVDMAAQIAEGMAYL---ESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKF  166 (261)
T ss_pred             HHHhccccCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCcchheEEEcCCCCEEECccccceeccchhhhhhhccCC
Confidence            999765456799999999999999999999   788999999999999999999999999998865431        123


Q ss_pred             CCCCCCCCCCCC--CCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHH
Q 021659          193 MPHSSCPEDCST--QDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLA  269 (309)
Q Consensus       193 ~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~  269 (309)
                      +..|++||...+  .+.++|+||||++++++++ |+.||.+...... ........      ........    ...+.+
T Consensus       167 ~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~-~~~~~~~~------~~~~~~~~----~~~~~~  235 (261)
T cd05034         167 PIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREV-LEQVERGY------RMPRPPNC----PEELYD  235 (261)
T ss_pred             CccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHHHcCC------CCCCCCCC----CHHHHH
Confidence            357999996543  4788999999999999998 9999976543221 11111100      00111111    345667


Q ss_pred             HHHHccCCCCCCCCChHHHHHHHhh
Q 021659          270 VARLCIKTKDKPTISIPQISRYLQN  294 (309)
Q Consensus       270 l~~~cl~~dp~~Rps~~evl~~L~~  294 (309)
                      ++.+|+..+|++||++.++.+.|++
T Consensus       236 ~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         236 LMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             HHHHHcccCcccCCCHHHHHHHHhc
Confidence            7779999999999999999999885

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=2.6e-38  Score=284.84  Aligned_cols=233  Identities=17%  Similarity=0.224  Sum_probs=183.7

Q ss_pred             cccccccCCCceEEEEEEcC--CcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeC
Q 021659           42 FHRIVYTNSHGAAYKARFQD--GEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNI  114 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~--~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~  114 (309)
                      +.+.||+|+||.||+|.+..  +..||+|.+....    ...+.+.+|+++++.++||||+++++++.+ ...++||||+
T Consensus        34 ~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~  113 (340)
T PTZ00426         34 FIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFV  113 (340)
T ss_pred             EEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCC
Confidence            34689999999999998643  3689999885322    234567899999999999999999997765 6788999999


Q ss_pred             CCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc----cc
Q 021659          115 ENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----NY  190 (309)
Q Consensus       115 ~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----~~  190 (309)
                      ++|+|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....    ..
T Consensus       114 ~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~~~  188 (340)
T PTZ00426        114 IGGEFFTFLRR--NKRFPNDVGCFYAAQIVLIFEYL---QSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTYTL  188 (340)
T ss_pred             CCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCCccee
Confidence            99999999976  56799999999999999999999   78899999999999999999999999999987543    23


Q ss_pred             CCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHH
Q 021659          191 ATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL  268 (309)
Q Consensus       191 ~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~  268 (309)
                      .+|+.|+|||...  ..+.++|+|||||++|+|++|..||.................        ..+... +   ..+.
T Consensus       189 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~--------~~p~~~-~---~~~~  256 (340)
T PTZ00426        189 CGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGII--------YFPKFL-D---NNCK  256 (340)
T ss_pred             cCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCC--------CCCCCC-C---HHHH
Confidence            5788999999753  347889999999999999999999986544322111111100        111111 2   2344


Q ss_pred             HHHHHccCCCCCCCC-----ChHHHHHH
Q 021659          269 AVARLCIKTKDKPTI-----SIPQISRY  291 (309)
Q Consensus       269 ~l~~~cl~~dp~~Rp-----s~~evl~~  291 (309)
                      +++.+||+.||++|+     ++.++++.
T Consensus       257 ~li~~~l~~dp~~R~~~~~~~~~~~~~h  284 (340)
T PTZ00426        257 HLMKKLLSHDLTKRYGNLKKGAQNVKEH  284 (340)
T ss_pred             HHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence            566699999999995     78888753

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-38  Score=298.95  Aligned_cols=244  Identities=19%  Similarity=0.218  Sum_probs=197.1

Q ss_pred             cccccCCCceEEEEEEcCC-cEEEEEEec-cccccHHHHHHHHHHHccCC-CCCcceEee-eEe---C----CeeEEEEe
Q 021659           44 RIVYTNSHGAAYKARFQDG-EVALVKEIQ-ALNLEKDAFYREIQLLGRLH-HRHLLALQG-FST---G----RKRLLVFD  112 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~-~~va~K~~~-~~~~~~~~~~~ei~~l~~l~-h~niv~~~~-~~~---~----~~~~lv~e  112 (309)
                      +.|.+|+|+.||.|....+ ..||+|+.- .++..-+.+.+||+++++|+ |+|||.+++ ...   .    ...+++||
T Consensus        43 ~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmE  122 (738)
T KOG1989|consen   43 KVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLME  122 (738)
T ss_pred             EEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehh
Confidence            5799999999999997555 889999883 34444567899999999996 999999999 321   1    23468899


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc----
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----  188 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----  188 (309)
                      ||.+|+|-|+++.+....|++.++++|+.+++.|+++||. -..++||||||.+||||+.++..||||||.+....    
T Consensus       123 yC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~  201 (738)
T KOG1989|consen  123 YCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPT  201 (738)
T ss_pred             hccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCc
Confidence            9999999999987656679999999999999999999964 35669999999999999999999999999875221    


Q ss_pred             ------------ccCCCCCCCCCCC---CCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccc
Q 021659          189 ------------NYATMPHSSCPED---CST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMI  251 (309)
Q Consensus       189 ------------~~~~~~~~~~PE~---~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~  251 (309)
                                  ....|+.|.+||.   +++  -++++|||+|||+||-|+....||...-.              -.++
T Consensus       202 ~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~--------------laIl  267 (738)
T KOG1989|consen  202 SAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK--------------LAIL  267 (738)
T ss_pred             cHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc--------------eeEE
Confidence                        1257899999995   333  37999999999999999999999975421              1233


Q ss_pred             cCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcccccc
Q 021659          252 DPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCYK  302 (309)
Q Consensus       252 ~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~~~  302 (309)
                      .-...-...+.....+..||..||+.||++||++-+|+..+.++...+++-
T Consensus       268 ng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~~  318 (738)
T KOG1989|consen  268 NGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCPI  318 (738)
T ss_pred             eccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCCc
Confidence            333333333455677777777999999999999999999999888887754

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=7.2e-38  Score=281.06  Aligned_cols=184  Identities=18%  Similarity=0.256  Sum_probs=157.4

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL  119 (309)
                      +.||+|+||.||++... ++..+|+|.+....  ...+.+.+|++++++++||||+++++++. +...++||||+++++|
T Consensus        11 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L   90 (331)
T cd06649          11 SELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL   90 (331)
T ss_pred             EeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCCcH
Confidence            57999999999999974 57889999885432  22457899999999999999999999665 4778899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-----ccCCCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-----NYATMP  194 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-----~~~~~~  194 (309)
                      .+++..  ...+++..+..++.+++.||.|||+  ..+++||||||+||+++.++.++|+|||++....     ...++.
T Consensus        91 ~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~--~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~g~~  166 (331)
T cd06649          91 DQVLKE--AKRIPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR  166 (331)
T ss_pred             HHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhh--cCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccCCCCc
Confidence            999976  4678999999999999999999942  3469999999999999999999999999986432     235788


Q ss_pred             CCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCC
Q 021659          195 HSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGD  231 (309)
Q Consensus       195 ~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~  231 (309)
                      .|+|||...+  .+.++|||||||++|+|++|+.||...
T Consensus       167 ~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~  205 (331)
T cd06649         167 SYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPP  205 (331)
T ss_pred             CcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence            9999997543  478899999999999999999999643

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=5.9e-38  Score=272.99  Aligned_cols=239  Identities=16%  Similarity=0.238  Sum_probs=185.5

Q ss_pred             cccccccCCCceEEEEEEc----CCcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeC
Q 021659           42 FHRIVYTNSHGAAYKARFQ----DGEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNI  114 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~----~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~  114 (309)
                      +.+.||+|+||.||+|.+.    .+..||+|.+.....  ..+.+.+|+..+++++||||+++++++.. ...++||||+
T Consensus         9 ~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   88 (266)
T cd05064           9 IERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYM   88 (266)
T ss_pred             EeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeC
Confidence            4468999999999999853    356899999865432  23568899999999999999999997654 6788999999


Q ss_pred             CCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-----
Q 021659          115 ENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-----  189 (309)
Q Consensus       115 ~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-----  189 (309)
                      ++++|.+++... ...+++..+..++.+++.||+||   |+.+++|+||+|+||+++.++.++++|||.+.....     
T Consensus        89 ~~~~L~~~l~~~-~~~l~~~~~~~~~~~i~~al~~l---H~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~  164 (266)
T cd05064          89 SNGALDSFLRKH-EGQLVAGQLMGMLPGLASGMKYL---SEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYT  164 (266)
T ss_pred             CCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHH---HHCCEeeccccHhhEEEcCCCcEEECCCcccccccccchhc
Confidence            999999998753 35789999999999999999999   788999999999999999999999999997653211     


Q ss_pred             ---cCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHH
Q 021659          190 ---YATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKE  263 (309)
Q Consensus       190 ---~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  263 (309)
                         ..++..|+|||..  ...+.++||||||++++++++ |..||....... ...... ...     ....+.    ..
T Consensus       165 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~-~~~~~~-~~~-----~~~~~~----~~  233 (266)
T cd05064         165 TMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD-VIKAVE-DGF-----RLPAPR----NC  233 (266)
T ss_pred             ccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH-HHHHHH-CCC-----CCCCCC----CC
Confidence               1234579999964  335788999999999999775 999997543221 111111 110     011111    12


Q ss_pred             HHHHHHHHHHccCCCCCCCCChHHHHHHHhhh
Q 021659          264 LKKLLAVARLCIKTKDKPTISIPQISRYLQNE  295 (309)
Q Consensus       264 ~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~  295 (309)
                      ...+.+++.+||+.+|+.||++.++++.|.++
T Consensus       234 ~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         234 PNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             CHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence            34566677799999999999999999999865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=4.4e-38  Score=276.57  Aligned_cols=243  Identities=17%  Similarity=0.201  Sum_probs=184.2

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEecccc---ccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCC
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALN---LEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENG  117 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~---~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~  117 (309)
                      .+.||+|+||.||+++.. +++.||+|++....   ...+.+.+|++++++++||||+++++++. +...++||||++++
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   85 (287)
T cd07848           6 LGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKN   85 (287)
T ss_pred             EEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCCC
Confidence            367999999999999975 57889999985432   22456789999999999999999999665 47788999999997


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc--------c
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR--------N  189 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~--------~  189 (309)
                      ++..+...  ...+++..+..++.|++.||.||   |+.+++|+||||+||+++.++.+||+|||++....        .
T Consensus        86 ~l~~~~~~--~~~~~~~~~~~~~~qi~~~L~~l---H~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~  160 (287)
T cd07848          86 MLELLEEM--PNGVPPEKVRSYIYQLIKAIHWC---HKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTE  160 (287)
T ss_pred             HHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccc
Confidence            77766543  45689999999999999999999   78899999999999999999999999999986542        2


Q ss_pred             cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccc--------------ccccccC
Q 021659          190 YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSS--------------IHRMIDP  253 (309)
Q Consensus       190 ~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~--------------~~~~~~~  253 (309)
                      ..++..|+|||...  ..+.++|||||||++|+|++|+.||................+.              ......+
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (287)
T cd07848         161 YVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFP  240 (287)
T ss_pred             cccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccC
Confidence            35678899999643  3478899999999999999999999865433322111110000              0000011


Q ss_pred             cCCCCC------CHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          254 DLGGSY------DSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       254 ~l~~~~------~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ......      .......+.+++.+||++||++|||+.++++
T Consensus       241 ~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         241 AVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             cccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            110000      0112345777778999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=9.5e-38  Score=270.19  Aligned_cols=237  Identities=19%  Similarity=0.246  Sum_probs=187.3

Q ss_pred             cccccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           42 FHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      +.+.||+|++|.||++.+.++..+|+|.+.......+.+.+|+.++++++||||+++++++.. ...+++|||+.+++|.
T Consensus         8 ~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~   87 (256)
T cd05113           8 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLL   87 (256)
T ss_pred             EeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHH
Confidence            346899999999999998777779999887655556789999999999999999999998765 5678999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc--------cCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN--------YAT  192 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~--------~~~  192 (309)
                      +++... ...+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++.+|++|||.+.....        ..+
T Consensus        88 ~~i~~~-~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~  163 (256)
T cd05113          88 NYLREH-GKRFQPSQLLEMCKDVCEGMAYL---ESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKF  163 (256)
T ss_pred             HHHHhc-CCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCcc
Confidence            998753 23689999999999999999999   788999999999999999999999999998764321        123


Q ss_pred             CCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHH
Q 021659          193 MPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLA  269 (309)
Q Consensus       193 ~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~  269 (309)
                      +..|.+||...  ..+.++||||||+++|+|++ |..||........ .... .....     +.....    ....+.+
T Consensus       164 ~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~-~~~~-~~~~~-----~~~~~~----~~~~~~~  232 (256)
T cd05113         164 PVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSET-VEKV-SQGLR-----LYRPHL----ASEKVYA  232 (256)
T ss_pred             ChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHH-HHHH-hcCCC-----CCCCCC----CCHHHHH
Confidence            35699999753  34788999999999999998 9999875432211 1111 11110     000111    1356667


Q ss_pred             HHHHccCCCCCCCCChHHHHHHHh
Q 021659          270 VARLCIKTKDKPTISIPQISRYLQ  293 (309)
Q Consensus       270 l~~~cl~~dp~~Rps~~evl~~L~  293 (309)
                      ++.+||+.+|.+||++.++++.|+
T Consensus       233 li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         233 IMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             HHHHHcCCCcccCCCHHHHHHhhC
Confidence            777999999999999999998774

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=1e-37  Score=273.83  Aligned_cols=248  Identities=15%  Similarity=0.229  Sum_probs=185.9

Q ss_pred             ccccccCCCceEEEEEE-----cCCcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC---CeeEEEEe
Q 021659           43 HRIVYTNSHGAAYKARF-----QDGEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG---RKRLLVFD  112 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-----~~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~---~~~~lv~e  112 (309)
                      .+.||+|+||.||++.+     .++..||+|.+.....  ....+.+|++++++++||||+++++++..   ...+++||
T Consensus         9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e   88 (283)
T cd05080           9 IRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIME   88 (283)
T ss_pred             ceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEec
Confidence            36899999999988763     3577899999864332  34678899999999999999999997653   35679999


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc---
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN---  189 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~---  189 (309)
                      |+++++|.+++..   ..+++..+..++.+++.||.||   |+++++|+||||+||+++.++.++|+|||++.....   
T Consensus        89 ~~~~~~l~~~~~~---~~l~~~~~~~i~~~l~~~l~~l---H~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~  162 (283)
T cd05080          89 YVPLGSLRDYLPK---HKLNLAQLLLFAQQICEGMAYL---HSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE  162 (283)
T ss_pred             CCCCCCHHHHHHH---cCCCHHHHHHHHHHHHHHHHHH---HHCCeeccccChheEEEcCCCcEEEeecccccccCCcch
Confidence            9999999999875   4699999999999999999999   778999999999999999999999999999865432   


Q ss_pred             -------cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcc----cccccccccCcCC
Q 021659          190 -------YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSI----SSSIHRMIDPDLG  256 (309)
Q Consensus       190 -------~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~  256 (309)
                             ..++..|++||...  ..+.++||||||+++++|++|..|+...............    ........+....
T Consensus       163 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (283)
T cd05080         163 YYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMR  242 (283)
T ss_pred             hhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCC
Confidence                   12345689999653  3478999999999999999999998643221111110000    0000111111111


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhh
Q 021659          257 GSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEV  296 (309)
Q Consensus       257 ~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~  296 (309)
                      ...+......+.+++.+||+.+|++|||+.++++.|+.+.
T Consensus       243 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         243 LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence            1111112345667777999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=3.4e-38  Score=282.46  Aligned_cols=231  Identities=16%  Similarity=0.168  Sum_probs=181.1

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||++.. .+++.||+|.+....    .....+..|+++++.++||||+.+++++.. ...++||||++++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            3689999999999986 468899999985432    123466789999999999999999986654 6788999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCC-CCeeecccCCCceeeCCCCceeEeccccccccc-------c
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSN-LPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------N  189 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~-~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~  189 (309)
                      +|..++..  ...+++..+..++.|++.||.||   |+ .+++||||||+||+++.++.+||+|||++....       .
T Consensus        81 ~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~l---H~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~  155 (325)
T cd05594          81 ELFFHLSR--ERVFSEDRARFYGAEIVSALDYL---HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT  155 (325)
T ss_pred             cHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCccccc
Confidence            99998876  56799999999999999999999   64 799999999999999999999999999876321       2


Q ss_pred             cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          190 YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       190 ~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ..++..|+|||...  ..+.++|||||||++|+|++|+.||................        ..++...    ...+
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~--------~~~p~~~----~~~~  223 (325)
T cd05594         156 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE--------IRFPRTL----SPEA  223 (325)
T ss_pred             ccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCC--------CCCCCCC----CHHH
Confidence            35788999999753  35789999999999999999999997543221111111110        1111111    2345


Q ss_pred             HHHHHHccCCCCCCCC-----ChHHHHHH
Q 021659          268 LAVARLCIKTKDKPTI-----SIPQISRY  291 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rp-----s~~evl~~  291 (309)
                      .+++.+||+.||++|+     ++.++++.
T Consensus       224 ~~li~~~L~~dP~~R~~~~~~~~~~il~h  252 (325)
T cd05594         224 KSLLSGLLKKDPKQRLGGGPDDAKEIMQH  252 (325)
T ss_pred             HHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence            5666699999999997     88888743

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=6.5e-39  Score=278.11  Aligned_cols=237  Identities=26%  Similarity=0.364  Sum_probs=180.6

Q ss_pred             cccccccCCCceEEEEEEc-----CCcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEee
Q 021659           42 FHRIVYTNSHGAAYKARFQ-----DGEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~-----~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      ..+.||.|.||.||+|.+.     .+..|++|.+.....  ..+.+.+|++.+++++||||++++|++.. ...++|+||
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~   82 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY   82 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence            3468999999999999986     357799999954332  25789999999999999999999998875 567899999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-----
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-----  188 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-----  188 (309)
                      +++|+|.+++.......+++..++.++.|++.||.||   |+++++|++|+++||++++++.+||+|||++....     
T Consensus        83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~L---h~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~  159 (259)
T PF07714_consen   83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYL---HSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY  159 (259)
T ss_dssp             -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHH---HHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred             ccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccccc
Confidence            9999999999875457899999999999999999999   67789999999999999999999999999987552     


Q ss_pred             ----ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCH
Q 021659          189 ----NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDS  261 (309)
Q Consensus       189 ----~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  261 (309)
                          .......|.+||...  ..+.++||||||++++|+++ |+.||.... ........ .......     ....   
T Consensus       160 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~-~~~~~~~~-~~~~~~~-----~~~~---  229 (259)
T PF07714_consen  160 KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYD-NEEIIEKL-KQGQRLP-----IPDN---  229 (259)
T ss_dssp             EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSC-HHHHHHHH-HTTEETT-----SBTT---
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccc-cccccce-----eccc---
Confidence                123446789999743  34789999999999999999 678887652 22222222 1111111     1111   


Q ss_pred             HHHHHHHHHHHHccCCCCCCCCChHHHHHHH
Q 021659          262 KELKKLLAVARLCIKTKDKPTISIPQISRYL  292 (309)
Q Consensus       262 ~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L  292 (309)
                       ....+.+++.+||..||++|||+.++++.|
T Consensus       230 -~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  230 -CPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             -SBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             -hhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence             134566777799999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=1.9e-38  Score=268.83  Aligned_cols=240  Identities=16%  Similarity=0.192  Sum_probs=187.2

Q ss_pred             ccccCCCceEEEEEE-cCCcEEEEEEeccccccHH----HHHHHHHHHccCCCCCcceEeeeEeC---CeeEEEEeeCCC
Q 021659           45 IVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKD----AFYREIQLLGRLHHRHLLALQGFSTG---RKRLLVFDNIEN  116 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~----~~~~ei~~l~~l~h~niv~~~~~~~~---~~~~lv~e~~~~  116 (309)
                      .|++|+||.||+|+. +++++||+|+++... +.+    -..+||.+|.+.+|||||.+-.+...   +..|+|||||++
T Consensus        83 rI~EGtyGiVYRakdk~t~eIVALKr~kmek-ek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~Eh  161 (419)
T KOG0663|consen   83 RIEEGTYGVVYRAKDKKTDEIVALKRLKMEK-EKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVEH  161 (419)
T ss_pred             hcccCcceeEEEeccCCcceeEEeeeccccc-ccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHHh
Confidence            699999999999996 568999999997554 222    34799999999999999999986542   678999999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccccc------
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNY------  190 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~------  190 (309)
                       +|..++... .++|...++..++.|+++|++||   |.+.|+||||||+|+|++..|.+||+|||+|+.++..      
T Consensus       162 -DLksl~d~m-~q~F~~~evK~L~~QlL~glk~l---H~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T~  236 (419)
T KOG0663|consen  162 -DLKSLMETM-KQPFLPGEVKTLMLQLLRGLKHL---HDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPYTP  236 (419)
T ss_pred             -hHHHHHHhc-cCCCchHHHHHHHHHHHHHHHHH---hhceeEecccchhheeeccCCcEEecccchhhhhcCCcccCcc
Confidence             999999875 47899999999999999999999   8899999999999999999999999999999876654      


Q ss_pred             -CCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcC-----------
Q 021659          191 -ATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDL-----------  255 (309)
Q Consensus       191 -~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----------  255 (309)
                       .-|.=|.|||...+   ++.+.|+||+||++.||+++++.|.+...+.|.-.....-+.-.+-+.|-+           
T Consensus       237 lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f  316 (419)
T KOG0663|consen  237 LVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTF  316 (419)
T ss_pred             eEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhcccc
Confidence             34456889997544   578999999999999999999999988777665332211111111111110           


Q ss_pred             CCCCCHH---------HHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          256 GGSYDSK---------ELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       256 ~~~~~~~---------~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ....+.+         -...=.+++..+|.+||+.|.|+.|-+.
T Consensus       317 ~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~  360 (419)
T KOG0663|consen  317 SEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK  360 (419)
T ss_pred             CCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence            0000100         1123344555999999999999999874

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=6.2e-38  Score=271.59  Aligned_cols=236  Identities=15%  Similarity=0.202  Sum_probs=183.6

Q ss_pred             ccccCCCceEEEEEEc---CCcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCCCCH
Q 021659           45 IVYTNSHGAAYKARFQ---DGEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSL  119 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~---~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~~sL  119 (309)
                      .||+|+||.||+|.+.   .+..||+|.+.....  ..+.+.+|+.++++++|+||+++++++.....++||||+++++|
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~L   81 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGGPL   81 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCCH
Confidence            3899999999999863   345689998854332  24568899999999999999999998877778899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc----------
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN----------  189 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~----------  189 (309)
                      .+++... ...+++..+++++.+++.||.||   |+++++|+||||+||+++.++.+|++|||++.....          
T Consensus        82 ~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  157 (257)
T cd05115          82 NKFLSGK-KDEITVSNVVELMHQVSMGMKYL---EGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSA  157 (257)
T ss_pred             HHHHHhC-CCCCCHHHHHHHHHHHHHHHHHH---HhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCC
Confidence            9998642 35789999999999999999999   778999999999999999999999999998864321          


Q ss_pred             cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          190 YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       190 ~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                      ..++..|++||...  ..+.++||||||+++|++++ |+.||........ .... ..+..     +....    .....
T Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-~~~~-~~~~~-----~~~~~----~~~~~  226 (257)
T cd05115         158 GKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEV-MSFI-EQGKR-----LDCPA----ECPPE  226 (257)
T ss_pred             CCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHH-HHHH-HCCCC-----CCCCC----CCCHH
Confidence            12245799999643  34778999999999999996 9999975433211 1111 11110     11111    11345


Q ss_pred             HHHHHHHccCCCCCCCCChHHHHHHHhhh
Q 021659          267 LLAVARLCIKTKDKPTISIPQISRYLQNE  295 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rps~~evl~~L~~~  295 (309)
                      +.+++.+||..+|++||++.+|.+.|++.
T Consensus       227 l~~li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         227 MYALMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence            55666699999999999999999999853

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=7.1e-38  Score=279.93  Aligned_cols=230  Identities=20%  Similarity=0.231  Sum_probs=180.1

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||+|+.. +++.||+|++....    ...+.+..|.+++..+ +||||+++++++.. ...|+||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            35899999999999974 47899999985432    2234577888888876 79999999997764 678899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------c
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------N  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~  189 (309)
                      ++|..++..  ...+++..+..++.+++.||.||   |+.+++||||||+||+++.++.+||+|||++....       .
T Consensus        81 ~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~  155 (321)
T cd05591          81 GDLMFQIQR--SRKFDEPRSRFYAAEVTLALMFL---HRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTT  155 (321)
T ss_pred             CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccc
Confidence            999999876  56789999999999999999999   78899999999999999999999999999876421       2


Q ss_pred             cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          190 YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       190 ~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ..++..|+|||...  ..+.++||||||+++|+|++|+.||................        ...+ ...   ...+
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~--------~~~p-~~~---~~~~  223 (321)
T cd05591         156 FCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDD--------VLYP-VWL---SKEA  223 (321)
T ss_pred             cccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCC--------CCCC-CCC---CHHH
Confidence            34788999999653  35789999999999999999999998654322211111110        0011 111   2345


Q ss_pred             HHHHHHccCCCCCCCC-------ChHHHHH
Q 021659          268 LAVARLCIKTKDKPTI-------SIPQISR  290 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rp-------s~~evl~  290 (309)
                      .+++.+||+.||++||       ++.++++
T Consensus       224 ~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~  253 (321)
T cd05591         224 VSILKAFMTKNPNKRLGCVASQGGEDAIKQ  253 (321)
T ss_pred             HHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence            5666699999999999       7777763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=5.8e-38  Score=280.39  Aligned_cols=225  Identities=18%  Similarity=0.249  Sum_probs=177.0

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccc----cccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQAL----NLEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~----~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||+++.. +++.||+|.+...    ....+.+..|..++..+ +||||+++++++.. ...|+||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            36899999999999974 5789999998542    22345677888888877 69999999997755 678899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc-------cc
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-------RN  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-------~~  189 (309)
                      ++|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++...       ..
T Consensus        81 g~L~~~i~~--~~~l~~~~~~~~~~ql~~~L~~l---H~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~  155 (320)
T cd05590          81 GDLMFHIQK--SRRFDEARARFYAAEITSALMFL---HDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTST  155 (320)
T ss_pred             chHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccc
Confidence            999999876  46799999999999999999999   7889999999999999999999999999987642       12


Q ss_pred             cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          190 YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ..+++.|+|||....  .+.++|||||||++|+|++|+.||........ ...... ..      ...+ ...   ...+
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~-~~~i~~-~~------~~~~-~~~---~~~~  223 (320)
T cd05590         156 FCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDL-FEAILN-DE------VVYP-TWL---SQDA  223 (320)
T ss_pred             cccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH-HHHHhc-CC------CCCC-CCC---CHHH
Confidence            357889999997543  47889999999999999999999976543221 111111 10      0111 111   2344


Q ss_pred             HHHHHHccCCCCCCCCCh
Q 021659          268 LAVARLCIKTKDKPTISI  285 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~  285 (309)
                      .+++.+||+.||++||++
T Consensus       224 ~~li~~~L~~dP~~R~~~  241 (320)
T cd05590         224 VDILKAFMTKNPTMRLGS  241 (320)
T ss_pred             HHHHHHHcccCHHHCCCC
Confidence            566669999999999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=6.9e-38  Score=274.67  Aligned_cols=238  Identities=21%  Similarity=0.305  Sum_probs=184.6

Q ss_pred             ccccccCCCceEEEEEEcC------CcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEee
Q 021659           43 HRIVYTNSHGAAYKARFQD------GEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~------~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      .+.||+|++|.||+|....      ...|++|.+.....  ..+.+.+|+.++.+++||||+++++++.+ ...++++||
T Consensus        10 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~   89 (283)
T cd05048          10 LEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEY   89 (283)
T ss_pred             hhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEEec
Confidence            3689999999999998632      25789998853322  23568899999999999999999998765 667899999


Q ss_pred             CCCCCHHHhhcCCC--------------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEe
Q 021659          114 IENGSLKEHLNDPL--------------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLS  179 (309)
Q Consensus       114 ~~~~sL~~~i~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~  179 (309)
                      +++++|.+++....              ...+++..+..++.+++.||.||   |+.+++|+||||+||+++.++.++|+
T Consensus        90 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~l---H~~~i~H~dlkp~Nil~~~~~~~~L~  166 (283)
T cd05048          90 LAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYL---SSHHFVHRDLAARNCLVGEGLTVKIS  166 (283)
T ss_pred             CCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccccccceEEEcCCCcEEEC
Confidence            99999999986421              15688899999999999999999   78899999999999999999999999


Q ss_pred             ccccccccc---------ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccc
Q 021659          180 DVGFFNSVR---------NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSI  247 (309)
Q Consensus       180 dfg~~~~~~---------~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~  247 (309)
                      |||++....         ...++..|+|||...  ..+.++||||||+++|||++ |..||.+.... ..... ......
T Consensus       167 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~-~~~~~-i~~~~~  244 (283)
T cd05048         167 DFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ-EVIEM-IRSRQL  244 (283)
T ss_pred             CCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHH-HHcCCc
Confidence            999986432         123456799999643  34788999999999999998 99998754321 11111 111111


Q ss_pred             cccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhh
Q 021659          248 HRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQN  294 (309)
Q Consensus       248 ~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~  294 (309)
                           +..    .......+.+++.+||..||++||++.+|++.|++
T Consensus       245 -----~~~----~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         245 -----LPC----PEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             -----CCC----cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence                 111    11223556677779999999999999999999985

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=1e-37  Score=274.67  Aligned_cols=242  Identities=16%  Similarity=0.170  Sum_probs=181.6

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      +.||+|+||.||+|... ++..||+|.+....  .....+.+|+.++++++||||+++++++.. ...++||||+++ +|
T Consensus        11 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~-~l   89 (288)
T cd07871          11 DKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLDS-DL   89 (288)
T ss_pred             eEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCCc-CH
Confidence            68999999999999964 57899999885332  224567899999999999999999997754 567899999986 99


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYAT  192 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~~  192 (309)
                      .+++... ...+++..+..++.|++.||+||   |+.+++||||||+||+++.++.+||+|||++....       ...+
T Consensus        90 ~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~~~  165 (288)
T cd07871          90 KQYLDNC-GNLMSMHNVKIFMFQLLRGLSYC---HKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVV  165 (288)
T ss_pred             HHHHHhc-CCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccCcee
Confidence            9888642 34578899999999999999999   78899999999999999999999999999986432       2356


Q ss_pred             CCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHh-----cccccccc---------cccCcC
Q 021659          193 MPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQES-----SISSSIHR---------MIDPDL  255 (309)
Q Consensus       193 ~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~-----~~~~~~~~---------~~~~~l  255 (309)
                      ++.|+|||...+   .+.++|||||||++|+|++|+.||.+...........     ......+.         ..-+..
T Consensus       166 ~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (288)
T cd07871         166 TLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQY  245 (288)
T ss_pred             cccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCcc
Confidence            788999996532   4778999999999999999999997654322111100     00000011         111111


Q ss_pred             CCCCC----HHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          256 GGSYD----SKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       256 ~~~~~----~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .....    .....+..+++.+||+.||.+|||+.|+++
T Consensus       246 ~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         246 RAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             CCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            00000    011234567777999999999999999975

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=2.2e-37  Score=283.10  Aligned_cols=234  Identities=14%  Similarity=0.122  Sum_probs=179.7

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||+|+. .+++.||+|++....    ...+.+.+|++++++++||||+++++++.+ ...++||||+++|
T Consensus         7 ~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg   86 (381)
T cd05626           7 KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGG   86 (381)
T ss_pred             EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCCC
Confidence            6799999999999986 457899999985432    123468899999999999999999997765 6788999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc----------
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV----------  187 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~----------  187 (309)
                      +|.+++..  ...+++..+..++.|++.||.||   |+.+|+||||||+||+++.++.+||+|||++...          
T Consensus        87 ~L~~~l~~--~~~~~e~~~~~~~~qi~~aL~~L---H~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~  161 (381)
T cd05626          87 DMMSLLIR--MEVFPEVLARFYIAELTLAIESV---HKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQ  161 (381)
T ss_pred             cHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccccc
Confidence            99999976  56789999999999999999999   7889999999999999999999999999986422          


Q ss_pred             --------------------------------------------cccCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHH
Q 021659          188 --------------------------------------------RNYATMPHSSCPEDC--STQDCSNIIFQLGVLILEL  221 (309)
Q Consensus       188 --------------------------------------------~~~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l  221 (309)
                                                                  ....+|..|+|||..  ...+.++|||||||++|||
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~el  241 (381)
T cd05626         162 KGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEM  241 (381)
T ss_pred             ccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHH
Confidence                                                        113578899999964  3357899999999999999


Q ss_pred             HhCCCCCCCCccHHHHHHHhcccccccccccCcCCC-CCCHHHHHHHHHHHHH--ccCCCCCCCCChHHHHHH
Q 021659          222 VTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGG-SYDSKELKKLLAVARL--CIKTKDKPTISIPQISRY  291 (309)
Q Consensus       222 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~l~~l~~~--cl~~dp~~Rps~~evl~~  291 (309)
                      ++|+.||..................      ...+. ...+.+..   +++.+  |+..+|..||++.++++.
T Consensus       242 ltG~~Pf~~~~~~~~~~~i~~~~~~------~~~~~~~~~s~~~~---dli~~ll~~~~~~~~R~~~~~~l~h  305 (381)
T cd05626         242 LVGQPPFLAPTPTETQLKVINWENT------LHIPPQVKLSPEAV---DLITKLCCSAEERLGRNGADDIKAH  305 (381)
T ss_pred             HhCCCCCcCCCHHHHHHHHHccccc------cCCCCCCCCCHHHH---HHHHHHccCcccccCCCCHHHHhcC
Confidence            9999999765432222211110000      01111 01122333   44446  556666779999999853

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=2.7e-37  Score=267.80  Aligned_cols=240  Identities=15%  Similarity=0.265  Sum_probs=190.5

Q ss_pred             ccccccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCCCCHH
Q 021659           41 GFHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLK  120 (309)
Q Consensus        41 ~~~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~~sL~  120 (309)
                      .+.+.||+|+||.||++...++..+++|.+.......+.+.+|++++++++|+||+++.+++.....+++|||+++++|.
T Consensus         9 ~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e~~~~~~L~   88 (260)
T cd05073           9 KLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLL   88 (260)
T ss_pred             eEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEEeCCCCcHH
Confidence            34578999999999999987777899998875555567789999999999999999999987767788999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc--------cCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN--------YAT  192 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~--------~~~  192 (309)
                      +++.......+++..+..++.+++.||.+|   |+.+++|+||+|+||+++.++.++++|||.+.....        ..+
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~l~~aL~~l---H~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~  165 (260)
T cd05073          89 DFLKSDEGSKQPLPKLIDFSAQIAEGMAFI---EQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF  165 (260)
T ss_pred             HHHHhCCccccCHHHHHHHHHHHHHHHHHH---HhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCCcc
Confidence            999764456688899999999999999999   778999999999999999999999999998764432        122


Q ss_pred             CCCCCCCCCCCC--CCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHH
Q 021659          193 MPHSSCPEDCST--QDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLA  269 (309)
Q Consensus       193 ~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~  269 (309)
                      +..|.+||....  .+.++|+||||++++++++ |+.||........ .........      .....    .....+.+
T Consensus       166 ~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~-~~~~~~~~~------~~~~~----~~~~~~~~  234 (260)
T cd05073         166 PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV-IRALERGYR------MPRPE----NCPEELYN  234 (260)
T ss_pred             cccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHH-HHHHhCCCC------CCCcc----cCCHHHHH
Confidence            356999997533  4778999999999999999 8999976432211 111111000      00111    12345667


Q ss_pred             HHHHccCCCCCCCCChHHHHHHHhh
Q 021659          270 VARLCIKTKDKPTISIPQISRYLQN  294 (309)
Q Consensus       270 l~~~cl~~dp~~Rps~~evl~~L~~  294 (309)
                      ++.+|++++|++||++.++...|++
T Consensus       235 ~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         235 IMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             HHHHHcccCcccCcCHHHHHHHHhc
Confidence            7779999999999999999999985

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-38  Score=285.14  Aligned_cols=238  Identities=20%  Similarity=0.295  Sum_probs=189.2

Q ss_pred             ccCHHHHHHhhcccccccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeE
Q 021659           29 RFSYKDIKMATDGFHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRL  108 (309)
Q Consensus        29 ~~~~~~i~~~~~~~~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~  108 (309)
                      ++.+++|....     -||.|+.|.||+|+.. ++.||+|++....      ..+|+=|++|+|+|||.+.|+|+....|
T Consensus       120 eiPFe~IsELe-----WlGSGaQGAVF~Grl~-netVAVKKV~elk------ETdIKHLRkLkH~NII~FkGVCtqsPcy  187 (904)
T KOG4721|consen  120 EIPFEEISELE-----WLGSGAQGAVFLGRLH-NETVAVKKVRELK------ETDIKHLRKLKHPNIITFKGVCTQSPCY  187 (904)
T ss_pred             cCCHHHhhhhh-----hhccCcccceeeeecc-CceehhHHHhhhh------hhhHHHHHhccCcceeeEeeeecCCcee
Confidence            45555555433     3999999999999984 6788999874222      2467889999999999999999986555


Q ss_pred             -EEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc
Q 021659          109 -LVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV  187 (309)
Q Consensus       109 -lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~  187 (309)
                       +|||||..|.|...++.  +.+++......+.++|+.|+.||   |.+.|||||||.-||||+.+..|||+|||.++..
T Consensus       188 CIiMEfCa~GqL~~VLka--~~~itp~llv~Wsk~IA~GM~YL---H~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~  262 (904)
T KOG4721|consen  188 CIIMEFCAQGQLYEVLKA--GRPITPSLLVDWSKGIAGGMNYL---HLHKIIHRDLKSPNILISYDDVVKISDFGTSKEL  262 (904)
T ss_pred             EEeeeccccccHHHHHhc--cCccCHHHHHHHHHHhhhhhHHH---HHhhHhhhccCCCceEeeccceEEeccccchHhh
Confidence             99999999999999998  78899999999999999999999   7788999999999999999999999999988644


Q ss_pred             c------ccCCCCCCCCCCCCCCC--CCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCC
Q 021659          188 R------NYATMPHSSCPEDCSTQ--DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSY  259 (309)
Q Consensus       188 ~------~~~~~~~~~~PE~~~~~--~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  259 (309)
                      .      .+.||..|+|||..+..  +++.||||||++||||+||..||.+-...      +...+.    =...+.-.+
T Consensus       263 ~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss------AIIwGV----GsNsL~Lpv  332 (904)
T KOG4721|consen  263 SDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS------AIIWGV----GSNSLHLPV  332 (904)
T ss_pred             hhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh------eeEEec----cCCcccccC
Confidence            3      35789999999976543  78999999999999999999999853221      111111    011222222


Q ss_pred             CHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHh
Q 021659          260 DSKELKKLLAVARLCIKTKDKPTISIPQISRYLQ  293 (309)
Q Consensus       260 ~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~  293 (309)
                      ++.+...+.-|+.+||+-.|..||+..+++..|+
T Consensus       333 PstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hld  366 (904)
T KOG4721|consen  333 PSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLD  366 (904)
T ss_pred             cccCchHHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence            3333445555666999999999999999998886

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=5.7e-38  Score=279.89  Aligned_cols=241  Identities=14%  Similarity=0.204  Sum_probs=187.0

Q ss_pred             cccccCCCceEEEEEEc-CCc----EEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGE----VALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~----~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||+|.+. ++.    .||+|.+....  ...+++.+|+.+++.++||||++++|++.....+++++|+++
T Consensus        13 ~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~v~e~~~~   92 (316)
T cd05108          13 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPF   92 (316)
T ss_pred             eeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCceeeeecCCC
Confidence            57999999999999863 333    38999885432  234678899999999999999999999887778899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccccc------
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNY------  190 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~------  190 (309)
                      |+|.+++... ...+++..+..++.|++.||+||   |+.+++||||||+||+++.++.+||+|||++......      
T Consensus        93 g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~L---H~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~  168 (316)
T cd05108          93 GCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYL---EERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHA  168 (316)
T ss_pred             CCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHH---HhcCeeccccchhheEecCCCcEEEccccccccccCCCcceec
Confidence            9999998753 34688899999999999999999   7889999999999999999999999999998754321      


Q ss_pred             ---CCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHH
Q 021659          191 ---ATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKEL  264 (309)
Q Consensus       191 ---~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  264 (309)
                         ..+..|++||...  ..+.++||||||+++|+|++ |..||.+.... +..........   .  + .....    .
T Consensus       169 ~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~-~~~~~~~~~~~---~--~-~~~~~----~  237 (316)
T cd05108         169 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-EISSILEKGER---L--P-QPPIC----T  237 (316)
T ss_pred             cCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHhCCCC---C--C-CCCCC----C
Confidence               1235699999653  34788999999999999997 99999754321 11111111100   0  0 01111    2


Q ss_pred             HHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccc
Q 021659          265 KKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQ  299 (309)
Q Consensus       265 ~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~  299 (309)
                      ..+.+++.+||..+|+.||++.+++..|.....-.
T Consensus       238 ~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~  272 (316)
T cd05108         238 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP  272 (316)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence            35667777999999999999999999988766543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=3.2e-38  Score=287.78  Aligned_cols=241  Identities=19%  Similarity=0.303  Sum_probs=184.0

Q ss_pred             ccccccCCCceEEEEEEc------CCcEEEEEEeccccc--cHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEe
Q 021659           43 HRIVYTNSHGAAYKARFQ------DGEVALVKEIQALNL--EKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFD  112 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~------~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e  112 (309)
                      .+.||+|+||.||++...      ++..||+|.+.....  ..+.+.+|+++++.+ +|+||+++++.+.. ...++|||
T Consensus        43 ~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~e  122 (374)
T cd05106          43 GKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITE  122 (374)
T ss_pred             hheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeHh
Confidence            468999999999998842      235799999854322  235688999999999 89999999997765 67789999


Q ss_pred             eCCCCCHHHhhcCC------------------------------------------------------------------
Q 021659          113 NIENGSLKEHLNDP------------------------------------------------------------------  126 (309)
Q Consensus       113 ~~~~~sL~~~i~~~------------------------------------------------------------------  126 (309)
                      |+++|+|.+++...                                                                  
T Consensus       123 y~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (374)
T cd05106         123 YCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEED  202 (374)
T ss_pred             hccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccccchhc
Confidence            99999999987431                                                                  


Q ss_pred             --CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc---------cCCCCC
Q 021659          127 --LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN---------YATMPH  195 (309)
Q Consensus       127 --~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~---------~~~~~~  195 (309)
                        ....+++..+..++.|++.||.||   |+++++||||||+||+++.++.+||+|||++.....         ..++..
T Consensus       203 ~~~~~~l~~~~~~~i~~qi~~aL~yL---H~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~  279 (374)
T cd05106         203 TEDSWPLDLDDLLRFSSQVAQGMDFL---ASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVK  279 (374)
T ss_pred             cCCCCCcCHHHHHHHHHHHHHHHHHH---HHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccc
Confidence              012478889999999999999999   788999999999999999999999999999864321         123456


Q ss_pred             CCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHH
Q 021659          196 SSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVAR  272 (309)
Q Consensus       196 ~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~  272 (309)
                      |+|||..  ...+.++||||||+++|+|++ |+.||.............. ...     .+..+ ...   ...+.+++.
T Consensus       280 y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~-~~~-----~~~~~-~~~---~~~l~~li~  349 (374)
T cd05106         280 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVK-RGY-----QMSRP-DFA---PPEIYSIMK  349 (374)
T ss_pred             eeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHH-ccc-----CccCC-CCC---CHHHHHHHH
Confidence            9999964  335789999999999999997 9999976432221111111 110     01111 111   245666777


Q ss_pred             HccCCCCCCCCChHHHHHHHhhhh
Q 021659          273 LCIKTKDKPTISIPQISRYLQNEV  296 (309)
Q Consensus       273 ~cl~~dp~~Rps~~evl~~L~~~~  296 (309)
                      +||+.||++|||+.++++.|++++
T Consensus       350 ~cl~~dp~~RPs~~~l~~~l~~~~  373 (374)
T cd05106         350 MCWNLEPTERPTFSQISQLIQRQL  373 (374)
T ss_pred             HHcCCChhhCcCHHHHHHHHHHHh
Confidence            999999999999999999999765

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=7.1e-38  Score=281.49  Aligned_cols=242  Identities=17%  Similarity=0.222  Sum_probs=181.2

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEeccc---cccHHHHHHHHHHHccCCCCCcceEeeeEeC------CeeEEEEe
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQAL---NLEKDAFYREIQLLGRLHHRHLLALQGFSTG------RKRLLVFD  112 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~---~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~------~~~~lv~e  112 (309)
                      .+.||+|+||.||+|.. .++..||+|.+...   ......+.+|++++++++||||+++++++..      ...|+|||
T Consensus         5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e   84 (338)
T cd07859           5 QEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFE   84 (338)
T ss_pred             EEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEe
Confidence            46899999999999996 46889999988532   2233468899999999999999999997642      24689999


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc----
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----  188 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----  188 (309)
                      |+. ++|.+++..  ...+++..+..++.|+++||.||   |+.+++||||||+||+++.++.+||+|||++....    
T Consensus        85 ~~~-~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~  158 (338)
T cd07859          85 LME-SDLHQVIKA--NDDLTPEHHQFFLYQLLRALKYI---HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP  158 (338)
T ss_pred             cCC-CCHHHHHHh--cccCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEECCCCcEEEccCccccccccccC
Confidence            996 599998876  46799999999999999999999   78899999999999999999999999999986431    


Q ss_pred             ------ccCCCCCCCCCCCCC----CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHH--Hhcc-----------cc
Q 021659          189 ------NYATMPHSSCPEDCS----TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQ--ESSI-----------SS  245 (309)
Q Consensus       189 ------~~~~~~~~~~PE~~~----~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~--~~~~-----------~~  245 (309)
                            ...+++.|+|||...    ..+.++|||||||++|+|++|+.||.+.........  ....           ..
T Consensus       159 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  238 (338)
T cd07859         159 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNE  238 (338)
T ss_pred             ccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhh
Confidence                  235788899999643    347889999999999999999999976543221110  0000           00


Q ss_pred             ccccc---ccCcCCCCC---CHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          246 SIHRM---IDPDLGGSY---DSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       246 ~~~~~---~~~~l~~~~---~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .....   ..+......   .......+.+++.+||..||++|||+.|+++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~  289 (338)
T cd07859         239 KARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA  289 (338)
T ss_pred             hHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence            00000   000000000   0011234567777999999999999999994

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.1e-37  Score=269.69  Aligned_cols=236  Identities=17%  Similarity=0.225  Sum_probs=186.0

Q ss_pred             cccccCCCceEEEEEEcC----CcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQD----GEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~----~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||+|.+..    +..+++|.+.....  ..+.+.+|+++++++.|+|++++++++.....++||||++++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~   80 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLG   80 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCCCC
Confidence            368999999999998622    26899999865443  345789999999999999999999988777789999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccccc-------
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNY-------  190 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~-------  190 (309)
                      +|.+++..  ...+++..+..++.|++.||.+|   |..+++|+||+|+||+++.++.++|+|||++......       
T Consensus        81 ~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~l---h~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~  155 (257)
T cd05060          81 PLLKYLKK--RREIPVSDLKELAHQVAMGMAYL---ESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRAT  155 (257)
T ss_pred             cHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHH---hhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccc
Confidence            99999976  45789999999999999999999   7789999999999999999999999999988644211       


Q ss_pred             ---CCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHH
Q 021659          191 ---ATMPHSSCPEDCST--QDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKEL  264 (309)
Q Consensus       191 ---~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  264 (309)
                         .++..|++||....  .+.++||||||++++++++ |..||...... +..........      ......    ..
T Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~-~~~~~~~~~~~------~~~~~~----~~  224 (257)
T cd05060         156 TAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA-EVIAMLESGER------LPRPEE----CP  224 (257)
T ss_pred             cCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH-HHHHHHHcCCc------CCCCCC----CC
Confidence               11346999996533  4788999999999999998 99999754332 11111111110      001111    12


Q ss_pred             HHHHHHHHHccCCCCCCCCChHHHHHHHhhh
Q 021659          265 KKLLAVARLCIKTKDKPTISIPQISRYLQNE  295 (309)
Q Consensus       265 ~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~  295 (309)
                      ..+.+++.+||..+|++||++.++++.|++.
T Consensus       225 ~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~  255 (257)
T cd05060         225 QEIYSIMLSCWKYRPEDRPTFSELESTFRRD  255 (257)
T ss_pred             HHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence            4566777799999999999999999999864

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.6e-38  Score=269.52  Aligned_cols=253  Identities=17%  Similarity=0.232  Sum_probs=194.7

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecc---ccccHHHHHHHHHHHccCCCCCcceEeeeEeC------CeeEEEEee
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQA---LNLEKDAFYREIQLLGRLHHRHLLALQGFSTG------RKRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~---~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~------~~~~lv~e~  113 (309)
                      +.||.|+||.|+.+.. .+|+.||+|++.+   .....++..+|+.+|+.++|+||+.+.+....      ...|+|+|+
T Consensus        28 ~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~el  107 (359)
T KOG0660|consen   28 EPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFEL  107 (359)
T ss_pred             ccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhH
Confidence            5699999999999996 5689999999953   33445778899999999999999999996542      467999999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-----
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-----  188 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-----  188 (309)
                      |+. +|.+.++.  ++.++...+..++.|++.||.|+   |+.+++||||||+|++++.++.+||+|||+|+...     
T Consensus       108 Met-DL~~iik~--~~~L~d~H~q~f~YQiLrgLKyi---HSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~  181 (359)
T KOG0660|consen  108 MET-DLHQIIKS--QQDLTDDHAQYFLYQILRGLKYI---HSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFED  181 (359)
T ss_pred             Hhh-HHHHHHHc--CccccHHHHHHHHHHHHHhcchh---hcccccccccchhheeeccCCCEEeccccceeeccccCcc
Confidence            966 99999987  56799999999999999999999   88899999999999999999999999999998763     


Q ss_pred             ----ccCCCCCCCCCCCC---CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccc-------------ccc
Q 021659          189 ----NYATMPHSSCPEDC---STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISS-------------SIH  248 (309)
Q Consensus       189 ----~~~~~~~~~~PE~~---~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~-------------~~~  248 (309)
                          .++.|.-|.|||..   ..++.+.||||.||++.||++|++.|.+...+.|.-......+             ...
T Consensus       182 ~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar  261 (359)
T KOG0660|consen  182 GFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKAR  261 (359)
T ss_pred             cchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHH
Confidence                34556678899964   4458899999999999999999999988766654422111100             011


Q ss_pred             ccccC--cCC-CCCC---HHHHHHHHHHHHHccCCCCCCCCChHHHH--HHHhhhhcccccc
Q 021659          249 RMIDP--DLG-GSYD---SKELKKLLAVARLCIKTKDKPTISIPQIS--RYLQNEVDIQCYK  302 (309)
Q Consensus       249 ~~~~~--~l~-~~~~---~~~~~~l~~l~~~cl~~dp~~Rps~~evl--~~L~~~~~~~~~~  302 (309)
                      ..+..  ..+ ..+.   +......++++.+||..||..|+|++|.+  ..|...-+.+..|
T Consensus       262 ~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP  323 (359)
T KOG0660|consen  262 PYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEP  323 (359)
T ss_pred             HHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCC
Confidence            11111  001 1100   11123344555599999999999999988  4566666666666

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.4e-38  Score=284.28  Aligned_cols=244  Identities=20%  Similarity=0.263  Sum_probs=191.3

Q ss_pred             cccccCCCceEEEEEEcC--C--cE-EEEEEecc-c---cccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEee
Q 021659           44 RIVYTNSHGAAYKARFQD--G--EV-ALVKEIQA-L---NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~--~--~~-va~K~~~~-~---~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      ++||+|+||.||+|++..  +  .. ||+|.... .   .....++++|++++++++||||+++||++.. ...++|||+
T Consensus       163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl  242 (474)
T KOG0194|consen  163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMEL  242 (474)
T ss_pred             ceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEe
Confidence            689999999999999632  2  23 89998864 2   2234679999999999999999999998876 567799999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccccc---
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNY---  190 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~---  190 (309)
                      |.||+|.++++... ..++..+...++.+.+.||+||   |+++++||||-.+|.|++.++.+||+|||+++....+   
T Consensus       243 ~~gGsL~~~L~k~~-~~v~~~ek~~~~~~AA~Gl~YL---h~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~  318 (474)
T KOG0194|consen  243 CNGGSLDDYLKKNK-KSLPTLEKLRFCYDAARGLEYL---HSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMK  318 (474)
T ss_pred             cCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHhHHHHH---HHCCCcchhHhHHHheecCCCeEEeCccccccCCcceeec
Confidence            99999999998732 3699999999999999999999   8999999999999999999999999999998755422   


Q ss_pred             ----CCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHH
Q 021659          191 ----ATMPHSSCPEDCST--QDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKE  263 (309)
Q Consensus       191 ----~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  263 (309)
                          .-...|+|||....  +++++||||||+++||+.+ |..||.+...............       +.......+.+
T Consensus       319 ~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~-------r~~~~~~~p~~  391 (474)
T KOG0194|consen  319 KFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGY-------RMPIPSKTPKE  391 (474)
T ss_pred             cccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCc-------cCCCCCCCHHH
Confidence                22357999996544  5889999999999999998 8899987654432222111100       01111133444


Q ss_pred             HHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccccc
Q 021659          264 LKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCY  301 (309)
Q Consensus       264 ~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~~  301 (309)
                      ...   ++.+||..+|++||++.++.+.|+........
T Consensus       392 ~~~---~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~  426 (474)
T KOG0194|consen  392 LAK---VMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA  426 (474)
T ss_pred             HHH---HHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence            444   44499999999999999999999877665543

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=2.2e-37  Score=270.88  Aligned_cols=238  Identities=21%  Similarity=0.316  Sum_probs=185.0

Q ss_pred             cccccccCCCceEEEEEEc------CCcEEEEEEecccccc--HHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEe
Q 021659           42 FHRIVYTNSHGAAYKARFQ------DGEVALVKEIQALNLE--KDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFD  112 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~------~~~~va~K~~~~~~~~--~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e  112 (309)
                      +.+.||+|+||.||+|...      ++..||+|.+......  .+.+.+|++++++++|+||+++++++.. ...++|||
T Consensus         9 ~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   88 (280)
T cd05049           9 LKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFE   88 (280)
T ss_pred             HHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEe
Confidence            3468999999999999863      2478999998644332  4678999999999999999999997754 67889999


Q ss_pred             eCCCCCHHHhhcCCC------------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEec
Q 021659          113 NIENGSLKEHLNDPL------------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSD  180 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~------------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~d  180 (309)
                      |+++++|.+++....            ...+++..+..++.+++.|+.+|   |+++++|+||+|+||+++.++.++|+|
T Consensus        89 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~l---H~~~i~h~dlkp~nili~~~~~~kl~d  165 (280)
T cd05049          89 YMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYL---ASQHFVHRDLATRNCLVGYDLVVKIGD  165 (280)
T ss_pred             cCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHH---hhCCeeccccccceEEEcCCCeEEECC
Confidence            999999999986421            24578899999999999999999   788999999999999999999999999


Q ss_pred             cccccccc---------ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhccccccc
Q 021659          181 VGFFNSVR---------NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIH  248 (309)
Q Consensus       181 fg~~~~~~---------~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~  248 (309)
                      ||++....         ...++..|+|||...  ..+.++||||||+++++|++ |..||...... ....... .+.. 
T Consensus       166 ~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~-~~~~~~~-~~~~-  242 (280)
T cd05049         166 FGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE-EVIECIT-QGRL-  242 (280)
T ss_pred             cccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH-HHHHHHH-cCCc-
Confidence            99886431         112346799999643  34788999999999999998 99998654321 1111111 1111 


Q ss_pred             ccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHh
Q 021659          249 RMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQ  293 (309)
Q Consensus       249 ~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~  293 (309)
                          +.....    ....+.+++.+||..||+.||++.|+++.|+
T Consensus       243 ----~~~~~~----~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         243 ----LQRPRT----CPSEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             ----CCCCCC----CCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence                011111    1345566777999999999999999999986

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.9e-37  Score=268.18  Aligned_cols=236  Identities=19%  Similarity=0.255  Sum_probs=186.5

Q ss_pred             cccccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           42 FHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      +.+.||+|++|.||++.+.++..+|+|.+.........+.+|++++++++||||+++++++.. ...++|+||+++++|.
T Consensus         8 ~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   87 (256)
T cd05059           8 FLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLL   87 (256)
T ss_pred             hhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHH
Confidence            446899999999999998777789999986555556778899999999999999999997765 6678999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccccc--------CC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNY--------AT  192 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~--------~~  192 (309)
                      +++... ...+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++.+|++|||++......        ..
T Consensus        88 ~~l~~~-~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  163 (256)
T cd05059          88 NYLRER-KGKLGTEWLLDMCSDVCEAMEYL---ESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKF  163 (256)
T ss_pred             HHHHhc-ccCCCHHHHHHHHHHHHHHHHHH---HHCCcccccccHhhEEECCCCcEEECCcccceecccccccccCCCCC
Confidence            998653 24689999999999999999999   7889999999999999999999999999988644221        12


Q ss_pred             CCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHH
Q 021659          193 MPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLA  269 (309)
Q Consensus       193 ~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~  269 (309)
                      +..|.+||...  ..+.++|+||||+++|++++ |..||........ .......      ........    ....+.+
T Consensus       164 ~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-~~~~~~~------~~~~~~~~----~~~~~~~  232 (256)
T cd05059         164 PVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEV-VESVSAG------YRLYRPKL----APTEVYT  232 (256)
T ss_pred             CccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHH-HHHHHcC------CcCCCCCC----CCHHHHH
Confidence            24699999643  34778999999999999999 8899875433211 1111110      01111111    1345667


Q ss_pred             HHHHccCCCCCCCCChHHHHHHH
Q 021659          270 VARLCIKTKDKPTISIPQISRYL  292 (309)
Q Consensus       270 l~~~cl~~dp~~Rps~~evl~~L  292 (309)
                      ++.+||..+|++|||+.|+++.|
T Consensus       233 li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         233 IMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             HHHHHhcCChhhCcCHHHHHHHh
Confidence            77799999999999999999886

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-37  Score=282.30  Aligned_cols=232  Identities=14%  Similarity=0.161  Sum_probs=180.6

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||+++.. +++.||+|++....    .....+.+|+++++.++||||+++++++.+ ...++||||+++|
T Consensus         7 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g   86 (364)
T cd05599           7 KVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGG   86 (364)
T ss_pred             EEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCCc
Confidence            68999999999999974 58899999996432    223457889999999999999999997654 6788999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---------
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---------  188 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---------  188 (309)
                      +|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.++|+|||++....         
T Consensus        87 ~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~l---H~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  161 (364)
T cd05599          87 DMMTLLMK--KDTFTEEETRFYIAETILAIDSI---HKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYR  161 (364)
T ss_pred             HHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEeccCCHHHeEECCCCCEEEeecccceeccccccccccc
Confidence            99999876  46799999999999999999999   78899999999999999999999999999875321         


Q ss_pred             ------------------------------------ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCC
Q 021659          189 ------------------------------------NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEG  230 (309)
Q Consensus       189 ------------------------------------~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~  230 (309)
                                                          ...||+.|+|||...  ..+.++|||||||++|+|++|..||..
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~  241 (364)
T cd05599         162 ILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCS  241 (364)
T ss_pred             cccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCC
Confidence                                                124788999999643  347899999999999999999999986


Q ss_pred             CccHHHHHHHhcccccccccccCcCCCC-CCHHHHHHHHHHHHHccCCCCCCCCC---hHHHHH
Q 021659          231 DVDLIQWIQESSISSSIHRMIDPDLGGS-YDSKELKKLLAVARLCIKTKDKPTIS---IPQISR  290 (309)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~l~~l~~~cl~~dp~~Rps---~~evl~  290 (309)
                      ........... ....  ..   ..+.. ..+   ..+.+++.+|+. +|.+|++   +.|++.
T Consensus       242 ~~~~~~~~~i~-~~~~--~~---~~~~~~~~s---~~~~~li~~ll~-~p~~R~~~~~~~~ll~  295 (364)
T cd05599         242 DNPQETYRKII-NWKE--TL---QFPDEVPLS---PEAKDLIKRLCC-EAERRLGNNGVNEIKS  295 (364)
T ss_pred             CCHHHHHHHHH-cCCC--cc---CCCCCCCCC---HHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence            54322211111 1000  00   01111 112   334455558886 8999998   888875

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-37  Score=281.47  Aligned_cols=235  Identities=16%  Similarity=0.169  Sum_probs=185.0

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      .+.||+|+||.||+|... +++.||+|++....    .....+..|++++..++|+||+++++++.+ ...++||||+++
T Consensus         6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   85 (350)
T cd05573           6 IKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPG   85 (350)
T ss_pred             EEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCC
Confidence            368999999999999974 68899999985432    234568899999999999999999996654 678899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------  189 (309)
                      ++|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++.....       
T Consensus        86 ~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~L---H~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~  160 (350)
T cd05573          86 GDLMNLLIR--KDVFPEETARFYIAELVLALDSV---HKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYY  160 (350)
T ss_pred             CCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccc
Confidence            999999976  46799999999999999999999   778999999999999999999999999999864332       


Q ss_pred             -----------------------------cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHH
Q 021659          190 -----------------------------YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWI  238 (309)
Q Consensus       190 -----------------------------~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~  238 (309)
                                                   ..+++.|+|||....  .+.++|||||||++|+|++|+.||..........
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~  240 (350)
T cd05573         161 LNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYN  240 (350)
T ss_pred             ccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHH
Confidence                                         247889999996443  4789999999999999999999998665332222


Q ss_pred             HHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCC-hHHHHHH
Q 021659          239 QESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTIS-IPQISRY  291 (309)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps-~~evl~~  291 (309)
                      ........   ..-|.. ..    ....+.+++.+|+. ||++||+ +.++++.
T Consensus       241 ~i~~~~~~---~~~p~~-~~----~~~~~~~li~~ll~-dp~~R~~s~~~ll~h  285 (350)
T cd05573         241 KIINWKES---LRFPPD-PP----VSPEAIDLICRLLC-DPEDRLGSFEEIKSH  285 (350)
T ss_pred             HHhccCCc---ccCCCC-CC----CCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence            11110000   000110 00    13445566669997 9999999 9999864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=4.2e-37  Score=267.38  Aligned_cols=239  Identities=18%  Similarity=0.304  Sum_probs=186.6

Q ss_pred             cccccccCCCceEEEEEEc----CCcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeC
Q 021659           42 FHRIVYTNSHGAAYKARFQ----DGEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNI  114 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~----~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~  114 (309)
                      +.+.||+|+||.||+|.+.    +...|++|.+.....  ....+.+|+.++++++||||+++++++.. ...+++|||+
T Consensus         8 ~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~   87 (266)
T cd05033           8 IEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYM   87 (266)
T ss_pred             eeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEcC
Confidence            3468999999999999974    245789998854332  24578899999999999999999997754 6778999999


Q ss_pred             CCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-----
Q 021659          115 ENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-----  189 (309)
Q Consensus       115 ~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-----  189 (309)
                      ++++|.+++... ...+++..+..++.+++.|+.||   |+.+++|+||+|+||+++.++.++++|||++.....     
T Consensus        88 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~L---h~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~  163 (266)
T cd05033          88 ENGSLDKFLREN-DGKFTVGQLVGMLRGIASGMKYL---SEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATY  163 (266)
T ss_pred             CCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCcceEEEcCCCCEEECccchhhcccccccce
Confidence            999999998653 34789999999999999999999   778999999999999999999999999999875531     


Q ss_pred             ----cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHH
Q 021659          190 ----YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSK  262 (309)
Q Consensus       190 ----~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  262 (309)
                          ..++..|.+||...  ..+.++||||||+++++|++ |..||....... .........     ..+. ..    .
T Consensus       164 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~-~~~~~~~~~-----~~~~-~~----~  232 (266)
T cd05033         164 TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD-VIKAVEDGY-----RLPP-PM----D  232 (266)
T ss_pred             eccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH-HHHHHHcCC-----CCCC-CC----C
Confidence                12345799999754  34788999999999999998 999986543221 111111100     0011 11    1


Q ss_pred             HHHHHHHHHHHccCCCCCCCCChHHHHHHHhhh
Q 021659          263 ELKKLLAVARLCIKTKDKPTISIPQISRYLQNE  295 (309)
Q Consensus       263 ~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~  295 (309)
                      ....+.+++.+||+.+|++||++.++++.|+++
T Consensus       233 ~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         233 CPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            234566778899999999999999999999865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.6e-38  Score=258.09  Aligned_cols=236  Identities=17%  Similarity=0.193  Sum_probs=192.1

Q ss_pred             cccccccCCCceEEEEEE-cCCcEEEEEEecccccc----HHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCC
Q 021659           42 FHRIVYTNSHGAAYKARF-QDGEVALVKEIQALNLE----KDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIE  115 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~----~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~  115 (309)
                      +.+.||.|.||.||.|+. +++-+||+|++..+...    ...+.+|+++-..|+||||+++|+++.+ ...|+++||..
T Consensus        26 igr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEya~  105 (281)
T KOG0580|consen   26 IGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYAP  105 (281)
T ss_pred             ccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEecC
Confidence            347899999999999996 56789999999655433    3578899999999999999999997765 67889999999


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc-----ccc
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-----RNY  190 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-----~~~  190 (309)
                      .|++...+..+....+++...+.++.|++.||.||   |.+.++||||||+|+|++..+.+|++|||.+...     ...
T Consensus       106 ~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~---h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~tl  182 (281)
T KOG0580|consen  106 RGELYKDLQEGRMKRFDEQRAATYIKQLANALLYC---HLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKTL  182 (281)
T ss_pred             CchHHHHHHhcccccccccchhHHHHHHHHHHHHh---ccCCcccCCCCHHHhccCCCCCeeccCCCceeecCCCCceee
Confidence            99999999876678899999999999999999999   8999999999999999999999999999987544     344


Q ss_pred             CCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHH
Q 021659          191 ATMPHSSCPEDC--STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL  268 (309)
Q Consensus       191 ~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~  268 (309)
                      .||.-|.+||..  ...+...|+|++|++.||++.|.+||.... .....+....    .++..|       +.-.....
T Consensus       183 cgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-~~etYkrI~k----~~~~~p-------~~is~~a~  250 (281)
T KOG0580|consen  183 CGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-HSETYKRIRK----VDLKFP-------STISGGAA  250 (281)
T ss_pred             ecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-hHHHHHHHHH----ccccCC-------cccChhHH
Confidence            788999999964  445789999999999999999999998654 2222221111    111112       11133445


Q ss_pred             HHHHHccCCCCCCCCChHHHHHHH
Q 021659          269 AVARLCIKTKDKPTISIPQISRYL  292 (309)
Q Consensus       269 ~l~~~cl~~dp~~Rps~~evl~~L  292 (309)
                      +++.+|+..+|.+|.+..|+.+.-
T Consensus       251 dlI~~ll~~~p~~r~~l~~v~~hp  274 (281)
T KOG0580|consen  251 DLISRLLVKNPIERLALTEVMDHP  274 (281)
T ss_pred             HHHHHHhccCccccccHHHHhhhH
Confidence            667799999999999999988653

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=2.8e-37  Score=266.31  Aligned_cols=235  Identities=17%  Similarity=0.222  Sum_probs=182.2

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      +.||+|+||.||+|.. .+++.+|+|.+....  .....+.+|++++++++||||+++++++.. ...++||||+++++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            3689999999999997 468899999875322  224578999999999999999999998765 667899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccccc---------
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNY---------  190 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~---------  190 (309)
                      .+++... ...+++..+..++.|++.||.||   |+.+++|+||+|+||+++.++.+|++|||++......         
T Consensus        81 ~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~l---H~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  156 (252)
T cd05084          81 LTFLRTE-GPRLKVKELIQMVENAAAGMEYL---ESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMK  156 (252)
T ss_pred             HHHHHhC-CCCCCHHHHHHHHHHHHHHHHHH---HhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCC
Confidence            9998642 34688999999999999999999   7889999999999999999999999999997643221         


Q ss_pred             CCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          191 ATMPHSSCPEDCST--QDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       191 ~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ..+..|++||....  .+.++||||||+++|+|++ |..||..........  ......     .....    ......+
T Consensus       157 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~--~~~~~~-----~~~~~----~~~~~~~  225 (252)
T cd05084         157 QIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTRE--AIEQGV-----RLPCP----ELCPDAV  225 (252)
T ss_pred             CCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHH--HHHcCC-----CCCCc----ccCCHHH
Confidence            11245899997533  4678999999999999998 888886543221111  110000     01111    1113456


Q ss_pred             HHHHHHccCCCCCCCCChHHHHHHHh
Q 021659          268 LAVARLCIKTKDKPTISIPQISRYLQ  293 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~evl~~L~  293 (309)
                      .+++.+||+++|++|||+.++++.|+
T Consensus       226 ~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         226 YRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            67777999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=1.3e-37  Score=277.65  Aligned_cols=229  Identities=20%  Similarity=0.278  Sum_probs=178.6

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccc----cccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQAL----NLEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~----~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||++... ++..||+|.+...    ....+.+..|..++..+ +||||+++++++.+ ...|+||||+.+
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            36899999999999974 5789999998643    22334567788888755 89999999997654 778899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc-------cc
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-------RN  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-------~~  189 (309)
                      ++|.+++..  ...+++..+..++.|++.||+||   |+.+++||||||+||+++.++.++|+|||++...       ..
T Consensus        81 g~L~~~i~~--~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  155 (316)
T cd05620          81 GDLMFHIQD--KGRFDLYRATFYAAEIVCGLQFL---HSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRAST  155 (316)
T ss_pred             CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceec
Confidence            999999876  46789999999999999999999   7889999999999999999999999999987632       22


Q ss_pred             cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          190 YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       190 ~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ..++..|+|||...  ..+.++||||||+++|+|++|+.||...... .........       .+.++.. .   ...+
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~-~~~~~~~~~-------~~~~~~~-~---~~~~  223 (316)
T cd05620         156 FCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED-ELFESIRVD-------TPHYPRW-I---TKES  223 (316)
T ss_pred             cCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH-HHHHHHHhC-------CCCCCCC-C---CHHH
Confidence            35788999999753  3578899999999999999999999765432 211111110       1112111 1   2344


Q ss_pred             HHHHHHccCCCCCCCCChH-HHH
Q 021659          268 LAVARLCIKTKDKPTISIP-QIS  289 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~-evl  289 (309)
                      .+++.+||+.||++||++. +++
T Consensus       224 ~~li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         224 KDILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             HHHHHHHccCCHHHcCCChHHHH
Confidence            5566699999999999985 565

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=3.5e-37  Score=280.65  Aligned_cols=234  Identities=14%  Similarity=0.196  Sum_probs=182.1

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||+++.. +++.||+|.+....    ...+.+..|+.+++.++||||+++++++.+ ...++||||+++|
T Consensus        49 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg  128 (370)
T cd05596          49 KVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGG  128 (370)
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCCCCC
Confidence            58999999999999974 58899999985322    223457789999999999999999997655 6788999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc--------c
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR--------N  189 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~--------~  189 (309)
                      +|.+++..   ..+++..+..++.+++.||.||   |+.+++||||||+||+++.++.+||+|||++....        .
T Consensus       129 ~L~~~l~~---~~l~~~~~~~~~~qi~~aL~~L---H~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~~~  202 (370)
T cd05596         129 DLVNLMSN---YDIPEKWARFYTAEVVLALDAI---HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDT  202 (370)
T ss_pred             cHHHHHHh---cCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcccCCC
Confidence            99999864   4688889999999999999999   77899999999999999999999999999986432        2


Q ss_pred             cCCCCCCCCCCCCCC------CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHH
Q 021659          190 YATMPHSSCPEDCST------QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKE  263 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~------~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  263 (309)
                      ..+++.|+|||....      .+.++|||||||++|+|++|+.||..................   +   ..+..  ...
T Consensus       203 ~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~---~---~~~~~--~~~  274 (370)
T cd05596         203 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNS---L---TFPDD--IEI  274 (370)
T ss_pred             CCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCc---C---CCCCc--CCC
Confidence            357889999996432      468899999999999999999999865443222221111000   0   01110  011


Q ss_pred             HHHHHHHHHHccCCCCCC--CCChHHHHHH
Q 021659          264 LKKLLAVARLCIKTKDKP--TISIPQISRY  291 (309)
Q Consensus       264 ~~~l~~l~~~cl~~dp~~--Rps~~evl~~  291 (309)
                      ...+.+++.+||..+|++  ||++.|+++.
T Consensus       275 s~~~~~li~~~L~~~p~r~~R~s~~ell~h  304 (370)
T cd05596         275 SKQAKDLICAFLTDREVRLGRNGVDEIKSH  304 (370)
T ss_pred             CHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence            234455666999999988  9999999753

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=2.2e-37  Score=280.36  Aligned_cols=229  Identities=18%  Similarity=0.258  Sum_probs=177.4

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      +.||+|+||.||++... +++.||+|.+....  ...+.+.+|+++++.++|+||+++++++.. ...++||||+++++|
T Consensus        80 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L  159 (353)
T PLN00034         80 NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSL  159 (353)
T ss_pred             hhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCCcc
Confidence            57999999999999964 68899999985332  224578899999999999999999997764 677899999999998


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYAT  192 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~~  192 (309)
                      .+.      ...++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....       ...+
T Consensus       160 ~~~------~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~g  230 (353)
T PLN00034        160 EGT------HIADEQFLADVARQILSGIAYL---HRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVG  230 (353)
T ss_pred             ccc------ccCCHHHHHHHHHHHHHHHHHH---HHCCEeecCCCHHHEEEcCCCCEEEcccccceeccccccccccccc
Confidence            653      3355778889999999999999   78899999999999999999999999999986543       2357


Q ss_pred             CCCCCCCCCCCC-------CCCCCcEeehhhHHHHHHhCCCCCCCCc--cHHHHHHHhcccccccccccCcCCCCCCHHH
Q 021659          193 MPHSSCPEDCST-------QDCSNIIFQLGVLILELVTGQSPEEGDV--DLIQWIQESSISSSIHRMIDPDLGGSYDSKE  263 (309)
Q Consensus       193 ~~~~~~PE~~~~-------~~~~~Dv~slG~~l~~l~tg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  263 (309)
                      +..|++||....       .+.++|||||||++|+|++|+.||....  .............      .+...    ...
T Consensus       231 t~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~------~~~~~----~~~  300 (353)
T PLN00034        231 TIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQ------PPEAP----ATA  300 (353)
T ss_pred             CccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccC------CCCCC----Ccc
Confidence            889999997532       1458999999999999999999997332  1111111110000      01111    112


Q ss_pred             HHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          264 LKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       264 ~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      ...+.+++.+||+.||++|||+.|+++.
T Consensus       301 ~~~l~~li~~~l~~~P~~Rpt~~ell~h  328 (353)
T PLN00034        301 SREFRHFISCCLQREPAKRWSAMQLLQH  328 (353)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            3456667779999999999999999864

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=2e-37  Score=276.50  Aligned_cols=229  Identities=17%  Similarity=0.233  Sum_probs=176.9

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||+|... +++.||+|.+....    ...+.+..|..++..+ +||||+++++++.. ...++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            35899999999999974 57889999985432    2234556677777654 79999999997654 678899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------c
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------N  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~  189 (309)
                      |+|..++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....       .
T Consensus        81 g~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~L---H~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~  155 (316)
T cd05592          81 GDLMFHIQS--SGRFDEARARFYAAEIICGLQFL---HKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKAST  155 (316)
T ss_pred             CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCcccc
Confidence            999999876  46799999999999999999999   77899999999999999999999999999986431       2


Q ss_pred             cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          190 YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ..+++.|+|||...+  .+.++|||||||++|+|++|+.||.+.... +........       .+.++.. .   ...+
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~-~~~~~i~~~-------~~~~~~~-~---~~~~  223 (316)
T cd05592         156 FCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED-ELFDSILND-------RPHFPRW-I---SKEA  223 (316)
T ss_pred             ccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHcC-------CCCCCCC-C---CHHH
Confidence            357889999997543  478899999999999999999999865432 111111100       1111111 1   2344


Q ss_pred             HHHHHHccCCCCCCCCChH-HHH
Q 021659          268 LAVARLCIKTKDKPTISIP-QIS  289 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~-evl  289 (309)
                      .+++.+||+.||++||++. +++
T Consensus       224 ~~ll~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05592         224 KDCLSKLFERDPTKRLGVDGDIR  246 (316)
T ss_pred             HHHHHHHccCCHHHcCCChHHHH
Confidence            5566699999999999875 554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=3.5e-37  Score=269.81  Aligned_cols=232  Identities=15%  Similarity=0.251  Sum_probs=178.5

Q ss_pred             cccCCCceEEEEEE-cCCcEEEEEEeccccc----cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           46 VYTNSHGAAYKARF-QDGEVALVKEIQALNL----EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        46 lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~----~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      ||+|+||.||++.. .+++.||+|.+.....    ....+..|++++++++||||+++.+++.+ ...++||||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            68999999999996 4589999998853221    23345679999999999999999987654 678899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------ccCCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------NYATM  193 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------~~~~~  193 (309)
                      .+++.......+++..+..++.|++.||+||   |+.+++||||+|+||+++.++.++|+|||++....      ...++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~  157 (277)
T cd05607          81 KYHIYNVGERGLEMERVIHYSAQITCGILHL---HSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGT  157 (277)
T ss_pred             HHHHHhccccCCCHHHHHHHHHHHHHHHHHH---HHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCC
Confidence            9988654456689999999999999999999   78899999999999999999999999999886443      23577


Q ss_pred             CCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHH--HHHHhcccccccccccCcCCCCCCHHHHHHHHH
Q 021659          194 PHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQ--WIQESSISSSIHRMIDPDLGGSYDSKELKKLLA  269 (309)
Q Consensus       194 ~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~  269 (309)
                      ..|.|||....  .+.++||||||+++|+|++|+.||........  .+.........      .......   ...+.+
T Consensus       158 ~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~---~~~~~~  228 (277)
T cd05607         158 NGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEV------KFEHQNF---TEESKD  228 (277)
T ss_pred             CCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccc------ccccccC---CHHHHH
Confidence            89999997433  47889999999999999999999975432111  11110000000      0001111   234556


Q ss_pred             HHHHccCCCCCCCCChHHHH
Q 021659          270 VARLCIKTKDKPTISIPQIS  289 (309)
Q Consensus       270 l~~~cl~~dp~~Rps~~evl  289 (309)
                      ++.+||++||++||++.|++
T Consensus       229 li~~~L~~~P~~R~~~~~~~  248 (277)
T cd05607         229 ICRLFLAKKPEDRLGSREKN  248 (277)
T ss_pred             HHHHHhccCHhhCCCCccch
Confidence            66699999999999997655

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=1.1e-37  Score=280.47  Aligned_cols=242  Identities=17%  Similarity=0.249  Sum_probs=185.5

Q ss_pred             ccccccCCCceEEEEEEc------CCcEEEEEEeccccc--cHHHHHHHHHHHccC-CCCCcceEeeeEeC--CeeEEEE
Q 021659           43 HRIVYTNSHGAAYKARFQ------DGEVALVKEIQALNL--EKDAFYREIQLLGRL-HHRHLLALQGFSTG--RKRLLVF  111 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~------~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l-~h~niv~~~~~~~~--~~~~lv~  111 (309)
                      .+.||+|+||.||+|...      .++.||+|++.....  ..+.+..|+++++++ +|+||+++++++..  ...++++
T Consensus        12 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~   91 (337)
T cd05054          12 GKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIV   91 (337)
T ss_pred             hcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEE
Confidence            468999999999999732      347899999864322  234678899999999 79999999997653  5677999


Q ss_pred             eeCCCCCHHHhhcCCC-----------------------------------------------------------CCCCC
Q 021659          112 DNIENGSLKEHLNDPL-----------------------------------------------------------KTPLD  132 (309)
Q Consensus       112 e~~~~~sL~~~i~~~~-----------------------------------------------------------~~~l~  132 (309)
                      ||+++++|.+++....                                                           ...++
T Consensus        92 ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  171 (337)
T cd05054          92 EYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLT  171 (337)
T ss_pred             ecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCC
Confidence            9999999999885321                                                           12688


Q ss_pred             HHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---------ccCCCCCCCCCCCC-
Q 021659          133 WKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---------NYATMPHSSCPEDC-  202 (309)
Q Consensus       133 ~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---------~~~~~~~~~~PE~~-  202 (309)
                      +..+..++.+++.||.||   |+.+++||||||.||+++.++.++|+|||++....         ...++..|+|||.. 
T Consensus       172 ~~~~~~~~~qi~~aL~~l---H~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~  248 (337)
T cd05054         172 LEDLISYSFQVARGMEFL---ASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIF  248 (337)
T ss_pred             HHHHHHHHHHHHHHHHHH---HhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhc
Confidence            999999999999999999   78899999999999999999999999999986532         12334679999964 


Q ss_pred             -CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCC
Q 021659          203 -STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDK  280 (309)
Q Consensus       203 -~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~  280 (309)
                       ...+.++|||||||++++|++ |..||.+............ ....     +....    .....+.+++.+||+.+|+
T Consensus       249 ~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~-~~~~-----~~~~~----~~~~~~~~l~~~cl~~~p~  318 (337)
T cd05054         249 DKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLK-EGTR-----MRAPE----YATPEIYSIMLDCWHNNPE  318 (337)
T ss_pred             CCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHh-ccCC-----CCCCc----cCCHHHHHHHHHHccCChh
Confidence             335789999999999999998 9999975322111111111 1100     11111    1134567778899999999


Q ss_pred             CCCChHHHHHHHhhhhc
Q 021659          281 PTISIPQISRYLQNEVD  297 (309)
Q Consensus       281 ~Rps~~evl~~L~~~~~  297 (309)
                      +||++.|+++.|+++++
T Consensus       319 ~RPs~~ell~~l~~~~~  335 (337)
T cd05054         319 DRPTFSELVEILGDLLQ  335 (337)
T ss_pred             hCcCHHHHHHHHHHHHh
Confidence            99999999999998765

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=5.4e-38  Score=262.20  Aligned_cols=222  Identities=22%  Similarity=0.266  Sum_probs=182.1

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccccc----HHHHHHHHHHHccCCCCCcceEeeeE-eCCeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLE----KDAFYREIQLLGRLHHRHLLALQGFS-TGRKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~----~~~~~~ei~~l~~l~h~niv~~~~~~-~~~~~~lv~e~~~~~  117 (309)
                      +-||.|+||.|.+++.+ +|..+|+|++.....-    .+...+|..+|+.+.||+++++++-+ +..+.|+||||++||
T Consensus        50 ~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv~GG  129 (355)
T KOG0616|consen   50 KTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYVPGG  129 (355)
T ss_pred             eeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEeccCCc
Confidence            46999999999999964 5889999998644322    24567899999999999999999855 458899999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc----cCCC
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN----YATM  193 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~----~~~~  193 (309)
                      -|..++.+  .+.|+++.+..++.+|+.||+||   |+.+|++|||||+|||+|++|.+||+|||+++....    -.||
T Consensus       130 ElFS~Lrk--~~rF~e~~arFYAAeivlAleyl---H~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~TlCGT  204 (355)
T KOG0616|consen  130 ELFSYLRK--SGRFSEPHARFYAAEIVLALEYL---HSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWTLCGT  204 (355)
T ss_pred             cHHHHHHh--cCCCCchhHHHHHHHHHHHHHHH---HhcCeeeccCChHHeeeccCCcEEEEeccceEEecCcEEEecCC
Confidence            99999987  68899999999999999999999   888999999999999999999999999999987764    3799


Q ss_pred             CCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHH
Q 021659          194 PHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVA  271 (309)
Q Consensus       194 ~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~  271 (309)
                      |.|+|||...  +++.++|=||||+++|||+.|.+||.....+.-+.......-..+..+         +.++++|++  
T Consensus       205 PeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~~f---------s~~~kdLl~--  273 (355)
T KOG0616|consen  205 PEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPSYF---------SSDAKDLLK--  273 (355)
T ss_pred             ccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCccc---------CHHHHHHHH--
Confidence            9999999754  457899999999999999999999988766544433333222222222         223444444  


Q ss_pred             HHccCCCCCCC
Q 021659          272 RLCIKTKDKPT  282 (309)
Q Consensus       272 ~~cl~~dp~~R  282 (309)
                       ..|+.|-..|
T Consensus       274 -~LL~vD~t~R  283 (355)
T KOG0616|consen  274 -KLLQVDLTKR  283 (355)
T ss_pred             -HHHhhhhHhh
Confidence             8888887777

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=3.9e-37  Score=269.95  Aligned_cols=232  Identities=16%  Similarity=0.267  Sum_probs=178.6

Q ss_pred             cccCCCceEEEEEEc-CCcEEEEEEeccccc----cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           46 VYTNSHGAAYKARFQ-DGEVALVKEIQALNL----EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        46 lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~----~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      ||+|+||.||++... +++.+|+|.+.....    ..+.+..|+++++.++|+||+.+.+++.. ...++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            689999999999864 678999999854322    22456789999999999999999986654 678899999999999


Q ss_pred             HHhhcC--CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------cc
Q 021659          120 KEHLND--PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NY  190 (309)
Q Consensus       120 ~~~i~~--~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~  190 (309)
                      ..++..  .....+++..+..++.|++.||.||   |+.+++||||+|+||+++.++.++|+|||++....       ..
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~  157 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHL---HQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGY  157 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccccc
Confidence            987743  2246799999999999999999999   78899999999999999999999999999986432       23


Q ss_pred             CCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHH--HHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          191 ATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQ--WIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       191 ~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                      .+++.|+|||...+  .+.++||||||+++|+|++|+.||........  ......        .....  .........
T Consensus       158 ~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~--------~~~~~--~~~~~~~~~  227 (280)
T cd05608         158 AGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRI--------LNDSV--TYPDKFSPA  227 (280)
T ss_pred             CCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhh--------cccCC--CCcccCCHH
Confidence            56789999997543  46889999999999999999999975432111  111110        00100  011112344


Q ss_pred             HHHHHHHccCCCCCCCC-----ChHHHHH
Q 021659          267 LLAVARLCIKTKDKPTI-----SIPQISR  290 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rp-----s~~evl~  290 (309)
                      +.+++.+||+.||++||     ++.++++
T Consensus       228 ~~~li~~~l~~~P~~R~~~~~~~~~~~l~  256 (280)
T cd05608         228 SKSFCEALLAKDPEKRLGFRDGNCDGLRT  256 (280)
T ss_pred             HHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence            55666799999999999     6677774

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1e-38  Score=273.98  Aligned_cols=239  Identities=18%  Similarity=0.231  Sum_probs=183.8

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC---C-eeE--EEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG---R-KRL--LVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~---~-~~~--lv~e~~~~  116 (309)
                      +++|.|+||.||.|+. ++++.||+|++-.+..   --.+|+++|+.+.|||||++.-++..   . ..|  +||||++.
T Consensus        30 ~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r---~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~  106 (364)
T KOG0658|consen   30 RLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR---YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPE  106 (364)
T ss_pred             EEEeecccceEEEEEEcCCCceeEEEEecCCCC---cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhchH
Confidence            5899999999999996 4568899998743332   33568999999999999999886532   2 233  89999998


Q ss_pred             CCHHHhhcC--CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC-CceeEeccccccccc-----
Q 021659          117 GSLKEHLND--PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN-FTAKLSDVGFFNSVR-----  188 (309)
Q Consensus       117 ~sL~~~i~~--~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~-~~~kl~dfg~~~~~~-----  188 (309)
                       +|.+.++.  ..++.++...+.-++.|+++||.||   |+.+|+||||||+|+|+|.+ |.+||||||.|+...     
T Consensus       107 -tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yL---h~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epn  182 (364)
T KOG0658|consen  107 -TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYL---HSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPN  182 (364)
T ss_pred             -HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHH---HhcCcccCCCChheEEEcCCCCeEEeccCCcceeeccCCCc
Confidence             99998873  2357788888999999999999999   77899999999999999966 999999999998664     


Q ss_pred             -ccCCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcc-----cccc-------ccccc
Q 021659          189 -NYATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSI-----SSSI-------HRMID  252 (309)
Q Consensus       189 -~~~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~-----~~~~-------~~~~~  252 (309)
                       .+.+|..|.|||...+   ++.+.||||.||++.||+-|++.|+++....+.+.....     .+.+       .+...
T Consensus       183 iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~  262 (364)
T KOG0658|consen  183 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKF  262 (364)
T ss_pred             eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccC
Confidence             3466788999997544   478999999999999999999999988766665432111     0111       11111


Q ss_pred             CcCCCC-----CCHHHHHHHHHHHHHccCCCCCCCCChHHHH
Q 021659          253 PDLGGS-----YDSKELKKLLAVARLCIKTKDKPTISIPQIS  289 (309)
Q Consensus       253 ~~l~~~-----~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl  289 (309)
                      |.+...     .......+.++++.++|+++|+.|.++.|++
T Consensus       263 p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l  304 (364)
T KOG0658|consen  263 PQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEAL  304 (364)
T ss_pred             cccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHh
Confidence            222111     1222345667777799999999999999988

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=2.1e-37  Score=272.64  Aligned_cols=244  Identities=16%  Similarity=0.170  Sum_probs=179.9

Q ss_pred             ccccccCCCceEEEEEE-c-CCcEEEEEEeccccc---cHHHHHHHHHHHccC---CCCCcceEeeeEe------CCeeE
Q 021659           43 HRIVYTNSHGAAYKARF-Q-DGEVALVKEIQALNL---EKDAFYREIQLLGRL---HHRHLLALQGFST------GRKRL  108 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~-~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l---~h~niv~~~~~~~------~~~~~  108 (309)
                      .+.||+|+||.||+|+. . ++..||+|.+.....   ....+.+|+++++.+   +||||+++++++.      ....+
T Consensus         6 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~   85 (290)
T cd07862           6 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT   85 (290)
T ss_pred             eeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEE
Confidence            36799999999999986 2 467899998853322   234566777777666   6999999999763      24578


Q ss_pred             EEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc
Q 021659          109 LVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR  188 (309)
Q Consensus       109 lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~  188 (309)
                      +||||+++ +|.+++.......+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....
T Consensus        86 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~l---H~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  161 (290)
T cd07862          86 LVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL---HSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS  161 (290)
T ss_pred             EEEccCCC-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCCHHHEEEcCCCCEEEccccceEecc
Confidence            99999975 999998765456789999999999999999999   78899999999999999999999999999986443


Q ss_pred             ------ccCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHh--cc---cccccc------
Q 021659          189 ------NYATMPHSSCPEDC--STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQES--SI---SSSIHR------  249 (309)
Q Consensus       189 ------~~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~--~~---~~~~~~------  249 (309)
                            ...++..|+|||..  ...+.++||||||+++|+|++|+.||.+...........  ..   ....+.      
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  241 (290)
T cd07862         162 FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR  241 (290)
T ss_pred             CCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccc
Confidence                  23467889999964  334778999999999999999999998765433221111  00   000000      


Q ss_pred             -cccCcCCC---CCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          250 -MIDPDLGG---SYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       250 -~~~~~l~~---~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                       ...+....   .........+.+++.+||+.||++|||+.|+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         242 QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             hhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence             00000000   000112344567777999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=5.9e-37  Score=270.12  Aligned_cols=242  Identities=20%  Similarity=0.285  Sum_probs=187.4

Q ss_pred             ccccccCCCceEEEEEEc------CCcEEEEEEecccccc-HHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeC
Q 021659           43 HRIVYTNSHGAAYKARFQ------DGEVALVKEIQALNLE-KDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNI  114 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~------~~~~va~K~~~~~~~~-~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~  114 (309)
                      .+.||+|+||.||+++..      ++..+++|.+...... .+.+.+|++++++++|+||+++++++.. ...++||||+
T Consensus        10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   89 (291)
T cd05094          10 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYM   89 (291)
T ss_pred             eeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEecC
Confidence            368999999999999842      3456888887544332 3568899999999999999999998765 6678999999


Q ss_pred             CCCCHHHhhcCCC--------------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEec
Q 021659          115 ENGSLKEHLNDPL--------------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSD  180 (309)
Q Consensus       115 ~~~sL~~~i~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~d  180 (309)
                      ++++|.+++....              ...+++..++.++.+++.||+||   |+++++|+||+|+||+++.++.++|+|
T Consensus        90 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~l---H~~~i~H~dlkp~Nil~~~~~~~~l~d  166 (291)
T cd05094          90 KHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGD  166 (291)
T ss_pred             CCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHH---HhCCeeecccCcceEEEccCCcEEECC
Confidence            9999999986421              23488999999999999999999   788999999999999999999999999


Q ss_pred             cccccccc---------ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhccccccc
Q 021659          181 VGFFNSVR---------NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIH  248 (309)
Q Consensus       181 fg~~~~~~---------~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~  248 (309)
                      ||++....         ...++..|++||...  ..+.++||||||+++|+|+| |..||....... .... ...+...
T Consensus       167 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~~~-~~~~~~~  244 (291)
T cd05094         167 FGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE-VIEC-ITQGRVL  244 (291)
T ss_pred             CCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHH-HhCCCCC
Confidence            99986432         123456799999643  34678999999999999998 999986543221 1111 1111111


Q ss_pred             ccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcc
Q 021659          249 RMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDI  298 (309)
Q Consensus       249 ~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~  298 (309)
                      .     ...    .....+.+++.+||+.+|++|||+.+|++.|++....
T Consensus       245 ~-----~~~----~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~  285 (291)
T cd05094         245 E-----RPR----VCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA  285 (291)
T ss_pred             C-----CCc----cCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence            1     111    1234566777799999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=4.6e-37  Score=267.79  Aligned_cols=240  Identities=17%  Similarity=0.230  Sum_probs=183.0

Q ss_pred             cccccccCCCceEEEEEEcCC-c--EEEEEEecccc---ccHHHHHHHHHHHccCCCCCcceEeeeEeC-------CeeE
Q 021659           42 FHRIVYTNSHGAAYKARFQDG-E--VALVKEIQALN---LEKDAFYREIQLLGRLHHRHLLALQGFSTG-------RKRL  108 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~~-~--~va~K~~~~~~---~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-------~~~~  108 (309)
                      +.+.||+|+||.||+|.+..+ .  .+|+|.+....   ...+.+.+|+++++.++|+||+++++++..       ...+
T Consensus         3 i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   82 (272)
T cd05075           3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPV   82 (272)
T ss_pred             cccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcE
Confidence            347899999999999997543 2  58999875432   234578899999999999999999997632       2457


Q ss_pred             EEEeeCCCCCHHHhhcC----CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccc
Q 021659          109 LVFDNIENGSLKEHLND----PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFF  184 (309)
Q Consensus       109 lv~e~~~~~sL~~~i~~----~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~  184 (309)
                      +++||+++++|.+++..    .....+++..+..++.|++.||.||   |+++++|+||||+||+++.++.++|+|||++
T Consensus        83 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~  159 (272)
T cd05075          83 VILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYL---SSKSFIHRDLAARNCMLNENMNVCVADFGLS  159 (272)
T ss_pred             EEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHH---HHCCeeccccchhheEEcCCCCEEECCCCcc
Confidence            99999999999988732    1235689999999999999999999   7789999999999999999999999999998


Q ss_pred             ccccc---------cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccc
Q 021659          185 NSVRN---------YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMID  252 (309)
Q Consensus       185 ~~~~~---------~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  252 (309)
                      .....         ...+..|++||....  .+.++||||||+++|+|++ |+.||.+.... ....... .+...    
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-~~~~~~~-~~~~~----  233 (272)
T cd05075         160 KKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS-EIYDYLR-QGNRL----  233 (272)
T ss_pred             cccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHH-cCCCC----
Confidence            75422         123457889997533  4788999999999999999 88998764332 1111111 11110    


Q ss_pred             CcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhh
Q 021659          253 PDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNE  295 (309)
Q Consensus       253 ~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~  295 (309)
                       ....    .....+.+++.+||+.||++|||+.++++.|+++
T Consensus       234 -~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         234 -KQPP----DCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             -CCCC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence             0111    1123466777799999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=3.4e-37  Score=276.96  Aligned_cols=184  Identities=17%  Similarity=0.264  Sum_probs=157.1

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL  119 (309)
                      +.||+|+||.||++... ++..+|+|.+....  .....+.+|++++++++|+||+++++++. +...++||||+++++|
T Consensus        11 ~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L   90 (333)
T cd06650          11 SELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL   90 (333)
T ss_pred             ccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCCCcH
Confidence            68999999999999975 57888999875432  22356889999999999999999999765 4778899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-----ccCCCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-----NYATMP  194 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-----~~~~~~  194 (309)
                      .+++..  ...+++..+..++.+++.||.|||  +..+++|+||||+||+++.++.+||+|||++....     ...++.
T Consensus        91 ~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH--~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~  166 (333)
T cd06650          91 DQVLKK--AGRIPEQILGKVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR  166 (333)
T ss_pred             HHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH--hcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccCCCCc
Confidence            999976  466889999999999999999995  23579999999999999999999999999986432     235778


Q ss_pred             CCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCC
Q 021659          195 HSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGD  231 (309)
Q Consensus       195 ~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~  231 (309)
                      .|+|||...+  .+.++|||||||++|+|++|+.||...
T Consensus       167 ~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~  205 (333)
T cd06650         167 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP  205 (333)
T ss_pred             cccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence            9999997544  477899999999999999999999754

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=2e-37  Score=278.01  Aligned_cols=235  Identities=17%  Similarity=0.174  Sum_probs=183.2

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEeccccc----cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQALNL----EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~----~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      .+.||+|+||.||++.. .+++.||+|.+.....    ..+.+..|+.+++.++|+||+++++++.+ ...++||||+++
T Consensus         6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   85 (330)
T cd05601           6 KSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPG   85 (330)
T ss_pred             EEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCC
Confidence            36899999999999996 4688999999864332    33567889999999999999999987654 678899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------  189 (309)
                      ++|.+++... ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++.....       
T Consensus        86 ~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~l---H~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~  161 (330)
T cd05601          86 GDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSV---HQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSK  161 (330)
T ss_pred             CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCceeee
Confidence            9999999752 25799999999999999999999   788999999999999999999999999999865432       


Q ss_pred             -cCCCCCCCCCCCCC--------CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCC
Q 021659          190 -YATMPHSSCPEDCS--------TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYD  260 (309)
Q Consensus       190 -~~~~~~~~~PE~~~--------~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  260 (309)
                       ..+++.|+|||...        ..+.++||||||+++|+|++|+.||............... .....     .+..  
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~-~~~~~-----~~~~--  233 (330)
T cd05601         162 LPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNF-QRFLK-----FPED--  233 (330)
T ss_pred             cccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcC-CCccC-----CCCC--
Confidence             25788999999643        2367899999999999999999999866443322211111 00000     0110  


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          261 SKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       261 ~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ......+.+++.+||. +|++||++.+++.
T Consensus       234 ~~~~~~~~~li~~ll~-~p~~R~t~~~l~~  262 (330)
T cd05601         234 PKVSSDFLDLIQSLLC-GQKERLGYEGLCC  262 (330)
T ss_pred             CCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence            0112345556669997 9999999999884

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=2.7e-37  Score=273.89  Aligned_cols=242  Identities=14%  Similarity=0.162  Sum_probs=180.9

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      +.||+|+||.||+|... +++.||+|.+....  .....+.+|+.++++++||||+++++++.+ ...++||||+.+ +|
T Consensus        11 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~-~l   89 (303)
T cd07869          11 EKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVHT-DL   89 (303)
T ss_pred             eeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCCc-CH
Confidence            68999999999999975 68899999985432  223467889999999999999999997754 677899999965 88


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYAT  192 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~~  192 (309)
                      .+++... ...+++..+..++.|++.||.||   |+.+++|+||||+||+++.++.+||+|||++....       ...+
T Consensus        90 ~~~~~~~-~~~~~~~~~~~~~~qi~~al~~l---H~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~  165 (303)
T cd07869          90 CQYMDKH-PGGLHPENVKLFLFQLLRGLSYI---HQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVV  165 (303)
T ss_pred             HHHHHhC-CCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCCCcc
Confidence            8777542 35688999999999999999999   78899999999999999999999999999876432       2356


Q ss_pred             CCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhc---cccc---c------cccccCcCC-
Q 021659          193 MPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESS---ISSS---I------HRMIDPDLG-  256 (309)
Q Consensus       193 ~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~---~~~~---~------~~~~~~~l~-  256 (309)
                      ++.|+|||...+   .+.++|||||||++|+|++|+.||.+..+.........   ....   .      +........ 
T Consensus       166 ~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (303)
T cd07869         166 TLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTL  245 (303)
T ss_pred             cCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccc
Confidence            788999996432   46789999999999999999999986544333222110   0000   0      000000000 


Q ss_pred             -CCCCH-------HHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          257 -GSYDS-------KELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       257 -~~~~~-------~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                       .....       .....+.+++.+||+.||++|||+.|+++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         246 YSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             cCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence             00000       01234556777999999999999999985

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=3.6e-37  Score=271.08  Aligned_cols=245  Identities=21%  Similarity=0.295  Sum_probs=188.8

Q ss_pred             cccccccCCCceEEEEEE------cCCcEEEEEEecccc-ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEee
Q 021659           42 FHRIVYTNSHGAAYKARF------QDGEVALVKEIQALN-LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~------~~~~~va~K~~~~~~-~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      +.+.||+|+||.||++..      .++..+++|.+.... ...+.+.+|++++++++||||+++++++.. ...++|+||
T Consensus         9 ~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   88 (288)
T cd05093           9 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEY   88 (288)
T ss_pred             eccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEc
Confidence            346899999999999984      234568899885433 234578999999999999999999998765 677899999


Q ss_pred             CCCCCHHHhhcCC-----------CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccc
Q 021659          114 IENGSLKEHLNDP-----------LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVG  182 (309)
Q Consensus       114 ~~~~sL~~~i~~~-----------~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg  182 (309)
                      +++++|.+++...           ....+++..+..++.+++.||+||   |+.+++||||||+||+++.++.++|+|||
T Consensus        89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~l---H~~~i~H~dlkp~Nili~~~~~~kl~dfg  165 (288)
T cd05093          89 MKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFG  165 (288)
T ss_pred             CCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeecccCcceEEEccCCcEEeccCC
Confidence            9999999998632           123589999999999999999999   78899999999999999999999999999


Q ss_pred             cccccc---------ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhccccccccc
Q 021659          183 FFNSVR---------NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRM  250 (309)
Q Consensus       183 ~~~~~~---------~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~  250 (309)
                      ++....         ...++..|+|||...  ..+.++|+||||+++++|++ |..||....... ..... ..+..   
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~-~~~~i-~~~~~---  240 (288)
T cd05093         166 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE-VIECI-TQGRV---  240 (288)
T ss_pred             ccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHH-HcCCc---
Confidence            986432         112355799999653  34788999999999999998 899986543211 11111 11111   


Q ss_pred             ccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcccc
Q 021659          251 IDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQC  300 (309)
Q Consensus       251 ~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~  300 (309)
                        +......    ...+.+++.+||+.||.+|||+.++++.|+++.....
T Consensus       241 --~~~~~~~----~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~~  284 (288)
T cd05093         241 --LQRPRTC----PKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKASP  284 (288)
T ss_pred             --CCCCCCC----CHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhcc
Confidence              1111111    2356777779999999999999999999998776543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=1.7e-37  Score=277.13  Aligned_cols=230  Identities=19%  Similarity=0.254  Sum_probs=180.6

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||++... ++..||+|.+....    .....+..|+++++.+ +||||+++++++.. ...++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            36899999999999974 47899999986432    2334577888999888 69999999997654 678899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc-------cc
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-------RN  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-------~~  189 (309)
                      ++|..++..  ...+++..+..++.|++.||.||   |+.+++|+||||+||+++.++.++|+|||++...       ..
T Consensus        81 ~~L~~~~~~--~~~l~~~~~~~~~~qi~~~l~~L---H~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~  155 (318)
T cd05570          81 GDLMFHIQR--SGRFDEPRARFYAAEIVLGLQFL---HERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTST  155 (318)
T ss_pred             CCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccc
Confidence            999999876  45799999999999999999999   7889999999999999999999999999987532       12


Q ss_pred             cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          190 YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       190 ~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ..++..|+|||...  ..+.++|+|||||++|+|++|+.||....... ........       ....+...    ...+
T Consensus       156 ~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~-~~~~i~~~-------~~~~~~~~----~~~~  223 (318)
T cd05570         156 FCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDE-LFQSILED-------EVRYPRWL----SKEA  223 (318)
T ss_pred             eecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHH-HHHHHHcC-------CCCCCCcC----CHHH
Confidence            34778999999754  34788999999999999999999997554221 11111110       01111111    2345


Q ss_pred             HHHHHHccCCCCCCCCCh-----HHHHH
Q 021659          268 LAVARLCIKTKDKPTISI-----PQISR  290 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~-----~evl~  290 (309)
                      .+++.+||+.||++||++     .+++.
T Consensus       224 ~~li~~~l~~dP~~R~s~~~~~~~~ll~  251 (318)
T cd05570         224 KSILKSFLTKNPEKRLGCLPTGEQDIKG  251 (318)
T ss_pred             HHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence            566669999999999999     77764

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=3.5e-37  Score=275.79  Aligned_cols=230  Identities=17%  Similarity=0.261  Sum_probs=177.7

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHH---ccCCCCCcceEeeeEeC-CeeEEEEee
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLL---GRLHHRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l---~~l~h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      .+.||+|++|.||++... +++.||+|.+....    ...+.+.+|+.++   +.++||||+++++++.. ...|+||||
T Consensus         4 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~   83 (324)
T cd05589           4 LAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEY   83 (324)
T ss_pred             EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcC
Confidence            468999999999999964 58899999986432    2234566676655   56679999999997754 778899999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc------
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV------  187 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~------  187 (309)
                      +++++|..++..   ..+++..+..++.+++.||.||   |+.+++||||||+||+++.++.+||+|||++...      
T Consensus        84 ~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~l---H~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~  157 (324)
T cd05589          84 AAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYL---HENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDR  157 (324)
T ss_pred             CCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHH---HhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCc
Confidence            999999988864   5799999999999999999999   7889999999999999999999999999987532      


Q ss_pred             -cccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHH
Q 021659          188 -RNYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKEL  264 (309)
Q Consensus       188 -~~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  264 (309)
                       ....+++.|+|||...+  .+.++|||||||++|+|++|+.||.+...... ........       +..+...    .
T Consensus       158 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~-~~~i~~~~-------~~~p~~~----~  225 (324)
T cd05589         158 TSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEV-FDSIVNDE-------VRYPRFL----S  225 (324)
T ss_pred             ccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCC-------CCCCCCC----C
Confidence             12357889999997543  47789999999999999999999986543221 11111100       1111111    2


Q ss_pred             HHHHHHHHHccCCCCCCCC-----ChHHHHH
Q 021659          265 KKLLAVARLCIKTKDKPTI-----SIPQISR  290 (309)
Q Consensus       265 ~~l~~l~~~cl~~dp~~Rp-----s~~evl~  290 (309)
                      ..+.+++.+||+.||+.||     ++.++++
T Consensus       226 ~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~  256 (324)
T cd05589         226 REAISIMRRLLRRNPERRLGSGEKDAEDVKK  256 (324)
T ss_pred             HHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence            3455677799999999999     4566654

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=2.5e-37  Score=275.87  Aligned_cols=229  Identities=17%  Similarity=0.257  Sum_probs=178.4

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccc----cccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQAL----NLEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~----~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||+|... +++.||+|.+...    ....+.+..|..++..+ +||||+++++++.+ ...++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            36899999999999974 4789999998643    22334567788888764 89999999997654 678899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc-------cc
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-------RN  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-------~~  189 (309)
                      |+|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++...       ..
T Consensus        81 g~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~L---H~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  155 (316)
T cd05619          81 GDLMFHIQS--CHKFDLPRATFYAAEIICGLQFL---HSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCT  155 (316)
T ss_pred             CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceee
Confidence            999999976  46789999999999999999999   7889999999999999999999999999987632       12


Q ss_pred             cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          190 YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       190 ~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ..++..|+|||...  ..+.++|||||||++|+|++|+.||...... .........       .+..+.. .   ...+
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-~~~~~i~~~-------~~~~~~~-~---~~~~  223 (316)
T cd05619         156 FCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE-ELFQSIRMD-------NPCYPRW-L---TREA  223 (316)
T ss_pred             ecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhC-------CCCCCcc-C---CHHH
Confidence            35788999999643  3478999999999999999999999765322 111111110       1111111 1   2345


Q ss_pred             HHHHHHccCCCCCCCCChH-HHH
Q 021659          268 LAVARLCIKTKDKPTISIP-QIS  289 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~-evl  289 (309)
                      .+++.+||+.||++||++. +++
T Consensus       224 ~~li~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05619         224 KDILVKLFVREPERRLGVKGDIR  246 (316)
T ss_pred             HHHHHHHhccCHhhcCCChHHHH
Confidence            5666699999999999997 664

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=7.3e-37  Score=263.28  Aligned_cols=235  Identities=18%  Similarity=0.260  Sum_probs=184.7

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      +.||+|++|.||+|...++..+|+|.+.....  ....+.+|++++++++||||+++++++.. ...++||||+++++|.
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   80 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL   80 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence            36899999999999988888999998854332  23468899999999999999999998765 6678999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc--------cCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN--------YAT  192 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~--------~~~  192 (309)
                      +++... ...+++..+..++.+++.||.|+   |+.+++|+||+|+||+++.++.++++|||++.....        ...
T Consensus        81 ~~~~~~-~~~~~~~~~~~~~~~i~~~l~~l---H~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~  156 (250)
T cd05085          81 SFLRKK-KDELKTKQLVKFALDAAAGMAYL---ESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQI  156 (250)
T ss_pred             HHHHhc-CCCCCHHHHHHHHHHHHHHHHHH---HhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCC
Confidence            998653 34688999999999999999999   788999999999999999999999999998754321        122


Q ss_pred             CCCCCCCCCCCC--CCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHH
Q 021659          193 MPHSSCPEDCST--QDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLA  269 (309)
Q Consensus       193 ~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~  269 (309)
                      +..|++||....  .+.++||||||++++++++ |..||........ ..... ...     .....    ......+.+
T Consensus       157 ~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~-~~~~~-~~~-----~~~~~----~~~~~~~~~  225 (250)
T cd05085         157 PIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQA-REQVE-KGY-----RMSCP----QKCPDDVYK  225 (250)
T ss_pred             cccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHH-HHHHH-cCC-----CCCCC----CCCCHHHHH
Confidence            456999996533  4678999999999999998 9999976533211 11111 110     01111    112356677


Q ss_pred             HHHHccCCCCCCCCChHHHHHHHh
Q 021659          270 VARLCIKTKDKPTISIPQISRYLQ  293 (309)
Q Consensus       270 l~~~cl~~dp~~Rps~~evl~~L~  293 (309)
                      ++.+|+..+|++||++.|+++.|.
T Consensus       226 li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         226 VMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             HHHHHcccCcccCCCHHHHHHHhc
Confidence            788999999999999999998875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=3.1e-37  Score=266.68  Aligned_cols=237  Identities=18%  Similarity=0.261  Sum_probs=185.3

Q ss_pred             cccccCCCceEEEEEEcC--C--cEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQD--G--EVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~--~--~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~~  117 (309)
                      +.||+|++|.||+|.+.+  +  ..+|+|.+.....  ..+.+.+|++++++++||||+++++++.+...++++||++++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~   80 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLTHPLMMVTELAPLG   80 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcCCeEEEEEEecCCC
Confidence            368999999999999643  3  3589999865443  346789999999999999999999977667778999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc--------
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN--------  189 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~--------  189 (309)
                      +|.+.+.......+++..+..++.|++.||+||   |+++++|+||+|+||+++.++.+|++|||++.....        
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~l---H~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  157 (257)
T cd05040          81 SLLDRLRKDALGHFLISTLCDYAVQIANGMRYL---ESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVME  157 (257)
T ss_pred             cHHHHHHhcccccCcHHHHHHHHHHHHHHHHHH---HhCCccccccCcccEEEecCCEEEeccccccccccccccceecc
Confidence            999999764335789999999999999999999   788999999999999999999999999998865432        


Q ss_pred             --cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHH
Q 021659          190 --YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKEL  264 (309)
Q Consensus       190 --~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  264 (309)
                        ..++..|++||...  ..+.++||||||+++++|++ |+.||....... ..........  ...   ...    ...
T Consensus       158 ~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-~~~~~~~~~~--~~~---~~~----~~~  227 (257)
T cd05040         158 EHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ-ILKKIDKEGE--RLE---RPE----ACP  227 (257)
T ss_pred             cCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHhcCC--cCC---CCc----cCC
Confidence              23456799999653  35788999999999999998 999996443221 1111111000  000   001    113


Q ss_pred             HHHHHHHHHccCCCCCCCCChHHHHHHHh
Q 021659          265 KKLLAVARLCIKTKDKPTISIPQISRYLQ  293 (309)
Q Consensus       265 ~~l~~l~~~cl~~dp~~Rps~~evl~~L~  293 (309)
                      ..+.+++.+||+.+|++|||+.++++.|.
T Consensus       228 ~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         228 QDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             HHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            45667777999999999999999999885

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=3.2e-37  Score=270.27  Aligned_cols=239  Identities=17%  Similarity=0.238  Sum_probs=184.4

Q ss_pred             cccccCCCceEEEEEEc-CCc----EEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGE----VALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~----~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||+|.+. +++    .+++|.+.....  ...++..|+..+.+++||||+++++++.....++++||+++
T Consensus        13 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~~~i~e~~~~   92 (279)
T cd05111          13 KLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGASLQLVTQLSPL   92 (279)
T ss_pred             cccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCCccEEEEEeCCC
Confidence            57999999999999973 344    367777743221  22467788889999999999999999877778899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc--------
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR--------  188 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~--------  188 (309)
                      |+|.+++... ...+++..+..++.|++.||.||   |+++++|+||||+||+++.++.+||+|||++....        
T Consensus        93 gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~l---H~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~  168 (279)
T cd05111          93 GSLLDHVRQH-RDSLDPQRLLNWCVQIAKGMYYL---EEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFY  168 (279)
T ss_pred             CcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHH---HHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCccccc
Confidence            9999999652 35689999999999999999999   77899999999999999999999999999986432        


Q ss_pred             -ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHH
Q 021659          189 -NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKEL  264 (309)
Q Consensus       189 -~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  264 (309)
                       ...++..|++||...  ..+.++||||||+++||+++ |..||.+..... .. .....+.  ....+.   .+    .
T Consensus       169 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~-~~-~~~~~~~--~~~~~~---~~----~  237 (279)
T cd05111         169 SEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE-VP-DLLEKGE--RLAQPQ---IC----T  237 (279)
T ss_pred             CCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH-HH-HHHHCCC--cCCCCC---CC----C
Confidence             123446799999753  35788999999999999998 999997643211 11 1111111  011111   11    2


Q ss_pred             HHHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          265 KKLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       265 ~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                      ..+.+++.+||..||+.|||+.|+++.|..+.+
T Consensus       238 ~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~  270 (279)
T cd05111         238 IDVYMVMVKCWMIDENVRPTFKELANEFTRMAR  270 (279)
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence            345667779999999999999999999987665

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=3.4e-37  Score=281.38  Aligned_cols=234  Identities=14%  Similarity=0.155  Sum_probs=179.5

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||+++. .+++.||+|.+....    ...+.+.+|++++++++|+||+++++.+.+ ...++||||+++|
T Consensus         7 ~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g   86 (376)
T cd05598           7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGG   86 (376)
T ss_pred             EEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCCC
Confidence            6899999999999996 458899999985432    223567899999999999999999997654 7788999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---------
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---------  188 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---------  188 (309)
                      +|.+++..  ...+++..+..++.|++.||.||   |+.+|+||||||+||+++.++.+||+|||++..+.         
T Consensus        87 ~L~~~i~~--~~~~~~~~~~~~~~qi~~al~~l---H~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~  161 (376)
T cd05598          87 DMMSLLIR--LGIFEEDLARFYIAELTCAIESV---HKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQ  161 (376)
T ss_pred             cHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccccc
Confidence            99999976  56788999999999999999999   78899999999999999999999999999864211         


Q ss_pred             -----------------------------------------ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCC
Q 021659          189 -----------------------------------------NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQ  225 (309)
Q Consensus       189 -----------------------------------------~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~  225 (309)
                                                               ...||+.|+|||....  .+.++|||||||++|+|++|+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~  241 (376)
T cd05598         162 KGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQ  241 (376)
T ss_pred             cccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCC
Confidence                                                     1257889999997533  478899999999999999999


Q ss_pred             CCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCC---ChHHHHHH
Q 021659          226 SPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTI---SIPQISRY  291 (309)
Q Consensus       226 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rp---s~~evl~~  291 (309)
                      .||.+...............   ....+. ... .   ...+.+++.+|+ .+|.+|+   ++.++++.
T Consensus       242 ~Pf~~~~~~~~~~~i~~~~~---~~~~~~-~~~-~---s~~~~~li~~l~-~~p~~R~~~~t~~ell~h  301 (376)
T cd05598         242 PPFLADTPAETQLKVINWET---TLHIPS-QAK-L---SREASDLILRLC-CGAEDRLGKNGADEIKAH  301 (376)
T ss_pred             CCCCCCCHHHHHHHHhccCc---cccCCC-CCC-C---CHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence            99986543222111111000   000010 011 1   233445555765 5999999   88888844

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=3.6e-37  Score=276.28  Aligned_cols=231  Identities=18%  Similarity=0.236  Sum_probs=178.7

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||++... +++.||+|++....    ...+.+..|..++.++ +||||+++++++.+ ...|+||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            36899999999999974 57899999996432    2234578899999988 69999999997754 678899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc-------cc
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-------RN  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-------~~  189 (309)
                      ++|.+++..  ...+++..+..++.|++.||.||   |+++++||||||+||+++.++.+||+|||++...       ..
T Consensus        81 g~L~~~~~~--~~~l~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~  155 (329)
T cd05588          81 GDLMFHMQR--QRKLPEEHARFYSAEISLALNFL---HERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTST  155 (329)
T ss_pred             CCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCcccc
Confidence            999998865  46799999999999999999999   7889999999999999999999999999988632       12


Q ss_pred             cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCc-------cHHHHHHHhcccccccccccCcCCCCCC
Q 021659          190 YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDV-------DLIQWIQESSISSSIHRMIDPDLGGSYD  260 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~~~  260 (309)
                      ..++..|+|||...+  .+.++|+|||||++|+|++|+.||....       ....+.........      ..++... 
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~------~~~p~~~-  228 (329)
T cd05588         156 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ------IRIPRSL-  228 (329)
T ss_pred             ccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC------CCCCCCC-
Confidence            357889999997543  4788999999999999999999995211       11111111111110      1111112 


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCCC------hHHHH
Q 021659          261 SKELKKLLAVARLCIKTKDKPTIS------IPQIS  289 (309)
Q Consensus       261 ~~~~~~l~~l~~~cl~~dp~~Rps------~~evl  289 (309)
                         ...+.+++.+||+.||.+||+      +.+++
T Consensus       229 ---~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~  260 (329)
T cd05588         229 ---SVKASSVLKGFLNKDPKERLGCHPQTGFRDIK  260 (329)
T ss_pred             ---CHHHHHHHHHHhccCHHHcCCCCCCCCHHHHh
Confidence               234556666999999999998      56665

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5e-37  Score=269.90  Aligned_cols=234  Identities=17%  Similarity=0.240  Sum_probs=182.7

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc----cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL----EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~----~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||++.. .+++.||+|.+.....    ....+.+|+.++++++||||+++++.+.. ...++||||++++
T Consensus         6 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   85 (285)
T cd05605           6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGG   85 (285)
T ss_pred             EEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCCC
Confidence            6799999999999996 4688999999854321    22456789999999999999999997654 6788999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------ccC
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------NYA  191 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------~~~  191 (309)
                      +|.+++.......+++..+..++.|++.||.||   |+.+++|+||+|+||+++.++.++|+|||++....      ...
T Consensus        86 ~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~  162 (285)
T cd05605          86 DLKFHIYNMGNPGFDEERAVFYAAEITCGLEDL---HRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRGRV  162 (285)
T ss_pred             cHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHH---HHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcccccc
Confidence            999888654346799999999999999999999   77899999999999999999999999999986542      235


Q ss_pred             CCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHH--HHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          192 TMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQ--WIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       192 ~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ++..|++||....  .+.++||||+|+++|+|++|+.||.+......  .+.......      .....    ......+
T Consensus       163 ~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~------~~~~~----~~~~~~~  232 (285)
T cd05605         163 GTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKED------QEEYS----EKFSEAA  232 (285)
T ss_pred             CCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhc------ccccC----cccCHHH
Confidence            6789999997533  47789999999999999999999986433211  111111000      01111    1123345


Q ss_pred             HHHHHHccCCCCCCCC-----ChHHHHH
Q 021659          268 LAVARLCIKTKDKPTI-----SIPQISR  290 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rp-----s~~evl~  290 (309)
                      .+++.+||+.||++||     ++.++++
T Consensus       233 ~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05605         233 RSICRQLLTKDPGFRLGCRGEGAEEVKA  260 (285)
T ss_pred             HHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence            5677799999999999     7888864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.6e-37  Score=280.08  Aligned_cols=235  Identities=15%  Similarity=0.131  Sum_probs=179.6

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEeccccc----cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQALNL----EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~----~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      .+.||+|+||.||++.. .+++.||+|++.....    ..+.+.+|++++++++||||+++++++.+ ...|+||||+++
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~g   85 (377)
T cd05629           6 VKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPG   85 (377)
T ss_pred             eEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCC
Confidence            36899999999999986 4688999999854321    23467889999999999999999997765 678899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc--------
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR--------  188 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~--------  188 (309)
                      |+|.+++..  ...+++..+..++.|++.||+||   |+.+++||||||+||+++.++.+||+|||++....        
T Consensus        86 g~L~~~l~~--~~~~~~~~~~~~~~ql~~aL~~L---H~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  160 (377)
T cd05629          86 GDLMTMLIK--YDTFSEDVTRFYMAECVLAIEAV---HKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYY  160 (377)
T ss_pred             CcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence            999999976  56789999999999999999999   78899999999999999999999999999885211        


Q ss_pred             ----------------------------------------------ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHH
Q 021659          189 ----------------------------------------------NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILE  220 (309)
Q Consensus       189 ----------------------------------------------~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~  220 (309)
                                                                    ...+|+.|+|||...  ..+.++|||||||++||
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e  240 (377)
T cd05629         161 QKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFE  240 (377)
T ss_pred             cccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhh
Confidence                                                          124788999999743  35789999999999999


Q ss_pred             HHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCC---CCChHHHHHH
Q 021659          221 LVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKP---TISIPQISRY  291 (309)
Q Consensus       221 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~---Rps~~evl~~  291 (309)
                      |++|..||.............. ......+  |.  ....+   ..+.+++.+|+. +|.+   |+++.|++..
T Consensus       241 lltG~~Pf~~~~~~~~~~~i~~-~~~~~~~--p~--~~~~s---~~~~dli~~lL~-~~~~r~~r~~~~~~l~h  305 (377)
T cd05629         241 CLIGWPPFCSENSHETYRKIIN-WRETLYF--PD--DIHLS---VEAEDLIRRLIT-NAENRLGRGGAHEIKSH  305 (377)
T ss_pred             hhcCCCCCCCCCHHHHHHHHHc-cCCccCC--CC--CCCCC---HHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence            9999999976543222111111 0000000  10  00112   334455559997 6665   4699998864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=6.8e-37  Score=278.60  Aligned_cols=234  Identities=13%  Similarity=0.178  Sum_probs=180.0

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||++... +++.+|+|.+....    ...+.+.+|+.+++.++||||+++++++.+ ...|+||||+++|
T Consensus        49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg  128 (370)
T cd05621          49 KVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGG  128 (370)
T ss_pred             EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCCCC
Confidence            57999999999999974 57899999985322    223457889999999999999999997654 6788999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc--------c
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR--------N  189 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~--------~  189 (309)
                      +|.+++..   ..+++..+..++.|++.||.||   |+.+|+||||||+||+++.++.+||+|||++....        .
T Consensus       129 ~L~~~l~~---~~~~~~~~~~~~~qil~aL~~L---H~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~~~  202 (370)
T cd05621         129 DLVNLMSN---YDVPEKWAKFYTAEVVLALDAI---HSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDT  202 (370)
T ss_pred             cHHHHHHh---cCCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCceeccc
Confidence            99999964   4688999999999999999999   78899999999999999999999999999986542        2


Q ss_pred             cCCCCCCCCCCCCCC------CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHH
Q 021659          190 YATMPHSSCPEDCST------QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKE  263 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~------~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  263 (309)
                      ..+|+.|+|||....      .+.++|+|||||++|+|++|+.||........... .......     ...+..  ...
T Consensus       203 ~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~-i~~~~~~-----~~~p~~--~~~  274 (370)
T cd05621         203 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSK-IMDHKNS-----LNFPED--VEI  274 (370)
T ss_pred             CCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHH-HHhCCcc-----cCCCCc--ccC
Confidence            357899999996432      46789999999999999999999986543222211 1111100     011111  111


Q ss_pred             HHHHHHHHHHccCCCCCC--CCChHHHHHH
Q 021659          264 LKKLLAVARLCIKTKDKP--TISIPQISRY  291 (309)
Q Consensus       264 ~~~l~~l~~~cl~~dp~~--Rps~~evl~~  291 (309)
                      ...+.+++..||..++.+  |+++.|+++.
T Consensus       275 s~~~~~li~~~L~~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         275 SKHAKNLICAFLTDREVRLGRNGVEEIKQH  304 (370)
T ss_pred             CHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence            234445556888766544  8999998865

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=1.1e-36  Score=264.58  Aligned_cols=241  Identities=19%  Similarity=0.250  Sum_probs=188.1

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCC
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIEN  116 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~  116 (309)
                      .+.||+|+||.||+|+. .+++.||+|.+....    .....+.+|++++++++||||+++++++. ....++++||+++
T Consensus         7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~   86 (267)
T cd08228           7 EKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADA   86 (267)
T ss_pred             eeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecCC
Confidence            36899999999999996 468899999874322    12346889999999999999999999665 4677899999999


Q ss_pred             CCHHHhhcCC--CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------
Q 021659          117 GSLKEHLNDP--LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------  188 (309)
Q Consensus       117 ~sL~~~i~~~--~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------  188 (309)
                      ++|.+++...  ....+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++.++++|||++....      
T Consensus        87 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~L---H~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~~  163 (267)
T cd08228          87 GDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHM---HSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA  163 (267)
T ss_pred             CcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHH---hhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhHHH
Confidence            9999888531  235688999999999999999999   78899999999999999999999999999876543      


Q ss_pred             -ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCcc-HHHHHHHhcccccccccccCcCCCCCCHHHH
Q 021659          189 -NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVD-LIQWIQESSISSSIHRMIDPDLGGSYDSKEL  264 (309)
Q Consensus       189 -~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  264 (309)
                       ...++..|++||...  ..+.++|+||||+++++|++|+.||..... .......... ..     .+...   .....
T Consensus       164 ~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~-~~-----~~~~~---~~~~~  234 (267)
T cd08228         164 HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQ-CD-----YPPLP---TEHYS  234 (267)
T ss_pred             hcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhc-CC-----CCCCC---hhhcC
Confidence             235677899999753  346789999999999999999999865432 2222221111 01     11111   11223


Q ss_pred             HHHHHHHHHccCCCCCCCCChHHHHHHHhhh
Q 021659          265 KKLLAVARLCIKTKDKPTISIPQISRYLQNE  295 (309)
Q Consensus       265 ~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~  295 (309)
                      ..+.+++.+||..+|++||++.++++.|+++
T Consensus       235 ~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~  265 (267)
T cd08228         235 EKLRELVSMCIYPDPDQRPDIGYVHQIAKQM  265 (267)
T ss_pred             HHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence            4566777799999999999999999999865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=2.9e-37  Score=276.22  Aligned_cols=226  Identities=20%  Similarity=0.242  Sum_probs=175.1

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHH-HHccCCCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQ-LLGRLHHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~-~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||+++.. +++.||+|.+....    .....+..|.. +++.++||||+++++.+.+ ...++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            36899999999999974 68899999985432    12234555554 5678899999999996654 678899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------c
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------N  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~  189 (309)
                      ++|..++..  ...+++..+..++.|++.||.||   |+++++||||||+||+++.++.+||+|||++....       .
T Consensus        81 g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~l---H~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~  155 (323)
T cd05575          81 GELFFHLQR--ERSFPEPRARFYAAEIASALGYL---HSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTST  155 (323)
T ss_pred             CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCcccc
Confidence            999999876  56789999999999999999999   78899999999999999999999999999876421       2


Q ss_pred             cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          190 YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ..+++.|+|||...+  .+.++|||||||++|+|++|+.||..... .+....... ..      ..+....    ...+
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-~~~~~~i~~-~~------~~~~~~~----~~~~  223 (323)
T cd05575         156 FCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT-AEMYDNILN-KP------LRLKPNI----SVSA  223 (323)
T ss_pred             ccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH-HHHHHHHHc-CC------CCCCCCC----CHHH
Confidence            347889999997543  47889999999999999999999976432 121111111 00      1111111    2345


Q ss_pred             HHHHHHccCCCCCCCCChH
Q 021659          268 LAVARLCIKTKDKPTISIP  286 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~  286 (309)
                      .+++.+||+.||++||++.
T Consensus       224 ~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         224 RHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             HHHHHHHhhcCHHhCCCCC
Confidence            5666699999999999985

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=3.3e-37  Score=269.97  Aligned_cols=239  Identities=13%  Similarity=0.178  Sum_probs=186.9

Q ss_pred             cccccCCCceEEEEEE-cCCc----EEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGE----VALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~----~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||+|.+ .++.    .||+|.+....  ...+.+.+|+.+++.++|+||+++++++.....+++++|+++
T Consensus        13 ~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~l~~~~~~~   92 (279)
T cd05109          13 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTSTVQLVTQLMPY   92 (279)
T ss_pred             eecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCcEEEEEcCCC
Confidence            6899999999999985 3343    47999885332  224578899999999999999999999887778899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------  189 (309)
                      |+|.+.+... ...+++..+..++.|++.||.||   |+++++|+||||+||+++.++.+||+|||++.....       
T Consensus        93 g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~l---H~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~  168 (279)
T cd05109          93 GCLLDYVREN-KDRIGSQDLLNWCVQIAKGMSYL---EEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHA  168 (279)
T ss_pred             CCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccccccceEEEcCCCcEEECCCCceeecccccceeec
Confidence            9999998652 35689999999999999999999   788999999999999999999999999999875431       


Q ss_pred             --cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccH--HHHHHHhcccccccccccCcCCCCCCHH
Q 021659          190 --YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDL--IQWIQESSISSSIHRMIDPDLGGSYDSK  262 (309)
Q Consensus       190 --~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~  262 (309)
                        ..++..|++||...  ..+.++|||||||++|||++ |..||......  ...+..    ...     +....    .
T Consensus       169 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~----~~~-----~~~~~----~  235 (279)
T cd05109         169 DGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEK----GER-----LPQPP----I  235 (279)
T ss_pred             CCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC----CCc-----CCCCc----c
Confidence              12345799999643  34788999999999999998 89998754321  111111    100     01111    1


Q ss_pred             HHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccc
Q 021659          263 ELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQ  299 (309)
Q Consensus       263 ~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~  299 (309)
                      ....+.+++.+||+.||+.||++.++++.|+++....
T Consensus       236 ~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~  272 (279)
T cd05109         236 CTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP  272 (279)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence            2345667777999999999999999999998765443

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=1.5e-36  Score=263.56  Aligned_cols=242  Identities=19%  Similarity=0.275  Sum_probs=189.4

Q ss_pred             cccccccCCCceEEEEEEc-CCcEEEEEEeccc----cccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCC
Q 021659           42 FHRIVYTNSHGAAYKARFQ-DGEVALVKEIQAL----NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIE  115 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~----~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~  115 (309)
                      +.+.||+|++|.||+|... ++..|++|.+...    ....+.+.+|++++++++|+|++++++++.. ...+++|||++
T Consensus         6 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   85 (267)
T cd08224           6 IEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELAD   85 (267)
T ss_pred             eeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCC
Confidence            3468999999999999975 7889999988532    1224578899999999999999999996654 67789999999


Q ss_pred             CCCHHHhhcC--CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc----
Q 021659          116 NGSLKEHLND--PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN----  189 (309)
Q Consensus       116 ~~sL~~~i~~--~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~----  189 (309)
                      +++|.+++..  .....+++..+..++.++++||.+|   |+.+++|+||+|+||+++.++.++++|||++.....    
T Consensus        86 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---h~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~  162 (267)
T cd08224          86 AGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHM---HSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA  162 (267)
T ss_pred             CCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHH---HhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCcc
Confidence            9999998854  2245689999999999999999999   788999999999999999999999999998764432    


Q ss_pred             ---cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCc-cHHHHHHHhcccccccccccCcCCCCCCHHH
Q 021659          190 ---YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDV-DLIQWIQESSISSSIHRMIDPDLGGSYDSKE  263 (309)
Q Consensus       190 ---~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  263 (309)
                         ..++..|.+||...+  .+.++|+||||+++++|++|+.||.... ......... ..+..     +..+   ....
T Consensus       163 ~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~-----~~~~---~~~~  233 (267)
T cd08224         163 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI-EKCDY-----PPLP---ADHY  233 (267)
T ss_pred             cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhh-hcCCC-----CCCC---hhhc
Confidence               346678999996533  4678999999999999999999996543 222222111 11111     1111   1122


Q ss_pred             HHHHHHHHHHccCCCCCCCCChHHHHHHHhhh
Q 021659          264 LKKLLAVARLCIKTKDKPTISIPQISRYLQNE  295 (309)
Q Consensus       264 ~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~  295 (309)
                      ...+.+++.+||..+|++|||+.+|++.|+++
T Consensus       234 ~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~  265 (267)
T cd08224         234 SEELRDLVSRCINPDPEKRPDISYVLQVAKEM  265 (267)
T ss_pred             CHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence            34566777799999999999999999999865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=7.8e-37  Score=279.61  Aligned_cols=233  Identities=15%  Similarity=0.157  Sum_probs=177.5

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc----cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL----EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~----~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||+|.. .+++.||+|.+.....    ..+.+.+|++++++++|+||+++++.+.+ ...++||||+++|
T Consensus         7 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg   86 (382)
T cd05625           7 KTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGG   86 (382)
T ss_pred             EEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCCC
Confidence            6899999999999996 4578999999854321    23467899999999999999999997654 6788999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---------
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---------  188 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---------  188 (309)
                      +|.+++..  ...+++..+..++.|++.||.||   |+.+|+||||||+|||++.++.+||+|||++....         
T Consensus        87 ~L~~~l~~--~~~~~e~~~~~~~~qi~~al~~l---H~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~  161 (382)
T cd05625          87 DMMSLLIR--MGIFPEDLARFYIAELTCAVESV---HKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQ  161 (382)
T ss_pred             cHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccccc
Confidence            99999876  46788999999999999999999   78899999999999999999999999999864210         


Q ss_pred             ---------------------------------------------ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHH
Q 021659          189 ---------------------------------------------NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILEL  221 (309)
Q Consensus       189 ---------------------------------------------~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l  221 (309)
                                                                   ...+|+.|+|||...  ..+.++|||||||++|||
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~el  241 (382)
T cd05625         162 SGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM  241 (382)
T ss_pred             cccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHH
Confidence                                                         124788899999643  457899999999999999


Q ss_pred             HhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCC---hHHHHH
Q 021659          222 VTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTIS---IPQISR  290 (309)
Q Consensus       222 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps---~~evl~  290 (309)
                      ++|+.||..................   ...|.  ....+.   ...+++.+++ .+|++|++   +.++++
T Consensus       242 ltG~~Pf~~~~~~~~~~~i~~~~~~---~~~p~--~~~~s~---~~~~li~~l~-~~p~~R~~~~~~~ei~~  304 (382)
T cd05625         242 LVGQPPFLAQTPLETQMKVINWQTS---LHIPP--QAKLSP---EASDLIIKLC-RGPEDRLGKNGADEIKA  304 (382)
T ss_pred             HhCCCCCCCCCHHHHHHHHHccCCC---cCCCC--cccCCH---HHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence            9999999865433222211110000   00010  111122   3334444655 48999997   777764

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=3.5e-37  Score=275.46  Aligned_cols=227  Identities=15%  Similarity=0.150  Sum_probs=181.7

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccccc----HHHHHHHHHHHccCCCCCcceEeeeE-eCCeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLE----KDAFYREIQLLGRLHHRHLLALQGFS-TGRKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~----~~~~~~ei~~l~~l~h~niv~~~~~~-~~~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||+|+.+ +|.++|+|++.++...    .+.+..|-.+|....+|+||+++-.+ +....||||||++||
T Consensus       147 k~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPGG  226 (550)
T KOG0605|consen  147 KVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPGG  226 (550)
T ss_pred             eeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCCc
Confidence            47999999999999964 5899999999765543    34678899999999999999998855 458899999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---------
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---------  188 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---------  188 (309)
                      ++..++..  ...|++..+..++.+++-||..+   |+.|+|||||||+|+|||..|++||+|||++....         
T Consensus       227 D~mTLL~~--~~~L~e~~arfYiaE~vlAI~~i---H~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~  301 (550)
T KOG0605|consen  227 DMMTLLMR--KDTLTEDWARFYIAETVLAIESI---HQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYR  301 (550)
T ss_pred             cHHHHHHh--cCcCchHHHHHHHHHHHHHHHHH---HHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhc
Confidence            99999987  78999999999999999999999   89999999999999999999999999999973110         


Q ss_pred             ---------------------------------------------ccCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHH
Q 021659          189 ---------------------------------------------NYATMPHSSCPEDC--STQDCSNIIFQLGVLILEL  221 (309)
Q Consensus       189 ---------------------------------------------~~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l  221 (309)
                                                                   ..+|||.|+|||..  .+++..+|-||||||+|||
T Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEm  381 (550)
T KOG0605|consen  302 LDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEM  381 (550)
T ss_pred             chhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHH
Confidence                                                         12689999999964  4468899999999999999


Q ss_pred             HhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCC
Q 021659          222 VTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTIS  284 (309)
Q Consensus       222 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps  284 (309)
                      +.|.+||.++.....+-....-..        .+..........+..++|.+|+. ||+.|..
T Consensus       382 LvGyPPF~s~tp~~T~rkI~nwr~--------~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG  435 (550)
T KOG0605|consen  382 LVGYPPFCSETPQETYRKIVNWRE--------TLKFPEEVDLSDEAKDLITRLLC-DPENRLG  435 (550)
T ss_pred             HhCCCCCCCCCHHHHHHHHHHHhh--------hccCCCcCcccHHHHHHHHHHhc-CHHHhcC
Confidence            999999998765544433221110        01111111112344456669998 9999986

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=2.9e-37  Score=276.49  Aligned_cols=229  Identities=20%  Similarity=0.219  Sum_probs=175.0

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHH-HHHccCCCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREI-QLLGRLHHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei-~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||+++.. +++.||+|.+....    .....+..|. .+++.++||||+++++.+.. ...++||||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            35899999999999974 57889999985432    1223444444 45678899999999997654 678899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------c
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------N  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~  189 (309)
                      ++|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....       .
T Consensus        81 ~~L~~~~~~--~~~~~~~~~~~~~~qi~~~L~~l---H~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~  155 (325)
T cd05602          81 GELFYHLQR--ERCFLEPRARFYAAEIASALGYL---HSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTST  155 (325)
T ss_pred             CcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCccc
Confidence            999999976  56788899999999999999999   78899999999999999999999999999986421       2


Q ss_pred             cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          190 YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ..+++.|+|||...+  .+.++|||||||++|+|++|+.||.................    ...+.     .   ...+
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~----~~~~~-----~---~~~~  223 (325)
T cd05602         156 FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL----QLKPN-----I---TNSA  223 (325)
T ss_pred             ccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCc----CCCCC-----C---CHHH
Confidence            357889999996443  46889999999999999999999976543221111111100    01111     1   2344


Q ss_pred             HHHHHHccCCCCCCCCChHHHH
Q 021659          268 LAVARLCIKTKDKPTISIPQIS  289 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~evl  289 (309)
                      .+++.+||+.||.+||++.+.+
T Consensus       224 ~~li~~~l~~~p~~R~~~~~~~  245 (325)
T cd05602         224 RHLLEGLLQKDRTKRLGAKDDF  245 (325)
T ss_pred             HHHHHHHcccCHHHCCCCCCCH
Confidence            5566699999999999987543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=1.6e-36  Score=262.04  Aligned_cols=236  Identities=20%  Similarity=0.312  Sum_probs=188.0

Q ss_pred             cccccCCCceEEEEEEcC----CcEEEEEEecccccc--HHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQD----GEVALVKEIQALNLE--KDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~----~~~va~K~~~~~~~~--~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||++....    +..+++|.+......  .+.+.+|++.++.++|+|++++++++.. ...+++|||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            368999999999999743    788999998654433  5688999999999999999999997765 667899999999


Q ss_pred             CCHHHhhcCCC-------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc
Q 021659          117 GSLKEHLNDPL-------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN  189 (309)
Q Consensus       117 ~sL~~~i~~~~-------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~  189 (309)
                      ++|.+++....       ...+++..+..++.+++.||.+|   |+++++|+||+|+||+++.++.++++|||.+.....
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~l---H~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  157 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYL---ASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD  157 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHH---HcCCcccCccCcceEEECCCCcEEEccccccccccc
Confidence            99999997631       36799999999999999999999   789999999999999999999999999999865543


Q ss_pred             ---------cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCC
Q 021659          190 ---------YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGG  257 (309)
Q Consensus       190 ---------~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  257 (309)
                               ..++..|.+||...  ..+.++||||||+++++|++ |..||..... ......... ..     ......
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-~~~~~~~~~-~~-----~~~~~~  230 (262)
T cd00192         158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN-EEVLEYLRK-GY-----RLPKPE  230 (262)
T ss_pred             ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH-HHHHHHHHc-CC-----CCCCCc
Confidence                     23567899999643  34788999999999999999 6999876532 222221111 10     011111


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHh
Q 021659          258 SYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQ  293 (309)
Q Consensus       258 ~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~  293 (309)
                          .....+.+++.+||+.+|++|||+.++++.|+
T Consensus       231 ----~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         231 ----YCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             ----cCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence                11346667777999999999999999999874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=8.1e-37  Score=270.09  Aligned_cols=250  Identities=18%  Similarity=0.271  Sum_probs=189.2

Q ss_pred             cccccccCCCceEEEEEEcC-C--cEEEEEEeccc--cccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEeeC
Q 021659           42 FHRIVYTNSHGAAYKARFQD-G--EVALVKEIQAL--NLEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFDNI  114 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~-~--~~va~K~~~~~--~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e~~  114 (309)
                      +.+.||+|+||.||+|...+ +  ..+++|.+...  ....+.+.+|++++.++ +||||+++++++.. ...++++||+
T Consensus         6 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~   85 (297)
T cd05089           6 FEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYA   85 (297)
T ss_pred             eeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEec
Confidence            34689999999999998743 3  24678877532  22345788999999999 79999999997765 5678999999


Q ss_pred             CCCCHHHhhcCCC--------------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEec
Q 021659          115 ENGSLKEHLNDPL--------------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSD  180 (309)
Q Consensus       115 ~~~sL~~~i~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~d  180 (309)
                      ++++|.+++....              ...+++..+..++.|++.||+||   |+.+++|+||||+||+++.++.+||+|
T Consensus        86 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~l---H~~~ivH~dlkp~Nill~~~~~~kl~d  162 (297)
T cd05089          86 PYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYL---SEKQFIHRDLAARNVLVGENLASKIAD  162 (297)
T ss_pred             CCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCcCCcceEEECCCCeEEECC
Confidence            9999999985421              13588899999999999999999   778999999999999999999999999


Q ss_pred             ccccccccc------cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccc
Q 021659          181 VGFFNSVRN------YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMI  251 (309)
Q Consensus       181 fg~~~~~~~------~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~  251 (309)
                      ||++.....      ...+..|++||....  .+.++||||||+++|+|++ |..||...... ........ .     .
T Consensus       163 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~-~~~~~~~~-~-----~  235 (297)
T cd05089         163 FGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA-ELYEKLPQ-G-----Y  235 (297)
T ss_pred             cCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHhc-C-----C
Confidence            998753321      112346999997533  4788999999999999997 99999754322 11111111 1     0


Q ss_pred             cCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccccccccc
Q 021659          252 DPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCYKYSR  305 (309)
Q Consensus       252 ~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~~~~~~  305 (309)
                      .+.....    ....+.+++.+||+.+|.+|||+.++++.|+++++....+...
T Consensus       236 ~~~~~~~----~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~~~~~  285 (297)
T cd05089         236 RMEKPRN----CDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKAYVNM  285 (297)
T ss_pred             CCCCCCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcccccc
Confidence            1111111    1245567777999999999999999999999988876555433

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=7e-37  Score=269.70  Aligned_cols=239  Identities=18%  Similarity=0.260  Sum_probs=185.5

Q ss_pred             cccccCCCceEEEEEEc------CCcEEEEEEeccccc--cHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEee
Q 021659           44 RIVYTNSHGAAYKARFQ------DGEVALVKEIQALNL--EKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~------~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      +.||+|++|.||++...      +...+|+|.+.....  ....+.+|+++++++ +|+||+++++++.. ...+++|||
T Consensus        18 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e~   97 (293)
T cd05053          18 KPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEY   97 (293)
T ss_pred             eEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEEe
Confidence            58999999999999863      236789998864332  234688999999999 79999999997765 667899999


Q ss_pred             CCCCCHHHhhcC--------------CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEe
Q 021659          114 IENGSLKEHLND--------------PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLS  179 (309)
Q Consensus       114 ~~~~sL~~~i~~--------------~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~  179 (309)
                      +++++|.+++..              .....+++..+..++.|++.||.||   |+.+++|+||+|+||+++.++.+|++
T Consensus        98 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~L---H~~~ivH~dlkp~Nil~~~~~~~kL~  174 (293)
T cd05053          98 AAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFL---ASKKCIHRDLAARNVLVTEDHVMKIA  174 (293)
T ss_pred             CCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHH---HHCCccccccceeeEEEcCCCeEEeC
Confidence            999999999853              1245688999999999999999999   78899999999999999999999999


Q ss_pred             cccccccccc---------cCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccc
Q 021659          180 DVGFFNSVRN---------YATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSI  247 (309)
Q Consensus       180 dfg~~~~~~~---------~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~  247 (309)
                      |||++.....         ..++..|++||..  ...+.++|||||||++|++++ |..||...... +......... .
T Consensus       175 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-~~~~~~~~~~-~  252 (293)
T cd05053         175 DFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE-ELFKLLKEGY-R  252 (293)
T ss_pred             ccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH-HHHHHHHcCC-c
Confidence            9999864421         1234579999964  335788999999999999997 99998754321 1111111111 0


Q ss_pred             cccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhh
Q 021659          248 HRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEV  296 (309)
Q Consensus       248 ~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~  296 (309)
                           +..    +......+.+++.+||..||++|||+.|+++.|++.+
T Consensus       253 -----~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         253 -----MEK----PQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             -----CCC----CCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence                 011    1112345667888999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=4.9e-37  Score=275.43  Aligned_cols=227  Identities=18%  Similarity=0.255  Sum_probs=175.1

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccC-CCCCcceEeeeEe-CCeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRL-HHRHLLALQGFST-GRKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l-~h~niv~~~~~~~-~~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||++... +++.+|+|.+....    ...+.+..|+.++.++ +||||+++++++. +...++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            36899999999999974 57899999986432    2234577888888777 7999999999665 4778899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc-------cc
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-------RN  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-------~~  189 (309)
                      ++|..++..  ...+++..+..++.+++.||.||   |+.+++||||||+||+++.++.+||+|||++...       ..
T Consensus        81 ~~L~~~~~~--~~~l~~~~~~~i~~qi~~~l~~l---H~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~  155 (329)
T cd05618          81 GDLMFHMQR--QRKLPEEHARFYSAEISLALNYL---HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST  155 (329)
T ss_pred             CCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCcccc
Confidence            999998876  56799999999999999999999   7889999999999999999999999999988642       12


Q ss_pred             cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCC-------ccHHHHHHHhcccccccccccCcCCCCCC
Q 021659          190 YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGD-------VDLIQWIQESSISSSIHRMIDPDLGGSYD  260 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  260 (309)
                      ..++..|+|||...+  .+.++||||||+++|+|++|+.||...       .....+.........      ..++... 
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~------~~~p~~~-  228 (329)
T cd05618         156 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ------IRIPRSL-  228 (329)
T ss_pred             ccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC------CCCCCCC-
Confidence            357889999997543  477899999999999999999999521       011111111111110      1111111 


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCCCh
Q 021659          261 SKELKKLLAVARLCIKTKDKPTISI  285 (309)
Q Consensus       261 ~~~~~~l~~l~~~cl~~dp~~Rps~  285 (309)
                         ...+.+++.+||+.||++||++
T Consensus       229 ---~~~~~~ll~~~L~~dP~~R~~~  250 (329)
T cd05618         229 ---SVKAASVLKSFLNKDPKERLGC  250 (329)
T ss_pred             ---CHHHHHHHHHHhcCCHHHcCCC
Confidence               2345566669999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=5.2e-37  Score=265.24  Aligned_cols=238  Identities=17%  Similarity=0.261  Sum_probs=189.1

Q ss_pred             cccccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCHH
Q 021659           42 FHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLK  120 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL~  120 (309)
                      +.+.||.|++|.||++... ++.|++|.+.......+++.+|+.++++++|+||+++++++. ....++||||+++++|.
T Consensus        10 ~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~   88 (256)
T cd05039          10 LGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLV   88 (256)
T ss_pred             ceeeeecCCCceEEEEEec-CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHH
Confidence            3468999999999999874 788999999655545678999999999999999999999776 46778999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccccc----CCCCCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNY----ATMPHS  196 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~  196 (309)
                      +++.......+++..+..++.|++.||.||   |+.+++|+||+|+||+++.++.++|+|||.+......    ..+..|
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---h~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~  165 (256)
T cd05039          89 DYLRSRGRAVITLAQQLGFALDVCEGMEYL---EEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKW  165 (256)
T ss_pred             HHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCccchhcccceEEEeCCCCEEEcccccccccccccccCCCcccc
Confidence            999764445799999999999999999999   7889999999999999999999999999988754321    234568


Q ss_pred             CCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHH
Q 021659          197 SCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARL  273 (309)
Q Consensus       197 ~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~  273 (309)
                      .+||...  ..+.++|+||||++++++++ |..||...... ........ ..     .+.....    ....+.+++.+
T Consensus       166 ~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-~~~~~~~~-~~-----~~~~~~~----~~~~~~~li~~  234 (256)
T cd05039         166 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-DVVPHVEK-GY-----RMEAPEG----CPPEVYKVMKD  234 (256)
T ss_pred             cCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH-HHHHHHhc-CC-----CCCCccC----CCHHHHHHHHH
Confidence            9999653  34678999999999999997 99998754321 11111111 10     0111111    13456677779


Q ss_pred             ccCCCCCCCCChHHHHHHHhh
Q 021659          274 CIKTKDKPTISIPQISRYLQN  294 (309)
Q Consensus       274 cl~~dp~~Rps~~evl~~L~~  294 (309)
                      ||..+|++|||+.++++.|++
T Consensus       235 ~l~~~p~~Rp~~~~l~~~l~~  255 (256)
T cd05039         235 CWELDPAKRPTFKQLREQLAL  255 (256)
T ss_pred             HhccChhhCcCHHHHHHHHhc
Confidence            999999999999999999975

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=5.1e-37  Score=265.38  Aligned_cols=237  Identities=19%  Similarity=0.265  Sum_probs=186.0

Q ss_pred             cccccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEe--CCeeEEEEeeCCCCCH
Q 021659           42 FHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFST--GRKRLLVFDNIENGSL  119 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~--~~~~~lv~e~~~~~sL  119 (309)
                      +.+.||+|++|.||++... +..+++|...... ..+.+.+|+.++++++|+|++++++++.  +...++++||+++++|
T Consensus        10 ~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L   87 (256)
T cd05082          10 LLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL   87 (256)
T ss_pred             eeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc-hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcH
Confidence            4478999999999999874 6778999885433 3567899999999999999999999653  3567899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc----cCCCCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN----YATMPH  195 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~----~~~~~~  195 (309)
                      .+++.......+++..+..++.+++.||++|   |+.+++|+||+|+||+++.++.+|++|||++.....    ...+..
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  164 (256)
T cd05082          88 VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL---EANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK  164 (256)
T ss_pred             HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCEeccccchheEEEcCCCcEEecCCccceeccccCCCCcccee
Confidence            9999765455689999999999999999999   788999999999999999999999999999865432    223457


Q ss_pred             CCCCCCCCC--CCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHH
Q 021659          196 SSCPEDCST--QDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVAR  272 (309)
Q Consensus       196 ~~~PE~~~~--~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~  272 (309)
                      |++||....  .+.++||||||+++|+|++ |+.||.... ........... .     .+....    .....+.+++.
T Consensus       165 y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~-~~~~~~~~~~~-~-----~~~~~~----~~~~~~~~li~  233 (256)
T cd05082         165 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-LKDVVPRVEKG-Y-----KMDAPD----GCPPVVYDVMK  233 (256)
T ss_pred             ecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHhcC-C-----CCCCCC----CCCHHHHHHHH
Confidence            999996543  4678999999999999997 999986432 22222111111 0     011111    11345667777


Q ss_pred             HccCCCCCCCCChHHHHHHHhh
Q 021659          273 LCIKTKDKPTISIPQISRYLQN  294 (309)
Q Consensus       273 ~cl~~dp~~Rps~~evl~~L~~  294 (309)
                      +||+.+|++|||+.++++.|++
T Consensus       234 ~~l~~~p~~Rpt~~~l~~~l~~  255 (256)
T cd05082         234 QCWHLDAATRPSFLQLREQLEH  255 (256)
T ss_pred             HHhcCChhhCcCHHHHHHHHhc
Confidence            9999999999999999999875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=1.5e-36  Score=262.08  Aligned_cols=236  Identities=20%  Similarity=0.252  Sum_probs=187.4

Q ss_pred             cccccccCCCceEEEEEEc-CCcEEEEEEeccc---cccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           42 FHRIVYTNSHGAAYKARFQ-DGEVALVKEIQAL---NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~---~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      +.+.||+|++|.||++... ++..|++|.+...   ....+.+.+|++++++++||||+++++++.. ...++|+||+++
T Consensus         4 ~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd08529           4 ILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAEN   83 (256)
T ss_pred             EeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCC
Confidence            3468999999999999974 5889999988543   2334678899999999999999999997654 678899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------  189 (309)
                      ++|.+++.......+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++.++++|||++.....       
T Consensus        84 ~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~l---H~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~  160 (256)
T cd08529          84 GDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHL---HSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT  160 (256)
T ss_pred             CcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhhc
Confidence            9999999764456789999999999999999999   778999999999999999999999999998764432       


Q ss_pred             cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          190 YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ..+++.|.+||....  .+.++|+||||+++++|++|+.||....... ...... .+..     +....    .....+
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~-~~~~-----~~~~~----~~~~~~  229 (256)
T cd08529         161 IVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA-LILKII-RGVF-----PPVSQ----MYSQQL  229 (256)
T ss_pred             cccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHH-cCCC-----CCCcc----ccCHHH
Confidence            245678999997543  4688999999999999999999997654221 111111 1111     11111    123456


Q ss_pred             HHHHHHccCCCCCCCCChHHHHHH
Q 021659          268 LAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      .+++.+||+.+|++||++.++++.
T Consensus       230 ~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         230 AQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             HHHHHHHccCCcccCcCHHHHhhC
Confidence            677779999999999999999863

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=3.4e-37  Score=270.45  Aligned_cols=238  Identities=22%  Similarity=0.335  Sum_probs=182.9

Q ss_pred             cccccccCCCceEEEEEE-----cCCcEEEEEEecccccc--HHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEee
Q 021659           42 FHRIVYTNSHGAAYKARF-----QDGEVALVKEIQALNLE--KDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~-----~~~~~va~K~~~~~~~~--~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      +.+.||+|+||.||+|..     .++..+++|.+......  .+.+.+|++++++++||||+++++++.. ...+++|||
T Consensus         9 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   88 (283)
T cd05090           9 FMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEY   88 (283)
T ss_pred             eeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEc
Confidence            457899999999999984     34578999998643322  2568899999999999999999997654 677899999


Q ss_pred             CCCCCHHHhhcCCC---------------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeE
Q 021659          114 IENGSLKEHLNDPL---------------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKL  178 (309)
Q Consensus       114 ~~~~sL~~~i~~~~---------------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl  178 (309)
                      +++++|.+++....               ...+++..+..++.+++.||.||   |+++++|+||+|+||+++.++.+|+
T Consensus        89 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~l---H~~~i~H~dlkp~nili~~~~~~kl  165 (283)
T cd05090          89 LNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYL---SSHFFVHKDLAARNILIGEQLHVKI  165 (283)
T ss_pred             CCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHH---HhcCeehhccccceEEEcCCCcEEe
Confidence            99999999985311               23578889999999999999999   7789999999999999999999999


Q ss_pred             eccccccccc---------ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhccccc
Q 021659          179 SDVGFFNSVR---------NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSS  246 (309)
Q Consensus       179 ~dfg~~~~~~---------~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~  246 (309)
                      +|||++....         ...++..|++||...  ..+.++||||||+++++|++ |..||.+.... ...... ....
T Consensus       166 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~-~~~~~~-~~~~  243 (283)
T cd05090         166 SDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ-EVIEMV-RKRQ  243 (283)
T ss_pred             ccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHH-HcCC
Confidence            9999986432         123345699999753  34789999999999999998 98998654321 111111 1111


Q ss_pred             ccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHh
Q 021659          247 IHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQ  293 (309)
Q Consensus       247 ~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~  293 (309)
                      .     .......    ...+.+++.+||+.||++||++.++++.|.
T Consensus       244 ~-----~~~~~~~----~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  281 (283)
T cd05090         244 L-----LPCSEDC----PPRMYSLMTECWQEGPSRRPRFKDIHTRLR  281 (283)
T ss_pred             c-----CCCCCCC----CHHHHHHHHHHcccCcccCcCHHHHHHHhh
Confidence            0     0111111    234566777999999999999999999886

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=3.7e-37  Score=282.47  Aligned_cols=241  Identities=16%  Similarity=0.212  Sum_probs=184.7

Q ss_pred             cccccCCCceEEEEEEc------CCcEEEEEEeccccc--cHHHHHHHHHHHccCC-CCCcceEeeeEeC-CeeEEEEee
Q 021659           44 RIVYTNSHGAAYKARFQ------DGEVALVKEIQALNL--EKDAFYREIQLLGRLH-HRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~------~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~-h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      +.||+|+||.||+|.+.      .+..||+|++.....  ..+.+.+|+++++++. ||||+++++++.+ ...++||||
T Consensus        43 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey  122 (400)
T cd05105          43 RILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEY  122 (400)
T ss_pred             heecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEEe
Confidence            68999999999999852      134699999854322  2457899999999996 9999999998865 678899999


Q ss_pred             CCCCCHHHhhcCCC------------------------------------------------------------------
Q 021659          114 IENGSLKEHLNDPL------------------------------------------------------------------  127 (309)
Q Consensus       114 ~~~~sL~~~i~~~~------------------------------------------------------------------  127 (309)
                      +++|+|.+++....                                                                  
T Consensus       123 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (400)
T cd05105         123 CFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSD  202 (400)
T ss_pred             cCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhhhh
Confidence            99999998874310                                                                  


Q ss_pred             ----------------------------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEe
Q 021659          128 ----------------------------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLS  179 (309)
Q Consensus       128 ----------------------------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~  179 (309)
                                                  ...+++..+..++.|++.||.||   |+.+++|+||||+||+++.++.+||+
T Consensus       203 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~L---H~~~ivH~dikp~Nill~~~~~~kL~  279 (400)
T cd05105         203 IQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFL---ASKNCVHRDLAARNVLLAQGKIVKIC  279 (400)
T ss_pred             cccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCChHhEEEeCCCEEEEE
Confidence                                        13477888999999999999999   77899999999999999999999999


Q ss_pred             cccccccccc---------cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccc
Q 021659          180 DVGFFNSVRN---------YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSI  247 (309)
Q Consensus       180 dfg~~~~~~~---------~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~  247 (309)
                      |||++.....         ..++..|++||...+  .++++||||||+++++|++ |..||.............. .+. 
T Consensus       280 DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~-~~~-  357 (400)
T cd05105         280 DFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIK-SGY-  357 (400)
T ss_pred             eCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHh-cCC-
Confidence            9999864321         234567999996533  4789999999999999997 9999875422111111111 110 


Q ss_pred             cccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          248 HRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       248 ~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                          .+...    ......+.+++.+||+.||+.||++.+|.+.|+.++.
T Consensus       358 ----~~~~~----~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~  399 (400)
T cd05105         358 ----RMAKP----DHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP  399 (400)
T ss_pred             ----CCCCC----ccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence                01111    1123456777889999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=3e-36  Score=262.52  Aligned_cols=240  Identities=19%  Similarity=0.266  Sum_probs=185.1

Q ss_pred             cccccccCCCceEEEEEEcC----CcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC-C------ee
Q 021659           42 FHRIVYTNSHGAAYKARFQD----GEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG-R------KR  107 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~----~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~------~~  107 (309)
                      +.+.||+|+||.||+|....    +..||+|.+.....   ..+.+.+|++.++.++||||+++++++.. .      ..
T Consensus         3 ~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   82 (273)
T cd05035           3 LGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKP   82 (273)
T ss_pred             cccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCccc
Confidence            34679999999999998632    36799999864332   23568899999999999999999997643 2      26


Q ss_pred             EEEEeeCCCCCHHHhhcCC----CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccc
Q 021659          108 LLVFDNIENGSLKEHLNDP----LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGF  183 (309)
Q Consensus       108 ~lv~e~~~~~sL~~~i~~~----~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~  183 (309)
                      ++++||+++++|..++...    ....+++..+..++.|++.||.||   |+.+++|+||||+||++++++.+||+|||+
T Consensus        83 ~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~l---H~~~i~H~dlkp~Nil~~~~~~~kl~dfg~  159 (273)
T cd05035          83 MVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYL---SNRNFIHRDLAARNCMLREDMTVCVADFGL  159 (273)
T ss_pred             EEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHH---HhCCeeccccchheEEECCCCeEEECCccc
Confidence            8999999999999988432    235689999999999999999999   778999999999999999999999999999


Q ss_pred             cccccc---------cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccc
Q 021659          184 FNSVRN---------YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMI  251 (309)
Q Consensus       184 ~~~~~~---------~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~  251 (309)
                      +.....         ...+..|.+||...  ..+.++||||||+++|||++ |..||.+.... +....... +..    
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~-~~~~~~~~-~~~----  233 (273)
T cd05035         160 SKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH-EIYDYLRH-GNR----  233 (273)
T ss_pred             eeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHc-CCC----
Confidence            864421         12345789999643  34789999999999999999 88998754432 22211111 110    


Q ss_pred             cCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhh
Q 021659          252 DPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNE  295 (309)
Q Consensus       252 ~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~  295 (309)
                       +....    .....+.+++.+||+.||++|||+.|+++.|+++
T Consensus       234 -~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         234 -LKQPE----DCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             -CCCCc----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence             11111    1234667777799999999999999999999865

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=1.2e-36  Score=277.25  Aligned_cols=244  Identities=15%  Similarity=0.207  Sum_probs=183.7

Q ss_pred             HHHHhhcccc--cccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-C
Q 021659           34 DIKMATDGFH--RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-R  105 (309)
Q Consensus        34 ~i~~~~~~~~--~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~  105 (309)
                      ++....++|.  +.||+|+||.||++... +++.+|+|.+....    ...+.+.+|+.+++.++||||+++++.+.+ .
T Consensus        37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~  116 (371)
T cd05622          37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR  116 (371)
T ss_pred             hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence            3444445554  58999999999999974 57899999985322    223457789999999999999999997654 6


Q ss_pred             eeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccc
Q 021659          106 KRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFN  185 (309)
Q Consensus       106 ~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~  185 (309)
                      ..++||||+++|+|.+++..   ..+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++.
T Consensus       117 ~~~lv~Ey~~gg~L~~~~~~---~~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~  190 (371)
T cd05622         117 YLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAI---HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM  190 (371)
T ss_pred             EEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHH---HHCCEEeCCCCHHHEEECCCCCEEEEeCCcee
Confidence            78899999999999999875   4588899999999999999999   78899999999999999999999999999986


Q ss_pred             ccc--------ccCCCCCCCCCCCCCC------CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccc
Q 021659          186 SVR--------NYATMPHSSCPEDCST------QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMI  251 (309)
Q Consensus       186 ~~~--------~~~~~~~~~~PE~~~~------~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~  251 (309)
                      ...        ...+|+.|+|||....      .+.++|||||||++|+|++|+.||........... .........+.
T Consensus       191 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~-i~~~~~~~~~~  269 (371)
T cd05622         191 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSK-IMNHKNSLTFP  269 (371)
T ss_pred             EcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHH-HHcCCCcccCC
Confidence            442        2357889999996432      46789999999999999999999986543322211 11111101111


Q ss_pred             cCcCCCCCCHHHHHHHHHHHHHccCCCCCC--CCChHHHHHH
Q 021659          252 DPDLGGSYDSKELKKLLAVARLCIKTKDKP--TISIPQISRY  291 (309)
Q Consensus       252 ~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~--Rps~~evl~~  291 (309)
                      ++       ......+.+++.+||..++.+  |+++.|+++.
T Consensus       270 ~~-------~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h  304 (371)
T cd05622         270 DD-------NDISKEAKNLICAFLTDREVRLGRNGVEEIKRH  304 (371)
T ss_pred             Cc-------CCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence            10       111334455666999854443  7899998864

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=7.1e-37  Score=274.66  Aligned_cols=233  Identities=19%  Similarity=0.227  Sum_probs=179.5

Q ss_pred             ccccccCCCceEEEEEE----cCCcEEEEEEecccc-----ccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEE
Q 021659           43 HRIVYTNSHGAAYKARF----QDGEVALVKEIQALN-----LEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVF  111 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~----~~~~~va~K~~~~~~-----~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~  111 (309)
                      .+.||+|+||.||+++.    .+++.||+|++....     ...+.+..|+++++++ +|+||+.+++++.. ...++||
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (332)
T cd05614           5 LKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLIL   84 (332)
T ss_pred             EEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEE
Confidence            36899999999999985    357899999985422     1234578899999999 49999999986654 6778999


Q ss_pred             eeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---
Q 021659          112 DNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---  188 (309)
Q Consensus       112 e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---  188 (309)
                      ||+++|+|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....   
T Consensus        85 e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~  159 (332)
T cd05614          85 DYVSGGEMFTHLYQ--RDNFSEDEVRFYSGEIILALEHL---HKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEE  159 (332)
T ss_pred             eCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccC
Confidence            99999999999876  56789999999999999999999   78899999999999999999999999999986431   


Q ss_pred             -----ccCCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCc--cHHHHHHHhcccccccccccCcCCCC
Q 021659          189 -----NYATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDV--DLIQWIQESSISSSIHRMIDPDLGGS  258 (309)
Q Consensus       189 -----~~~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~  258 (309)
                           ...++..|+|||...+   .+.++|||||||++|+|++|+.||....  .....+......      .++.+...
T Consensus       160 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~------~~~~~~~~  233 (332)
T cd05614         160 KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK------CDPPFPSF  233 (332)
T ss_pred             CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc------CCCCCCCC
Confidence                 2357889999997543   4678999999999999999999996421  111111111000      11112111


Q ss_pred             CCHHHHHHHHHHHHHccCCCCCCCC-----ChHHHHH
Q 021659          259 YDSKELKKLLAVARLCIKTKDKPTI-----SIPQISR  290 (309)
Q Consensus       259 ~~~~~~~~l~~l~~~cl~~dp~~Rp-----s~~evl~  290 (309)
                       .   ...+.+++.+||+.||++||     ++.++++
T Consensus       234 -~---~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~  266 (332)
T cd05614         234 -I---GPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE  266 (332)
T ss_pred             -C---CHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence             1   23445666699999999999     6667764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=4.8e-37  Score=272.28  Aligned_cols=240  Identities=15%  Similarity=0.223  Sum_probs=185.3

Q ss_pred             ccccccCCCceEEEEEE------cCCcEEEEEEeccccc--cHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEe
Q 021659           43 HRIVYTNSHGAAYKARF------QDGEVALVKEIQALNL--EKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFD  112 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~------~~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e  112 (309)
                      .+.||+|+||.||++..      ..+..+|+|.+.....  ..+.+.+|+++++++ +|+||+++++++.. ...+++||
T Consensus        40 ~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e  119 (302)
T cd05055          40 GKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITE  119 (302)
T ss_pred             cceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEEE
Confidence            46899999999999974      2345789998854322  235688999999999 79999999997764 67889999


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc---
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN---  189 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~---  189 (309)
                      |+.+++|.+++.......+++.++..++.+++.||.||   |+++++|+||+|+||+++.++.++++|||++.....   
T Consensus       120 ~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~  196 (302)
T cd05055         120 YCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSN  196 (302)
T ss_pred             cCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeehhhhccceEEEcCCCeEEECCCcccccccCCCc
Confidence            99999999999754344589999999999999999999   778999999999999999999999999999864321   


Q ss_pred             ------cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCC
Q 021659          190 ------YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYD  260 (309)
Q Consensus       190 ------~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  260 (309)
                            ..++..|++||....  .++++||||||+++++|++ |..||.............. .+.     .+... ...
T Consensus       197 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~-~~~-----~~~~~-~~~  269 (302)
T cd05055         197 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIK-EGY-----RMAQP-EHA  269 (302)
T ss_pred             eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHH-cCC-----cCCCC-CCC
Confidence                  123467999996433  4788999999999999998 9999875433221111111 110     00011 111


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhh
Q 021659          261 SKELKKLLAVARLCIKTKDKPTISIPQISRYLQNE  295 (309)
Q Consensus       261 ~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~  295 (309)
                         ...+.+++.+||.++|++|||+.|++..|+++
T Consensus       270 ---~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         270 ---PAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             ---CHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence               23566677799999999999999999999865

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=7.1e-37  Score=287.26  Aligned_cols=233  Identities=19%  Similarity=0.185  Sum_probs=180.9

Q ss_pred             cccccCCCceEEEEEEc-C-CcEEEEEEecccccc-HHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARFQ-D-GEVALVKEIQALNLE-KDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~-~~~va~K~~~~~~~~-~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL  119 (309)
                      +.||.|++|.||++... + +..|++|.+...... ...+.+|+.+++.++||||+++++++. +...|+||||+++|+|
T Consensus        73 ~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L  152 (478)
T PTZ00267         73 TLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDL  152 (478)
T ss_pred             EEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCCCH
Confidence            58999999999999853 3 567888876433322 345778999999999999999999765 4788999999999999


Q ss_pred             HHhhcCC--CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---------
Q 021659          120 KEHLNDP--LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---------  188 (309)
Q Consensus       120 ~~~i~~~--~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---------  188 (309)
                      .+++...  ...++++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....         
T Consensus       153 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~l---H~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~  229 (478)
T PTZ00267        153 NKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEV---HSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVAS  229 (478)
T ss_pred             HHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccccccc
Confidence            9887532  245789999999999999999999   77899999999999999999999999999987542         


Q ss_pred             ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          189 NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       189 ~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                      ...+|+.|+|||....  .+.++|||||||++|+|++|+.||...... ........ +..    .+ .+..    ....
T Consensus       230 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~-~~~~~~~~-~~~----~~-~~~~----~s~~  298 (478)
T PTZ00267        230 SFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR-EIMQQVLY-GKY----DP-FPCP----VSSG  298 (478)
T ss_pred             ccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHh-CCC----CC-CCcc----CCHH
Confidence            2247889999997533  478899999999999999999999754322 11111111 111    01 1111    1234


Q ss_pred             HHHHHHHccCCCCCCCCChHHHHH
Q 021659          267 LLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      +.+++.+||..||+.||++.+++.
T Consensus       299 ~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        299 MKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             HHHHHHHHhccChhhCcCHHHHHh
Confidence            566677999999999999998864

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=8.3e-37  Score=273.39  Aligned_cols=227  Identities=18%  Similarity=0.221  Sum_probs=176.8

Q ss_pred             cccccccCCCceEEEEEEc-CCcEEEEEEeccc----cccHHHHHHHHHHHccCCCC-CcceEeeeEe-CCeeEEEEeeC
Q 021659           42 FHRIVYTNSHGAAYKARFQ-DGEVALVKEIQAL----NLEKDAFYREIQLLGRLHHR-HLLALQGFST-GRKRLLVFDNI  114 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~----~~~~~~~~~ei~~l~~l~h~-niv~~~~~~~-~~~~~lv~e~~  114 (309)
                      +.+.||+|+||.||+|+.. +++.||+|++...    ....+.+..|++++..+.|+ +|+.+++++. ....|+||||+
T Consensus         4 ~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~   83 (324)
T cd05587           4 FLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYV   83 (324)
T ss_pred             EEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCC
Confidence            3468999999999999974 4688999998543    22345678899999999765 5777887665 46788999999


Q ss_pred             CCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------
Q 021659          115 ENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------  188 (309)
Q Consensus       115 ~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------  188 (309)
                      ++|+|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....      
T Consensus        84 ~~g~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~l---H~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~  158 (324)
T cd05587          84 NGGDLMYHIQQ--VGKFKEPHAVFYAAEIAIGLFFL---HSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTT  158 (324)
T ss_pred             CCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCce
Confidence            99999999876  46789999999999999999999   77899999999999999999999999999876321      


Q ss_pred             -ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHH
Q 021659          189 -NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELK  265 (309)
Q Consensus       189 -~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  265 (309)
                       ...+++.|+|||....  .+.++|||||||++|+|++|+.||.+...... .......       ....+...    ..
T Consensus       159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~-~~~i~~~-------~~~~~~~~----~~  226 (324)
T cd05587         159 RTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL-FQSIMEH-------NVSYPKSL----SK  226 (324)
T ss_pred             eeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH-HHHHHcC-------CCCCCCCC----CH
Confidence             2357889999997543  47889999999999999999999976543221 1111110       01111111    23


Q ss_pred             HHHHHHHHccCCCCCCCCCh
Q 021659          266 KLLAVARLCIKTKDKPTISI  285 (309)
Q Consensus       266 ~l~~l~~~cl~~dp~~Rps~  285 (309)
                      .+.+++.+||..||++|++.
T Consensus       227 ~~~~li~~~l~~~P~~R~~~  246 (324)
T cd05587         227 EAVSICKGLLTKHPAKRLGC  246 (324)
T ss_pred             HHHHHHHHHhhcCHHHcCCC
Confidence            45566679999999999986

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=1.6e-36  Score=263.73  Aligned_cols=241  Identities=19%  Similarity=0.253  Sum_probs=188.1

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCC
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIEN  116 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~  116 (309)
                      .+.||+|++|.||++.. .++..+++|.+....    ...+++.+|+.+++.++|+||+++++++. +...++++||+++
T Consensus         7 ~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~   86 (267)
T cd08229           7 EKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADA   86 (267)
T ss_pred             hhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCC
Confidence            46799999999999996 578899999875422    12357889999999999999999999664 4678899999999


Q ss_pred             CCHHHhhcC--CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------
Q 021659          117 GSLKEHLND--PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------  188 (309)
Q Consensus       117 ~sL~~~i~~--~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------  188 (309)
                      ++|.+++..  .....+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++.++++|||++....      
T Consensus        87 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~L---H~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~  163 (267)
T cd08229          87 GDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHM---HSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA  163 (267)
T ss_pred             CCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCccc
Confidence            999998863  2245689999999999999999999   78899999999999999999999999999876432      


Q ss_pred             -ccCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHhCCCCCCCCccH-HHHHHHhcccccccccccCcCCCCCCHHHH
Q 021659          189 -NYATMPHSSCPEDC--STQDCSNIIFQLGVLILELVTGQSPEEGDVDL-IQWIQESSISSSIHRMIDPDLGGSYDSKEL  264 (309)
Q Consensus       189 -~~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  264 (309)
                       ...++..|++||..  ...+.++|+||||+++++|++|..||.+.... .......      .....+.....   ...
T Consensus       164 ~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~---~~~  234 (267)
T cd08229         164 HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI------EQCDYPPLPSD---HYS  234 (267)
T ss_pred             ccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhh------hcCCCCCCCcc---ccc
Confidence             23566789999975  33477899999999999999999999654321 1111111      11111112111   123


Q ss_pred             HHHHHHHHHccCCCCCCCCChHHHHHHHhhh
Q 021659          265 KKLLAVARLCIKTKDKPTISIPQISRYLQNE  295 (309)
Q Consensus       265 ~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~  295 (309)
                      ..+.+++.+||+.||++|||+.+|++.++++
T Consensus       235 ~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~  265 (267)
T cd08229         235 EELRQLVNMCINPDPEKRPDITYVYDVAKRM  265 (267)
T ss_pred             HHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence            4566666799999999999999999998865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.8e-36  Score=261.48  Aligned_cols=233  Identities=19%  Similarity=0.224  Sum_probs=184.1

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc------cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL------EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIE  115 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~------~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~  115 (309)
                      +.||+|++|.||++.. .+++.+++|.+.....      ..+.+.+|++++++++||||+++++++.+ ...++++||++
T Consensus         8 ~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   87 (263)
T cd06625           8 KLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEYMP   87 (263)
T ss_pred             ceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEECC
Confidence            6899999999999986 4588999998854322      12467889999999999999999997754 67889999999


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------  188 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------  188 (309)
                      +++|.+.+..  ...+++..+..++.+++.||.+|   |+.+++|+||+|+||+++.++.++|+|||++....       
T Consensus        88 ~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~l---H~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~  162 (263)
T cd06625          88 GGSVKDQLKA--YGALTETVTRKYTRQILEGVEYL---HSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGT  162 (263)
T ss_pred             CCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEEeecccceeccccccccc
Confidence            9999999876  46688999999999999999999   78899999999999999999999999999986432       


Q ss_pred             ---ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHH
Q 021659          189 ---NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKE  263 (309)
Q Consensus       189 ---~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  263 (309)
                         ...++..|.+||...+  .+.++||||||+++|++++|+.||............... ..     .+.+...    .
T Consensus       163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-~~-----~~~~~~~----~  232 (263)
T cd06625         163 GMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQ-PT-----NPQLPSH----V  232 (263)
T ss_pred             cccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhcc-CC-----CCCCCcc----C
Confidence               1235568999997544  468899999999999999999999765433222221111 10     1111111    1


Q ss_pred             HHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          264 LKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       264 ~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      ...+.+++.+||..+|++|||+.+++..
T Consensus       233 ~~~~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         233 SPDARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             CHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence            2345567779999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=1.6e-36  Score=275.76  Aligned_cols=185  Identities=16%  Similarity=0.209  Sum_probs=159.5

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||++... +++.||+|++....    .....+..|++++.+++|+||+++++.+.+ ...|+||||+++|
T Consensus         7 ~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~gg   86 (363)
T cd05628           7 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGG   86 (363)
T ss_pred             EEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCCC
Confidence            68999999999999864 57899999985432    123467889999999999999999997665 6788999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---------
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---------  188 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---------  188 (309)
                      +|.+++..  ...+++..+..++.|++.||.||   |+.+|+||||||+||+++.++.+||+|||++....         
T Consensus        87 ~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~l---H~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~  161 (363)
T cd05628          87 DMMTLLMK--KDTLTEEETQFYIAETVLAIDSI---HQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYR  161 (363)
T ss_pred             cHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HhCCeEecCCCHHHeEECCCCCEEEeeccCcccccccccccccc
Confidence            99999976  56799999999999999999999   78899999999999999999999999999976321         


Q ss_pred             ---------------------------------ccCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHhCCCCCCCCcc
Q 021659          189 ---------------------------------NYATMPHSSCPEDC--STQDCSNIIFQLGVLILELVTGQSPEEGDVD  233 (309)
Q Consensus       189 ---------------------------------~~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~  233 (309)
                                                       ...||+.|+|||..  ...+.++|||||||++|+|++|+.||.+...
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~  241 (363)
T cd05628         162 NLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETP  241 (363)
T ss_pred             cccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCCH
Confidence                                             13578899999974  3357899999999999999999999986543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=7.2e-37  Score=273.42  Aligned_cols=226  Identities=22%  Similarity=0.247  Sum_probs=174.7

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHH-HHccCCCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQ-LLGRLHHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~-~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||+++.. +++.||+|.+....    .....+..|.. +++.++||||+++++.+.+ ...++||||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            36899999999999974 57899999985432    12234555554 6788899999999996654 778899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------c
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------N  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~  189 (309)
                      ++|...+..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....       .
T Consensus        81 ~~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~l---H~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~  155 (321)
T cd05603          81 GELFFHLQR--ERCFLEPRARFYAAEVASAIGYL---HSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTST  155 (321)
T ss_pred             CCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCcccc
Confidence            999988875  56788999999999999999999   78899999999999999999999999999876421       2


Q ss_pred             cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          190 YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ..+++.|+|||....  .+.++|||||||++|+|++|+.||...... +....... ..      ..++..    ....+
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~-~~------~~~~~~----~~~~~  223 (321)
T cd05603         156 FCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVS-QMYDNILH-KP------LQLPGG----KTVAA  223 (321)
T ss_pred             ccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHH-HHHHHHhc-CC------CCCCCC----CCHHH
Confidence            346789999997543  478899999999999999999999765322 22111111 00      011111    12345


Q ss_pred             HHHHHHccCCCCCCCCChH
Q 021659          268 LAVARLCIKTKDKPTISIP  286 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~  286 (309)
                      .+++.+||+.||++||++.
T Consensus       224 ~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         224 CDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             HHHHHHHccCCHhhcCCCC
Confidence            5667799999999999874

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=1.5e-36  Score=264.53  Aligned_cols=234  Identities=21%  Similarity=0.285  Sum_probs=184.6

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccC-CCCCcceEeeeEeC-------CeeEEEEeeC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRL-HHRHLLALQGFSTG-------RKRLLVFDNI  114 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-------~~~~lv~e~~  114 (309)
                      +.||+|+||.||+|.. .+++.+|+|.+.........+..|+.+++++ +|+|++++++++..       ...+++|||+
T Consensus        12 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~   91 (272)
T cd06637          12 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFC   91 (272)
T ss_pred             HheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcC
Confidence            5799999999999996 4578999999876655667789999999999 69999999997642       3568999999


Q ss_pred             CCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-----
Q 021659          115 ENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-----  189 (309)
Q Consensus       115 ~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-----  189 (309)
                      .+++|.+++.......+++..+..++.|++.|+.||   |+.+++|+||+|+||+++.++.++|+|||++.....     
T Consensus        92 ~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~L---H~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~~~  168 (272)
T cd06637          92 GAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL---HQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRR  168 (272)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HHCCCccCCCCHHHEEECCCCCEEEccCCCceecccccccC
Confidence            999999998764456789999999999999999999   778999999999999999999999999999864422     


Q ss_pred             --cCCCCCCCCCCCCC-------CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCC
Q 021659          190 --YATMPHSSCPEDCS-------TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYD  260 (309)
Q Consensus       190 --~~~~~~~~~PE~~~-------~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  260 (309)
                        ..++..|.+||...       ..+.++|+||||+++++|++|+.||............. . .     ..+.......
T Consensus       169 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~-~-~-----~~~~~~~~~~  241 (272)
T cd06637         169 NTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP-R-N-----PAPRLKSKKW  241 (272)
T ss_pred             CcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHh-c-C-----CCCCCCCCCc
Confidence              34667899999643       24668999999999999999999997544332222111 1 0     0111111111


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          261 SKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       261 ~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                         ...+.+++.+||..+|.+|||+.+++.
T Consensus       242 ---~~~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         242 ---SKKFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             ---CHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence               234556667999999999999999875

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=1.1e-36  Score=267.25  Aligned_cols=238  Identities=18%  Similarity=0.265  Sum_probs=183.8

Q ss_pred             ccccccCCCceEEEEEEc------CCcEEEEEEecccccc--HHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEee
Q 021659           43 HRIVYTNSHGAAYKARFQ------DGEVALVKEIQALNLE--KDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~------~~~~va~K~~~~~~~~--~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      .+.||+|+||.||+|...      .+..||+|.+......  .+.+..|+.++.+++||||+++++++.. ...++++||
T Consensus        10 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~   89 (283)
T cd05091          10 MEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSY   89 (283)
T ss_pred             HHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEc
Confidence            367999999999999863      2478999998643322  3568899999999999999999997765 667899999


Q ss_pred             CCCCCHHHhhcCC--------------CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEe
Q 021659          114 IENGSLKEHLNDP--------------LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLS  179 (309)
Q Consensus       114 ~~~~sL~~~i~~~--------------~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~  179 (309)
                      +++++|.+++...              ....+++..+..++.|++.||.|+   |+.+++||||||+||+++.++.+||+
T Consensus        90 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~l---H~~gi~H~dlkp~Nil~~~~~~~kl~  166 (283)
T cd05091          90 CSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFL---SSHHVVHKDLATRNVLVFDKLNVKIS  166 (283)
T ss_pred             CCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHH---HHcCccccccchhheEecCCCceEec
Confidence            9999999998421              123588889999999999999999   78899999999999999999999999


Q ss_pred             ccccccccc---------ccCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccc
Q 021659          180 DVGFFNSVR---------NYATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSI  247 (309)
Q Consensus       180 dfg~~~~~~---------~~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~  247 (309)
                      |||++....         ...+++.|+|||..  ...+.++||||||++++||++ |..||.+.... ........ ...
T Consensus       167 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-~~~~~i~~-~~~  244 (283)
T cd05091         167 DLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ-DVIEMIRN-RQV  244 (283)
T ss_pred             ccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHc-CCc
Confidence            999876432         22345689999964  345788999999999999998 88888754322 22221111 111


Q ss_pred             cccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhh
Q 021659          248 HRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQN  294 (309)
Q Consensus       248 ~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~  294 (309)
                           ......    ....+.+++.+||+.+|++||++.+|+..|+.
T Consensus       245 -----~~~~~~----~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         245 -----LPCPDD----CPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             -----CCCCCC----CCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence                 011111    23446677779999999999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=1.3e-36  Score=269.64  Aligned_cols=244  Identities=21%  Similarity=0.302  Sum_probs=184.9

Q ss_pred             cccccccCCCceEEEEEEc-CCc--EEEEEEeccc--cccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEeeC
Q 021659           42 FHRIVYTNSHGAAYKARFQ-DGE--VALVKEIQAL--NLEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFDNI  114 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~-~~~--~va~K~~~~~--~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e~~  114 (309)
                      +.+.||+|+||.||+|.+. ++.  .+++|.+...  ....+.+.+|++++.++ +|+||+++++++.. ...++|+||+
T Consensus        11 ~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~   90 (303)
T cd05088          11 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA   90 (303)
T ss_pred             eeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeC
Confidence            4578999999999999974 343  4577766432  22345788999999999 89999999997754 6788999999


Q ss_pred             CCCCHHHhhcCCC--------------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEec
Q 021659          115 ENGSLKEHLNDPL--------------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSD  180 (309)
Q Consensus       115 ~~~sL~~~i~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~d  180 (309)
                      ++++|.+++....              ...+++.++..++.|++.||+||   |+++++||||||+||+++.++.+||+|
T Consensus        91 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~L---H~~gi~H~dlkp~Nili~~~~~~kl~d  167 (303)
T cd05088          91 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIAD  167 (303)
T ss_pred             CCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHH---HhCCccccccchheEEecCCCcEEeCc
Confidence            9999999986421              23688999999999999999999   788999999999999999999999999


Q ss_pred             ccccccccc------cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccc
Q 021659          181 VGFFNSVRN------YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMI  251 (309)
Q Consensus       181 fg~~~~~~~------~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~  251 (309)
                      ||++.....      ...+..|++||....  .+.++||||||+++++|+| |..||...... +....... .     .
T Consensus       168 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~-~-----~  240 (303)
T cd05088         168 FGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-ELYEKLPQ-G-----Y  240 (303)
T ss_pred             cccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH-HHHHHHhc-C-----C
Confidence            999853221      122456999996433  4788999999999999998 99999654322 11211111 0     0


Q ss_pred             cCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccc
Q 021659          252 DPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQ  299 (309)
Q Consensus       252 ~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~  299 (309)
                      .......    ....+.+++.+||+.+|+.||++.+++..|++++.-.
T Consensus       241 ~~~~~~~----~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~  284 (303)
T cd05088         241 RLEKPLN----CDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER  284 (303)
T ss_pred             cCCCCCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence            0111111    1234567777999999999999999999998765544

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=7.1e-37  Score=262.59  Aligned_cols=244  Identities=19%  Similarity=0.175  Sum_probs=187.4

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCC-cceEeeeEeC-C------eeEEEE
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRH-LLALQGFSTG-R------KRLLVF  111 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~n-iv~~~~~~~~-~------~~~lv~  111 (309)
                      ++||+|+||+||+|+. .+|..||+|++.....   -.....+|+.+|+.|+|+| |+.+.+++.. .      ..++|+
T Consensus        17 eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvf   96 (323)
T KOG0594|consen   17 EKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVF   96 (323)
T ss_pred             HHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEE
Confidence            4699999999999995 5688999999954433   2234689999999999999 9999997754 3      678999


Q ss_pred             eeCCCCCHHHhhcCCCC--CCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-
Q 021659          112 DNIENGSLKEHLNDPLK--TPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-  188 (309)
Q Consensus       112 e~~~~~sL~~~i~~~~~--~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-  188 (309)
                      ||++. +|.+++.....  +.++...+..++.|++.||+||   |+++|+||||||+||+++.+|.+||+|||+|+... 
T Consensus        97 e~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~---H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~i  172 (323)
T KOG0594|consen   97 EFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFL---HSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSI  172 (323)
T ss_pred             Eeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHH---HhCCeecccCCcceEEECCCCcEeeeccchHHHhcC
Confidence            99987 99999976432  4677789999999999999999   88899999999999999999999999999987443 


Q ss_pred             ------ccCCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHh--ccccccccc------c
Q 021659          189 ------NYATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQES--SISSSIHRM------I  251 (309)
Q Consensus       189 ------~~~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~--~~~~~~~~~------~  251 (309)
                            ....|.-|.|||...+   ++...|+||+||++.||+++++.|.++.+..+.....  ........|      .
T Consensus       173 p~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~  252 (323)
T KOG0594|consen  173 PMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLP  252 (323)
T ss_pred             CcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccc
Confidence                  3355667899996433   4788999999999999999999999887766553321  111110111      0


Q ss_pred             cCcC--C-----CCCCHHH---HHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          252 DPDL--G-----GSYDSKE---LKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       252 ~~~l--~-----~~~~~~~---~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      +-..  .     .......   ..+..+++.+||+++|+.|.|+...+..
T Consensus       253 ~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h  302 (323)
T KOG0594|consen  253 DYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH  302 (323)
T ss_pred             cccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence            1110  0     0000101   1366778889999999999999998864

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=2.3e-36  Score=263.47  Aligned_cols=238  Identities=21%  Similarity=0.293  Sum_probs=182.1

Q ss_pred             ccccCCCceEEEEEEcC-Cc--EEEEEEeccc--cccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           45 IVYTNSHGAAYKARFQD-GE--VALVKEIQAL--NLEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~~-~~--~va~K~~~~~--~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      .||+|+||.||+|...+ +.  .+++|.+...  ....+.+.+|+++++++ +||||+++++++.. ...+++|||++++
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~   81 (270)
T cd05047           2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG   81 (270)
T ss_pred             cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence            58999999999999743 33  4688877532  22345788999999999 79999999997765 6678999999999


Q ss_pred             CHHHhhcCCC--------------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccc
Q 021659          118 SLKEHLNDPL--------------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGF  183 (309)
Q Consensus       118 sL~~~i~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~  183 (309)
                      +|.+++....              ...+++..+..++.+++.||+||   |+.+++|+||+|+||++++++.+|++|||+
T Consensus        82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~l---H~~~i~H~dikp~nili~~~~~~kl~dfgl  158 (270)
T cd05047          82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGL  158 (270)
T ss_pred             cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHH---HHCCEeecccccceEEEcCCCeEEECCCCC
Confidence            9999986421              23578999999999999999999   778999999999999999999999999999


Q ss_pred             cccccc------cCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCc
Q 021659          184 FNSVRN------YATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPD  254 (309)
Q Consensus       184 ~~~~~~------~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (309)
                      +.....      ...+..|.+||..  ...+.++||||||+++++|++ |..||.+... ...........      ...
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~-~~~~~~~~~~~------~~~  231 (270)
T cd05047         159 SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-AELYEKLPQGY------RLE  231 (270)
T ss_pred             ccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH-HHHHHHHhCCC------CCC
Confidence            753221      1224569999964  334788999999999999997 9999965432 12121111110      001


Q ss_pred             CCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhh
Q 021659          255 LGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEV  296 (309)
Q Consensus       255 l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~  296 (309)
                      ...    .....+.+++.+||..+|.+|||+.+++..|++++
T Consensus       232 ~~~----~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         232 KPL----NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             CCC----cCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence            111    11245667777999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=6.9e-37  Score=269.50  Aligned_cols=241  Identities=18%  Similarity=0.244  Sum_probs=185.1

Q ss_pred             ccccccCCCceEEEEEEc------CCcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEee
Q 021659           43 HRIVYTNSHGAAYKARFQ------DGEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~------~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      .+.||+|+||.||+|...      ....+++|.+.....  ..+.+.+|+.+++.++||||+++++.+.. ...++++||
T Consensus         5 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   84 (290)
T cd05045           5 GKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEY   84 (290)
T ss_pred             cccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEe
Confidence            367999999999999852      235688888754332  23578899999999999999999997754 677899999


Q ss_pred             CCCCCHHHhhcCC----------------------CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeC
Q 021659          114 IENGSLKEHLNDP----------------------LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLD  171 (309)
Q Consensus       114 ~~~~sL~~~i~~~----------------------~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~  171 (309)
                      +.+++|.+++...                      ....+++..++.++.+++.||.||   |+.+++||||+|+||+++
T Consensus        85 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~L---H~~~ivH~dikp~nill~  161 (290)
T cd05045          85 AKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYL---AEMKLVHRDLAARNVLVA  161 (290)
T ss_pred             cCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHH---HHCCeehhhhhhheEEEc
Confidence            9999999987531                      123588899999999999999999   778999999999999999


Q ss_pred             CCCceeEecccccccccc---------cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHH
Q 021659          172 ENFTAKLSDVGFFNSVRN---------YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQ  239 (309)
Q Consensus       172 ~~~~~kl~dfg~~~~~~~---------~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~  239 (309)
                      .++.++|+|||++.....         ..++..|++||...  ..+.++||||||+++++|++ |..||.+.... ....
T Consensus       162 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-~~~~  240 (290)
T cd05045         162 EGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE-RLFN  240 (290)
T ss_pred             CCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH-HHHH
Confidence            999999999999864321         12346799999643  34788999999999999998 99999754321 1111


Q ss_pred             HhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          240 ESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       240 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                       .....     .......    .....+.+++.+||+.+|++||++.+++..|+++..
T Consensus       241 -~~~~~-----~~~~~~~----~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~  288 (290)
T cd05045         241 -LLKTG-----YRMERPE----NCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV  288 (290)
T ss_pred             -HHhCC-----CCCCCCC----CCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence             11110     0111111    113456677889999999999999999999998764

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.7e-36  Score=259.06  Aligned_cols=235  Identities=20%  Similarity=0.265  Sum_probs=184.6

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      +.||+|++|.||++...+++.|++|.+.....  ..+.+.+|++++++++|+||+++++++.+ ...++|+||+++++|.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~   80 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL   80 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence            36899999999999986689999998854433  34578999999999999999999997765 6788999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc---------cC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN---------YA  191 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~---------~~  191 (309)
                      +++... ...+++..+..++.+++.||.+|   |+++++|+||+|+||+++.++.++|+|||++.....         ..
T Consensus        81 ~~l~~~-~~~~~~~~~~~~~~~~~~~l~~l---H~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~  156 (251)
T cd05041          81 TFLRKK-KNRLTVKKLLQMSLDAAAGMEYL---ESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQ  156 (251)
T ss_pred             HHHHhc-CCCCCHHHHHHHHHHHHHHHHHH---HhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCc
Confidence            998653 34688999999999999999999   788999999999999999999999999998864331         11


Q ss_pred             CCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHH
Q 021659          192 TMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL  268 (309)
Q Consensus       192 ~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~  268 (309)
                      .+..|.+||...  ..+.++|+||||+++++|++ |..||........... .....   .   ...    +......+.
T Consensus       157 ~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~-~~~~~---~---~~~----~~~~~~~~~  225 (251)
T cd05041         157 IPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRER-IESGY---R---MPA----PQLCPEEIY  225 (251)
T ss_pred             ceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHH-HhcCC---C---CCC----CccCCHHHH
Confidence            234599999643  34788999999999999999 8888875542211111 11000   0   001    111234566


Q ss_pred             HHHHHccCCCCCCCCChHHHHHHHh
Q 021659          269 AVARLCIKTKDKPTISIPQISRYLQ  293 (309)
Q Consensus       269 ~l~~~cl~~dp~~Rps~~evl~~L~  293 (309)
                      +++.+||..+|++|||+.|+++.|+
T Consensus       226 ~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         226 RLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             HHHHHHhccChhhCcCHHHHHHHhh
Confidence            7777999999999999999999986

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=3.6e-36  Score=264.44  Aligned_cols=236  Identities=17%  Similarity=0.247  Sum_probs=181.9

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc----cHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL----EKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~----~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||++.. .+++.+|+|.+.....    ....+.+|++++++++|+|++.+.+.+. +...+++|||++++
T Consensus         6 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~   85 (285)
T cd05632           6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGG   85 (285)
T ss_pred             EEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccCc
Confidence            5799999999999997 4688999998854322    2235678999999999999999988654 46788999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------ccC
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------NYA  191 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------~~~  191 (309)
                      +|.+.+.......+++..+..++.|++.||.||   |+.+++|+||+|+||+++.++.++|+|||++....      ...
T Consensus        86 ~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~l---H~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~  162 (285)
T cd05632          86 DLKFHIYNMGNPGFEEERALFYAAEILCGLEDL---HRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGRV  162 (285)
T ss_pred             cHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccCCC
Confidence            999888654455799999999999999999999   78899999999999999999999999999885432      235


Q ss_pred             CCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHH
Q 021659          192 TMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLA  269 (309)
Q Consensus       192 ~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~  269 (309)
                      ++..|++||...  ..+.++|+||||+++++|++|..||....................    .......    ...+.+
T Consensus       163 g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~----~~~~~~~----~~~~~~  234 (285)
T cd05632         163 GTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETE----EVYSAKF----SEEAKS  234 (285)
T ss_pred             CCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccc----cccCccC----CHHHHH
Confidence            678999999753  347889999999999999999999976543221111000000000    0111111    234556


Q ss_pred             HHHHccCCCCCCCCC-----hHHHHH
Q 021659          270 VARLCIKTKDKPTIS-----IPQISR  290 (309)
Q Consensus       270 l~~~cl~~dp~~Rps-----~~evl~  290 (309)
                      ++.+||+.||++||+     +.++++
T Consensus       235 li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05632         235 ICKMLLTKDPKQRLGCQEEGAGEVKR  260 (285)
T ss_pred             HHHHHccCCHhHcCCCcccChHHHHc
Confidence            677999999999999     667664

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=1.5e-36  Score=263.99  Aligned_cols=238  Identities=21%  Similarity=0.222  Sum_probs=183.5

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEeccccc-cHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCH
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQALNL-EKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSL  119 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~-~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL  119 (309)
                      .+.||+|+||.||+|+. .+++.||+|++..... ....+.+|+.++++++||||+++++.+. +...++|+||+++++|
T Consensus        14 ~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L   93 (267)
T cd06646          14 IQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSL   93 (267)
T ss_pred             hheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCcH
Confidence            36899999999999996 5678899998854332 3346788999999999999999999665 4677899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYAT  192 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~~  192 (309)
                      .+++..  ...+++..+..++.|++.|+.||   |+.+++|+||+|.||+++.++.++|+|||++....       ...+
T Consensus        94 ~~~~~~--~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  168 (267)
T cd06646          94 QDIYHV--TGPLSELQIAYVCRETLQGLAYL---HSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFIG  168 (267)
T ss_pred             HHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCCHHHEEECCCCCEEECcCccceeecccccccCcccc
Confidence            998875  46789999999999999999999   77899999999999999999999999999986442       2245


Q ss_pred             CCCCCCCCCCC-----CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          193 MPHSSCPEDCS-----TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       193 ~~~~~~PE~~~-----~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      +..|++||...     ..+.++|+||||+++++|++|+.||........... ...    .....+....  .......+
T Consensus       169 ~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~-~~~----~~~~~~~~~~--~~~~~~~~  241 (267)
T cd06646         169 TPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFL-MSK----SNFQPPKLKD--KTKWSSTF  241 (267)
T ss_pred             CccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhee-eec----CCCCCCCCcc--ccccCHHH
Confidence            67899999642     235789999999999999999999864322111110 000    0011111111  01123456


Q ss_pred             HHHHHHccCCCCCCCCChHHHHHHH
Q 021659          268 LAVARLCIKTKDKPTISIPQISRYL  292 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~evl~~L  292 (309)
                      .+++.+||..+|+.|||++++++.|
T Consensus       242 ~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         242 HNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             HHHHHHHhhCChhhCcCHHHHhcCC
Confidence            6777799999999999999998754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=4.5e-36  Score=259.25  Aligned_cols=237  Identities=21%  Similarity=0.335  Sum_probs=187.9

Q ss_pred             cccccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           42 FHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      +.+.||+|++|.||++.+.+++.+++|.+.........+.+|++++++++|||++++++++.. ...++++||+++++|.
T Consensus         8 ~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~   87 (256)
T cd05112           8 LVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLS   87 (256)
T ss_pred             EEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHH
Confidence            346899999999999998778889999987666666789999999999999999999997754 6778999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc--------cCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN--------YAT  192 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~--------~~~  192 (309)
                      +++... ...+++..+..++.+++.|+.+|   |+.+++|+||+|+||+++.++.++|+|||.+.....        ...
T Consensus        88 ~~~~~~-~~~~~~~~~~~~~~~l~~~l~~l---H~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~  163 (256)
T cd05112          88 DYLRAQ-RGKFSQETLLGMCLDVCEGMAYL---ESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKF  163 (256)
T ss_pred             HHHHhC-ccCCCHHHHHHHHHHHHHHHHHH---HHCCccccccccceEEEcCCCeEEECCCcceeecccCcccccCCCcc
Confidence            998652 24688999999999999999999   778999999999999999999999999998764321        123


Q ss_pred             CCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHH
Q 021659          193 MPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLA  269 (309)
Q Consensus       193 ~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~  269 (309)
                      +..|++||...  ..+.++||||||+++|+|++ |..||..... ...........   ....+..    .   ...+.+
T Consensus       164 ~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-~~~~~~~~~~~---~~~~~~~----~---~~~~~~  232 (256)
T cd05112         164 PVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN-SEVVETINAGF---RLYKPRL----A---SQSVYE  232 (256)
T ss_pred             chhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH-HHHHHHHhCCC---CCCCCCC----C---CHHHHH
Confidence            35799999753  34678999999999999998 8999865432 22222211110   1111211    1   245667


Q ss_pred             HHHHccCCCCCCCCChHHHHHHHh
Q 021659          270 VARLCIKTKDKPTISIPQISRYLQ  293 (309)
Q Consensus       270 l~~~cl~~dp~~Rps~~evl~~L~  293 (309)
                      ++.+||+.+|++|||+.++++.|.
T Consensus       233 l~~~~l~~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         233 LMQHCWKERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             HHHHHcccChhhCCCHHHHHHhhC
Confidence            777999999999999999998873

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=2.8e-36  Score=262.79  Aligned_cols=242  Identities=16%  Similarity=0.225  Sum_probs=188.9

Q ss_pred             cccccccCCCceEEEEEEcC----CcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCC
Q 021659           42 FHRIVYTNSHGAAYKARFQD----GEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIE  115 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~----~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~  115 (309)
                      +.+.||+|++|.||+|.+.+    ...|++|......  ...+.+.+|+.++++++||||+++++++.+...++||||++
T Consensus        10 ~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~lv~e~~~   89 (270)
T cd05056          10 LGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENPVWIVMELAP   89 (270)
T ss_pred             eeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCCcEEEEEcCC
Confidence            44689999999999998633    2468889875433  23457899999999999999999999888878899999999


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc------
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN------  189 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~------  189 (309)
                      +++|.+++... ...+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++.++++|||++.....      
T Consensus        90 ~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~l---H~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~  165 (270)
T cd05056          90 LGELRSYLQVN-KYSLDLASLILYSYQLSTALAYL---ESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKA  165 (270)
T ss_pred             CCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccccChheEEEecCCCeEEccCceeeecccccceec
Confidence            99999999753 24689999999999999999999   788999999999999999999999999998764321      


Q ss_pred             --cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHH
Q 021659          190 --YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKEL  264 (309)
Q Consensus       190 --~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  264 (309)
                        ..++..|++||...  ..+.++||||||++++++++ |+.||......... ........      .......    .
T Consensus       166 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~-~~~~~~~~------~~~~~~~----~  234 (270)
T cd05056         166 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVI-GRIENGER------LPMPPNC----P  234 (270)
T ss_pred             CCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHH-HHHHcCCc------CCCCCCC----C
Confidence              12235799999643  34788999999999999986 99999765432221 11111111      1111111    2


Q ss_pred             HHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcc
Q 021659          265 KKLLAVARLCIKTKDKPTISIPQISRYLQNEVDI  298 (309)
Q Consensus       265 ~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~  298 (309)
                      ..+.+++.+|+..+|++|||+.+++..|++..+-
T Consensus       235 ~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~  268 (270)
T cd05056         235 PTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE  268 (270)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            3566677799999999999999999999986653

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=3.3e-36  Score=261.53  Aligned_cols=234  Identities=19%  Similarity=0.234  Sum_probs=184.4

Q ss_pred             ccccccCCCceEEEEEEcCCcEEEEEEecccccc-------HHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeC
Q 021659           43 HRIVYTNSHGAAYKARFQDGEVALVKEIQALNLE-------KDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNI  114 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~-------~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~  114 (309)
                      .+.||+|+||.||+|...+++.+|+|.+......       .+.+.+|++.+++++|+||+++.+++.+ ...++++||+
T Consensus         5 ~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   84 (265)
T cd06631           5 GEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFV   84 (265)
T ss_pred             cceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecC
Confidence            3679999999999999878899999988533211       2457889999999999999999998765 6778999999


Q ss_pred             CCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------
Q 021659          115 ENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------  188 (309)
Q Consensus       115 ~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------  188 (309)
                      ++++|.+++..  ...+++..+..++.+++.||+||   |+.+++|+||+|+||+++.++.++++|||++....      
T Consensus        85 ~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~  159 (265)
T cd06631          85 PGGSISSILNR--FGPLPEPVFCKYTKQILDGVAYL---HNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHG  159 (265)
T ss_pred             CCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccc
Confidence            99999999976  45688999999999999999999   77889999999999999999999999999875431      


Q ss_pred             -------ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCC
Q 021659          189 -------NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSY  259 (309)
Q Consensus       189 -------~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  259 (309)
                             ...++..|.+||....  .+.++|+||||+++++|++|+.||..................     .+.+... 
T Consensus       160 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----~~~~~~~-  233 (265)
T cd06631         160 THSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGL-----MPRLPDS-  233 (265)
T ss_pred             cccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCC-----CCCCCCC-
Confidence                   2346678999997544  368899999999999999999999765433222111111011     1112211 


Q ss_pred             CHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          260 DSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       260 ~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                         ....+.+++.+||+.+|++||++.+++.
T Consensus       234 ---~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         234 ---FSAAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             ---CCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence               1244566677999999999999999875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=7.2e-37  Score=273.90  Aligned_cols=227  Identities=20%  Similarity=0.221  Sum_probs=175.7

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc----ccHHHHHHHHH-HHccCCCCCcceEeeeEe-CCeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN----LEKDAFYREIQ-LLGRLHHRHLLALQGFST-GRKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~----~~~~~~~~ei~-~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||+++. .+++.+|+|++....    .....+..|.. +++.++||||+++++.+. +...++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            3689999999999996 468899999985432    22344555654 467789999999998665 4778899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------c
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------N  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~  189 (309)
                      ++|..++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....       .
T Consensus        81 ~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~l---H~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~  155 (325)
T cd05604          81 GELFFHLQR--ERSFPEPRARFYAAEIASALGYL---HSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTT  155 (325)
T ss_pred             CCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCccc
Confidence            999998876  56799999999999999999999   78899999999999999999999999999976421       2


Q ss_pred             cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          190 YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ..++..|+|||....  .+.++|||||||++|+|++|+.||....... ....... ..      ..+...    ....+
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~-~~~~~~~-~~------~~~~~~----~~~~~  223 (325)
T cd05604         156 FCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAE-MYDNILH-KP------LVLRPG----ASLTA  223 (325)
T ss_pred             ccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHH-HHHHHHc-CC------ccCCCC----CCHHH
Confidence            357889999997543  4788999999999999999999997653221 1111111 00      011111    12345


Q ss_pred             HHHHHHccCCCCCCCCChHH
Q 021659          268 LAVARLCIKTKDKPTISIPQ  287 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~e  287 (309)
                      .+++.+|++.+|.+||++.+
T Consensus       224 ~~ll~~ll~~~p~~R~~~~~  243 (325)
T cd05604         224 WSILEELLEKDRQRRLGAKE  243 (325)
T ss_pred             HHHHHHHhccCHHhcCCCCC
Confidence            56677999999999998863

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=2.9e-36  Score=260.36  Aligned_cols=237  Identities=20%  Similarity=0.276  Sum_probs=187.3

Q ss_pred             cccccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCCCCHHH
Q 021659           42 FHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKE  121 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~~sL~~  121 (309)
                      +.+.||+|+||.||++.. .++.+++|...... ..+.+.+|+.++++++|||++++++++.....+++|||+++++|.+
T Consensus        10 ~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~~~~~L~~   87 (254)
T cd05083          10 LGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV-TAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELMSKGNLVN   87 (254)
T ss_pred             eeeeeccCCCCceEeccc-CCCceEEEeecCcc-hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEECCCCCCHHH
Confidence            346899999999999985 56788999885432 4567899999999999999999999887777899999999999999


Q ss_pred             hhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc----cCCCCCCC
Q 021659          122 HLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN----YATMPHSS  197 (309)
Q Consensus       122 ~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~----~~~~~~~~  197 (309)
                      ++.......+++..+..++.+++.||.||   |+.+++||||+|+||+++.++.++|+|||++.....    ...+..|.
T Consensus        88 ~l~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~y~  164 (254)
T cd05083          88 FLRTRGRALVSVIQLLQFSLDVAEGMEYL---ESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWT  164 (254)
T ss_pred             HHHhcCcCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCCceec
Confidence            99765455689999999999999999999   788999999999999999999999999998864332    22345799


Q ss_pred             CCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHHc
Q 021659          198 CPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLC  274 (309)
Q Consensus       198 ~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~c  274 (309)
                      +||...  ..+.++|+||||+++++|++ |+.||...... ........ ..     .+.....    ....+.+++.+|
T Consensus       165 ~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-~~~~~~~~-~~-----~~~~~~~----~~~~~~~li~~~  233 (254)
T cd05083         165 APEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK-EVKECVEK-GY-----RMEPPEG----CPADVYVLMTSC  233 (254)
T ss_pred             CHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH-HHHHHHhC-CC-----CCCCCCc----CCHHHHHHHHHH
Confidence            999653  34678999999999999997 99998754322 11111111 10     0111111    134566777799


Q ss_pred             cCCCCCCCCChHHHHHHHhh
Q 021659          275 IKTKDKPTISIPQISRYLQN  294 (309)
Q Consensus       275 l~~dp~~Rps~~evl~~L~~  294 (309)
                      |+.+|+.||++.++++.|++
T Consensus       234 l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         234 WETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             cCCChhhCcCHHHHHHHHcc
Confidence            99999999999999999874

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=3.6e-36  Score=261.58  Aligned_cols=235  Identities=19%  Similarity=0.225  Sum_probs=182.7

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc-cHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL-EKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~-~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL~  120 (309)
                      +.||+|+||.||+++. .+++.||+|.+..... ....+.+|+.+++.++||||+++++.+. ....++++||+++++|.
T Consensus        15 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~   94 (267)
T cd06645          15 QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQ   94 (267)
T ss_pred             HHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcHH
Confidence            6799999999999986 4588999998864432 2346788999999999999999999664 47788999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccCCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYATM  193 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~~~  193 (309)
                      +++..  ...+++.++..++.+++.|+.||   |+.+++|+||+|+||+++.++.++|+|||++....       ...++
T Consensus        95 ~~~~~--~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  169 (267)
T cd06645          95 DIYHV--TGPLSESQIAYVSRETLQGLYYL---HSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIGT  169 (267)
T ss_pred             HHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcccccccccCc
Confidence            99876  46799999999999999999999   77899999999999999999999999999875432       23577


Q ss_pred             CCCCCCCCCC-----CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHH
Q 021659          194 PHSSCPEDCS-----TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL  268 (309)
Q Consensus       194 ~~~~~PE~~~-----~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~  268 (309)
                      ..|+|||...     ..+.++|+||||+++|+|++|..||............... .    ...+......  .....+.
T Consensus       170 ~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~-~----~~~~~~~~~~--~~~~~~~  242 (267)
T cd06645         170 PYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKS-N----FQPPKLKDKM--KWSNSFH  242 (267)
T ss_pred             ccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhcc-C----CCCCcccccC--CCCHHHH
Confidence            8999999642     2467899999999999999999998654322221111111 0    0011111100  1123456


Q ss_pred             HHHHHccCCCCCCCCChHHHHH
Q 021659          269 AVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       269 ~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      +++.+||..+|++||++.++++
T Consensus       243 ~li~~~l~~~P~~R~~~~~ll~  264 (267)
T cd06645         243 HFVKMALTKNPKKRPTAEKLLQ  264 (267)
T ss_pred             HHHHHHccCCchhCcCHHHHhc
Confidence            6777999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=2e-36  Score=271.24  Aligned_cols=243  Identities=16%  Similarity=0.187  Sum_probs=180.8

Q ss_pred             ccccccC--CCceEEEEEE-cCCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCC
Q 021659           43 HRIVYTN--SHGAAYKARF-QDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIE  115 (309)
Q Consensus        43 ~~~lg~G--~~~~v~~~~~-~~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~  115 (309)
                      .+.||+|  ++++||++.. .+++.||+|.+.....   ..+.+.+|+++++.++||||+++++++. +...++|+||++
T Consensus         3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~   82 (327)
T cd08227           3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA   82 (327)
T ss_pred             hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence            4678999  6789999986 5689999999864332   2345778999999999999999999765 477889999999


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------  188 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------  188 (309)
                      +++|.+++.......+++..+..++.|++.||.||   |+.+++||||||+||+++.++.++++||+......       
T Consensus        83 ~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~L---H~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (327)
T cd08227          83 YGSAKDLICTHFMDGMSELAIAYILQGVLKALDYI---HHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLR  159 (327)
T ss_pred             CCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HHCCEecCCCChhhEEEecCCcEEEcccchhhcccccccccc
Confidence            99999998654345689999999999999999999   78899999999999999999999999997542211       


Q ss_pred             -------ccCCCCCCCCCCCCC----CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccC----
Q 021659          189 -------NYATMPHSSCPEDCS----TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDP----  253 (309)
Q Consensus       189 -------~~~~~~~~~~PE~~~----~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----  253 (309)
                             ...++..|+|||...    ..+.++|||||||++++|++|+.||.............  ....+...+.    
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~  237 (327)
T cd08227         160 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKL--NGTVPCLLDTTTIP  237 (327)
T ss_pred             ccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHh--cCCccccccccchh
Confidence                   123456699999753    35788999999999999999999997533211111111  0111100000    


Q ss_pred             ---------------cC-------------C----CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          254 ---------------DL-------------G----GSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       254 ---------------~l-------------~----~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                                     ..             .    ..........+.+++.+||+.||++|||+.|+++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~  306 (327)
T cd08227         238 AEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN  306 (327)
T ss_pred             hhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence                           00             0    0001112345677788999999999999999985

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=5e-37  Score=285.34  Aligned_cols=239  Identities=16%  Similarity=0.190  Sum_probs=176.1

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC---------CeeEEEEee
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG---------RKRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~---------~~~~lv~e~  113 (309)
                      +.||+|+||.||+|... .++.||+|.+....   ....+|+.+++.++||||+++++++..         ...++||||
T Consensus        72 ~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~  148 (440)
T PTZ00036         72 NIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEF  148 (440)
T ss_pred             EEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEec
Confidence            58999999999999974 57899999884332   234579999999999999999885421         135589999


Q ss_pred             CCCCCHHHhhcC--CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCC-ceeEeccccccccc--
Q 021659          114 IENGSLKEHLND--PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENF-TAKLSDVGFFNSVR--  188 (309)
Q Consensus       114 ~~~~sL~~~i~~--~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~-~~kl~dfg~~~~~~--  188 (309)
                      +++ +|.+++..  .....+++..+..++.|++.||.||   |+.+|+||||||+||+++.++ .+||+|||+++...  
T Consensus       149 ~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yL---H~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~  224 (440)
T PTZ00036        149 IPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYI---HSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAG  224 (440)
T ss_pred             CCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCEecCCcCHHHEEEcCCCCceeeeccccchhccCC
Confidence            986 77776642  2256799999999999999999999   788999999999999998664 69999999987442  


Q ss_pred             ----ccCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccc-----c-------ccc
Q 021659          189 ----NYATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISS-----S-------IHR  249 (309)
Q Consensus       189 ----~~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~-----~-------~~~  249 (309)
                          ...+++.|+|||...   .++.++|||||||++|+|++|.+||.+..............+     .       ...
T Consensus       225 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~  304 (440)
T PTZ00036        225 QRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYAD  304 (440)
T ss_pred             CCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhc
Confidence                245688899999643   357889999999999999999999987654332222111000     0       000


Q ss_pred             cccCcCC-----CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHH
Q 021659          250 MIDPDLG-----GSYDSKELKKLLAVARLCIKTKDKPTISIPQIS  289 (309)
Q Consensus       250 ~~~~~l~-----~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl  289 (309)
                      +.-+.+.     ...+.....++.+++.+||.+||.+|||+.|++
T Consensus       305 ~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l  349 (440)
T PTZ00036        305 IKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEAL  349 (440)
T ss_pred             ccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence            0000000     000111124566777799999999999999998

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=2e-36  Score=264.75  Aligned_cols=238  Identities=19%  Similarity=0.288  Sum_probs=182.0

Q ss_pred             ccccccCCCceEEEEEEc------CCcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEee
Q 021659           43 HRIVYTNSHGAAYKARFQ------DGEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~------~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      .+.||+|++|.||+|...      .+..||+|++.....  ...++.+|+.+++.++||||+++++++.. ...++||||
T Consensus        11 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e~   90 (277)
T cd05062          11 SRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL   90 (277)
T ss_pred             eeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEec
Confidence            368999999999999753      346799998853322  23568899999999999999999997765 677899999


Q ss_pred             CCCCCHHHhhcCCC--------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccc
Q 021659          114 IENGSLKEHLNDPL--------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFN  185 (309)
Q Consensus       114 ~~~~sL~~~i~~~~--------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~  185 (309)
                      +++++|.+++....        ...+++..+..++.+++.||.||   |+.+++|+||||+||+++.++.++++|||++.
T Consensus        91 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---H~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~  167 (277)
T cd05062          91 MTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYL---NANKFVHRDLAARNCMVAEDFTVKIGDFGMTR  167 (277)
T ss_pred             CCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCcchheEEEcCCCCEEECCCCCcc
Confidence            99999999986421        13467888999999999999999   77899999999999999999999999999875


Q ss_pred             ccc---------ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccC
Q 021659          186 SVR---------NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDP  253 (309)
Q Consensus       186 ~~~---------~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (309)
                      ...         ...++..|++||...  ..+.++||||||+++|+|++ |..||.+.... ....... ......    
T Consensus       168 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~-~~~~~~~-~~~~~~----  241 (277)
T cd05062         168 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE-QVLRFVM-EGGLLD----  241 (277)
T ss_pred             ccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHH-cCCcCC----
Confidence            332         123356799999753  34788999999999999999 78888754321 1111111 111111    


Q ss_pred             cCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhh
Q 021659          254 DLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQN  294 (309)
Q Consensus       254 ~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~  294 (309)
                       ....    ....+.+++.+||+.||++|||+.|++..|++
T Consensus       242 -~~~~----~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~  277 (277)
T cd05062         242 -KPDN----CPDMLFELMRMCWQYNPKMRPSFLEIISSIKE  277 (277)
T ss_pred             -CCCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence             1111    12356677779999999999999999998873

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=6e-36  Score=260.66  Aligned_cols=240  Identities=21%  Similarity=0.206  Sum_probs=179.5

Q ss_pred             cccccCCCceEEEEEEcC---CcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQD---GEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~---~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||+|...+   +..+++|.+.....  ....+.+|+.++++++||||+++++++.+ ...++||||++++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG   80 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence            358999999999998643   35688998854332  23468889999999999999999997765 5678999999999


Q ss_pred             CHHHhhcCC---CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------
Q 021659          118 SLKEHLNDP---LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------  188 (309)
Q Consensus       118 sL~~~i~~~---~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------  188 (309)
                      +|.+++...   ....+++..+..++.|++.|+.||   |+.+++|+||||+||+++.++.++++|||++....      
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~  157 (269)
T cd05087          81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHL---HKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV  157 (269)
T ss_pred             cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHH---HHCCEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence            999998642   123567778889999999999999   77899999999999999999999999999885321      


Q ss_pred             ---ccCCCCCCCCCCCCC---------CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcC
Q 021659          189 ---NYATMPHSSCPEDCS---------TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDL  255 (309)
Q Consensus       189 ---~~~~~~~~~~PE~~~---------~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l  255 (309)
                         ...++..|++||...         ..+.++|+||||+++++|++ |..||...........  ...+.......+.+
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~  235 (269)
T cd05087         158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTY--TVREQQLKLPKPRL  235 (269)
T ss_pred             cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHH--HhhcccCCCCCCcc
Confidence               123456799999643         23678999999999999996 9999975443222111  11111122223332


Q ss_pred             CCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHh
Q 021659          256 GGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQ  293 (309)
Q Consensus       256 ~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~  293 (309)
                      ... .+..   +.+++.+|+ .+|++|||+.||+..|+
T Consensus       236 ~~~-~~~~---~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         236 KLP-LSDR---WYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             CCC-CChH---HHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            222 2223   444555998 58999999999998875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=2.3e-36  Score=265.36  Aligned_cols=251  Identities=16%  Similarity=0.221  Sum_probs=191.5

Q ss_pred             cCHHHHHHhhcccc--cccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccC-CCCCcceEeeeEe--
Q 021659           30 FSYKDIKMATDGFH--RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRL-HHRHLLALQGFST--  103 (309)
Q Consensus        30 ~~~~~i~~~~~~~~--~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~--  103 (309)
                      +.++.+.....+|+  +.||+|+||.||++.. ..++.+++|.+.......+.+.+|+.+++.+ +||||+++++++.  
T Consensus         8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   87 (286)
T cd06638           8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKK   87 (286)
T ss_pred             EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeec
Confidence            34455555666665  5899999999999986 4578899998865444456788999999999 6999999999763  


Q ss_pred             ----CCeeEEEEeeCCCCCHHHhhcC--CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCcee
Q 021659          104 ----GRKRLLVFDNIENGSLKEHLND--PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAK  177 (309)
Q Consensus       104 ----~~~~~lv~e~~~~~sL~~~i~~--~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~k  177 (309)
                          +...++||||+++++|.+++..  .....+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++.++
T Consensus        88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~nili~~~~~~k  164 (286)
T cd06638          88 DVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHL---HVNKTIHRDVKGNNILLTTEGGVK  164 (286)
T ss_pred             ccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHH---HhCCccccCCCHHhEEECCCCCEE
Confidence                2457899999999999988753  1245688999999999999999999   778999999999999999999999


Q ss_pred             Eeccccccccc-------ccCCCCCCCCCCCCC-------CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcc
Q 021659          178 LSDVGFFNSVR-------NYATMPHSSCPEDCS-------TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSI  243 (309)
Q Consensus       178 l~dfg~~~~~~-------~~~~~~~~~~PE~~~-------~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~  243 (309)
                      ++|||++....       ...++..|++||...       ..+.++||||||+++++|++|+.||............ ..
T Consensus       165 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~-~~  243 (286)
T cd06638         165 LVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKI-PR  243 (286)
T ss_pred             EccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhc-cc
Confidence            99999986432       234678899999642       2467899999999999999999999765433222211 10


Q ss_pred             cccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHH
Q 021659          244 SSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYL  292 (309)
Q Consensus       244 ~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L  292 (309)
                       ........+.    .   ....+.+++.+||+.||++|||+.|+++.+
T Consensus       244 -~~~~~~~~~~----~---~~~~~~~li~~~l~~~p~~Rps~~ell~~~  284 (286)
T cd06638         244 -NPPPTLHQPE----L---WSNEFNDFIRKCLTKDYEKRPTVSDLLQHV  284 (286)
T ss_pred             -cCCCcccCCC----C---cCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence             0001111111    1   123466777799999999999999998753

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=4.5e-36  Score=261.35  Aligned_cols=239  Identities=18%  Similarity=0.315  Sum_probs=184.2

Q ss_pred             cccccccCCCceEEEEEEcC-C---cEEEEEEeccc--cccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeC
Q 021659           42 FHRIVYTNSHGAAYKARFQD-G---EVALVKEIQAL--NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNI  114 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~-~---~~va~K~~~~~--~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~  114 (309)
                      +.+.||+|+||.||+|.... +   ..|++|.+...  ....+.|..|+.++++++||||+++.+++.+ ...++||||+
T Consensus         8 ~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~   87 (269)
T cd05065           8 IEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFM   87 (269)
T ss_pred             EEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecC
Confidence            45789999999999999642 3   36999988543  2234579999999999999999999997755 6678999999


Q ss_pred             CCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccccC---
Q 021659          115 ENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYA---  191 (309)
Q Consensus       115 ~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~~---  191 (309)
                      ++++|.+++... ...+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++.++++|||++.......   
T Consensus        88 ~~~~L~~~l~~~-~~~~~~~~~~~i~~~l~~al~~l---H~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~  163 (269)
T cd05065          88 ENGALDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYL---SEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP  163 (269)
T ss_pred             CCCcHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHH---HHCCEeecccChheEEEcCCCcEEECCCccccccccCcccc
Confidence            999999998753 35689999999999999999999   77899999999999999999999999999876432211   


Q ss_pred             ---------CCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCC
Q 021659          192 ---------TMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSY  259 (309)
Q Consensus       192 ---------~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  259 (309)
                               .+..|++||...  ..+.++||||||++++|+++ |..||...... ............     + .... 
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~-~~~~~i~~~~~~-----~-~~~~-  235 (269)
T cd05065         164 TYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-DVINAIEQDYRL-----P-PPMD-  235 (269)
T ss_pred             ccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH-HHHHHHHcCCcC-----C-Cccc-
Confidence                     123689999754  34778999999999999886 99998654322 111111110000     1 0111 


Q ss_pred             CHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhh
Q 021659          260 DSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNE  295 (309)
Q Consensus       260 ~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~  295 (309)
                         ....+.+++.+||..+|++||++.+++..|+++
T Consensus       236 ---~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         236 ---CPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             ---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence               124456777799999999999999999999865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=1.4e-36  Score=269.32  Aligned_cols=245  Identities=18%  Similarity=0.252  Sum_probs=188.6

Q ss_pred             cccccccCCCceEEEEEE--------cCCcEEEEEEeccc--cccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEE
Q 021659           42 FHRIVYTNSHGAAYKARF--------QDGEVALVKEIQAL--NLEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLL  109 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~--------~~~~~va~K~~~~~--~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~l  109 (309)
                      +.+.||+|+||.||+++.        .++..+++|.+...  ....+.+.+|+.+++.+ +||||+++++++.. ...++
T Consensus        19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l   98 (304)
T cd05101          19 LGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV   98 (304)
T ss_pred             ecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEE
Confidence            446899999999999974        12457899988533  22345788999999999 79999999997765 66789


Q ss_pred             EEeeCCCCCHHHhhcCCC--------------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCc
Q 021659          110 VFDNIENGSLKEHLNDPL--------------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFT  175 (309)
Q Consensus       110 v~e~~~~~sL~~~i~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~  175 (309)
                      +|||+++++|.+++....              ...+++..+..++.|++.||.||   |+++++|+||||+||+++.++.
T Consensus        99 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~L---H~~givH~dlkp~Nili~~~~~  175 (304)
T cd05101          99 IVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYL---ASQKCIHRDLAARNVLVTENNV  175 (304)
T ss_pred             EEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHH---HHCCeeecccccceEEEcCCCc
Confidence            999999999999986521              23578889999999999999999   7789999999999999999999


Q ss_pred             eeEecccccccccc---------cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcc
Q 021659          176 AKLSDVGFFNSVRN---------YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSI  243 (309)
Q Consensus       176 ~kl~dfg~~~~~~~---------~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~  243 (309)
                      +||+|||++.....         ..++..|+|||....  .+.++||||||+++|++++ |..||.... ..........
T Consensus       176 ~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-~~~~~~~~~~  254 (304)
T cd05101         176 MKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLKE  254 (304)
T ss_pred             EEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC-HHHHHHHHHc
Confidence            99999999864421         223457999996533  4788999999999999998 788886432 2222222211


Q ss_pred             cccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcccc
Q 021659          244 SSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQC  300 (309)
Q Consensus       244 ~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~  300 (309)
                      ...      ...    .......+.+++.+||+.+|++|||+.|+++.|++.+...+
T Consensus       255 ~~~------~~~----~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~~  301 (304)
T cd05101         255 GHR------MDK----PANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLTT  301 (304)
T ss_pred             CCc------CCC----CCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhhh
Confidence            110      001    11123456667779999999999999999999998877654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=3.9e-36  Score=259.87  Aligned_cols=233  Identities=20%  Similarity=0.234  Sum_probs=180.8

Q ss_pred             cccccCCCceEEEEEEcCCc-----------EEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEe
Q 021659           44 RIVYTNSHGAAYKARFQDGE-----------VALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFD  112 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~-----------~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e  112 (309)
                      +.||+|+||.||+|...+..           .+++|.+.........+.+|+.++++++||||+++++++.....++|+|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e   80 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVRDENIMVEE   80 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEecCCcEEEEE
Confidence            36899999999999975432           4778877544433678899999999999999999999776566789999


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCC-------ceeEecccccc
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENF-------TAKLSDVGFFN  185 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~-------~~kl~dfg~~~  185 (309)
                      |+++++|.+++... ...+++..+..++.|++.||.||   |+.+++|+||||+||+++.++       .++++|||++.
T Consensus        81 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~L---H~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~  156 (259)
T cd05037          81 YVKFGPLDVFLHRE-KNNVSLHWKLDVAKQLASALHYL---EDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPI  156 (259)
T ss_pred             cCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHH---hhCCeecccCccceEEEecCccccCCceeEEeCCCCccc
Confidence            99999999999763 22689999999999999999999   788999999999999999887       79999999987


Q ss_pred             ccc---ccCCCCCCCCCCCCC----CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCC
Q 021659          186 SVR---NYATMPHSSCPEDCS----TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGG  257 (309)
Q Consensus       186 ~~~---~~~~~~~~~~PE~~~----~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  257 (309)
                      ...   ...++..|.+||...    ..+.++|+||||++++++++ |..||..... ..........        .... 
T Consensus       157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~-~~~~~~~~~~--------~~~~-  226 (259)
T cd05037         157 TVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS-SEKERFYQDQ--------HRLP-  226 (259)
T ss_pred             ccccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc-hhHHHHHhcC--------CCCC-
Confidence            543   234567899999753    34778999999999999999 5777754421 1111111100        0011 


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHh
Q 021659          258 SYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQ  293 (309)
Q Consensus       258 ~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~  293 (309)
                      ...   ...+.+++.+||..+|.+|||+.++++.|.
T Consensus       227 ~~~---~~~~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         227 MPD---CAELANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             CCC---chHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            111   156667777999999999999999998773

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=3.7e-36  Score=263.38  Aligned_cols=240  Identities=18%  Similarity=0.221  Sum_probs=187.1

Q ss_pred             ccccccCCCceEEEEEEcC-----CcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeC--CeeEEEEee
Q 021659           43 HRIVYTNSHGAAYKARFQD-----GEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTG--RKRLLVFDN  113 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~-----~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~--~~~~lv~e~  113 (309)
                      .+.||+|+||.||+|.+.+     +..|++|.+....  ...+.+.+|+.++++++|+||+++++++..  ...+++++|
T Consensus        11 ~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~~   90 (280)
T cd05043          11 SDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYPY   90 (280)
T ss_pred             eeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEEc
Confidence            4689999999999999755     6788999885332  224568899999999999999999997754  567899999


Q ss_pred             CCCCCHHHhhcCCC------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc
Q 021659          114 IENGSLKEHLNDPL------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV  187 (309)
Q Consensus       114 ~~~~sL~~~i~~~~------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~  187 (309)
                      +++++|.+++....      ...+++..+..++.+++.||.||   |+.+++|+||+|+||++++++.+|++|||+++..
T Consensus        91 ~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~L---H~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~  167 (280)
T cd05043          91 MNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYL---HKRGVIHKDIAARNCVIDEELQVKITDNALSRDL  167 (280)
T ss_pred             CCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHH---HHCCEeecccCHhhEEEcCCCcEEECCCCCcccc
Confidence            99999999986421      15689999999999999999999   7889999999999999999999999999998744


Q ss_pred             cc---------cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcC
Q 021659          188 RN---------YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDL  255 (309)
Q Consensus       188 ~~---------~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l  255 (309)
                      ..         ..++..|++||...  ..+.++||||||++++++++ |+.||...... ..........      ....
T Consensus       168 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-~~~~~~~~~~------~~~~  240 (280)
T cd05043         168 FPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF-EMAAYLKDGY------RLAQ  240 (280)
T ss_pred             cCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH-HHHHHHHcCC------CCCC
Confidence            21         23455799999643  34788999999999999998 99999754322 2221111110      0011


Q ss_pred             CCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhh
Q 021659          256 GGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEV  296 (309)
Q Consensus       256 ~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~  296 (309)
                      ..    .....+.+++.+||..||++|||+.++++.|+++.
T Consensus       241 ~~----~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~  277 (280)
T cd05043         241 PI----NCPDELFAVMACCWALDPEERPSFSQLVQCLTDFH  277 (280)
T ss_pred             CC----cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            11    11235667777999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=7e-36  Score=263.59  Aligned_cols=243  Identities=17%  Similarity=0.246  Sum_probs=184.0

Q ss_pred             ccccccCCCceEEEEEEcC-----------------CcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEe
Q 021659           43 HRIVYTNSHGAAYKARFQD-----------------GEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFST  103 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~-----------------~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~  103 (309)
                      .+.||+|+||.||++...+                 +..||+|.+....  ...+.+.+|++++++++||||+++++++.
T Consensus        10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~   89 (296)
T cd05051          10 VEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCT   89 (296)
T ss_pred             cccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence            3689999999999988532                 2458899885432  23457889999999999999999999776


Q ss_pred             C-CeeEEEEeeCCCCCHHHhhcCCC---------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC
Q 021659          104 G-RKRLLVFDNIENGSLKEHLNDPL---------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN  173 (309)
Q Consensus       104 ~-~~~~lv~e~~~~~sL~~~i~~~~---------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~  173 (309)
                      . ...++++|++++++|.+++....         ...+++..+..++.+++.||.||   |+.+++|+||||+||+++.+
T Consensus        90 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~L---H~~~i~H~dlkp~Nili~~~  166 (296)
T cd05051          90 VDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYL---ESLNFVHRDLATRNCLVGKN  166 (296)
T ss_pred             cCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHH---HHcCccccccchhceeecCC
Confidence            5 67889999999999999986521         12689999999999999999999   77899999999999999999


Q ss_pred             CceeEeccccccccc---------ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh--CCCCCCCCccHHH--HH
Q 021659          174 FTAKLSDVGFFNSVR---------NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT--GQSPEEGDVDLIQ--WI  238 (309)
Q Consensus       174 ~~~kl~dfg~~~~~~---------~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t--g~~p~~~~~~~~~--~~  238 (309)
                      +.++++|||++....         ...++..|++||...  ..+.++||||||+++|+|++  +..||........  ..
T Consensus       167 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~  246 (296)
T cd05051         167 YTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENA  246 (296)
T ss_pred             CceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHH
Confidence            999999999986432         123456799999643  35789999999999999998  6778764332211  11


Q ss_pred             HHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhh
Q 021659          239 QESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQN  294 (309)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~  294 (309)
                      ........      .............++.+++.+||+.||++|||+.||++.|++
T Consensus       247 ~~~~~~~~------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~  296 (296)
T cd05051         247 GHFFRDDG------RQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR  296 (296)
T ss_pred             Hhcccccc------ccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence            11100000      000000111123567778889999999999999999999863

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=1.8e-36  Score=265.57  Aligned_cols=247  Identities=21%  Similarity=0.285  Sum_probs=189.7

Q ss_pred             CHHHHHHhhcccc--cccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccC-CCCCcceEeeeEe---
Q 021659           31 SYKDIKMATDGFH--RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRL-HHRHLLALQGFST---  103 (309)
Q Consensus        31 ~~~~i~~~~~~~~--~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~---  103 (309)
                      ++.++..+.+.|+  +.+|+|+||.||+|.. .+++.+|+|.+.........+..|+.+++++ +|+|++++++++.   
T Consensus         7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~   86 (282)
T cd06636           7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKS   86 (282)
T ss_pred             hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhccc
Confidence            3444444444454  5899999999999997 4578999998866555556788999999999 6999999999763   


Q ss_pred             ----CCeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEe
Q 021659          104 ----GRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLS  179 (309)
Q Consensus       104 ----~~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~  179 (309)
                          ....+++|||+++++|.+++.......+++..+..++.|++.|+.||   |+.+++|+||+|+||+++.++.++|+
T Consensus        87 ~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~L---H~~~ivH~dl~~~nili~~~~~~~l~  163 (282)
T cd06636          87 PPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHL---HAHKVIHRDIKGQNVLLTENAEVKLV  163 (282)
T ss_pred             ccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCEEEe
Confidence                24678999999999999999764456688889999999999999999   77899999999999999999999999


Q ss_pred             ccccccccc-------ccCCCCCCCCCCCCC-------CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccc
Q 021659          180 DVGFFNSVR-------NYATMPHSSCPEDCS-------TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISS  245 (309)
Q Consensus       180 dfg~~~~~~-------~~~~~~~~~~PE~~~-------~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~  245 (309)
                      |||++....       ...++..|.+||...       ..+.++|+||||+++|+|++|..||........... ..   
T Consensus       164 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~-~~---  239 (282)
T cd06636         164 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFL-IP---  239 (282)
T ss_pred             eCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhh-Hh---
Confidence            999876432       234677899999643       246789999999999999999999975433222111 10   


Q ss_pred             cccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          246 SIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       246 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                         ....+.....   .....+.+++.+||..||.+||++.|+++
T Consensus       240 ---~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         240 ---RNPPPKLKSK---KWSKKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             ---hCCCCCCccc---ccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence               0011111111   12345667777999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=2.8e-36  Score=264.35  Aligned_cols=237  Identities=21%  Similarity=0.307  Sum_probs=182.2

Q ss_pred             ccccccCCCceEEEEEE------cCCcEEEEEEecccc-ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeC
Q 021659           43 HRIVYTNSHGAAYKARF------QDGEVALVKEIQALN-LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNI  114 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~------~~~~~va~K~~~~~~-~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~  114 (309)
                      .+.||+|+||.||++..      .++..+++|.+.... ...+.+.+|+++++.++|+||+++++++.+ ...++++||+
T Consensus        10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   89 (280)
T cd05092          10 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYM   89 (280)
T ss_pred             ccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEecC
Confidence            46899999999999974      235678888875332 234578999999999999999999997765 5678999999


Q ss_pred             CCCCHHHhhcCCC-------------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecc
Q 021659          115 ENGSLKEHLNDPL-------------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDV  181 (309)
Q Consensus       115 ~~~sL~~~i~~~~-------------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~df  181 (309)
                      ++++|.+++....             ...+++..+..++.|++.|++||   |+.+++|+||+|+||+++.++.++|+||
T Consensus        90 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~L---H~~~i~H~dlkp~nil~~~~~~~kL~df  166 (280)
T cd05092          90 RHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYL---ASLHFVHRDLATRNCLVGQGLVVKIGDF  166 (280)
T ss_pred             CCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHH---HHCCeecccccHhhEEEcCCCCEEECCC
Confidence            9999999986421             13588999999999999999999   7889999999999999999999999999


Q ss_pred             ccccccc---------ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccc
Q 021659          182 GFFNSVR---------NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHR  249 (309)
Q Consensus       182 g~~~~~~---------~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~  249 (309)
                      |++....         ...++..|++||...  ..+.++||||||+++|+|++ |..||........ .........   
T Consensus       167 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~-~~~~~~~~~---  242 (280)
T cd05092         167 GMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA-IECITQGRE---  242 (280)
T ss_pred             CceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH-HHHHHcCcc---
Confidence            9886432         112356799999643  34788999999999999998 8999865433221 111111100   


Q ss_pred             cccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHh
Q 021659          250 MIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQ  293 (309)
Q Consensus       250 ~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~  293 (309)
                         .......    ...+.+++.+||+.||++||++.+|++.|+
T Consensus       243 ---~~~~~~~----~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         243 ---LERPRTC----PPEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             ---CCCCCCC----CHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence               1111111    234557777999999999999999999886

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=4.1e-36  Score=265.55  Aligned_cols=233  Identities=18%  Similarity=0.262  Sum_probs=184.7

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc-ccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN-LEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~-~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL~  120 (309)
                      +.||+|++|.||++.. .+++.+++|.+.... ...+.+.+|+.+++.++|+|++++++.+. ....++||||+++++|.
T Consensus        26 ~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~  105 (296)
T cd06654          26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT  105 (296)
T ss_pred             EEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCHH
Confidence            5799999999999986 467899999885433 33467889999999999999999999664 47888999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccCCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYATM  193 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~~~  193 (309)
                      +++..   ..+++.++..++.+++.||.||   |+.+++|+||+|+||+++.++.++|+|||++....       ...++
T Consensus       106 ~~~~~---~~~~~~~~~~i~~ql~~aL~~L---H~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  179 (296)
T cd06654         106 DVVTE---TCMDEGQIAAVCRECLQALEFL---HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGT  179 (296)
T ss_pred             HHHHh---cCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEEcCCCCEEECccccchhccccccccCcccCC
Confidence            99864   5688999999999999999999   78899999999999999999999999999876432       23567


Q ss_pred             CCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHH
Q 021659          194 PHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVA  271 (309)
Q Consensus       194 ~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~  271 (309)
                      +.|++||....  .+.++||||||+++|+|++|+.||.............. .. .     +.+.  ........+.+++
T Consensus       180 ~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~-~~-~-----~~~~--~~~~~~~~l~~li  250 (296)
T cd06654         180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-NG-T-----PELQ--NPEKLSAIFRDFL  250 (296)
T ss_pred             ccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhc-CC-C-----CCCC--CccccCHHHHHHH
Confidence            78999996533  46899999999999999999999976544332222111 10 0     0110  0111234566777


Q ss_pred             HHccCCCCCCCCChHHHHHH
Q 021659          272 RLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       272 ~~cl~~dp~~Rps~~evl~~  291 (309)
                      .+||.++|++||++.+++..
T Consensus       251 ~~~l~~~p~~Rpt~~eil~~  270 (296)
T cd06654         251 NRCLDMDVEKRGSAKELLQH  270 (296)
T ss_pred             HHHCcCCcccCcCHHHHhhC
Confidence            79999999999999999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=1.5e-36  Score=266.33  Aligned_cols=249  Identities=18%  Similarity=0.269  Sum_probs=182.7

Q ss_pred             ccccccCCCceEEEEEE-----cCCcEEEEEEeccccc-cHHHHHHHHHHHccCCCCCcceEeeeEeC---CeeEEEEee
Q 021659           43 HRIVYTNSHGAAYKARF-----QDGEVALVKEIQALNL-EKDAFYREIQLLGRLHHRHLLALQGFSTG---RKRLLVFDN  113 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-----~~~~~va~K~~~~~~~-~~~~~~~ei~~l~~l~h~niv~~~~~~~~---~~~~lv~e~  113 (309)
                      .+.||+|+||.||++..     .++..|++|.+..... ..+.+.+|++++++++||||+++.+++..   ...++|+||
T Consensus         9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~   88 (284)
T cd05081           9 IQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEY   88 (284)
T ss_pred             eeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEe
Confidence            36799999999999974     2578899999864432 24578899999999999999999997642   457799999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccccc---
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNY---  190 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~---  190 (309)
                      +++++|.+++... ...+++..+..++.+++.||.||   |+.+++||||||+||+++.++.++|+|||++......   
T Consensus        89 ~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~aL~~L---H~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~  164 (284)
T cd05081          89 LPYGSLRDYLQKH-RERLDHRKLLLYASQICKGMEYL---GSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEY  164 (284)
T ss_pred             cCCCCHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHH---HHCCceeccCCHhhEEECCCCeEEECCCcccccccCCCcc
Confidence            9999999998642 34689999999999999999999   7889999999999999999999999999998754321   


Q ss_pred             -------CCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHH-HHHhccccc----ccccccCcCC
Q 021659          191 -------ATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQW-IQESSISSS----IHRMIDPDLG  256 (309)
Q Consensus       191 -------~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~-~~~~~~~~~----~~~~~~~~l~  256 (309)
                             .++..|.+||...+  .+.++|+||||++++||++|..|+......... .........    ..+.......
T Consensus       165 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (284)
T cd05081         165 YKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGR  244 (284)
T ss_pred             eeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCc
Confidence                   12234889996533  478899999999999999988775433211100 000000000    0000000000


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhh
Q 021659          257 GSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNE  295 (309)
Q Consensus       257 ~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~  295 (309)
                      ..........+.+++.+||..+|+.|||+.||++.|+.+
T Consensus       245 ~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         245 LPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            000111234567777799999999999999999999853

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=3.5e-36  Score=264.59  Aligned_cols=234  Identities=17%  Similarity=0.261  Sum_probs=182.0

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccccc----HHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLE----KDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~----~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||++... +++.||+|.+......    .+.+..|+.++++++|+|++.+++.+. +...++||||++++
T Consensus         6 ~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~   85 (285)
T cd05630           6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGG   85 (285)
T ss_pred             EEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCCC
Confidence            57999999999999974 5889999988543221    235678999999999999999998665 47788999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------ccC
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------NYA  191 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------~~~  191 (309)
                      +|.+++.......+++..+..++.|++.||.||   |+.+++|+||+|+||+++.++.++++|||++....      ...
T Consensus        86 ~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~l---H~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~  162 (285)
T cd05630          86 DLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDL---HQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV  162 (285)
T ss_pred             cHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccCCC
Confidence            999988654445799999999999999999999   78899999999999999999999999999886432      235


Q ss_pred             CCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHH--HHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          192 TMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQ--WIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       192 ~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ++..|+|||....  .+.++||||||+++|+|++|+.||........  .......  ..    ........    ...+
T Consensus       163 g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~--~~----~~~~~~~~----~~~~  232 (285)
T cd05630         163 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK--EV----QEEYSEKF----SPDA  232 (285)
T ss_pred             CCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhh--hh----hhhcCccC----CHHH
Confidence            6789999997543  47889999999999999999999976432111  0111000  00    01111111    2345


Q ss_pred             HHHHHHccCCCCCCCCC-----hHHHHH
Q 021659          268 LAVARLCIKTKDKPTIS-----IPQISR  290 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps-----~~evl~  290 (309)
                      .+++.+||+.||+.|||     +.|+++
T Consensus       233 ~~li~~~l~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         233 RSLCKMLLCKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             HHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence            56666999999999999     788885

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=2e-36  Score=271.30  Aligned_cols=228  Identities=18%  Similarity=0.240  Sum_probs=176.4

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||+++.. +++.||+|++....    ...+.+..|+.++.++ +||||+.+++++.+ ...++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            36899999999999974 57899999996432    2234578899999888 59999999997654 678899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc-------cc
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-------RN  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-------~~  189 (309)
                      ++|..++..  ...+++..+..++.|++.||.||   |+++++||||||+||+++.++.+||+|||++...       ..
T Consensus        81 ~~L~~~~~~--~~~l~~~~~~~~~~qi~~al~~l---H~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~  155 (327)
T cd05617          81 GDLMFHMQR--QRKLPEEHARFYAAEICIALNFL---HERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTST  155 (327)
T ss_pred             CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceec
Confidence            999998875  46799999999999999999999   7789999999999999999999999999988642       12


Q ss_pred             cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCc-----cHHHHHHHhcccccccccccCcCCCCCCHH
Q 021659          190 YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDV-----DLIQWIQESSISSSIHRMIDPDLGGSYDSK  262 (309)
Q Consensus       190 ~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  262 (309)
                      ..+++.|+|||...  ..+.++||||||+++|+|++|..||....     ..............      ..++...   
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~------~~~p~~~---  226 (327)
T cd05617         156 FCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKP------IRIPRFL---  226 (327)
T ss_pred             ccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCC------CCCCCCC---
Confidence            35788999999753  34788999999999999999999995321     11111111111110      1111111   


Q ss_pred             HHHHHHHHHHHccCCCCCCCCChH
Q 021659          263 ELKKLLAVARLCIKTKDKPTISIP  286 (309)
Q Consensus       263 ~~~~l~~l~~~cl~~dp~~Rps~~  286 (309)
                       ...+.+++.+||+.||++|+++.
T Consensus       227 -~~~~~~li~~~L~~dP~~R~~~~  249 (327)
T cd05617         227 -SVKASHVLKGFLNKDPKERLGCQ  249 (327)
T ss_pred             -CHHHHHHHHHHhccCHHHcCCCC
Confidence             23445666699999999999853

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=5.3e-36  Score=258.80  Aligned_cols=236  Identities=20%  Similarity=0.223  Sum_probs=185.6

Q ss_pred             cccccccCCCceEEEEEEc-CCcEEEEEEeccc--cccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCC
Q 021659           42 FHRIVYTNSHGAAYKARFQ-DGEVALVKEIQAL--NLEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENG  117 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~--~~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~  117 (309)
                      +.+.||+|++|.||++... ++..+++|.+...  ....+.+.+|+.+++.++|+||+++++.+. +...++++||++++
T Consensus         4 ~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   83 (255)
T cd08219           4 VLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGG   83 (255)
T ss_pred             EEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCC
Confidence            3468999999999999974 5788999988532  223467889999999999999999999665 47888999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------cc
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NY  190 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~  190 (309)
                      +|.+++.......+++..+..++.+++.||.+|   |+.+++|+||+|+||+++.++.++++|||.+....       ..
T Consensus        84 ~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~l---H~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~  160 (255)
T cd08219          84 DLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHI---HEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTY  160 (255)
T ss_pred             cHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---hhCCcccCCCCcceEEECCCCcEEEcccCcceeecccccccccc
Confidence            999988654456789999999999999999999   88899999999999999999999999999986443       23


Q ss_pred             CCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHH
Q 021659          191 ATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL  268 (309)
Q Consensus       191 ~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~  268 (309)
                      .++..|+|||....  .+.++|+||||+++++|++|+.||...... ....... .+...     .+....    ...+.
T Consensus       161 ~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~-~~~~~~~-~~~~~-----~~~~~~----~~~~~  229 (255)
T cd08219         161 VGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWK-NLILKVC-QGSYK-----PLPSHY----SYELR  229 (255)
T ss_pred             cCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHH-HHHHHHh-cCCCC-----CCCccc----CHHHH
Confidence            56778999997533  478899999999999999999999754321 1111111 11111     111111    23455


Q ss_pred             HHHHHccCCCCCCCCChHHHHHH
Q 021659          269 AVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       269 ~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      +++.+||+.||++|||+.+++..
T Consensus       230 ~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         230 SLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             HHHHHHHhCCcccCCCHHHHhhc
Confidence            67779999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=4.4e-36  Score=261.38  Aligned_cols=239  Identities=21%  Similarity=0.205  Sum_probs=176.8

Q ss_pred             ccccCCCceEEEEEEcC---CcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCC
Q 021659           45 IVYTNSHGAAYKARFQD---GEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGS  118 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~~---~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~s  118 (309)
                      .||+|+||.||+|...+   ...+++|.+.....  ....+.+|++.++.++|+||+++++.+.. ...++||||+++|+
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD   81 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence            58999999999997533   34678887643322  23467899999999999999999997764 66789999999999


Q ss_pred             HHHhhcCCC---CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------
Q 021659          119 LKEHLNDPL---KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------  188 (309)
Q Consensus       119 L~~~i~~~~---~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------  188 (309)
                      |.+++....   ....++..+..++.|++.||+||   |+.+++||||||+||+++.++.+||+|||++....       
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~  158 (269)
T cd05042          82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWL---HQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT  158 (269)
T ss_pred             HHHHHHhccccccccccHHHHHHHHHHHHHHHHHH---HhcCEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence            999986532   23456778899999999999999   78899999999999999999999999999875321       


Q ss_pred             --ccCCCCCCCCCCCCC---------CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCC
Q 021659          189 --NYATMPHSSCPEDCS---------TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLG  256 (309)
Q Consensus       189 --~~~~~~~~~~PE~~~---------~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  256 (309)
                        ...++..|++||...         ..+.++||||||+++|+|++ |..||............. . .....+..+.+.
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~-~-~~~~~~~~~~~~  236 (269)
T cd05042         159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVV-R-EQDIKLPKPQLD  236 (269)
T ss_pred             cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHh-h-ccCccCCCCccc
Confidence              113345699999632         23678999999999999999 788887654332221111 1 111122223222


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHh
Q 021659          257 GSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQ  293 (309)
Q Consensus       257 ~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~  293 (309)
                      ...    ...+.+++..|+ .||++|||+.+|++.|.
T Consensus       237 ~~~----~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         237 LKY----SDRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             ccC----CHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence            222    233445556888 59999999999999873

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=2.4e-36  Score=270.28  Aligned_cols=226  Identities=18%  Similarity=0.202  Sum_probs=176.1

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEeeCC
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFDNIE  115 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e~~~  115 (309)
                      .+.||+|+||.||+|... ++..||+|.+....    ...+.+..|..++..+ +|++|+.+++++.. ...++||||++
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~   84 (323)
T cd05616           5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVN   84 (323)
T ss_pred             EEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCC
Confidence            468999999999999975 46899999985432    1223567788888777 58889999987654 67889999999


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------  188 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------  188 (309)
                      +|+|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....       
T Consensus        85 ~g~L~~~~~~--~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~  159 (323)
T cd05616          85 GGDLMYQIQQ--VGRFKEPHAVFYAAEIAIGLFFL---HSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTK  159 (323)
T ss_pred             CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCccc
Confidence            9999999876  46789999999999999999999   77899999999999999999999999999986432       


Q ss_pred             ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          189 NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       189 ~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                      ...+++.|+|||....  .+.++|+|||||++|+|++|+.||....... ........ .      ...+..    ....
T Consensus       160 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~-~~~~i~~~-~------~~~p~~----~s~~  227 (323)
T cd05616         160 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE-LFQSIMEH-N------VAYPKS----MSKE  227 (323)
T ss_pred             cCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHH-HHHHHHhC-C------CCCCCc----CCHH
Confidence            2357889999996543  4789999999999999999999997653321 11111110 0      111111    1234


Q ss_pred             HHHHHHHccCCCCCCCCCh
Q 021659          267 LLAVARLCIKTKDKPTISI  285 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rps~  285 (309)
                      +.+++.+||+.||+.|++.
T Consensus       228 ~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         228 AVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             HHHHHHHHcccCHHhcCCC
Confidence            5566779999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.5e-36  Score=276.60  Aligned_cols=236  Identities=17%  Similarity=0.157  Sum_probs=177.3

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCHHH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLKE  121 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL~~  121 (309)
                      +.||+|+||.||++.. ..++.||+|...     .+.+.+|++++++|+||||+++++++. +...++|+|++. ++|.+
T Consensus        98 ~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-----~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~~  171 (391)
T PHA03212         98 ETFTPGAEGFAFACIDNKTCEHVVIKAGQ-----RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDLYC  171 (391)
T ss_pred             EEEcCCCCeEEEEEEECCCCCEEEEechh-----hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCHHH
Confidence            5899999999999996 457899999643     345788999999999999999999665 467789999986 58988


Q ss_pred             hhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc--------ccCCC
Q 021659          122 HLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR--------NYATM  193 (309)
Q Consensus       122 ~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~--------~~~~~  193 (309)
                      ++..  ...+++..++.++.|++.||.||   |+.+|+||||||+||+++.++.+||+|||++....        ...+|
T Consensus       172 ~l~~--~~~l~~~~~~~i~~qi~~aL~yl---H~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt  246 (391)
T PHA03212        172 YLAA--KRNIAICDILAIERSVLRAIQYL---HENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGT  246 (391)
T ss_pred             HHHh--cCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccccCc
Confidence            8876  46789999999999999999999   77899999999999999999999999999985321        23578


Q ss_pred             CCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccH---------HHHHHHhcc--ccc--------cccc--
Q 021659          194 PHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDL---------IQWIQESSI--SSS--------IHRM--  250 (309)
Q Consensus       194 ~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~---------~~~~~~~~~--~~~--------~~~~--  250 (309)
                      +.|+|||....  .++++|||||||++|+|++|+.||......         ...+.....  ...        ....  
T Consensus       247 ~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~  326 (391)
T PHA03212        247 IATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYI  326 (391)
T ss_pred             cCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHH
Confidence            99999997533  478899999999999999999886432110         000000000  000        0000  


Q ss_pred             -------ccCcCCCCCC--HHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          251 -------IDPDLGGSYD--SKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       251 -------~~~~l~~~~~--~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                             ..+.....+.  .....++.+++.+||..||++|||+.|+++
T Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~  375 (391)
T PHA03212        327 GLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD  375 (391)
T ss_pred             HHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence                   0000000000  112346777888999999999999999984

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=5.8e-36  Score=260.15  Aligned_cols=233  Identities=19%  Similarity=0.278  Sum_probs=183.3

Q ss_pred             cccccccCCCceEEEEEE-cCCcEEEEEEecccccc----------HHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEE
Q 021659           42 FHRIVYTNSHGAAYKARF-QDGEVALVKEIQALNLE----------KDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLL  109 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~----------~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~l  109 (309)
                      +...||+|++|.||+|.. .+++.+|+|.+......          .+.+.+|++++++++||||+++++++.+ ...++
T Consensus         4 ~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (267)
T cd06628           4 KGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLNI   83 (267)
T ss_pred             ccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEE
Confidence            346899999999999986 45788999988533221          1357889999999999999999997654 67789


Q ss_pred             EEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc
Q 021659          110 VFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN  189 (309)
Q Consensus       110 v~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~  189 (309)
                      ++||+++++|.+++..  ...+++..+..++.+++.||.+|   |+.+++||||+|+||+++.++.++|+|||.+.....
T Consensus        84 v~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~l---H~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~  158 (267)
T cd06628          84 FLEYVPGGSVAALLNN--YGAFEETLVRNFVRQILKGLNYL---HNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEA  158 (267)
T ss_pred             EEEecCCCCHHHHHHh--ccCccHHHHHHHHHHHHHHHHHH---HhcCcccccCCHHHEEEcCCCCEEecccCCCccccc
Confidence            9999999999999976  46788999999999999999999   778999999999999999999999999998764431


Q ss_pred             -------------cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCc
Q 021659          190 -------------YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPD  254 (309)
Q Consensus       190 -------------~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (309)
                                   ..++..|.+||....  .+.++|+||||+++++|++|+.||........... ..      ....+.
T Consensus       159 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~-~~------~~~~~~  231 (267)
T cd06628         159 NSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFK-IG------ENASPE  231 (267)
T ss_pred             ccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHH-Hh------ccCCCc
Confidence                         235678999997543  46789999999999999999999986543322111 10      011122


Q ss_pred             CCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          255 LGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       255 l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      +...    ....+.+++.+||+.||++||++.++++
T Consensus       232 ~~~~----~~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         232 IPSN----ISSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             CCcc----cCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence            2211    2345556667999999999999999885

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=3.9e-36  Score=261.50  Aligned_cols=238  Identities=16%  Similarity=0.324  Sum_probs=185.0

Q ss_pred             ccccccCCCceEEEEEEc-CC---cEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCC
Q 021659           43 HRIVYTNSHGAAYKARFQ-DG---EVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIE  115 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~---~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~  115 (309)
                      .+.||+|++|.||+|... ++   ..+++|.+....  ...+.+..|++++++++|+|++++.+++.+ ...++||||++
T Consensus        10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   89 (268)
T cd05063          10 QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYME   89 (268)
T ss_pred             eeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcCC
Confidence            468999999999999964 23   368999885432  224578899999999999999999997765 67789999999


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccccc-----
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNY-----  190 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~-----  190 (309)
                      +++|.+++... ...+++..+..++.+++.|+.||   |+.+++|+||+|+||+++.++.++++|||++......     
T Consensus        90 ~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~al~~l---H~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~  165 (268)
T cd05063          90 NGALDKYLRDH-DGEFSSYQLVGMLRGIAAGMKYL---SDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTY  165 (268)
T ss_pred             CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccccchhhEEEcCCCcEEECCCccceecccccccce
Confidence            99999998652 35689999999999999999999   7789999999999999999999999999988644321     


Q ss_pred             -----CCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHH
Q 021659          191 -----ATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSK  262 (309)
Q Consensus       191 -----~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  262 (309)
                           ..+..|++||...  ..+.++||||||+++|++++ |+.||...... ...........     .+.     ..+
T Consensus       166 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~-~~~~~i~~~~~-----~~~-----~~~  234 (268)
T cd05063         166 TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH-EVMKAINDGFR-----LPA-----PMD  234 (268)
T ss_pred             eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH-HHHHHHhcCCC-----CCC-----CCC
Confidence                 1124689999643  34788999999999999997 99998654322 11111111100     011     111


Q ss_pred             HHHHHHHHHHHccCCCCCCCCChHHHHHHHhhh
Q 021659          263 ELKKLLAVARLCIKTKDKPTISIPQISRYLQNE  295 (309)
Q Consensus       263 ~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~  295 (309)
                      ....+.+++.+||..+|++||++.++++.|+++
T Consensus       235 ~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         235 CPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            234567888899999999999999999999865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=3.5e-36  Score=267.48  Aligned_cols=242  Identities=15%  Similarity=0.185  Sum_probs=180.3

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL  119 (309)
                      +.||+|+||.||+|+.. +++.||+|.+....  .....+.+|++++++++||||+++++++. +...++||||+++ +|
T Consensus        12 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l   90 (309)
T cd07872          12 EKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDK-DL   90 (309)
T ss_pred             EEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCCC-CH
Confidence            57999999999999964 57889999885332  22346788999999999999999999775 4678899999986 88


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYAT  192 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~~  192 (309)
                      .+++... ...+++..+..++.|++.||.||   |+.+++||||+|+||+++.++.+||+|||++....       ...+
T Consensus        91 ~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~l---H~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~  166 (309)
T cd07872          91 KQYMDDC-GNIMSMHNVKIFLYQILRGLAYC---HRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVV  166 (309)
T ss_pred             HHHHHhc-CCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEECCCCCEEECccccceecCCCccccccccc
Confidence            8887643 34588999999999999999999   78899999999999999999999999999986432       2346


Q ss_pred             CCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHH--HHHhc---ccccccccc---------cCcC
Q 021659          193 MPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQW--IQESS---ISSSIHRMI---------DPDL  255 (309)
Q Consensus       193 ~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~--~~~~~---~~~~~~~~~---------~~~l  255 (309)
                      +..|++||...   ..+.++||||||+++++|++|+.||.+.......  +....   .....+.+.         .+..
T Consensus       167 ~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (309)
T cd07872         167 TLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKY  246 (309)
T ss_pred             cccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCcc
Confidence            78899999643   2477899999999999999999999765322111  11000   000000000         0000


Q ss_pred             CCC----CCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          256 GGS----YDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       256 ~~~----~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ...    .......++.+++.+||+.||++|||+.|++.
T Consensus       247 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~  285 (309)
T cd07872         247 KPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK  285 (309)
T ss_pred             CCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence            000    00011234566777999999999999999985

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=3.3e-36  Score=261.98  Aligned_cols=237  Identities=20%  Similarity=0.283  Sum_probs=182.5

Q ss_pred             cccccCCCceEEEEEEcC-------CcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEee
Q 021659           44 RIVYTNSHGAAYKARFQD-------GEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~-------~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      +.||+|++|.||+|+..+       +..+++|.+....  .....+.+|+++++.++||||+++++++.. ...++||||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            358999999999998632       2578889875433  234578899999999999999999997754 677899999


Q ss_pred             CCCCCHHHhhcCC-----CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCC-----ceeEecccc
Q 021659          114 IENGSLKEHLNDP-----LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENF-----TAKLSDVGF  183 (309)
Q Consensus       114 ~~~~sL~~~i~~~-----~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~-----~~kl~dfg~  183 (309)
                      +++++|.+++...     ....+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++     .++++|||+
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---H~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~  157 (269)
T cd05044          81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYL---EQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL  157 (269)
T ss_pred             cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHH---HhCCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence            9999999998642     134578899999999999999999   778999999999999999877     899999998


Q ss_pred             ccccc---------ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccc
Q 021659          184 FNSVR---------NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMI  251 (309)
Q Consensus       184 ~~~~~---------~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~  251 (309)
                      +....         ....+..|++||...  ..+.++||||||+++|+|++ |+.||........ ..... ....    
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~-~~~~~-~~~~----  231 (269)
T cd05044         158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEV-LQHVT-AGGR----  231 (269)
T ss_pred             ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHH-HHHHh-cCCc----
Confidence            75432         123456799999643  34788999999999999998 9999975443221 11111 1100    


Q ss_pred             cCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhh
Q 021659          252 DPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQN  294 (309)
Q Consensus       252 ~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~  294 (309)
                       ...    .......+.+++.+||..+|++||++.++++.|++
T Consensus       232 -~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  269 (269)
T cd05044         232 -LQK----PENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN  269 (269)
T ss_pred             -cCC----cccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence             011    11123456677779999999999999999999874

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=1.9e-36  Score=265.29  Aligned_cols=249  Identities=16%  Similarity=0.266  Sum_probs=186.7

Q ss_pred             ccccccCCCceEEEEEEc-----CCcEEEEEEecccccc--HHHHHHHHHHHccCCCCCcceEeeeEeC---CeeEEEEe
Q 021659           43 HRIVYTNSHGAAYKARFQ-----DGEVALVKEIQALNLE--KDAFYREIQLLGRLHHRHLLALQGFSTG---RKRLLVFD  112 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-----~~~~va~K~~~~~~~~--~~~~~~ei~~l~~l~h~niv~~~~~~~~---~~~~lv~e  112 (309)
                      .+.||+|+||.||++++.     ++..+|+|.+......  .+.+.+|+++++.++|+||+++++++..   ...+++||
T Consensus         9 ~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   88 (284)
T cd05038           9 IKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIME   88 (284)
T ss_pred             heeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEe
Confidence            367999999999999853     3678999999655543  5679999999999999999999998754   35789999


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc---
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN---  189 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~---  189 (309)
                      |+++++|.+++... ...+++..+..++.+++.||.+|   |+.+++|+||+|+||+++.++.++++|||.+.....   
T Consensus        89 ~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~l~~aL~~l---H~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~  164 (284)
T cd05038          89 YLPSGSLRDYLQRH-RDQINLKRLLLFSSQICKGMDYL---GSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKD  164 (284)
T ss_pred             cCCCCCHHHHHHhC-ccccCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCc
Confidence            99999999999753 23589999999999999999999   778999999999999999999999999999875441   


Q ss_pred             -------cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcc----cccccccccCcCC
Q 021659          190 -------YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSI----SSSIHRMIDPDLG  256 (309)
Q Consensus       190 -------~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~  256 (309)
                             ...+..|.+||...  ..+.++||||||+++++|++|..|+...............    .......+.....
T Consensus       165 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (284)
T cd05038         165 YYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGER  244 (284)
T ss_pred             ceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCc
Confidence                   12334588999643  3477899999999999999999997643211100000000    0000000001000


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhh
Q 021659          257 GSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNE  295 (309)
Q Consensus       257 ~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~  295 (309)
                      ..........+.+++.+||+++|++|||+.||++.|+++
T Consensus       245 ~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         245 LPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             CCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            011111224577788899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=1.5e-36  Score=273.75  Aligned_cols=243  Identities=18%  Similarity=0.232  Sum_probs=184.6

Q ss_pred             cccccccCCCceEEEEEE------cCCcEEEEEEeccccc--cHHHHHHHHHHHccC-CCCCcceEeeeEeC--CeeEEE
Q 021659           42 FHRIVYTNSHGAAYKARF------QDGEVALVKEIQALNL--EKDAFYREIQLLGRL-HHRHLLALQGFSTG--RKRLLV  110 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~------~~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l-~h~niv~~~~~~~~--~~~~lv  110 (309)
                      +.+.||+|+||.||+|..      .+++.||+|.+.....  ..+.+.+|++++.++ +|+||+++++++..  ...+++
T Consensus        11 ~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv   90 (343)
T cd05103          11 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI   90 (343)
T ss_pred             ccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEE
Confidence            447899999999999973      3467899999864322  234688999999999 68999999997753  456799


Q ss_pred             EeeCCCCCHHHhhcCCC---------------------------------------------------------------
Q 021659          111 FDNIENGSLKEHLNDPL---------------------------------------------------------------  127 (309)
Q Consensus       111 ~e~~~~~sL~~~i~~~~---------------------------------------------------------------  127 (309)
                      |||+++|+|.+++....                                                               
T Consensus        91 ~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (343)
T cd05103          91 VEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQED  170 (343)
T ss_pred             EeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhh
Confidence            99999999999885321                                                               


Q ss_pred             --CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc---------cCCCCCC
Q 021659          128 --KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN---------YATMPHS  196 (309)
Q Consensus       128 --~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~---------~~~~~~~  196 (309)
                        ...+++..+..++.|+++||+||   |+.+++||||||+||+++.++.+|++|||++.....         ..++..|
T Consensus       171 ~~~~~~~~~~~~~~~~qi~~al~~l---H~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y  247 (343)
T cd05103         171 LYKKVLTLEDLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKW  247 (343)
T ss_pred             hhhccCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcce
Confidence              12467888899999999999999   788999999999999999999999999998864321         1234569


Q ss_pred             CCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHH
Q 021659          197 SCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARL  273 (309)
Q Consensus       197 ~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~  273 (309)
                      ++||...  ..+.++||||||+++++|++ |..||............... +..     ...+. ..   ...+.+++.+
T Consensus       248 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~-----~~~~~-~~---~~~~~~~~~~  317 (343)
T cd05103         248 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE-GTR-----MRAPD-YT---TPEMYQTMLD  317 (343)
T ss_pred             ECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhc-cCC-----CCCCC-CC---CHHHHHHHHH
Confidence            9999643  34788999999999999997 99998754321111111111 100     01111 11   2346677789


Q ss_pred             ccCCCCCCCCChHHHHHHHhhhhc
Q 021659          274 CIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       274 cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                      ||+.+|++|||+.|+++.|+++++
T Consensus       318 cl~~~p~~Rps~~eil~~l~~~~~  341 (343)
T cd05103         318 CWHGEPSQRPTFSELVEHLGNLLQ  341 (343)
T ss_pred             HccCChhhCcCHHHHHHHHHHHHh
Confidence            999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=2.9e-36  Score=264.71  Aligned_cols=238  Identities=17%  Similarity=0.275  Sum_probs=182.6

Q ss_pred             cccccCCCceEEEEEE-----cCCcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC---CeeEEEEee
Q 021659           44 RIVYTNSHGAAYKARF-----QDGEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG---RKRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-----~~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~---~~~~lv~e~  113 (309)
                      +.||+|+||.||++++     .++..||+|.+.....  ..+.+.+|++++++++|||++++.+++.+   ...++||||
T Consensus        10 ~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~   89 (284)
T cd05079          10 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEF   89 (284)
T ss_pred             eecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEEc
Confidence            5799999999999984     3578899999854322  23578999999999999999999997754   356799999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc----
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN----  189 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~----  189 (309)
                      +++++|.+++... ...+++..+..++.+++.||.||   |+++++||||+|+||+++.++.++|+|||++.....    
T Consensus        90 ~~g~~L~~~l~~~-~~~~~~~~~~~i~~~i~~aL~~l---H~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~  165 (284)
T cd05079          90 LPSGSLKEYLPRN-KNKINLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEY  165 (284)
T ss_pred             cCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeecccchheEEEcCCCCEEECCCccccccccCccc
Confidence            9999999998652 24689999999999999999999   788999999999999999999999999998864321    


Q ss_pred             ------cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHH--------------HHHHHhcccccc
Q 021659          190 ------YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLI--------------QWIQESSISSSI  247 (309)
Q Consensus       190 ------~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~--------------~~~~~~~~~~~~  247 (309)
                            ..++..|++||...  ..++++||||||+++++|+++..|+.......              ..........  
T Consensus       166 ~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  243 (284)
T cd05079         166 YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGK--  243 (284)
T ss_pred             eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCc--
Confidence                  23445689999643  34788999999999999999877643221110              0010000000  


Q ss_pred             cccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhh
Q 021659          248 HRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNE  295 (309)
Q Consensus       248 ~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~  295 (309)
                          ......    .....+.+++.+||+.+|++|||+.++++.|++.
T Consensus       244 ----~~~~~~----~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         244 ----RLPRPP----NCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             ----cCCCCC----CCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence                000111    1234677777799999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.5e-36  Score=263.51  Aligned_cols=240  Identities=14%  Similarity=0.205  Sum_probs=187.3

Q ss_pred             ccccccCCCceEEEEEEcC-Cc----EEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCC
Q 021659           43 HRIVYTNSHGAAYKARFQD-GE----VALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIE  115 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~-~~----~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~  115 (309)
                      .+.||+|+||.||+|.+.+ ++    .+++|.......  ....+.+|++++++++||||+++++++.....++|+||++
T Consensus        12 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~   91 (279)
T cd05057          12 IKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLSSQVQLITQLMP   91 (279)
T ss_pred             cceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCceEEEEecCC
Confidence            3689999999999998643 32    588888754432  2357889999999999999999999888788889999999


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccccc-----
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNY-----  190 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~-----  190 (309)
                      +++|.+++... ...+++..+..++.|++.||+||   |+.+++|+||+|+||+++.++.++|+|||.+......     
T Consensus        92 ~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~L---H~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~  167 (279)
T cd05057          92 LGCLLDYVRNH-KDNIGSQYLLNWCVQIAKGMSYL---EEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYH  167 (279)
T ss_pred             CCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHH---HhCCEEecccCcceEEEcCCCeEEECCCcccccccCccccee
Confidence            99999998753 34589999999999999999999   7789999999999999999999999999998654321     


Q ss_pred             ----CCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHH
Q 021659          191 ----ATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKE  263 (309)
Q Consensus       191 ----~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  263 (309)
                          ..+..|++||...  ..+.++|+||||++++++++ |+.||.+... ............   .   .....    .
T Consensus       168 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-~~~~~~~~~~~~---~---~~~~~----~  236 (279)
T cd05057         168 AEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA-VEIPDLLEKGER---L---PQPPI----C  236 (279)
T ss_pred             cCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH-HHHHHHHhCCCC---C---CCCCC----C
Confidence                1235699999643  34788999999999999998 9999976432 111211111100   0   00111    1


Q ss_pred             HHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          264 LKKLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       264 ~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                      ...+.+++.+||..+|+.||++.++++.|.++..
T Consensus       237 ~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05057         237 TIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR  270 (279)
T ss_pred             CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            2356677779999999999999999999998755

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=1.7e-36  Score=269.24  Aligned_cols=243  Identities=18%  Similarity=0.242  Sum_probs=186.4

Q ss_pred             cccccccCCCceEEEEEEc--------CCcEEEEEEecccc--ccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEE
Q 021659           42 FHRIVYTNSHGAAYKARFQ--------DGEVALVKEIQALN--LEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLL  109 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~--------~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~l  109 (309)
                      +.+.||+|+||.||++...        +...+|+|.+....  .....+..|+++++++ +|+||+++++++.. ...++
T Consensus        22 i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~l  101 (307)
T cd05098          22 LGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV  101 (307)
T ss_pred             EeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence            4478999999999999852        23468999886432  2235688899999999 79999999997765 67789


Q ss_pred             EEeeCCCCCHHHhhcCCC--------------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCc
Q 021659          110 VFDNIENGSLKEHLNDPL--------------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFT  175 (309)
Q Consensus       110 v~e~~~~~sL~~~i~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~  175 (309)
                      ||||+++++|.+++....              ...+++.+++.++.|++.||+||   |+.+++|+||+|+||+++.++.
T Consensus       102 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~l---H~~gi~H~dlkp~Nill~~~~~  178 (307)
T cd05098         102 IVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNV  178 (307)
T ss_pred             EEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHH---HHCCcccccccHHheEEcCCCc
Confidence            999999999999996521              23588899999999999999999   7789999999999999999999


Q ss_pred             eeEecccccccccc---------cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcc
Q 021659          176 AKLSDVGFFNSVRN---------YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSI  243 (309)
Q Consensus       176 ~kl~dfg~~~~~~~---------~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~  243 (309)
                      ++|+|||++.....         ...+..|++||...  ..+.++||||||+++|+|++ |..||.... ..........
T Consensus       179 ~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~-~~~~~~~~~~  257 (307)
T cd05098         179 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP-VEELFKLLKE  257 (307)
T ss_pred             EEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC-HHHHHHHHHc
Confidence            99999999864321         12235799999643  34788999999999999998 888886532 2222221111


Q ss_pred             cccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcc
Q 021659          244 SSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDI  298 (309)
Q Consensus       244 ~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~  298 (309)
                      . ..     ...    .......+.+++.+||..+|++|||+.++++.|+++...
T Consensus       258 ~-~~-----~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~  302 (307)
T cd05098         258 G-HR-----MDK----PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL  302 (307)
T ss_pred             C-CC-----CCC----CCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence            1 00     011    111234566677799999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=7.8e-36  Score=260.72  Aligned_cols=238  Identities=20%  Similarity=0.297  Sum_probs=184.0

Q ss_pred             ccccccCCCceEEEEEEc------CCcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEee
Q 021659           43 HRIVYTNSHGAAYKARFQ------DGEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~------~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      .+.||+|+||.||+|...      .+..|++|.+.....  ....+.+|+.+++.++|+||+++++++.. ...++||||
T Consensus        11 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   90 (277)
T cd05032          11 IRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMEL   90 (277)
T ss_pred             EeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEec
Confidence            368999999999999863      236799999854432  23468899999999999999999997754 678899999


Q ss_pred             CCCCCHHHhhcCCC--------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccc
Q 021659          114 IENGSLKEHLNDPL--------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFN  185 (309)
Q Consensus       114 ~~~~sL~~~i~~~~--------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~  185 (309)
                      +++++|.+++....        ...+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++.+||+|||++.
T Consensus        91 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~di~p~nill~~~~~~kl~dfg~~~  167 (277)
T cd05032          91 MAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYL---AAKKFVHRDLAARNCMVAEDLTVKIGDFGMTR  167 (277)
T ss_pred             CCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHH---HhCCccccccChheEEEcCCCCEEECCcccch
Confidence            99999999986421        23478889999999999999999   78899999999999999999999999999875


Q ss_pred             ccc---------ccCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccC
Q 021659          186 SVR---------NYATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDP  253 (309)
Q Consensus       186 ~~~---------~~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (309)
                      ...         ...++..|.+||..  ...+.++||||||+++|++++ |+.||...... ....... ....     +
T Consensus       168 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-~~~~~~~-~~~~-----~  240 (277)
T cd05032         168 DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE-EVLKFVI-DGGH-----L  240 (277)
T ss_pred             hhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH-HHHHHHh-cCCC-----C
Confidence            432         12345679999964  335788999999999999998 99998754321 1111111 1111     1


Q ss_pred             cCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhh
Q 021659          254 DLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQN  294 (309)
Q Consensus       254 ~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~  294 (309)
                      ..+...    ...+.+++.+||+.+|++|||+.++++.|++
T Consensus       241 ~~~~~~----~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  277 (277)
T cd05032         241 DLPENC----PDKLLELMRMCWQYNPKMRPTFLEIVSSLKD  277 (277)
T ss_pred             CCCCCC----CHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence            111111    3456677779999999999999999999863

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=6.4e-36  Score=263.42  Aligned_cols=250  Identities=19%  Similarity=0.240  Sum_probs=192.7

Q ss_pred             cCHHHHHHhhcccc--cccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccC-CCCCcceEeeeEeC-
Q 021659           30 FSYKDIKMATDGFH--RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRL-HHRHLLALQGFSTG-  104 (309)
Q Consensus        30 ~~~~~i~~~~~~~~--~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-  104 (309)
                      +...++..++++|.  ..||+|+||.||++.. .+++.+|+|.+.........+.+|+.+++++ +|||++++++++.. 
T Consensus        12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~   91 (291)
T cd06639          12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA   91 (291)
T ss_pred             hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence            44455666667776  4899999999999997 4688999999865444456788899999999 79999999997642 


Q ss_pred             -----CeeEEEEeeCCCCCHHHhhcCC--CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCcee
Q 021659          105 -----RKRLLVFDNIENGSLKEHLNDP--LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAK  177 (309)
Q Consensus       105 -----~~~~lv~e~~~~~sL~~~i~~~--~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~k  177 (309)
                           ...++|+||+++++|.+++...  ....+++..+..++.+++.||.+|   |+.+++|+||+|+||+++.++.++
T Consensus        92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~ivH~dlkp~nili~~~~~~k  168 (291)
T cd06639          92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHL---HNNRIIHRDVKGNNILLTTEGGVK  168 (291)
T ss_pred             cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHEEEcCCCCEE
Confidence                 3478999999999999988531  246789999999999999999999   778999999999999999999999


Q ss_pred             Eeccccccccc-------ccCCCCCCCCCCCCCC-------CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcc
Q 021659          178 LSDVGFFNSVR-------NYATMPHSSCPEDCST-------QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSI  243 (309)
Q Consensus       178 l~dfg~~~~~~-------~~~~~~~~~~PE~~~~-------~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~  243 (309)
                      |+|||++....       ...++..|++||....       .+.++|+||||+++++|++|+.||............. .
T Consensus       169 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~-~  247 (291)
T cd06639         169 LVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIP-R  247 (291)
T ss_pred             EeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHh-c
Confidence            99999876432       2345678999996422       3688999999999999999999997654332222111 1


Q ss_pred             cccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          244 SSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       244 ~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                       .....+.++       ......+.+++.+||+.+|+.||++.|+++.
T Consensus       248 -~~~~~~~~~-------~~~~~~l~~li~~~l~~~p~~Rps~~~il~~  287 (291)
T cd06639         248 -NPPPTLLHP-------EKWCRSFNHFISQCLIKDFEARPSVTHLLEH  287 (291)
T ss_pred             -CCCCCCCcc-------cccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence             111111111       1123456777789999999999999999863

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=2.3e-36  Score=266.02  Aligned_cols=249  Identities=19%  Similarity=0.309  Sum_probs=186.4

Q ss_pred             ccccccCCCceEEEEEEc------CCcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEee
Q 021659           43 HRIVYTNSHGAAYKARFQ------DGEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~------~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      .+.||+|+||.||+|...      .+..||+|.+.....  ....+.+|+..++.++||||+++++++.+ ...++||||
T Consensus        11 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   90 (288)
T cd05061          11 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMEL   90 (288)
T ss_pred             eeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEeC
Confidence            468999999999999753      245799998753332  23467889999999999999999997654 677899999


Q ss_pred             CCCCCHHHhhcCCC--------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccc
Q 021659          114 IENGSLKEHLNDPL--------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFN  185 (309)
Q Consensus       114 ~~~~sL~~~i~~~~--------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~  185 (309)
                      +++|+|.+++....        ...++...+..++.+++.||.||   |+++++||||||+||+++.++.++++|||++.
T Consensus        91 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---H~~~i~H~dikp~nili~~~~~~~L~Dfg~~~  167 (288)
T cd05061          91 MAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYL---NAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR  167 (288)
T ss_pred             CCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCCcCCCCChheEEEcCCCcEEECcCCccc
Confidence            99999999996421        23456778899999999999999   78899999999999999999999999999876


Q ss_pred             cccc---------cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccC
Q 021659          186 SVRN---------YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDP  253 (309)
Q Consensus       186 ~~~~---------~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (309)
                      ....         ..++..|++||...  ..+.++|+|||||++++|++ |..||.+... .+...... .....     
T Consensus       168 ~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~-~~~~~~~~-~~~~~-----  240 (288)
T cd05061         168 DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLKFVM-DGGYL-----  240 (288)
T ss_pred             cccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHH-cCCCC-----
Confidence            4321         12345799999753  34788999999999999998 7888865322 11111111 11110     


Q ss_pred             cCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcccccccccccc
Q 021659          254 DLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCYKYSRVSF  308 (309)
Q Consensus       254 ~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~~~~~~~~~  308 (309)
                      .....    ....+.+++.+||+.||++|||+.++++.|++..   .+-++..||
T Consensus       241 ~~~~~----~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~---~~~~~~~~~  288 (288)
T cd05061         241 DQPDN----CPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL---HPSFPEVSF  288 (288)
T ss_pred             CCCCC----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc---CCCCCCCCC
Confidence            01111    1245667777999999999999999999999654   334444444

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=1.4e-35  Score=257.13  Aligned_cols=238  Identities=18%  Similarity=0.248  Sum_probs=180.0

Q ss_pred             cccccCCCceEEEEEEc----CCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEe--CCeeEEEEeeCC
Q 021659           44 RIVYTNSHGAAYKARFQ----DGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFST--GRKRLLVFDNIE  115 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~----~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~--~~~~~lv~e~~~  115 (309)
                      +.||+|+||.||+|...    ++..+|+|.+....  ...+.+.+|+.+++.++||||+++++++.  +...++++||+.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            36899999999999853    23578999874322  23457889999999999999999999764  345789999999


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------  188 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------  188 (309)
                      +++|.+++... ...+++..+..++.++++||.||   |+.+++|+||+|+||+++.++.+||+|||++....       
T Consensus        81 ~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~  156 (262)
T cd05058          81 HGDLRNFIRSE-THNPTVKDLIGFGLQVAKGMEYL---ASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSV  156 (262)
T ss_pred             CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHH---HhCCccccccCcceEEEcCCCcEEECCccccccccCCcceee
Confidence            99999998753 24467788899999999999999   78899999999999999999999999999986432       


Q ss_pred             ----ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhC-CCCCCCCccHHHHHHHhcccccccccccCcCCCCCCH
Q 021659          189 ----NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTG-QSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDS  261 (309)
Q Consensus       189 ----~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  261 (309)
                          ...++..|++||...  ..+.++||||||+++++|++| .+||.... .......... +.     .+......  
T Consensus       157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~-~~~~~~~~~~-~~-----~~~~~~~~--  227 (262)
T cd05058         157 HNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD-SFDITVYLLQ-GR-----RLLQPEYC--  227 (262)
T ss_pred             cccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHHhc-CC-----CCCCCCcC--
Confidence                112345799999643  347789999999999999995 55565432 2222221111 10     01111111  


Q ss_pred             HHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhh
Q 021659          262 KELKKLLAVARLCIKTKDKPTISIPQISRYLQNEV  296 (309)
Q Consensus       262 ~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~  296 (309)
                        ...+.+++.+||..+|++||++.+++..|++..
T Consensus       228 --~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~  260 (262)
T cd05058         228 --PDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF  260 (262)
T ss_pred             --CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence              235667777999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=7.5e-36  Score=263.62  Aligned_cols=242  Identities=16%  Similarity=0.235  Sum_probs=180.4

Q ss_pred             ccccccCCCceEEEEEEcC---------------CcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeC-
Q 021659           43 HRIVYTNSHGAAYKARFQD---------------GEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTG-  104 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~---------------~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-  104 (309)
                      .+.||+|+||.||++....               ...||+|.+....  ...+.+.+|++++++++|+|++++++++.. 
T Consensus        10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~   89 (295)
T cd05097          10 KEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSD   89 (295)
T ss_pred             hhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEcCC
Confidence            3689999999999987532               2358999885432  224568999999999999999999997754 


Q ss_pred             CeeEEEEeeCCCCCHHHhhcCCC----------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCC
Q 021659          105 RKRLLVFDNIENGSLKEHLNDPL----------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENF  174 (309)
Q Consensus       105 ~~~~lv~e~~~~~sL~~~i~~~~----------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~  174 (309)
                      ...++||||+++++|.+++....          ...+++..++.++.+++.||.||   |+.+++|+||+|+||+++.++
T Consensus        90 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~l---H~~~i~H~dlkp~Nill~~~~  166 (295)
T cd05097          90 DPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYL---ASLNFVHRDLATRNCLVGNHY  166 (295)
T ss_pred             CccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHH---HhcCeeccccChhhEEEcCCC
Confidence            67889999999999999885421          12478889999999999999999   788999999999999999999


Q ss_pred             ceeEecccccccccc---------cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh--CCCCCCCCccH--HHHHH
Q 021659          175 TAKLSDVGFFNSVRN---------YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT--GQSPEEGDVDL--IQWIQ  239 (309)
Q Consensus       175 ~~kl~dfg~~~~~~~---------~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t--g~~p~~~~~~~--~~~~~  239 (309)
                      .+||+|||++.....         ..++..|.+||...  ..+.++|+||||+++++|++  +..||......  .....
T Consensus       167 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~  246 (295)
T cd05097         167 TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTG  246 (295)
T ss_pred             cEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHH
Confidence            999999999864321         12345799999643  34789999999999999988  66777643221  11111


Q ss_pred             HhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHh
Q 021659          240 ESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQ  293 (309)
Q Consensus       240 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~  293 (309)
                      ............  ..    .......+.+++.+||..||++|||+.+|++.|+
T Consensus       247 ~~~~~~~~~~~~--~~----~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         247 EFFRNQGRQIYL--SQ----TPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             HhhhhccccccC--CC----CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence            111100000000  00    0011246777777999999999999999999987

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=9.8e-36  Score=270.14  Aligned_cols=240  Identities=18%  Similarity=0.229  Sum_probs=179.4

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc---ccHHHHHHHHHHHccCCCCCcceEeeeEeC-------CeeEEEEe
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN---LEKDAFYREIQLLGRLHHRHLLALQGFSTG-------RKRLLVFD  112 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~---~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-------~~~~lv~e  112 (309)
                      +.||+|+||.||++.. .++..||+|.+....   .....+.+|+.+++.++||||+++++++..       ...|+|||
T Consensus        27 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e  106 (359)
T cd07876          27 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVME  106 (359)
T ss_pred             EEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEEe
Confidence            6899999999999996 458899999985332   234567899999999999999999997642       24689999


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc----
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----  188 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----  188 (309)
                      |+++ +|.+.+.    ..+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....    
T Consensus       107 ~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~~L~~L---H~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~  178 (359)
T cd07876         107 LMDA-NLCQVIH----MELDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFM  178 (359)
T ss_pred             CCCc-CHHHHHh----ccCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEECCCCCEEEecCCCccccccCcc
Confidence            9976 6766664    3478889999999999999999   78899999999999999999999999999986432    


Q ss_pred             --ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccc------------ccccc-
Q 021659          189 --NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSS------------IHRMI-  251 (309)
Q Consensus       189 --~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~------------~~~~~-  251 (309)
                        ...++..|+|||...+  .+.++||||||+++|+|++|+.||.+......+.......+.            ..... 
T Consensus       179 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (359)
T cd07876         179 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVE  258 (359)
T ss_pred             CCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHh
Confidence              2356788999997543  478899999999999999999999865443322111100000            00000 


Q ss_pred             -cCcCCC----------------CCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          252 -DPDLGG----------------SYDSKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       252 -~~~l~~----------------~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                       .+....                .........+.+++.+||..||++|||+.|+++.
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  315 (359)
T cd07876         259 NRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH  315 (359)
T ss_pred             hCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence             000000                0000112456677779999999999999999964

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=4.3e-36  Score=263.08  Aligned_cols=232  Identities=18%  Similarity=0.206  Sum_probs=178.7

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCC
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGS  118 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~s  118 (309)
                      .+.||+|++|.||+|.. .++..||+|.+....  ...+.+.+|++++++++||||+++++++. +...++|+||+++++
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   85 (279)
T cd06619           6 QEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGS   85 (279)
T ss_pred             eeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCC
Confidence            36799999999999986 567899999885432  22356889999999999999999999665 467789999999999


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-----ccCCC
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-----NYATM  193 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-----~~~~~  193 (309)
                      |..+      ..+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++.++|+|||++....     ...++
T Consensus        86 l~~~------~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~  156 (279)
T cd06619          86 LDVY------RKIPEHVLGRIAVAVVKGLTYL---WSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGT  156 (279)
T ss_pred             hHHh------hcCCHHHHHHHHHHHHHHHHHH---HHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCCC
Confidence            9754      3467888999999999999999   78899999999999999999999999999986432     23567


Q ss_pred             CCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHH-----HHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          194 PHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQ-----WIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       194 ~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                      ..|++||....  .+.++|+||||+++|+|++|+.||........     .........     ..+.+.....   ...
T Consensus       157 ~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~---~~~  228 (279)
T cd06619         157 NAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDE-----DPPVLPVGQF---SEK  228 (279)
T ss_pred             hhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhcc-----CCCCCCCCcC---CHH
Confidence            89999997543  47889999999999999999999864221100     000000000     0111111111   234


Q ss_pred             HHHHHHHccCCCCCCCCChHHHHHH
Q 021659          267 LLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      +.+++.+||+.+|+.||++.|+++.
T Consensus       229 ~~~li~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         229 FVHFITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             HHHHHHHHhhCChhhCCCHHHHhcC
Confidence            5667779999999999999999854

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.4e-36  Score=260.44  Aligned_cols=235  Identities=19%  Similarity=0.260  Sum_probs=184.9

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccccHHHHHHHHHHHccC-CCCCcceEeeeEeC-------CeeEEEEeeC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLEKDAFYREIQLLGRL-HHRHLLALQGFSTG-------RKRLLVFDNI  114 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-------~~~~lv~e~~  114 (309)
                      +.||+|++|.||+|... +++.+++|.+.......+.+.+|+++++++ .|+||+++++++..       ...++||||+
T Consensus        12 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~   91 (275)
T cd06608          12 EVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELC   91 (275)
T ss_pred             eeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcC
Confidence            68999999999999974 578899999876665667899999999999 69999999997743       2368999999


Q ss_pred             CCCCHHHhhcCCC--CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc----
Q 021659          115 ENGSLKEHLNDPL--KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----  188 (309)
Q Consensus       115 ~~~sL~~~i~~~~--~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----  188 (309)
                      ++++|.+++....  +..+++..+..++.|++.||.||   |+.+++|+||+|+||+++.++.++++|||++....    
T Consensus        92 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~l---H~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~  168 (275)
T cd06608          92 GGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYL---HENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLG  168 (275)
T ss_pred             CCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH---hcCCcccCCCCHHHEEEccCCeEEECCCccceecccchh
Confidence            9999999886532  46789999999999999999999   88899999999999999999999999999875432    


Q ss_pred             ---ccCCCCCCCCCCCCC-------CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCC
Q 021659          189 ---NYATMPHSSCPEDCS-------TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGS  258 (309)
Q Consensus       189 ---~~~~~~~~~~PE~~~-------~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  258 (309)
                         ...++..|+|||...       ..++++||||||+++++|++|+.||........... ....      ..+.+.. 
T Consensus       169 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~------~~~~~~~-  240 (275)
T cd06608         169 RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFK-IPRN------PPPTLKS-  240 (275)
T ss_pred             hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHH-hhcc------CCCCCCc-
Confidence               234677899999642       235789999999999999999999975432222111 1111      0111111 


Q ss_pred             CCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          259 YDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       259 ~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                       .......+.+++.+||..||+.|||+.+++.
T Consensus       241 -~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         241 -PENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             -hhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence             1112345667777999999999999999975

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=6.8e-36  Score=262.66  Aligned_cols=244  Identities=17%  Similarity=0.152  Sum_probs=179.6

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEeccccc---cHHHHHHHHHHHccC---CCCCcceEeeeEeC------CeeEE
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL---EKDAFYREIQLLGRL---HHRHLLALQGFSTG------RKRLL  109 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l---~h~niv~~~~~~~~------~~~~l  109 (309)
                      .+.||+|+||.||++... +++.||+|.+.....   ....+.+|+++++.+   +||||+++++++..      ...++
T Consensus         5 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~l   84 (288)
T cd07863           5 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTL   84 (288)
T ss_pred             eeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEE
Confidence            367999999999999974 588999998854221   223566777777665   69999999997642      34679


Q ss_pred             EEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc
Q 021659          110 VFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN  189 (309)
Q Consensus       110 v~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~  189 (309)
                      ++||+.+ +|.+++.......+++..+..++.|++.||.||   |+.+++|+||||+||+++.++.+||+|||++.....
T Consensus        85 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~  160 (288)
T cd07863          85 VFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFL---HANCIVHRDLKPENILVTSGGQVKLADFGLARIYSC  160 (288)
T ss_pred             EEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEECCCCCEEECccCccccccC
Confidence            9999985 898888764455689999999999999999999   788999999999999999999999999999865432


Q ss_pred             ------cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhc-----ccccccc-------
Q 021659          190 ------YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESS-----ISSSIHR-------  249 (309)
Q Consensus       190 ------~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~-----~~~~~~~-------  249 (309)
                            ..++..|+|||...  ..+.++|||||||++|+|++|++||.+............     .....+.       
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (288)
T cd07863         161 QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRG  240 (288)
T ss_pred             cccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccccccccc
Confidence                  24577899999653  347899999999999999999999976543322111100     0000000       


Q ss_pred             cccCcCC---CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          250 MIDPDLG---GSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       250 ~~~~~l~---~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ...+...   ..........+.+++.+||++||++|||+.|++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         241 AFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             ccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            0000000   0001112345667777999999999999999885

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=2.3e-36  Score=264.45  Aligned_cols=236  Identities=18%  Similarity=0.251  Sum_probs=181.0

Q ss_pred             cccccCCCceEEEEEEcC------CcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeC
Q 021659           44 RIVYTNSHGAAYKARFQD------GEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNI  114 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~------~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~  114 (309)
                      +.||+|++|.||+|.+.+      +..|++|.+.....  ....+..|+.++++++|+||+++++++.+ ...++||||+
T Consensus        12 ~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   91 (277)
T cd05036          12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELM   91 (277)
T ss_pred             eECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEEecC
Confidence            689999999999999743      56789998753322  23468899999999999999999997654 6678999999


Q ss_pred             CCCCHHHhhcCCC-----CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCC---ceeEeccccccc
Q 021659          115 ENGSLKEHLNDPL-----KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENF---TAKLSDVGFFNS  186 (309)
Q Consensus       115 ~~~sL~~~i~~~~-----~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~---~~kl~dfg~~~~  186 (309)
                      ++++|.+++....     ...+++..+..++.+++.||.||   |+++++|+||+|+||+++.++   .+|++|||++..
T Consensus        92 ~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~  168 (277)
T cd05036          92 AGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYL---EENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARD  168 (277)
T ss_pred             CCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHH---HHCCEeecccchheEEEeccCCCcceEeccCccccc
Confidence            9999999986421     23589999999999999999999   778999999999999998654   589999999865


Q ss_pred             ccc---------cCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCc
Q 021659          187 VRN---------YATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPD  254 (309)
Q Consensus       187 ~~~---------~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (309)
                      ...         ...+..|++||..  ...+.++|||||||++++|++ |..||....... ..........      ..
T Consensus       169 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~-~~~~~~~~~~------~~  241 (277)
T cd05036         169 IYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE-VMEFVTGGGR------LD  241 (277)
T ss_pred             cCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-HHHHHHcCCc------CC
Confidence            421         1123469999975  335789999999999999997 999997643221 1111111110      11


Q ss_pred             CCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHh
Q 021659          255 LGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQ  293 (309)
Q Consensus       255 l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~  293 (309)
                      .+...    ...+.+++.+||+.+|++|||+.+|++.|+
T Consensus       242 ~~~~~----~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         242 PPKGC----PGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             CCCCC----CHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            11111    245667777999999999999999999886

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.2e-36  Score=272.56  Aligned_cols=229  Identities=19%  Similarity=0.311  Sum_probs=181.6

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccc---cHHHHHHHHHHHccCC-CCCcceEeeeE-eCCeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNL---EKDAFYREIQLLGRLH-HRHLLALQGFS-TGRKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~-h~niv~~~~~~-~~~~~~lv~e~~~~~s  118 (309)
                      ++||.|+.+.||++...+.+.||+|++.....   ....|.+|+++|.+|+ |.+||++++|- .++..|+|||+=+. +
T Consensus       367 k~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~Gd~-D  445 (677)
T KOG0596|consen  367 KQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECGDI-D  445 (677)
T ss_pred             HhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeecccc-c
Confidence            47999999999999988888898888844333   3457899999999995 89999999986 46889999998655 9


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc---------cc
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV---------RN  189 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~---------~~  189 (309)
                      |.+.++........| .+..+..|++.|+.+.   |..||||.||||+|+++ ..|.+||+|||+|.-.         ..
T Consensus       446 L~kiL~k~~~~~~~~-~lk~ywkqML~aV~~I---H~~gIVHSDLKPANFLl-VkG~LKLIDFGIA~aI~~DTTsI~kds  520 (677)
T KOG0596|consen  446 LNKILKKKKSIDPDW-FLKFYWKQMLLAVKTI---HQHGIVHSDLKPANFLL-VKGRLKLIDFGIANAIQPDTTSIVKDS  520 (677)
T ss_pred             HHHHHHhccCCCchH-HHHHHHHHHHHHHHHH---HHhceeecCCCcccEEE-EeeeEEeeeechhcccCccccceeecc
Confidence            999998754343434 7888999999999999   88999999999999998 5679999999998644         34


Q ss_pred             cCCCCCCCCCCCCCC-------------CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCC
Q 021659          190 YATMPHSSCPEDCST-------------QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLG  256 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~-------------~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  256 (309)
                      +.||..|++||....             .++++|||||||+||+|+.|+.||..-......         +..+.+|...
T Consensus       521 QvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aK---------l~aI~~P~~~  591 (677)
T KOG0596|consen  521 QVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAK---------LHAITDPNHE  591 (677)
T ss_pred             ccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHH---------HHhhcCCCcc
Confidence            689999999994211             157899999999999999999999865433332         2344445332


Q ss_pred             ----CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          257 ----GSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       257 ----~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                          ...+..+   ++.++..||+.||+.||++.++|+
T Consensus       592 Iefp~~~~~~~---li~~mK~CL~rdPkkR~si~eLLq  626 (677)
T KOG0596|consen  592 IEFPDIPENDE---LIDVMKCCLARDPKKRWSIPELLQ  626 (677)
T ss_pred             ccccCCCCchH---HHHHHHHHHhcCcccCCCcHHHhc
Confidence                1222333   555666999999999999999985

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=4e-36  Score=268.90  Aligned_cols=228  Identities=17%  Similarity=0.217  Sum_probs=177.2

Q ss_pred             ccccccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccCC-CCCcceEeeeEeC-CeeEEEEee
Q 021659           41 GFHRIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRLH-HRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        41 ~~~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~-h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      ++.+.||+|+||.||++... +++.||+|.+....    ...+.+..|..++..+. |++|+++.+++.. ...|+||||
T Consensus         3 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey   82 (323)
T cd05615           3 NFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEY   82 (323)
T ss_pred             eEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcC
Confidence            34578999999999999964 58899999985432    22345778888988886 5777788886654 678899999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-----
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-----  188 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-----  188 (309)
                      +++|+|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....     
T Consensus        83 ~~~g~L~~~i~~--~~~l~~~~~~~i~~qi~~al~~l---H~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~  157 (323)
T cd05615          83 VNGGDLMYHIQQ--VGKFKEPQAVFYAAEISVGLFFL---HRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVT  157 (323)
T ss_pred             CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCcc
Confidence            999999999876  56799999999999999999999   77899999999999999999999999999876421     


Q ss_pred             --ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHH
Q 021659          189 --NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKEL  264 (309)
Q Consensus       189 --~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  264 (309)
                        ...+++.|+|||....  .+.++|+||||+++++|++|+.||.+..... ........ .      ...+...    .
T Consensus       158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~-~~~~i~~~-~------~~~p~~~----~  225 (323)
T cd05615         158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE-LFQSIMEH-N------VSYPKSL----S  225 (323)
T ss_pred             ccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHH-HHHHHHhC-C------CCCCccC----C
Confidence              2347889999996533  4788999999999999999999997654321 11111110 0      1111111    2


Q ss_pred             HHHHHHHHHccCCCCCCCCCh
Q 021659          265 KKLLAVARLCIKTKDKPTISI  285 (309)
Q Consensus       265 ~~l~~l~~~cl~~dp~~Rps~  285 (309)
                      ..+.+++.+||+.+|.+|++.
T Consensus       226 ~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         226 KEAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             HHHHHHHHHHcccCHhhCCCC
Confidence            345567779999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=1.7e-35  Score=261.45  Aligned_cols=244  Identities=18%  Similarity=0.261  Sum_probs=181.2

Q ss_pred             cccccccCCCceEEEEEEc-----------------CCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeE
Q 021659           42 FHRIVYTNSHGAAYKARFQ-----------------DGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFS  102 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~-----------------~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~  102 (309)
                      +.+.||+|+||.||++...                 ++..+|+|.+....  ...+.+.+|+++++.++|+||+++++++
T Consensus         9 ~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~   88 (296)
T cd05095           9 FKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVC   88 (296)
T ss_pred             eeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence            3468999999999998632                 23468999885432  2345789999999999999999999977


Q ss_pred             eC-CeeEEEEeeCCCCCHHHhhcCCC---------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC
Q 021659          103 TG-RKRLLVFDNIENGSLKEHLNDPL---------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE  172 (309)
Q Consensus       103 ~~-~~~~lv~e~~~~~sL~~~i~~~~---------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~  172 (309)
                      .. ...+++|||+++++|.+++....         ...+++.++..++.+++.||+||   |+.+++|+||||+||+++.
T Consensus        89 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~l---H~~~i~H~dlkp~Nili~~  165 (296)
T cd05095          89 ITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYL---SSLNFVHRDLATRNCLVGK  165 (296)
T ss_pred             ecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHH---HHCCeecccCChheEEEcC
Confidence            54 67789999999999999986521         13477889999999999999999   7889999999999999999


Q ss_pred             CCceeEecccccccccc---------cCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh--CCCCCCCCccHHHHHH
Q 021659          173 NFTAKLSDVGFFNSVRN---------YATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT--GQSPEEGDVDLIQWIQ  239 (309)
Q Consensus       173 ~~~~kl~dfg~~~~~~~---------~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t--g~~p~~~~~~~~~~~~  239 (309)
                      ++.++++|||++.....         ...+..|++||..  ...+.++|+||||+++|||++  |..||...... +...
T Consensus       166 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~-~~~~  244 (296)
T cd05095         166 NYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE-QVIE  244 (296)
T ss_pred             CCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChH-HHHH
Confidence            99999999999864321         1224578899843  335789999999999999998  77888643221 1111


Q ss_pred             Hhcc--cccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhh
Q 021659          240 ESSI--SSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQN  294 (309)
Q Consensus       240 ~~~~--~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~  294 (309)
                      ....  .........+. ..    .....+.+++.+||+.||++||++.+|++.|++
T Consensus       245 ~~~~~~~~~~~~~~~~~-~~----~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  296 (296)
T cd05095         245 NTGEFFRDQGRQVYLPK-PA----LCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE  296 (296)
T ss_pred             HHHHHHhhccccccCCC-CC----CCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence            0000  00000000011 01    112456677779999999999999999999873

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=1.1e-35  Score=258.83  Aligned_cols=239  Identities=17%  Similarity=0.289  Sum_probs=184.7

Q ss_pred             cccccccCCCceEEEEEEc----CCcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeC
Q 021659           42 FHRIVYTNSHGAAYKARFQ----DGEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNI  114 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~----~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~  114 (309)
                      +.+.||+|+||.||+|...    .+..+|+|.+.....  ..+.+.+|+.++++++||||+++++++.. ...++||||+
T Consensus         8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   87 (267)
T cd05066           8 IEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYM   87 (267)
T ss_pred             eeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcC
Confidence            3468999999999999863    234789998854332  23578999999999999999999997754 6778999999


Q ss_pred             CCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccccc----
Q 021659          115 ENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNY----  190 (309)
Q Consensus       115 ~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~----  190 (309)
                      ++++|.+++... ...+++.++..++.+++.||.+|   |+.+++|+||+|+||+++.++.++++|||++......    
T Consensus        88 ~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~l---H~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~  163 (267)
T cd05066          88 ENGSLDAFLRKH-DGQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAA  163 (267)
T ss_pred             CCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHH---HHCCEeehhhchhcEEECCCCeEEeCCCCccccccccccee
Confidence            999999998753 35689999999999999999999   7889999999999999999999999999988654321    


Q ss_pred             ------CCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCH
Q 021659          191 ------ATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDS  261 (309)
Q Consensus       191 ------~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  261 (309)
                            ..+..|.+||...  ..+.++|+||||++++++++ |..||...... ...........      .....    
T Consensus       164 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~-~~~~~~~~~~~------~~~~~----  232 (267)
T cd05066         164 YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ-DVIKAIEEGYR------LPAPM----  232 (267)
T ss_pred             eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH-HHHHHHhCCCc------CCCCC----
Confidence                  1234689999754  35789999999999999886 99998754321 11111111100      01111    


Q ss_pred             HHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhh
Q 021659          262 KELKKLLAVARLCIKTKDKPTISIPQISRYLQNE  295 (309)
Q Consensus       262 ~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~  295 (309)
                      .....+.+++.+|++.+|+.||++.++++.|+++
T Consensus       233 ~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         233 DCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             CCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence            1134556777799999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=8.3e-36  Score=261.62  Aligned_cols=243  Identities=17%  Similarity=0.188  Sum_probs=182.5

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEecccc---ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALN---LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~---~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      .+.||+|++|.||+|... ++..||+|.+....   ...+.+.+|+.++++++||||+++++++.+ ...++||||++ +
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~   83 (285)
T cd07861           5 IEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-M   83 (285)
T ss_pred             eeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-C
Confidence            367999999999999974 58899999885332   223568899999999999999999997754 67889999997 5


Q ss_pred             CHHHhhcCCC-CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------c
Q 021659          118 SLKEHLNDPL-KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------N  189 (309)
Q Consensus       118 sL~~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~  189 (309)
                      +|.+++.... ...+++..+..++.|++.||.||   |+.+++|+||+|+||+++.++.++|+|||++....       .
T Consensus        84 ~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~l---H~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  160 (285)
T cd07861          84 DLKKYLDSLPKGQYMDAELVKSYLYQILQGILFC---HSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTH  160 (285)
T ss_pred             CHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHH---HhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcccccC
Confidence            8888876532 36789999999999999999999   78899999999999999999999999999876432       2


Q ss_pred             cCCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccc------------------cc
Q 021659          190 YATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSS------------------IH  248 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~------------------~~  248 (309)
                      ..+++.|+|||...+   .+.++||||||+++++|+||+.||.+.............-+.                  ..
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (285)
T cd07861         161 EVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFP  240 (285)
T ss_pred             CcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhcc
Confidence            245678999996432   367899999999999999999999865443322211100000                  00


Q ss_pred             ccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          249 RMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       249 ~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .+...... ........++.+++.+||+.||++|||+.+++.
T Consensus       241 ~~~~~~~~-~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         241 KWKKGSLR-SAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             ccCcchhH-HhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence            00000000 000011345557777999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=1.8e-36  Score=262.43  Aligned_cols=233  Identities=18%  Similarity=0.210  Sum_probs=177.5

Q ss_pred             cccccCCCceEEEEEEcC--------CcEEEEEEecccc-ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEee
Q 021659           44 RIVYTNSHGAAYKARFQD--------GEVALVKEIQALN-LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~--------~~~va~K~~~~~~-~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      +.||+|+||.||+|....        ...+++|.+.... ...+.+..|+.+++.++|||++++++++.. ...++||||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            368999999999998632        2247777764332 224578899999999999999999997654 678899999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCc--------eeEecccccc
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFT--------AKLSDVGFFN  185 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~--------~kl~dfg~~~  185 (309)
                      +++|+|.+++... ...+++..+..++.|++.||.||   |+++++|+||||+||+++.++.        ++++|||++.
T Consensus        81 ~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~l---H~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~  156 (258)
T cd05078          81 VKFGSLDTYLKKN-KNLINISWKLEVAKQLAWALHFL---EDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI  156 (258)
T ss_pred             CCCCcHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence            9999999999753 24688999999999999999999   7889999999999999987654        6999999876


Q ss_pred             cccc---cCCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCC-CCCCCCccHHHHHHHhcccccccccccCcCCCC
Q 021659          186 SVRN---YATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQ-SPEEGDVDLIQWIQESSISSSIHRMIDPDLGGS  258 (309)
Q Consensus       186 ~~~~---~~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  258 (309)
                      ....   ..++..|++||....   .+.++||||||+++|+|++|. .|+....... ........        ..++..
T Consensus       157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~--------~~~~~~  227 (258)
T cd05078         157 TVLPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK-KLQFYEDR--------HQLPAP  227 (258)
T ss_pred             ccCCchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH-HHHHHHcc--------ccCCCC
Confidence            4432   356778999997643   477899999999999999985 5554432221 11111110        111111


Q ss_pred             CCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHh
Q 021659          259 YDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQ  293 (309)
Q Consensus       259 ~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~  293 (309)
                      .    ...+.+++.+||+.||+.|||+.++++.|.
T Consensus       228 ~----~~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         228 K----WTELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             C----cHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            1    245667777999999999999999998863

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=9.8e-36  Score=259.08  Aligned_cols=240  Identities=18%  Similarity=0.223  Sum_probs=182.8

Q ss_pred             hhcccc--cccccCCCceEEEEEEc-CCcEEEEEEecccc-ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEe
Q 021659           38 ATDGFH--RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN-LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFD  112 (309)
Q Consensus        38 ~~~~~~--~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~-~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e  112 (309)
                      +++++.  ..||+|+||.||+|... ++..|++|.+.... ...+.+.+|++++++++|+||+++++++.. ...++++|
T Consensus         6 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   85 (268)
T cd06624           6 EYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFME   85 (268)
T ss_pred             ccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEe
Confidence            344443  48999999999999964 57889999885433 234578999999999999999999997765 67789999


Q ss_pred             eCCCCCHHHhhcCCCCCCC--CHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC-CCceeEeccccccccc-
Q 021659          113 NIENGSLKEHLNDPLKTPL--DWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE-NFTAKLSDVGFFNSVR-  188 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l--~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~-~~~~kl~dfg~~~~~~-  188 (309)
                      |+++++|.+.+... ...+  ++..+..++.|++.||.||   |+.+++|+||+|+||+++. ++.++|+|||++.... 
T Consensus        86 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~al~~l---H~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~  161 (268)
T cd06624          86 QVPGGSLSALLRSK-WGPLKDNEQTIIFYTKQILEGLKYL---HDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAG  161 (268)
T ss_pred             cCCCCCHHHHHHHh-cccCCCcHHHHHHHHHHHHHHHHHH---HHCCEeecCCCHHHEEEcCCCCeEEEecchhheeccc
Confidence            99999999998752 1334  7888999999999999999   7889999999999999976 6789999999875432 


Q ss_pred             ------ccCCCCCCCCCCCCCC----CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCC
Q 021659          189 ------NYATMPHSSCPEDCST----QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGS  258 (309)
Q Consensus       189 ------~~~~~~~~~~PE~~~~----~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  258 (309)
                            ...++..|.+||....    .+.++|+||||+++++|++|+.||.................     ..+.++  
T Consensus       162 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~--  234 (268)
T cd06624         162 INPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFK-----IHPEIP--  234 (268)
T ss_pred             CCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhc-----cCCCCC--
Confidence                  2346788999996432    46789999999999999999999865432211111100000     011111  


Q ss_pred             CCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          259 YDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       259 ~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                        ......+.+++.+||..+|++|||+.+++.
T Consensus       235 --~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         235 --ESLSAEAKNFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             --cccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence              112345666777999999999999999875

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=4.7e-36  Score=272.33  Aligned_cols=185  Identities=16%  Similarity=0.222  Sum_probs=159.0

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||++... +++.||+|++....    ...+.+..|+.++.+++|+||+++++.+.+ ...++||||+++|
T Consensus         7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~gg   86 (360)
T cd05627           7 KVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGG   86 (360)
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCc
Confidence            68999999999999974 58899999985322    223567889999999999999999996654 6788999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---------
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---------  188 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---------  188 (309)
                      +|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.++|+|||++....         
T Consensus        87 ~L~~~l~~--~~~l~~~~~~~~~~qi~~~L~~l---H~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~  161 (360)
T cd05627          87 DMMTLLMK--KDTLSEEATQFYIAETVLAIDAI---HQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYR  161 (360)
T ss_pred             cHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEccCCCHHHEEECCCCCEEEeeccCCccccccccccccc
Confidence            99999976  56789999999999999999999   78899999999999999999999999999875321         


Q ss_pred             ---------------------------------ccCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHhCCCCCCCCcc
Q 021659          189 ---------------------------------NYATMPHSSCPEDC--STQDCSNIIFQLGVLILELVTGQSPEEGDVD  233 (309)
Q Consensus       189 ---------------------------------~~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~  233 (309)
                                                       ...+|+.|+|||..  ...+.++|+|||||++|+|++|+.||.....
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~  241 (360)
T cd05627         162 NLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETP  241 (360)
T ss_pred             ccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCH
Confidence                                             12578899999964  3357899999999999999999999976543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=2e-35  Score=259.11  Aligned_cols=236  Identities=16%  Similarity=0.221  Sum_probs=182.3

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc-ccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN-LEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~-~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL~  120 (309)
                      +.||+|+||.||++... .+..+++|.+.... ...+.+.+|+++++.++|||++++++++. ....++|+||+++++|.
T Consensus        11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~   90 (282)
T cd06643          11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVD   90 (282)
T ss_pred             hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCcHH
Confidence            56999999999999975 47788899885433 23456889999999999999999999665 46788999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccCCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYATM  193 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~~~  193 (309)
                      .++... ...+++..+..++.+++.||.||   |+.+++||||+|+||+++.++.++++|||++....       ...++
T Consensus        91 ~~~~~~-~~~l~~~~~~~~~~qi~~~L~~L---H~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  166 (282)
T cd06643          91 AVMLEL-ERPLTEPQIRVVCKQTLEALNYL---HENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGT  166 (282)
T ss_pred             HHHHhc-CCCCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCcccEEEccCCCEEEcccccccccccccccccccccc
Confidence            887542 35789999999999999999999   77899999999999999999999999999885432       23567


Q ss_pred             CCCCCCCCCC-------CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          194 PHSSCPEDCS-------TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       194 ~~~~~PE~~~-------~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                      ..|++||...       ..+.++|+||||+++++|++|+.||............. .. .......+   .. .   ...
T Consensus       167 ~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~-~~-~~~~~~~~---~~-~---~~~  237 (282)
T cd06643         167 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIA-KS-EPPTLAQP---SR-W---SSE  237 (282)
T ss_pred             ccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHh-hc-CCCCCCCc---cc-c---CHH
Confidence            8899999642       23568999999999999999999997644322211111 11 00111111   11 1   234


Q ss_pred             HHHHHHHccCCCCCCCCChHHHHHHH
Q 021659          267 LLAVARLCIKTKDKPTISIPQISRYL  292 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rps~~evl~~L  292 (309)
                      +.+++.+||+.||..||++.++++.-
T Consensus       238 ~~~li~~~l~~~p~~Rp~~~~il~~~  263 (282)
T cd06643         238 FKDFLKKCLEKNVDARWTTTQLLQHP  263 (282)
T ss_pred             HHHHHHHHccCChhhCcCHHHHhcCC
Confidence            55666699999999999999988543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=1.1e-35  Score=265.08  Aligned_cols=182  Identities=22%  Similarity=0.228  Sum_probs=150.0

Q ss_pred             cccccCCCceEEEEEEc---CCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC---CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ---DGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG---RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~---~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~---~~~~lv~e~~~~~  117 (309)
                      ++||+|+||.||+|...   +++.+|+|.+.... ....+.+|++++++++||||+++++++..   ...++++||+.+ 
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-   84 (317)
T cd07868           7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-   84 (317)
T ss_pred             cccccCCCeEEEEEEEccCCCCceEEEEEECCCC-CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC-
Confidence            57999999999999864   46789999886443 23457889999999999999999996642   456799999865 


Q ss_pred             CHHHhhcCC-------CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceee----CCCCceeEeccccccc
Q 021659          118 SLKEHLNDP-------LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIML----DENFTAKLSDVGFFNS  186 (309)
Q Consensus       118 sL~~~i~~~-------~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill----~~~~~~kl~dfg~~~~  186 (309)
                      +|.+++...       ....+++..+..++.|++.||.||   |+.+++||||||+||++    +.++.+||+|||++..
T Consensus        85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~L---H~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~  161 (317)
T cd07868          85 DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYL---HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL  161 (317)
T ss_pred             CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHH---HhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceec
Confidence            888876421       124688999999999999999999   78899999999999999    4557899999999864


Q ss_pred             cc----------ccCCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCC
Q 021659          187 VR----------NYATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEG  230 (309)
Q Consensus       187 ~~----------~~~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~  230 (309)
                      ..          ...+|+.|+|||...+   .+.++||||+||++++|++|+.||..
T Consensus       162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~  218 (317)
T cd07868         162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC  218 (317)
T ss_pred             cCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence            42          2356788999996532   47889999999999999999999964

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=4.8e-36  Score=273.42  Aligned_cols=243  Identities=14%  Similarity=0.186  Sum_probs=182.6

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEecccc---ccHHHHHHHHHHHccCCCCCcceEeeeEeC-C-----eeEEEEe
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQALN---LEKDAFYREIQLLGRLHHRHLLALQGFSTG-R-----KRLLVFD  112 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~---~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~-----~~~lv~e  112 (309)
                      .+.||+|+||.||++.. .+++.||+|.+....   ...+.+.+|+++++.++|+||+++++++.. .     ..|+|+|
T Consensus         5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e   84 (372)
T cd07853           5 DRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTE   84 (372)
T ss_pred             cceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEee
Confidence            36899999999999996 468999999885422   233568899999999999999999997754 2     5789999


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc----
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----  188 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----  188 (309)
                      |+.+ +|.+.+..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....    
T Consensus        85 ~~~~-~l~~~~~~--~~~l~~~~~~~~~~qi~~aL~~L---H~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~  158 (372)
T cd07853          85 LMQS-DLHKIIVS--PQPLSSDHVKVFLYQILRGLKYL---HSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDES  158 (372)
T ss_pred             cccc-CHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCChHHEEECCCCCEEeccccceeecccCcc
Confidence            9975 88888865  56799999999999999999999   78899999999999999999999999999986432    


Q ss_pred             ----ccCCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHH--Hhccccccc-----------
Q 021659          189 ----NYATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQ--ESSISSSIH-----------  248 (309)
Q Consensus       189 ----~~~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~--~~~~~~~~~-----------  248 (309)
                          ...++..|.|||...+   .+.++|||||||++++|++|+.||.+.....+...  .........           
T Consensus       159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~  238 (372)
T cd07853         159 KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARA  238 (372)
T ss_pred             ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHH
Confidence                2345778999996533   46789999999999999999999976543322111  000000000           


Q ss_pred             cc-----ccCcCCC--CCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          249 RM-----IDPDLGG--SYDSKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       249 ~~-----~~~~l~~--~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      .+     ..+....  .........+.+++.+||+.||++|||+.|+++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  288 (372)
T cd07853         239 HILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH  288 (372)
T ss_pred             HHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence            00     0000000  0011113456677779999999999999999853

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=3.6e-36  Score=275.91  Aligned_cols=240  Identities=16%  Similarity=0.213  Sum_probs=183.5

Q ss_pred             cccccCCCceEEEEEEc------CCcEEEEEEeccccc--cHHHHHHHHHHHccCC-CCCcceEeeeEeC-CeeEEEEee
Q 021659           44 RIVYTNSHGAAYKARFQ------DGEVALVKEIQALNL--EKDAFYREIQLLGRLH-HRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~------~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~-h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      +.||+|+||.||+|++.      .+..||+|++.....  ..+.+.+|++++.++. ||||+++++++.. ...++|+||
T Consensus        43 ~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~  122 (401)
T cd05107          43 RTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEY  122 (401)
T ss_pred             hhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEec
Confidence            68999999999999853      346799999964322  2346889999999997 9999999998765 677899999


Q ss_pred             CCCCCHHHhhcCCC------------------------------------------------------------------
Q 021659          114 IENGSLKEHLNDPL------------------------------------------------------------------  127 (309)
Q Consensus       114 ~~~~sL~~~i~~~~------------------------------------------------------------------  127 (309)
                      +++|+|.+++....                                                                  
T Consensus       123 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (401)
T cd05107         123 CRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYA  202 (401)
T ss_pred             cCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhhhhhh
Confidence            99999999885321                                                                  


Q ss_pred             ------------------------------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCcee
Q 021659          128 ------------------------------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAK  177 (309)
Q Consensus       128 ------------------------------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~k  177 (309)
                                                    ...+++..+..++.+++.||.||   |+.+++|+||||+||+++.++.++
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~L---H~~~ivHrdlkp~NiLl~~~~~~k  279 (401)
T cd05107         203 DIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFL---ASKNCVHRDLAARNVLICEGKLVK  279 (401)
T ss_pred             hhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHH---hcCCcCcccCCcceEEEeCCCEEE
Confidence                                          12467778899999999999999   788999999999999999999999


Q ss_pred             Eeccccccccc---------ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccc
Q 021659          178 LSDVGFFNSVR---------NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISS  245 (309)
Q Consensus       178 l~dfg~~~~~~---------~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~  245 (309)
                      ++|||++....         ...++..|++||....  .+.++||||||++++||++ |..||............... +
T Consensus       280 L~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~-~  358 (401)
T cd05107         280 ICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKR-G  358 (401)
T ss_pred             EEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHc-C
Confidence            99999986432         1234567999996533  4778999999999999998 88898654322221111111 1


Q ss_pred             cccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhh
Q 021659          246 SIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEV  296 (309)
Q Consensus       246 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~  296 (309)
                      .     .+..+..    ....+.+++.+||..+|+.||++.+|++.|++++
T Consensus       359 ~-----~~~~p~~----~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~  400 (401)
T cd05107         359 Y-----RMAKPAH----ASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL  400 (401)
T ss_pred             C-----CCCCCCC----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence            0     0111111    1234556666999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=2.8e-35  Score=298.49  Aligned_cols=260  Identities=23%  Similarity=0.402  Sum_probs=202.7

Q ss_pred             cCHHHHHHhhcccccccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-Cee
Q 021659           30 FSYKDIKMATDGFHRIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKR  107 (309)
Q Consensus        30 ~~~~~i~~~~~~~~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~  107 (309)
                      ++++++..... ..+.||+|+||.||+|+. .++..||+|.+......   ...|++.+++++||||++++|++.+ ...
T Consensus       683 ~~~~~~~~~~~-~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~l~~l~HpnIv~~~~~~~~~~~~  758 (968)
T PLN00113        683 ITINDILSSLK-EENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI---PSSEIADMGKLQHPNIVKLIGLCRSEKGA  758 (968)
T ss_pred             hhHHHHHhhCC-cccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc---cHHHHHHHhhCCCCCcceEEEEEEcCCCC
Confidence            34444443322 235899999999999997 57889999988643322   2346889999999999999998865 667


Q ss_pred             EEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccc-
Q 021659          108 LLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNS-  186 (309)
Q Consensus       108 ~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~-  186 (309)
                      ++||||+++|+|.+++..     ++|..+..++.++++|++|||..++.+++||||||+||+++.++..++. |+.... 
T Consensus       759 ~lv~Ey~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~  832 (968)
T PLN00113        759 YLIHEYIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLL  832 (968)
T ss_pred             EEEEeCCCCCcHHHHHhc-----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccc
Confidence            899999999999999953     8899999999999999999976558899999999999999988887765 554332 


Q ss_pred             --ccccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCC----ccHHHHHHHhcccccccccccCcCCCC
Q 021659          187 --VRNYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGD----VDLIQWIQESSISSSIHRMIDPDLGGS  258 (309)
Q Consensus       187 --~~~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~  258 (309)
                        .....++..|+|||....  ++.++||||||+++|||+||+.||...    .....+............+.++.+...
T Consensus       833 ~~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  912 (968)
T PLN00113        833 CTDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGD  912 (968)
T ss_pred             ccCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCC
Confidence              223356789999997543  478999999999999999999998532    344555544433344555666666432


Q ss_pred             --CCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccc
Q 021659          259 --YDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQ  299 (309)
Q Consensus       259 --~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~  299 (309)
                        ....+..++.+++.+||+.||++|||+.|+++.|++.....
T Consensus       913 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~  955 (968)
T PLN00113        913 VSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSS  955 (968)
T ss_pred             CCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence              34566778889999999999999999999999999876633

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=1.6e-35  Score=255.78  Aligned_cols=236  Identities=20%  Similarity=0.251  Sum_probs=185.4

Q ss_pred             cccccccCCCceEEEEEEc-CCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEe--CCeeEEEEeeCC
Q 021659           42 FHRIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFST--GRKRLLVFDNIE  115 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~--~~~~~lv~e~~~  115 (309)
                      +.+.||+|++|.||++... +++.+++|.+.....   ..+.+.+|++++++++|+|++++.+.+.  +...++++||++
T Consensus         4 ~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~   83 (257)
T cd08223           4 FVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCE   83 (257)
T ss_pred             EEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccC
Confidence            3478999999999999964 478899999854332   3356889999999999999999998654  245789999999


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------  188 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------  188 (309)
                      +++|.+++.......+++.++..++.+++.|+.+|   |+.+++|+||+|+||+++.++.++|+|||++....       
T Consensus        84 ~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~l---H~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~  160 (257)
T cd08223          84 GGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYL---HEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAS  160 (257)
T ss_pred             CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCchhEEEecCCcEEEecccceEEecccCCccc
Confidence            99999999764456789999999999999999999   78899999999999999999999999999886443       


Q ss_pred             ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          189 NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       189 ~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                      ...+++.|++||....  .+.++|+||||+++++|++|+.||...... ....... .+..     +.+.    ......
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~-~~~~~~~-~~~~-----~~~~----~~~~~~  229 (257)
T cd08223         161 TLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN-SLVYRII-EGKL-----PPMP----KDYSPE  229 (257)
T ss_pred             cccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHH-hcCC-----CCCc----cccCHH
Confidence            2346788999997544  367899999999999999999999754322 2111111 1111     1111    122345


Q ss_pred             HHHHHHHccCCCCCCCCChHHHHHH
Q 021659          267 LLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      +.+++.+|+..+|+.||++.++++.
T Consensus       230 ~~~li~~~l~~~p~~Rp~~~~~l~~  254 (257)
T cd08223         230 LGELIATMLSKRPEKRPSVKSILRQ  254 (257)
T ss_pred             HHHHHHHHhccCcccCCCHHHHhcC
Confidence            6677779999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=4.1e-36  Score=282.68  Aligned_cols=242  Identities=21%  Similarity=0.228  Sum_probs=186.0

Q ss_pred             HHhhcccc--cccccCCCceEEEEEE-cCCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC-----
Q 021659           36 KMATDGFH--RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG-----  104 (309)
Q Consensus        36 ~~~~~~~~--~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~-----  104 (309)
                      ....++|.  +.||+|+||.||+++. .+++.||+|.+.....   ....+.+|+..+..++|+|++++.+.+..     
T Consensus        28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~  107 (496)
T PTZ00283         28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN  107 (496)
T ss_pred             cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence            33345554  6899999999999986 5689999999854332   23467889999999999999998874321     


Q ss_pred             ----CeeEEEEeeCCCCCHHHhhcCC--CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeE
Q 021659          105 ----RKRLLVFDNIENGSLKEHLNDP--LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKL  178 (309)
Q Consensus       105 ----~~~~lv~e~~~~~sL~~~i~~~--~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl  178 (309)
                          ...++||||+++|+|.+++...  ....+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||
T Consensus       108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~l---H~~~IiHrDLKP~NILl~~~~~vkL  184 (496)
T PTZ00283        108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHV---HSKHMIHRDIKSANILLCSNGLVKL  184 (496)
T ss_pred             cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHEEEeCCCCEEE
Confidence                1256999999999999988642  246799999999999999999999   7889999999999999999999999


Q ss_pred             eccccccccc---------ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccc
Q 021659          179 SDVGFFNSVR---------NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSI  247 (309)
Q Consensus       179 ~dfg~~~~~~---------~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~  247 (309)
                      +|||+++...         ...+++.|+|||....  .+.++||||||+++|+|++|+.||.+... ...+..... +..
T Consensus       185 ~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~-~~~~~~~~~-~~~  262 (496)
T PTZ00283        185 GDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM-EEVMHKTLA-GRY  262 (496)
T ss_pred             EecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHhc-CCC
Confidence            9999986432         2357889999997544  47889999999999999999999976432 222221111 111


Q ss_pred             cccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          248 HRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       248 ~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                          .+ ++..    ....+.+++.+||..||+.||++.++++.
T Consensus       263 ----~~-~~~~----~~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        263 ----DP-LPPS----ISPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             ----CC-CCCC----CCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence                11 1111    12445667779999999999999999853

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=1.9e-35  Score=255.36  Aligned_cols=236  Identities=17%  Similarity=0.223  Sum_probs=186.8

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEecccc---ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQALN---LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~---~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      .+.||+|+||.||.++. .++..+++|.+....   ...+.+.+|++++++++|+||+++++++.+ ...+++|||++++
T Consensus         5 ~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~   84 (256)
T cd08221           5 IRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGG   84 (256)
T ss_pred             eeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCC
Confidence            36899999999999985 458889999885432   334578899999999999999999997755 6778999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------cc
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NY  190 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~  190 (309)
                      +|.+.+.......+++..+..++.+++.|+.||   |+.+++|+||+|+||+++.++.+|++|||++....       ..
T Consensus        85 ~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---h~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~  161 (256)
T cd08221          85 TLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYI---HKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETV  161 (256)
T ss_pred             cHHHHHHhccccCCCHHHHHHHHHHHHHHHHHH---HhCCccccCCChHhEEEeCCCCEEECcCcceEEccccccccccc
Confidence            999999764456789999999999999999999   77899999999999999999999999999886442       23


Q ss_pred             CCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHH
Q 021659          191 ATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL  268 (309)
Q Consensus       191 ~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~  268 (309)
                      .++..|.+||...+  .+.++|+||||+++++|++|..||...... ........ +...    +. .    ......+.
T Consensus       162 ~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~-~~~~~~~~-~~~~----~~-~----~~~~~~~~  230 (256)
T cd08221         162 VGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL-NLVVKIVQ-GNYT----PV-V----SVYSSELI  230 (256)
T ss_pred             CCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHc-CCCC----CC-c----cccCHHHH
Confidence            46788999997543  467899999999999999999999764322 22211111 1111    10 0    11234566


Q ss_pred             HHHHHccCCCCCCCCChHHHHHHH
Q 021659          269 AVARLCIKTKDKPTISIPQISRYL  292 (309)
Q Consensus       269 ~l~~~cl~~dp~~Rps~~evl~~L  292 (309)
                      +++.+||..+|++||++.++++.+
T Consensus       231 ~~i~~~l~~~p~~R~s~~~ll~~~  254 (256)
T cd08221         231 SLVHSLLQQDPEKRPTADEVLDQP  254 (256)
T ss_pred             HHHHHHcccCcccCCCHHHHhhCc
Confidence            777799999999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=5.2e-36  Score=270.22  Aligned_cols=241  Identities=15%  Similarity=0.179  Sum_probs=179.2

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC-------CeeEEEEe
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG-------RKRLLVFD  112 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~-------~~~~lv~e  112 (309)
                      +.||.|+||.||++.. .+++.||+|.+.....   ..+.+.+|++++++++||||+++++++..       ...|++++
T Consensus        21 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~  100 (343)
T cd07878          21 TPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTN  100 (343)
T ss_pred             eecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEee
Confidence            5799999999999986 4678999999854322   23567789999999999999999986532       33578888


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc---
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN---  189 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~---  189 (309)
                      ++ +++|.+++..   ..+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++.....   
T Consensus       101 ~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~L---H~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  173 (343)
T cd07878         101 LM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYI---HSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDEMT  173 (343)
T ss_pred             cC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHH---HHCCeecccCChhhEEECCCCCEEEcCCccceecCCCcC
Confidence            87 6699988764   5699999999999999999999   788999999999999999999999999999875432   


Q ss_pred             -cCCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccc-cccccc------------c
Q 021659          190 -YATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISS-SIHRMI------------D  252 (309)
Q Consensus       190 -~~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~------------~  252 (309)
                       ..++..|+|||...+   .+.++|||||||++|+|++|+.||.+..............+ ......            .
T Consensus       174 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (343)
T cd07878         174 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQ  253 (343)
T ss_pred             CccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhh
Confidence             357889999997543   47889999999999999999999976543222111100000 000000            0


Q ss_pred             --CcCCCCC----CHHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          253 --PDLGGSY----DSKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       253 --~~l~~~~----~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                        +......    .......+.+++.+||+.||++|||+.|++..
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h  298 (343)
T cd07878         254 SLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH  298 (343)
T ss_pred             ccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence              0000000    00011235677779999999999999999943

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=6.9e-37  Score=278.06  Aligned_cols=237  Identities=17%  Similarity=0.279  Sum_probs=188.5

Q ss_pred             ccccccccCCCceEEEEEEc-CCcEEEEEEec---c--ccccHHHHHHHHHHHccCCCCCcceEeeeEeC---CeeEEEE
Q 021659           41 GFHRIVYTNSHGAAYKARFQ-DGEVALVKEIQ---A--LNLEKDAFYREIQLLGRLHHRHLLALQGFSTG---RKRLLVF  111 (309)
Q Consensus        41 ~~~~~lg~G~~~~v~~~~~~-~~~~va~K~~~---~--~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~---~~~~lv~  111 (309)
                      .|...||+|+|-+||+|... .|..||.=-++   .  .+...++|..|+.+|+.|+||||++++..+.+   ....+|+
T Consensus        43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT  122 (632)
T KOG0584|consen   43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT  122 (632)
T ss_pred             ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence            34568999999999999974 46666543332   1  22234789999999999999999999996544   2355899


Q ss_pred             eeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC-CceeEeccccccccc--
Q 021659          112 DNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN-FTAKLSDVGFFNSVR--  188 (309)
Q Consensus       112 e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~-~~~kl~dfg~~~~~~--  188 (309)
                      |.+..|+|..|+..  .+.++...+..|+.||++||.|||+ |..+|+|||||.+||+|+++ |.|||+|+|+|....  
T Consensus       123 EL~TSGtLr~Y~kk--~~~vn~kaik~W~RQILkGL~yLHs-~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s  199 (632)
T KOG0584|consen  123 ELFTSGTLREYRKK--HRRVNIKAIKSWCRQILKGLVYLHS-QDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS  199 (632)
T ss_pred             ecccCCcHHHHHHH--hccCCHHHHHHHHHHHHHHhhhhhc-CCCCccccccccceEEEcCCcCceeecchhHHHHhhcc
Confidence            99999999999987  6788889999999999999999998 67899999999999999987 899999999997654  


Q ss_pred             ---ccCCCCCCCCCCCCCC-CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHH
Q 021659          189 ---NYATMPHSSCPEDCST-QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKEL  264 (309)
Q Consensus       189 ---~~~~~~~~~~PE~~~~-~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  264 (309)
                         ...|||.|+|||.+-. +++..||||||..++||+|+..||..-.+..+-.+....+.      .|.-.......++
T Consensus       200 ~aksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGi------KP~sl~kV~dPev  273 (632)
T KOG0584|consen  200 HAKSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGI------KPAALSKVKDPEV  273 (632)
T ss_pred             ccceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCC------CHHHhhccCCHHH
Confidence               3489999999997654 68999999999999999999999987666555444332221      1221122233445


Q ss_pred             HHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          265 KKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       265 ~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      +++++   +|+.. ..+|||+.|+|.
T Consensus       274 r~fIe---kCl~~-~~~R~sa~eLL~  295 (632)
T KOG0584|consen  274 REFIE---KCLAT-KSERLSAKELLK  295 (632)
T ss_pred             HHHHH---HHhcC-chhccCHHHHhh
Confidence            55555   99999 999999999994

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=9.2e-36  Score=260.47  Aligned_cols=232  Identities=19%  Similarity=0.230  Sum_probs=175.9

Q ss_pred             ccccCCCceEEEEEEcC-------------------------CcEEEEEEecccccc-HHHHHHHHHHHccCCCCCcceE
Q 021659           45 IVYTNSHGAAYKARFQD-------------------------GEVALVKEIQALNLE-KDAFYREIQLLGRLHHRHLLAL   98 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~~-------------------------~~~va~K~~~~~~~~-~~~~~~ei~~l~~l~h~niv~~   98 (309)
                      +||+|+||.||+|+...                         ...|++|.+...... ...+.+|+.+++.++||||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            59999999999998421                         134788887543322 3468889999999999999999


Q ss_pred             eeeEeC-CeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCC---
Q 021659           99 QGFSTG-RKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENF---  174 (309)
Q Consensus        99 ~~~~~~-~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~---  174 (309)
                      ++++.+ ...++||||+++++|..++... ...+++..+..++.|+++||+||   |+++++||||||+||+++..+   
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~l---H~~~iiH~dlkp~Nill~~~~~~~  157 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYL---EDKNLVHGNVCAKNILLARLGLAE  157 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHH---HcCCccCCCCCcccEEEeccCccc
Confidence            998765 6778999999999999988642 35688999999999999999999   788999999999999997543   


Q ss_pred             ----ceeEecccccccc---cccCCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHH-hCCCCCCCCccHHHHHHHhcc
Q 021659          175 ----TAKLSDVGFFNSV---RNYATMPHSSCPEDCST---QDCSNIIFQLGVLILELV-TGQSPEEGDVDLIQWIQESSI  243 (309)
Q Consensus       175 ----~~kl~dfg~~~~~---~~~~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~-tg~~p~~~~~~~~~~~~~~~~  243 (309)
                          .++++|||++...   ....++..|++||....   .+.++||||||+++||++ +|+.||......... .....
T Consensus       158 ~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~-~~~~~  236 (274)
T cd05076         158 GTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKE-RFYEK  236 (274)
T ss_pred             CccceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHH-HHHHh
Confidence                4899999987533   22346678999996533   478899999999999985 699998754321110 00000


Q ss_pred             cccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHh
Q 021659          244 SSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQ  293 (309)
Q Consensus       244 ~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~  293 (309)
                      .        ...+...    ...+.+++.+||+.+|++|||+.++++.|.
T Consensus       237 ~--------~~~~~~~----~~~~~~li~~cl~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         237 K--------HRLPEPS----CKELATLISQCLTYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             c--------cCCCCCC----ChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence            0        0111111    134667777999999999999999998873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.9e-37  Score=280.97  Aligned_cols=233  Identities=18%  Similarity=0.204  Sum_probs=187.0

Q ss_pred             ccccCCCceEEEEEEcC-CcEEEEEEec-cccccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHHH
Q 021659           45 IVYTNSHGAAYKARFQD-GEVALVKEIQ-ALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLKE  121 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~~-~~~va~K~~~-~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~~  121 (309)
                      .||+|.||+||-|+..+ +..+|+|.++ ......+-+..||.+.++|+|.|||+++|.+.. +..-+.||.++||||.+
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs  661 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS  661 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence            79999999999999744 5678999884 344456678999999999999999999997765 55558899999999999


Q ss_pred             hhcCCCCCCC--CHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeC-CCCceeEecccccccc-------cccC
Q 021659          122 HLNDPLKTPL--DWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLD-ENFTAKLSDVGFFNSV-------RNYA  191 (309)
Q Consensus       122 ~i~~~~~~~l--~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~-~~~~~kl~dfg~~~~~-------~~~~  191 (309)
                      ++... =+++  ++.+...+.+||++||.||   |++.|+|||||-+|++++ -.|.+||+|||.++.+       ....
T Consensus       662 LLrsk-WGPlKDNEstm~fYtkQILeGLkYL---Hen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFT  737 (1226)
T KOG4279|consen  662 LLRSK-WGPLKDNESTMNFYTKQILEGLKYL---HENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFT  737 (1226)
T ss_pred             HHHhc-cCCCccchhHHHHHHHHHHHHhhhh---hhcceeeccccCCcEEEeeccceEEecccccchhhccCCccccccc
Confidence            99762 2445  7889999999999999999   888999999999999996 4689999999988644       3567


Q ss_pred             CCCCCCCCCC----CCCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          192 TMPHSSCPED----CSTQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       192 ~~~~~~~PE~----~~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ||..|+|||.    -++++.++|||||||++.||.||++||........-+...-..     ..-|.+    +.....+.
T Consensus       738 GTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmy-----KvHP~i----Peelsaea  808 (1226)
T KOG4279|consen  738 GTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMY-----KVHPPI----PEELSAEA  808 (1226)
T ss_pred             cchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcce-----ecCCCC----cHHHHHHH
Confidence            8999999995    4566899999999999999999999997544433322211110     011222    23345677


Q ss_pred             HHHHHHccCCCCCCCCChHHHHH
Q 021659          268 LAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ..++++|+.+||..||++.+++.
T Consensus       809 k~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  809 KNFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             HHHHHHHcCCCcccCccHHHhcc
Confidence            78888999999999999999983

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6e-36  Score=268.48  Aligned_cols=229  Identities=17%  Similarity=0.183  Sum_probs=174.2

Q ss_pred             cccCCCceEEEEEEc-CCcEEEEEEeccccc----cHHHHHHHHHHHccC---CCCCcceEeeeEe-CCeeEEEEeeCCC
Q 021659           46 VYTNSHGAAYKARFQ-DGEVALVKEIQALNL----EKDAFYREIQLLGRL---HHRHLLALQGFST-GRKRLLVFDNIEN  116 (309)
Q Consensus        46 lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~----~~~~~~~ei~~l~~l---~h~niv~~~~~~~-~~~~~lv~e~~~~  116 (309)
                      ||+|+||.||+|+.. +++.||+|++.....    .......|..++..+   .||||+.+++.+. +...|+||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            699999999999964 588999999854321    122345666666655   6999999999665 4678899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------c
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------N  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~  189 (309)
                      ++|.+++..  ...+++..+..++.|++.||+||   |+.+++||||||+||+++.++.++|+|||++....       .
T Consensus        81 g~L~~~l~~--~~~~~~~~~~~~~~qil~al~~L---H~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~  155 (330)
T cd05586          81 GELFWHLQK--EGRFSEDRAKFYIAELVLALEHL---HKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNT  155 (330)
T ss_pred             ChHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccC
Confidence            999999876  56799999999999999999999   78899999999999999999999999999976421       2


Q ss_pred             cCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          190 YATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       190 ~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                      ..++..|+|||...   ..+.++|||||||++|+|++|+.||...... +....... +.      ..+.....+   ..
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~-~~~~~i~~-~~------~~~~~~~~~---~~  224 (330)
T cd05586         156 FCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQ-QMYRNIAF-GK------VRFPKNVLS---DE  224 (330)
T ss_pred             ccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHH-HHHHHHHc-CC------CCCCCccCC---HH
Confidence            35788999999643   3578899999999999999999999764322 21111111 00      111111112   34


Q ss_pred             HHHHHHHccCCCCCCCCC----hHHHHH
Q 021659          267 LLAVARLCIKTKDKPTIS----IPQISR  290 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rps----~~evl~  290 (309)
                      +.+++.+||..||++||+    +.++++
T Consensus       225 ~~~li~~~L~~~P~~R~~~~~~~~~ll~  252 (330)
T cd05586         225 GRQFVKGLLNRNPQHRLGAHRDAVELKE  252 (330)
T ss_pred             HHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence            445666999999999984    556554

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=3.6e-36  Score=264.58  Aligned_cols=237  Identities=23%  Similarity=0.314  Sum_probs=182.7

Q ss_pred             cccccCCCceEEEEEEc------CCcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeC
Q 021659           44 RIVYTNSHGAAYKARFQ------DGEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNI  114 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~------~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~  114 (309)
                      +.||+|+||.||++...      ++..+|+|.+.....  ..+.+.+|+.++++++||||+++++++.. ...++++||+
T Consensus        11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   90 (288)
T cd05050          11 RDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEYM   90 (288)
T ss_pred             ccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEEecC
Confidence            68999999999999853      467899998854322  24568899999999999999999997765 6778999999


Q ss_pred             CCCCHHHhhcCC--------------------CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCC
Q 021659          115 ENGSLKEHLNDP--------------------LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENF  174 (309)
Q Consensus       115 ~~~sL~~~i~~~--------------------~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~  174 (309)
                      ++++|.+++...                    ....+++..++.++.+++.||.+|   |.++++||||+|+||+++.++
T Consensus        91 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~l---H~~~i~H~dl~p~nil~~~~~  167 (288)
T cd05050          91 AYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYL---SERKFVHRDLATRNCLVGENM  167 (288)
T ss_pred             CCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHH---HhCCeecccccHhheEecCCC
Confidence            999999998632                    113578889999999999999999   778999999999999999999


Q ss_pred             ceeEeccccccccc---------ccCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhc
Q 021659          175 TAKLSDVGFFNSVR---------NYATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESS  242 (309)
Q Consensus       175 ~~kl~dfg~~~~~~---------~~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~  242 (309)
                      .++++|||++....         ....+..|++||..  ...+.++||||||+++|+|++ |..||.+... ....... 
T Consensus       168 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~-~~~~~~~-  245 (288)
T cd05050         168 VVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH-EEVIYYV-  245 (288)
T ss_pred             ceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHH-
Confidence            99999999876432         12234569999964  335788999999999999997 8888864322 1111111 


Q ss_pred             ccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhh
Q 021659          243 ISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQN  294 (309)
Q Consensus       243 ~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~  294 (309)
                      ..+....     ..    ......+.+++.+||+.+|++|||+.|+++.|++
T Consensus       246 ~~~~~~~-----~~----~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         246 RDGNVLS-----CP----DNCPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             hcCCCCC-----CC----CCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence            1111100     01    1123456677789999999999999999999974

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=2.5e-35  Score=255.98  Aligned_cols=232  Identities=16%  Similarity=0.212  Sum_probs=176.0

Q ss_pred             cccccCCCceEEEEEEcC-------------CcEEEEEEeccccc-cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeE
Q 021659           44 RIVYTNSHGAAYKARFQD-------------GEVALVKEIQALNL-EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRL  108 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~-------------~~~va~K~~~~~~~-~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~  108 (309)
                      +.||+|+||.||+|...+             ...+++|.+..... ....+..|+.++..++||||+++++++.. ...+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            358999999999998532             22478887754332 23467889999999999999999998765 5678


Q ss_pred             EEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCc-------eeEecc
Q 021659          109 LVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFT-------AKLSDV  181 (309)
Q Consensus       109 lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~-------~kl~df  181 (309)
                      ++|||+++++|..++... ...+++..+..++.|+++||+||   |+++++|+||+|+||+++.++.       ++++||
T Consensus        81 lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~  156 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRK-SDVLTTPWKFKVAKQLASALSYL---EDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDP  156 (262)
T ss_pred             EEEecccCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHh---hhCCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence            999999999999887642 35689999999999999999999   8889999999999999986654       899999


Q ss_pred             ccccccc---ccCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHH-hCCCCCCCCccHHHHHHHhcccccccccccCc
Q 021659          182 GFFNSVR---NYATMPHSSCPEDCS---TQDCSNIIFQLGVLILELV-TGQSPEEGDVDLIQWIQESSISSSIHRMIDPD  254 (309)
Q Consensus       182 g~~~~~~---~~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~-tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (309)
                      |++....   ...++..|+|||...   ..+.++||||||+++|+|+ +|..|+........ .. ... .. ....   
T Consensus       157 g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-~~-~~~-~~-~~~~---  229 (262)
T cd05077         157 GIPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK-ER-FYE-GQ-CMLV---  229 (262)
T ss_pred             CCCccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH-HH-HHh-cC-ccCC---
Confidence            9876443   234677899999643   3477899999999999997 58888765432111 10 000 00 0000   


Q ss_pred             CCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHH
Q 021659          255 LGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYL  292 (309)
Q Consensus       255 l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L  292 (309)
                         ...   ..++.+++.+||+.||++||++.++++.|
T Consensus       230 ---~~~---~~~~~~li~~cl~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         230 ---TPS---CKELADLMTHCMNYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             ---CCC---hHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence               111   23556677799999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=1.1e-35  Score=256.46  Aligned_cols=233  Identities=19%  Similarity=0.232  Sum_probs=185.0

Q ss_pred             cccccCCCceEEEEEEcC-CcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHHH
Q 021659           44 RIVYTNSHGAAYKARFQD-GEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLKE  121 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~-~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~~  121 (309)
                      +.||+|++|.||++...+ +..+++|.+..... .+.+.+|++.+++++|+||+++++++.. ...++++||+++++|.+
T Consensus         9 ~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~   87 (256)
T cd06612           9 EKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSD   87 (256)
T ss_pred             hhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcHHH
Confidence            579999999999999754 78999999865433 6789999999999999999999997654 67789999999999999


Q ss_pred             hhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------cCCCC
Q 021659          122 HLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------YATMP  194 (309)
Q Consensus       122 ~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------~~~~~  194 (309)
                      ++... ...+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++.++|+|||++.....       ..++.
T Consensus        88 ~l~~~-~~~l~~~~~~~~~~~l~~~l~~l---h~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  163 (256)
T cd06612          88 IMKIT-NKTLTEEEIAAILYQTLKGLEYL---HSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTP  163 (256)
T ss_pred             HHHhC-ccCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCcceEEECCCCcEEEcccccchhcccCccccccccCCc
Confidence            98642 36789999999999999999999   778999999999999999999999999998865432       23567


Q ss_pred             CCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHH
Q 021659          195 HSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVAR  272 (309)
Q Consensus       195 ~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~  272 (309)
                      .|.+||...+  .+.++||||||+++++|++|+.||..............       ...+...  ........+.+++.
T Consensus       164 ~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~-------~~~~~~~--~~~~~~~~~~~~i~  234 (256)
T cd06612         164 FWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPN-------KPPPTLS--DPEKWSPEFNDFVK  234 (256)
T ss_pred             cccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhcc-------CCCCCCC--chhhcCHHHHHHHH
Confidence            8999996433  46789999999999999999999975433222111100       0001111  11122345667777


Q ss_pred             HccCCCCCCCCChHHHHH
Q 021659          273 LCIKTKDKPTISIPQISR  290 (309)
Q Consensus       273 ~cl~~dp~~Rps~~evl~  290 (309)
                      +||+.||+.|||+.|++.
T Consensus       235 ~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         235 KCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             HHHhcChhhCcCHHHHhc
Confidence            999999999999999985

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=5.5e-36  Score=280.81  Aligned_cols=255  Identities=16%  Similarity=0.222  Sum_probs=181.6

Q ss_pred             HHHHhhcccc--cccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccCCC------CCcceEeeeEeC
Q 021659           34 DIKMATDGFH--RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRLHH------RHLLALQGFSTG  104 (309)
Q Consensus        34 ~i~~~~~~~~--~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h------~niv~~~~~~~~  104 (309)
                      ++...++.|.  +.||+|+||.||+|.. ..++.||+|++.........+..|+++++.++|      .+++.+++++..
T Consensus       123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~  202 (467)
T PTZ00284        123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN  202 (467)
T ss_pred             ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence            3433445554  5899999999999996 457889999986543334456667777776654      458888887654


Q ss_pred             --CeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCC-CCeeecccCCCceeeCCCC-------
Q 021659          105 --RKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSN-LPMYYVSISSSSIMLDENF-------  174 (309)
Q Consensus       105 --~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~-~~i~H~dl~p~nill~~~~-------  174 (309)
                        .+.++||+++ +++|.+++..  ...+++..+..++.|++.||.||   |. .+|+||||||+|||++.++       
T Consensus       203 ~~~~~~iv~~~~-g~~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~yL---H~~~gIiHrDlKP~NILl~~~~~~~~~~~  276 (467)
T PTZ00284        203 ETGHMCIVMPKY-GPCLLDWIMK--HGPFSHRHLAQIIFQTGVALDYF---HTELHLMHTDLKPENILMETSDTVVDPVT  276 (467)
T ss_pred             CCceEEEEEecc-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HhcCCeecCCCCHHHEEEecCCccccccc
Confidence              4677888887 6689888876  46799999999999999999999   54 6999999999999998765       


Q ss_pred             ---------ceeEeccccccccc----ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHH
Q 021659          175 ---------TAKLSDVGFFNSVR----NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQ  239 (309)
Q Consensus       175 ---------~~kl~dfg~~~~~~----~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~  239 (309)
                               .+||+|||.+....    ...+|..|+|||...+  ++.++|||||||++|||++|+.||.+.........
T Consensus       277 ~~~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~  356 (467)
T PTZ00284        277 NRALPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHL  356 (467)
T ss_pred             ccccCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence                     49999999875332    3467889999997543  57889999999999999999999986544322111


Q ss_pred             Hhccccccc-------------ccc------cCcCC--------CCC---CHHHHHHHHHHHHHccCCCCCCCCChHHHH
Q 021659          240 ESSISSSIH-------------RMI------DPDLG--------GSY---DSKELKKLLAVARLCIKTKDKPTISIPQIS  289 (309)
Q Consensus       240 ~~~~~~~~~-------------~~~------~~~l~--------~~~---~~~~~~~l~~l~~~cl~~dp~~Rps~~evl  289 (309)
                      .....+..+             .+.      .+...        ...   .......+.+|+.+||++||++|||+.|++
T Consensus       357 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L  436 (467)
T PTZ00284        357 MEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMT  436 (467)
T ss_pred             HHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHh
Confidence            000000000             000      00000        000   001124566788899999999999999999


Q ss_pred             H--HHhh
Q 021659          290 R--YLQN  294 (309)
Q Consensus       290 ~--~L~~  294 (309)
                      +  .+.+
T Consensus       437 ~Hp~~~~  443 (467)
T PTZ00284        437 THPYVLK  443 (467)
T ss_pred             cCccccc
Confidence            5  4443

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=8.5e-36  Score=265.64  Aligned_cols=242  Identities=18%  Similarity=0.248  Sum_probs=184.7

Q ss_pred             cccccccCCCceEEEEEEc--------CCcEEEEEEeccccc--cHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEE
Q 021659           42 FHRIVYTNSHGAAYKARFQ--------DGEVALVKEIQALNL--EKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLL  109 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~--------~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~l  109 (309)
                      +.+.||+|+||.||+++..        ....+|+|.+.....  ....+.+|+++++++ +||||+++++++.. ...++
T Consensus        16 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l   95 (314)
T cd05099          16 LGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYV   95 (314)
T ss_pred             eeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEE
Confidence            4478999999999999742        245689998764322  234688999999999 69999999998765 56789


Q ss_pred             EEeeCCCCCHHHhhcCCC--------------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCc
Q 021659          110 VFDNIENGSLKEHLNDPL--------------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFT  175 (309)
Q Consensus       110 v~e~~~~~sL~~~i~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~  175 (309)
                      ++||+++++|.+++....              ...+++.++..++.|++.||.||   |+.+++|+||||+||+++.++.
T Consensus        96 v~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~l---H~~gi~H~dlkp~Nill~~~~~  172 (314)
T cd05099          96 IVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYL---ESRRCIHRDLAARNVLVTEDNV  172 (314)
T ss_pred             EEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHH---HHCCeeeccccceeEEEcCCCc
Confidence            999999999999986421              24588999999999999999999   7889999999999999999999


Q ss_pred             eeEecccccccccc---------cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcc
Q 021659          176 AKLSDVGFFNSVRN---------YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSI  243 (309)
Q Consensus       176 ~kl~dfg~~~~~~~---------~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~  243 (309)
                      +||+|||++.....         ..++..|++||...  ..+.++||||||+++|+|++ |..||..... .........
T Consensus       173 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~-~~~~~~~~~  251 (314)
T cd05099         173 MKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV-EELFKLLRE  251 (314)
T ss_pred             EEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHc
Confidence            99999999864421         12235699999643  34788999999999999999 8889865432 222211111


Q ss_pred             cccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          244 SSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       244 ~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                       ...     .....    .....+.+++.+||..+|++|||+.++++.|++...
T Consensus       252 -~~~-----~~~~~----~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~  295 (314)
T cd05099         252 -GHR-----MDKPS----NCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA  295 (314)
T ss_pred             -CCC-----CCCCC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence             110     01111    112355567779999999999999999999987754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=2.9e-35  Score=258.49  Aligned_cols=238  Identities=16%  Similarity=0.207  Sum_probs=183.1

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCC
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGS  118 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~s  118 (309)
                      .+.||+|+||.||++... ++..||+|.+....  ...+.+.+|++++++++|+||+++++.+. +...++|+||+++++
T Consensus         6 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~   85 (286)
T cd06622           6 LDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGS   85 (286)
T ss_pred             hhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCCC
Confidence            367999999999999975 68899999885432  22357889999999999999999999654 577889999999999


Q ss_pred             HHHhhcCCC-CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-----ccCC
Q 021659          119 LKEHLNDPL-KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-----NYAT  192 (309)
Q Consensus       119 L~~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-----~~~~  192 (309)
                      |..++.... ...+++..+..++.+++.||.|||  ++.+++|+||+|+||+++.++.++++|||++....     ...+
T Consensus        86 l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH--~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  163 (286)
T cd06622          86 LDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLK--EEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTNIG  163 (286)
T ss_pred             HHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHH--hcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCccccCCC
Confidence            999886521 247899999999999999999995  24699999999999999999999999999876432     2345


Q ss_pred             CCCCCCCCCCCC--------CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHH-HhcccccccccccCcCCCCCCHHH
Q 021659          193 MPHSSCPEDCST--------QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQ-ESSISSSIHRMIDPDLGGSYDSKE  263 (309)
Q Consensus       193 ~~~~~~PE~~~~--------~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~  263 (309)
                      +..|++||....        .+.++|+||||+++++|++|+.||........... .......     .+.+    ....
T Consensus       164 ~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-----~~~~----~~~~  234 (286)
T cd06622         164 CQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGD-----PPTL----PSGY  234 (286)
T ss_pred             ccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcC-----CCCC----Cccc
Confidence            678999996532        25689999999999999999999975432111100 0000110     1111    1123


Q ss_pred             HHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          264 LKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       264 ~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      ...+..++.+||+.+|+.||++.++++.
T Consensus       235 ~~~~~~li~~~l~~~p~~Rp~~~~l~~~  262 (286)
T cd06622         235 SDDAQDFVAKCLNKIPNRRPTYAQLLEH  262 (286)
T ss_pred             CHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence            3455667779999999999999999863

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.5e-35  Score=254.28  Aligned_cols=237  Identities=22%  Similarity=0.240  Sum_probs=185.2

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEeccccc-cHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCH
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL-EKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSL  119 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~-~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL  119 (309)
                      .+.||.|++|.||++... +++.+++|.+..... ..+.+.+|++++++++||||+++++++. ....+++|||+++++|
T Consensus         8 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l   87 (262)
T cd06613           8 IQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSL   87 (262)
T ss_pred             EEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcH
Confidence            368999999999999974 578899999864332 3567899999999999999999999665 4678899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------cCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------YAT  192 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------~~~  192 (309)
                      .+++... ...+++..+..++.|++.||.||   |+.+++|+||+|+||+++.++.++|+|||.+.....       ..+
T Consensus        88 ~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~l---h~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~  163 (262)
T cd06613          88 QDIYQVT-RGPLSELQIAYVCRETLKGLAYL---HETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIG  163 (262)
T ss_pred             HHHHHhh-ccCCCHHHHHHHHHHHHHHHHHH---HhCCceecCCChhhEEECCCCCEEECccccchhhhhhhhccccccC
Confidence            9988752 26789999999999999999999   788999999999999999999999999998764332       245


Q ss_pred             CCCCCCCCCCC-----CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          193 MPHSSCPEDCS-----TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       193 ~~~~~~PE~~~-----~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      +..|.+||...     ..+.++|+||||+++++|++|+.||........... .....    ...+.+.  ........+
T Consensus       164 ~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~-~~~~~----~~~~~~~--~~~~~~~~~  236 (262)
T cd06613         164 TPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFL-ISKSN----FPPPKLK--DKEKWSPVF  236 (262)
T ss_pred             CccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHhcc----CCCcccc--chhhhhHHH
Confidence            67899999743     346789999999999999999999975433222111 11110    0011111  112224556


Q ss_pred             HHHHHHccCCCCCCCCChHHHHH
Q 021659          268 LAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .+++.+||..+|..|||+.+++.
T Consensus       237 ~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         237 HDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             HHHHHHHcCCChhhCCCHHHHhc
Confidence            77777999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=8.7e-36  Score=261.72  Aligned_cols=236  Identities=18%  Similarity=0.222  Sum_probs=185.0

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      +.||+|++|.||++... ++..||+|.+....  ...+.+.+|+++++.++||||+++++++.. ...++|+||+++++|
T Consensus        11 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   90 (284)
T cd06620          11 SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSL   90 (284)
T ss_pred             HHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCCCH
Confidence            67999999999999964 57889999875432  234678899999999999999999997654 778899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-----ccCCCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-----NYATMP  194 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-----~~~~~~  194 (309)
                      .+++..  ...+++..+..++.+++.||.|||  +..+++|+||+|+||+++.++.++|+|||++....     ...++.
T Consensus        91 ~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH--~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~~~~~~  166 (284)
T cd06620          91 DRIYKK--GGPIPVEILGKIAVAVVEGLTYLY--NVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVGTS  166 (284)
T ss_pred             HHHHHh--ccCCCHHHHHHHHHHHHHHHHHHH--HhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhccCccccCc
Confidence            999876  467899999999999999999995  24589999999999999999999999999875432     235778


Q ss_pred             CCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccH----------HHHHHHhcccccccccccCcCCCCCCHH
Q 021659          195 HSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDL----------IQWIQESSISSSIHRMIDPDLGGSYDSK  262 (309)
Q Consensus       195 ~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~----------~~~~~~~~~~~~~~~~~~~~l~~~~~~~  262 (309)
                      .|++||...  ..+.++|+|||||+++++++|..||......          ..........      ..+.+.   ...
T Consensus       167 ~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~---~~~  237 (284)
T cd06620         167 TYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQE------PPPRLP---SSD  237 (284)
T ss_pred             ccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhc------cCCCCC---chh
Confidence            999999743  3467899999999999999999999754321          1111111100      011111   111


Q ss_pred             HHHHHHHHHHHccCCCCCCCCChHHHHHHH
Q 021659          263 ELKKLLAVARLCIKTKDKPTISIPQISRYL  292 (309)
Q Consensus       263 ~~~~l~~l~~~cl~~dp~~Rps~~evl~~L  292 (309)
                      ....+.+++.+||++||++|||+.|+++..
T Consensus       238 ~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~  267 (284)
T cd06620         238 FPEDLRDFVDACLLKDPTERPTPQQLCAMP  267 (284)
T ss_pred             cCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence            234566777799999999999999999753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=1.3e-35  Score=260.38  Aligned_cols=242  Identities=19%  Similarity=0.236  Sum_probs=183.7

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc---ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN---LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~---~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~s  118 (309)
                      +.||+|++|.||++... +++.||+|++....   ...+.+.+|++++++++|+|++++++++.. ...++||||+++++
T Consensus         7 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~   86 (286)
T cd07847           7 SKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTV   86 (286)
T ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCccH
Confidence            57999999999999975 58899999885332   223567899999999999999999997654 67789999999988


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------cC
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------YA  191 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------~~  191 (309)
                      |..++..  ...+++..+..++.|++.||.||   |+.+++|+||+|+||+++.++.++|+|||++.....       ..
T Consensus        87 l~~~~~~--~~~~~~~~~~~~~~ql~~~l~~L---H~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  161 (286)
T cd07847          87 LNELEKN--PRGVPEHLIKKIIWQTLQAVNFC---HKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDYV  161 (286)
T ss_pred             HHHHHhC--CCCCCHHHHHHHHHHHHHHHHHH---HHCCceecCCChhhEEEcCCCcEEECccccceecCCCcccccCcc
Confidence            8887755  45689999999999999999999   778999999999999999999999999999865432       24


Q ss_pred             CCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccc--------------ccccccCc
Q 021659          192 TMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSS--------------IHRMIDPD  254 (309)
Q Consensus       192 ~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~  254 (309)
                      ++..|.+||...+   .+.++|+||||+++++|++|+.||.+................              ......+.
T Consensus       162 ~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (286)
T cd07847         162 ATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPE  241 (286)
T ss_pred             cccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCC
Confidence            5678999997432   467899999999999999999999765433222111000000              00000111


Q ss_pred             CCCCCC-----HHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          255 LGGSYD-----SKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       255 l~~~~~-----~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ......     ......+.+++.+||+++|+.||++.|++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         242 PETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             cccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence            100000     111356677888999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=8.5e-36  Score=271.03  Aligned_cols=240  Identities=14%  Similarity=0.174  Sum_probs=179.8

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc---ccHHHHHHHHHHHccCCCCCcceEeeeEeC-------CeeEEEEe
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN---LEKDAFYREIQLLGRLHHRHLLALQGFSTG-------RKRLLVFD  112 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~---~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-------~~~~lv~e  112 (309)
                      +.||+|+||.||++.. ..++.||+|.+....   ...+.+.+|+.+++.++||||+++++++..       ...|+|||
T Consensus        30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e  109 (364)
T cd07875          30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME  109 (364)
T ss_pred             EEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEEEe
Confidence            6899999999999996 457889999985432   234567899999999999999999986532       34689999


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc----
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----  188 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----  188 (309)
                      |+++ +|.+.+.    ..+++..+..++.|++.||.||   |+++++||||||+||+++.++.+||+|||++....    
T Consensus       110 ~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~  181 (364)
T cd07875         110 LMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM  181 (364)
T ss_pred             CCCC-CHHHHHH----hcCCHHHHHHHHHHHHHHHHHH---hhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCCCc
Confidence            9976 7777774    3478899999999999999999   78899999999999999999999999999986543    


Q ss_pred             --ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccc-c-----------------
Q 021659          189 --NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISS-S-----------------  246 (309)
Q Consensus       189 --~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~-~-----------------  246 (309)
                        ...++..|+|||...+  .+.++|||||||++|+|++|+.||.+......+.......+ .                 
T Consensus       182 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (364)
T cd07875         182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE  261 (364)
T ss_pred             ccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHh
Confidence              2357889999997543  47789999999999999999999976544332211110000 0                 


Q ss_pred             -ccc--------cccCcCC---CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          247 -IHR--------MIDPDLG---GSYDSKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       247 -~~~--------~~~~~l~---~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                       .+.        +....+.   ..........+.+++.+||+.||++|||+.|+++.
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h  318 (364)
T cd07875         262 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  318 (364)
T ss_pred             hCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence             000        0000000   00000112456677779999999999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.2e-36  Score=290.27  Aligned_cols=242  Identities=20%  Similarity=0.341  Sum_probs=191.2

Q ss_pred             cccccccCCCceEEEEEEcC--Cc----EEEEEEeccc--cccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEe
Q 021659           42 FHRIVYTNSHGAAYKARFQD--GE----VALVKEIQAL--NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFD  112 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~--~~----~va~K~~~~~--~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e  112 (309)
                      +.+.||+|.||.||.|.+.+  +.    .||+|.+...  ..+..+|.+|.-++.+++||||++++|.|-+ ...++++|
T Consensus       696 l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~le  775 (1025)
T KOG1095|consen  696 LLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLE  775 (1025)
T ss_pred             eeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEeh
Confidence            33579999999999999743  33    3899999654  3445689999999999999999999998866 66779999


Q ss_pred             eCCCCCHHHhhcCC-----CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc
Q 021659          113 NIENGSLKEHLNDP-----LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV  187 (309)
Q Consensus       113 ~~~~~sL~~~i~~~-----~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~  187 (309)
                      ||++|+|..+|+..     ....++..+.+.++.+|++|+.||   +++.++||||..+|.|++....+||+|||+|+..
T Consensus       776 yM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YL---e~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDi  852 (1025)
T KOG1095|consen  776 YMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYL---ESKHFVHRDLAARNCLLDERRVVKIADFGLARDI  852 (1025)
T ss_pred             hcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHH---HhCCCcCcchhhhheeecccCcEEEcccchhHhh
Confidence            99999999999763     245688999999999999999999   8889999999999999999999999999999732


Q ss_pred             c--------cc-CCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcC
Q 021659          188 R--------NY-ATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDL  255 (309)
Q Consensus       188 ~--------~~-~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l  255 (309)
                      .        .. .-...|++||.+.  .++.++||||||+++||++| |..||.+..+..-.. .....+   .+..|..
T Consensus       853 y~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~-~~~~gg---RL~~P~~  928 (1025)
T KOG1095|consen  853 YDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLL-DVLEGG---RLDPPSY  928 (1025)
T ss_pred             hhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHH-HHHhCC---ccCCCCC
Confidence            1        11 2235899999754  45889999999999999998 889998665433222 122222   2222221


Q ss_pred             CCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          256 GGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       256 ~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                             +...+-+++..||+.+|++||+...+++.+....+
T Consensus       929 -------CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~  963 (1025)
T KOG1095|consen  929 -------CPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISN  963 (1025)
T ss_pred             -------CChHHHHHHHHHccCChhhCccHHHHHhhhhhhhh
Confidence                   23445578889999999999999999987765543

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=1e-35  Score=260.25  Aligned_cols=231  Identities=19%  Similarity=0.255  Sum_probs=182.3

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      +.||+|++|.||+|... ++..||+|.+....  ...+.+.+|++++++++||||+++++++.. ...++|+||+++++|
T Consensus        10 ~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   89 (277)
T cd06642          10 ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSA   89 (277)
T ss_pred             HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCCcH
Confidence            56999999999999864 57889999885333  223568899999999999999999997654 678899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------cCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------YAT  192 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------~~~  192 (309)
                      .+++..   ..+++..+..++.+++.|+.||   |+++++|+||+|+||+++.++.++++|||++.....       ..+
T Consensus        90 ~~~~~~---~~~~~~~~~~~~~~i~~~l~~l---H~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  163 (277)
T cd06642          90 LDLLKP---GPLEETYIATILREILKGLDYL---HSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVG  163 (277)
T ss_pred             HHHhhc---CCCCHHHHHHHHHHHHHHHHHH---hcCCeeccCCChheEEEeCCCCEEEccccccccccCcchhhhcccC
Confidence            998864   5689999999999999999999   788999999999999999999999999998864432       245


Q ss_pred             CCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          193 MPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       193 ~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      +..|++||....  .+.++|+||||+++++|++|+.|+.......... ..      .....+.+.    ......+.++
T Consensus       164 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~-~~------~~~~~~~~~----~~~~~~~~~l  232 (277)
T cd06642         164 TPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLF-LI------PKNSPPTLE----GQYSKPFKEF  232 (277)
T ss_pred             cccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHh-hh------hcCCCCCCC----cccCHHHHHH
Confidence            678999997544  3678999999999999999999986443211111 00      000111111    1223456677


Q ss_pred             HHHccCCCCCCCCChHHHHHH
Q 021659          271 ARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       271 ~~~cl~~dp~~Rps~~evl~~  291 (309)
                      +.+||+.+|++||++.+++..
T Consensus       233 i~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06642         233 VEACLNKDPRFRPTAKELLKH  253 (277)
T ss_pred             HHHHccCCcccCcCHHHHHHh
Confidence            779999999999999999963

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=3.5e-35  Score=253.45  Aligned_cols=237  Identities=19%  Similarity=0.293  Sum_probs=184.9

Q ss_pred             cccccccCCCceEEEEEEcC-----CcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEee
Q 021659           42 FHRIVYTNSHGAAYKARFQD-----GEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~-----~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      +.+.||.|+||.||+++..+     +..||+|.+.....  ..+.+..|++.++.++|+||+++++++.+ ...+++|||
T Consensus         3 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~   82 (258)
T smart00219        3 LGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEY   82 (258)
T ss_pred             ccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEec
Confidence            34679999999999999743     37899999865443  35678999999999999999999997764 677899999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc----
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN----  189 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~----  189 (309)
                      +++++|.+++.......+++..+..++.|++.||.+|   |+.+++|+||+|+||+++.++.++++|||++.....    
T Consensus        83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~l---h~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~  159 (258)
T smart00219       83 MEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYL---ESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYY  159 (258)
T ss_pred             cCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHH---hcCCeeecccccceEEEccCCeEEEcccCCceeccccccc
Confidence            9999999999763233389999999999999999999   888999999999999999999999999999864432    


Q ss_pred             ----cCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHH
Q 021659          190 ----YATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSK  262 (309)
Q Consensus       190 ----~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  262 (309)
                          ..++..|++||..  ...+.++|+||||+++++|++ |..||..... ......... ...     ......    
T Consensus       160 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~-~~~~~~~~~-~~~-----~~~~~~----  228 (258)
T smart00219      160 KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN-EEVLEYLKK-GYR-----LPKPEN----  228 (258)
T ss_pred             ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHhc-CCC-----CCCCCc----
Confidence                2245789999965  334789999999999999998 7888865322 111111111 110     111111    


Q ss_pred             HHHHHHHHHHHccCCCCCCCCChHHHHHHH
Q 021659          263 ELKKLLAVARLCIKTKDKPTISIPQISRYL  292 (309)
Q Consensus       263 ~~~~l~~l~~~cl~~dp~~Rps~~evl~~L  292 (309)
                      ....+.+++.+|+..+|++|||+.++++.|
T Consensus       229 ~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      229 CPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             CCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            234566677799999999999999998764

Phosphotransferases. Tyrosine-specific kinase subfamily.

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=1.8e-35  Score=287.82  Aligned_cols=243  Identities=17%  Similarity=0.157  Sum_probs=185.8

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccc----cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL----EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~----~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||+|... .++.||+|++.....    ..+++.+|++++++++||||+++++++.+ ...+++|||++++
T Consensus         8 ~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eGG   87 (932)
T PRK13184          8 RLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGY   87 (932)
T ss_pred             EEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCCC
Confidence            68999999999999974 588999999854321    24578899999999999999999997764 6788999999999


Q ss_pred             CHHHhhcCC---------CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc
Q 021659          118 SLKEHLNDP---------LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR  188 (309)
Q Consensus       118 sL~~~i~~~---------~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~  188 (309)
                      +|.+++...         .....++..+..++.++++||+||   |+.+++||||||+||+++.++.++|+|||++....
T Consensus        88 SL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yL---Hs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~  164 (932)
T PRK13184         88 TLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYV---HSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKK  164 (932)
T ss_pred             CHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHH---HHCCccccCCchheEEEcCCCCEEEEecCcceecc
Confidence            999988531         123456678899999999999999   77899999999999999999999999999986441


Q ss_pred             -------------------------ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHh
Q 021659          189 -------------------------NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQES  241 (309)
Q Consensus       189 -------------------------~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~  241 (309)
                                               ...||+.|+|||...+  .+.++|||||||++++|+||+.||.............
T Consensus       165 ~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~  244 (932)
T PRK13184        165 LEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRDV  244 (932)
T ss_pred             cccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhh
Confidence                                     1247889999997543  4788999999999999999999997643211111100


Q ss_pred             cccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCC-ChHHHHHHHhhhhcc
Q 021659          242 SISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTI-SIPQISRYLQNEVDI  298 (309)
Q Consensus       242 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rp-s~~evl~~L~~~~~~  298 (309)
                              +..+... .........+.+++.+|+..||++|| +++++.+.|+..+..
T Consensus       245 --------i~~P~~~-~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~  293 (932)
T PRK13184        245 --------ILSPIEV-APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQG  293 (932)
T ss_pred             --------ccChhhc-cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence                    0011000 00011124566777799999999997 566788888776554

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=3.9e-35  Score=260.73  Aligned_cols=240  Identities=16%  Similarity=0.199  Sum_probs=182.5

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL  119 (309)
                      +.||+|+||.||++... ++..+++|.+.....  ....+.+|++++++++||||+++++++. +...++|+||+++++|
T Consensus         7 ~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L   86 (308)
T cd06615           7 GELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL   86 (308)
T ss_pred             eeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCCcH
Confidence            68999999999999964 578889998754322  2356889999999999999999999665 4788899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-----ccCCCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-----NYATMP  194 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-----~~~~~~  194 (309)
                      .+++..  ...+++..+..++.++++||.|||+  ..+++|+||+|+||+++.++.++++|||++....     ...++.
T Consensus        87 ~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  162 (308)
T cd06615          87 DQVLKK--AGRIPENILGKISIAVLRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR  162 (308)
T ss_pred             HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHh--hCCEEECCCChHHEEEecCCcEEEccCCCcccccccccccCCCCc
Confidence            999976  4678999999999999999999942  3589999999999999999999999999876432     235678


Q ss_pred             CCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccc-ccccc----------------------
Q 021659          195 HSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSIS-SSIHR----------------------  249 (309)
Q Consensus       195 ~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~-~~~~~----------------------  249 (309)
                      .|.+||...+  .+.++|+||||+++++|++|+.||...... ......... .....                      
T Consensus       163 ~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (308)
T cd06615         163 SYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK-ELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFE  241 (308)
T ss_pred             CccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchh-hHHHhhcCccccccccCCcccccCCCCCccchhhHHH
Confidence            9999997533  467899999999999999999998644311 111100000 00000                      


Q ss_pred             -------cccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          250 -------MIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       250 -------~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                             -..+.++..   .....+.+++.+||..+|++||++.++++.
T Consensus       242 ~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  287 (308)
T cd06615         242 LLDYIVNEPPPKLPSG---AFSDEFQDFVDKCLKKNPKERADLKELTKH  287 (308)
T ss_pred             HHHHHhcCCCccCcCc---ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                   000111100   112346677779999999999999999865

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=4e-35  Score=259.25  Aligned_cols=232  Identities=18%  Similarity=0.252  Sum_probs=183.4

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc-cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL-EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~-~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      +.||.|++|.||++.. .+++.|++|.+..... ..+.+.+|+++++.++|||++.+++++.. ...++|+||+++++|.
T Consensus        25 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  104 (296)
T cd06655          25 EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLT  104 (296)
T ss_pred             EEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcHH
Confidence            5799999999999986 5688999998854332 34678899999999999999999997654 6788999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccCCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYATM  193 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~~~  193 (309)
                      .++..   ..+++.++..++.+++.|+.+|   |+.+++||||+|+||+++.++.++|+|||++....       ...++
T Consensus       105 ~~~~~---~~l~~~~~~~i~~~l~~al~~L---H~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  178 (296)
T cd06655         105 DVVTE---TCMDEAQIAAVCRECLQALEFL---HANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGT  178 (296)
T ss_pred             HHHHh---cCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCCcCCC
Confidence            99864   4689999999999999999999   78899999999999999999999999999876432       23566


Q ss_pred             CCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHH
Q 021659          194 PHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVA  271 (309)
Q Consensus       194 ~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~  271 (309)
                      ..|++||....  .+.++||||||+++|+|++|+.||............... . ...+..+   ..    ....+.+++
T Consensus       179 ~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~-~-~~~~~~~---~~----~~~~~~~li  249 (296)
T cd06655         179 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-G-TPELQNP---EK----LSPIFRDFL  249 (296)
T ss_pred             ccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-C-CcccCCc---cc----CCHHHHHHH
Confidence            78999997543  468899999999999999999999765543332211110 0 0011011   11    123455666


Q ss_pred             HHccCCCCCCCCChHHHHH
Q 021659          272 RLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       272 ~~cl~~dp~~Rps~~evl~  290 (309)
                      .+||..||++||++.+++.
T Consensus       250 ~~~l~~dp~~Rpt~~~il~  268 (296)
T cd06655         250 NRCLEMDVEKRGSAKELLQ  268 (296)
T ss_pred             HHHhhcChhhCCCHHHHhh
Confidence            7999999999999999883

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.8e-36  Score=275.72  Aligned_cols=225  Identities=18%  Similarity=0.261  Sum_probs=181.5

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccC-CCCCcceEeee-EeCCeeEEEEeeCC
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRL-HHRHLLALQGF-STGRKRLLVFDNIE  115 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l-~h~niv~~~~~-~~~~~~~lv~e~~~  115 (309)
                      .+.||+|+||+|+++..+ +++.+|+|++++..    .+.+..+.|-.++... +||.+++++.. .+..+.|+||||+.
T Consensus       373 l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~  452 (694)
T KOG0694|consen  373 LAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVA  452 (694)
T ss_pred             EEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEecC
Confidence            368999999999999974 57899999997543    3456778888888777 59999999995 46689999999999


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc-------c
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-------R  188 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-------~  188 (309)
                      ||++...+.   ...|++..+..++..++.||.||   |++|||+||||.+|||+|.+|.+||+|||+++..       +
T Consensus       453 Ggdm~~~~~---~~~F~e~rarfyaAev~l~L~fL---H~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~Ts  526 (694)
T KOG0694|consen  453 GGDLMHHIH---TDVFSEPRARFYAAEVVLGLQFL---HENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDRTS  526 (694)
T ss_pred             CCcEEEEEe---cccccHHHHHHHHHHHHHHHHHH---HhcCceeeecchhheEEcccCcEEecccccccccCCCCCccc
Confidence            999666555   47899999999999999999999   8999999999999999999999999999999733       4


Q ss_pred             ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          189 NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       189 ~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                      +..||+.|+|||...+  ++.+.|=||||+++|||+.|+.||.++.+-.-.-.....        ++..+ .+-   .++
T Consensus       527 TfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d--------~~~yP-~~l---s~e  594 (694)
T KOG0694|consen  527 TFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVND--------EVRYP-RFL---SKE  594 (694)
T ss_pred             cccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcC--------CCCCC-Ccc---cHH
Confidence            6689999999997544  588999999999999999999999976432211111111        11111 122   344


Q ss_pred             HHHHHHHccCCCCCCCCCh
Q 021659          267 LLAVARLCIKTKDKPTISI  285 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rps~  285 (309)
                      .++++.++|.++|+.|.-+
T Consensus       595 a~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  595 AIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             HHHHHHHHhccCcccccCC
Confidence            5556669999999999976

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=4.1e-35  Score=264.40  Aligned_cols=235  Identities=17%  Similarity=0.237  Sum_probs=192.5

Q ss_pred             ccccccCCCceEEEEEEcC-CcEEEEEEeccccc----cHHHHHHHHHHHccCC-CCCcceEeeeEeC-CeeEEEEeeCC
Q 021659           43 HRIVYTNSHGAAYKARFQD-GEVALVKEIQALNL----EKDAFYREIQLLGRLH-HRHLLALQGFSTG-RKRLLVFDNIE  115 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~-~~~va~K~~~~~~~----~~~~~~~ei~~l~~l~-h~niv~~~~~~~~-~~~~lv~e~~~  115 (309)
                      .+.||.|.||.||+++.+. |+.+|+|.+.....    +.+.+.+|+.+|+++. ||||+.+.+.+.+ ...++|||++.
T Consensus        40 ~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~  119 (382)
T KOG0032|consen   40 GRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCE  119 (382)
T ss_pred             hhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecC
Confidence            3689999999999999755 89999999954333    3468899999999998 9999999997765 67889999999


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC----CceeEeccccccccc---
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN----FTAKLSDVGFFNSVR---  188 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~----~~~kl~dfg~~~~~~---  188 (309)
                      ||.|.+.+...   .+++..+..++.+++.|+.||   |+.|++|+||||+|+|+...    +.+|++|||++....   
T Consensus       120 GGeLfd~i~~~---~~sE~da~~~~~~il~av~~l---H~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~  193 (382)
T KOG0032|consen  120 GGELFDRIVKK---HYSERDAAGIIRQILEAVKYL---HSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGE  193 (382)
T ss_pred             CchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHH---HhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCc
Confidence            99999999874   399999999999999999999   78999999999999999643    479999999997554   


Q ss_pred             ---ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHH
Q 021659          189 ---NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKE  263 (309)
Q Consensus       189 ---~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  263 (309)
                         ...||+.|+|||...  .++..+|+||+|+++|.|++|.+||.+.........-....        ......+....
T Consensus       194 ~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~--------~~f~~~~w~~i  265 (382)
T KOG0032|consen  194 RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGD--------FDFTSEPWDDI  265 (382)
T ss_pred             eEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCC--------CCCCCCCcccc
Confidence               347999999999755  56899999999999999999999998876544433221111        12222333333


Q ss_pred             HHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          264 LKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       264 ~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      .....+++..++..||..|+|+.++++.
T Consensus       266 s~~akd~i~~ll~~dp~~R~ta~~~L~H  293 (382)
T KOG0032|consen  266 SESAKDFIRKLLEFDPRKRLTAAQALQH  293 (382)
T ss_pred             CHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence            4555566669999999999999999975

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=1.1e-35  Score=267.24  Aligned_cols=247  Identities=18%  Similarity=0.240  Sum_probs=188.5

Q ss_pred             ccccccccCCCceEEEEEEc--------CCcEEEEEEecccc--ccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeE
Q 021659           41 GFHRIVYTNSHGAAYKARFQ--------DGEVALVKEIQALN--LEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRL  108 (309)
Q Consensus        41 ~~~~~lg~G~~~~v~~~~~~--------~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~  108 (309)
                      .+.+.||+|+||.||++...        .+..||+|.+....  ...+.+.+|+++++++ +||||+++++++.. ...+
T Consensus        15 ~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~   94 (334)
T cd05100          15 TLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLY   94 (334)
T ss_pred             eecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceE
Confidence            34578999999999999742        12368999876432  2245788999999999 79999999998765 6678


Q ss_pred             EEEeeCCCCCHHHhhcCCC--------------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCC
Q 021659          109 LVFDNIENGSLKEHLNDPL--------------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENF  174 (309)
Q Consensus       109 lv~e~~~~~sL~~~i~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~  174 (309)
                      +++||+++++|.+++....              ...+++..+..++.|++.||.||   |+++++|+||+|+||+++.++
T Consensus        95 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~L---H~~givH~dlkp~Nill~~~~  171 (334)
T cd05100          95 VLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYL---ASQKCIHRDLAARNVLVTEDN  171 (334)
T ss_pred             EEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHH---HHCCeeccccccceEEEcCCC
Confidence            9999999999999986421              23578889999999999999999   788999999999999999999


Q ss_pred             ceeEecccccccccc---------cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhc
Q 021659          175 TAKLSDVGFFNSVRN---------YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESS  242 (309)
Q Consensus       175 ~~kl~dfg~~~~~~~---------~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~  242 (309)
                      .+||+|||++.....         ..++..|++||....  .+.++||||||+++|+|++ |..||.... .........
T Consensus       172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-~~~~~~~~~  250 (334)
T cd05100         172 VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP-VEELFKLLK  250 (334)
T ss_pred             cEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC-HHHHHHHHH
Confidence            999999999864322         122346999996533  4678999999999999998 888887543 222222111


Q ss_pred             ccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccccc
Q 021659          243 ISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCY  301 (309)
Q Consensus       243 ~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~~  301 (309)
                      . ....     ....    .....+.+++.+||+.+|+.||++.|+++.|++.......
T Consensus       251 ~-~~~~-----~~~~----~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~~~  299 (334)
T cd05100         251 E-GHRM-----DKPA----NCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVTST  299 (334)
T ss_pred             c-CCCC-----CCCC----CCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhcCC
Confidence            1 1100     1111    1134566777799999999999999999999988865544

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=9.4e-35  Score=253.12  Aligned_cols=239  Identities=19%  Similarity=0.240  Sum_probs=177.1

Q ss_pred             ccccCCCceEEEEEEcCC---cEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCC
Q 021659           45 IVYTNSHGAAYKARFQDG---EVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGS  118 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~~~---~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~s  118 (309)
                      .||+|+||.||++...++   ..+++|.+....  ...+.+.+|+..++.++||||+++++.+.+ ...++||||+++++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   81 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD   81 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence            589999999999985433   345666654322  234678999999999999999999997765 56789999999999


Q ss_pred             HHHhhcCC--CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc---------
Q 021659          119 LKEHLNDP--LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV---------  187 (309)
Q Consensus       119 L~~~i~~~--~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~---------  187 (309)
                      |.+++...  ....++...+..++.|++.||.||   |+.+++|+||||+||+++.++.++|+|||++...         
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~l---H~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~  158 (268)
T cd05086          82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHM---HKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE  158 (268)
T ss_pred             HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHH---HHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence            99998753  124566777889999999999999   7789999999999999999999999999987531         


Q ss_pred             cccCCCCCCCCCCCCCC---------CCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCC
Q 021659          188 RNYATMPHSSCPEDCST---------QDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGG  257 (309)
Q Consensus       188 ~~~~~~~~~~~PE~~~~---------~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  257 (309)
                      ....++..|.+||....         .++++||||||+++|+|++ |..||........ ..... .+......++.+..
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~  236 (268)
T cd05086         159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREV-LNHVI-KDQQVKLFKPQLEL  236 (268)
T ss_pred             cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHHH-hhcccccCCCccCC
Confidence            12245678999996421         2578999999999999997 5678765433221 11111 11222333444433


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHh
Q 021659          258 SYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQ  293 (309)
Q Consensus       258 ~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~  293 (309)
                      .++    ..+.+++..|| .+|++||++.+|++.|.
T Consensus       237 ~~~----~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         237 PYS----ERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             CCc----HHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            322    23445666899 67999999999998874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=1e-35  Score=259.76  Aligned_cols=237  Identities=19%  Similarity=0.296  Sum_probs=182.8

Q ss_pred             cccccCCCceEEEEEEc------CCcEEEEEEecccccc--HHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeC
Q 021659           44 RIVYTNSHGAAYKARFQ------DGEVALVKEIQALNLE--KDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNI  114 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~------~~~~va~K~~~~~~~~--~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~  114 (309)
                      +.||.|+||.||+|+..      +...+++|.+......  .+.+.+|++++++++|+||+++++++.+ ...++||||+
T Consensus        11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   90 (275)
T cd05046          11 TTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYT   90 (275)
T ss_pred             eeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEec
Confidence            57999999999999953      3467899988543332  4678999999999999999999998865 5678999999


Q ss_pred             CCCCHHHhhcCCC-------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc
Q 021659          115 ENGSLKEHLNDPL-------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV  187 (309)
Q Consensus       115 ~~~sL~~~i~~~~-------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~  187 (309)
                      ++++|.+++....       ...+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++.++++|||++...
T Consensus        91 ~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~L---H~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~  167 (275)
T cd05046          91 DLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHL---SNARFVHRDLAARNCLVSSQREVKVSLLSLSKDV  167 (275)
T ss_pred             CCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHh---hhcCcccCcCccceEEEeCCCcEEEccccccccc
Confidence            9999999997532       12689999999999999999999   7889999999999999999999999999987532


Q ss_pred             c--------ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCC
Q 021659          188 R--------NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLG  256 (309)
Q Consensus       188 ~--------~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  256 (309)
                      .        ...++..|++||...  ..++++||||||++++++++ |..||....... ...... ..... +.   ..
T Consensus       168 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~-~~~~~~-~~~~~-~~---~~  241 (275)
T cd05046         168 YNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE-VLNRLQ-AGKLE-LP---VP  241 (275)
T ss_pred             CcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH-HHHHHH-cCCcC-CC---CC
Confidence            1        123345699999643  34788999999999999998 788886533221 111111 11110 00   01


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHh
Q 021659          257 GSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQ  293 (309)
Q Consensus       257 ~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~  293 (309)
                      ..    ....+.+++.+||..+|++||++.|++..|.
T Consensus       242 ~~----~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         242 EG----CPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             CC----CCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            11    1245666777999999999999999999886

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=1.9e-35  Score=261.74  Aligned_cols=242  Identities=16%  Similarity=0.196  Sum_probs=181.1

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      +.||.|+||.||+|+.. ++..||+|.+....  .....+.+|+.++++++||||+++++++.. ...++|+||+++ +|
T Consensus        12 ~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~~-~l   90 (301)
T cd07873          12 DKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK-DL   90 (301)
T ss_pred             eEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEecccc-CH
Confidence            57999999999999974 57889999885332  234567889999999999999999997754 677899999975 89


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYAT  192 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~~  192 (309)
                      .+++... ...+++..+..++.|++.||.||   |+.+++|+||+|+||+++.++.++|+|||++....       ...+
T Consensus        91 ~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~l---H~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  166 (301)
T cd07873          91 KQYLDDC-GNSINMHNVKLFLFQLLRGLNYC---HRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVV  166 (301)
T ss_pred             HHHHHhc-CCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccccce
Confidence            8888653 35688999999999999999999   78899999999999999999999999999886432       2345


Q ss_pred             CCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHH--HHhc---cccccccccc---------CcC
Q 021659          193 MPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWI--QESS---ISSSIHRMID---------PDL  255 (309)
Q Consensus       193 ~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~--~~~~---~~~~~~~~~~---------~~l  255 (309)
                      +..|++||...+   .+.++||||||+++|+|++|+.||.......+..  ....   .......+..         +..
T Consensus       167 ~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (301)
T cd07873         167 TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKY  246 (301)
T ss_pred             eecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCcc
Confidence            778999996432   4678999999999999999999997654322111  1000   0000000000         100


Q ss_pred             CCCC----CHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          256 GGSY----DSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       256 ~~~~----~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ....    .......+.+++.+||+.||.+|||+.|+++
T Consensus       247 ~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~  285 (301)
T cd07873         247 RADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK  285 (301)
T ss_pred             ccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            0000    0011234556777999999999999999985

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=7.9e-35  Score=256.63  Aligned_cols=234  Identities=19%  Similarity=0.240  Sum_probs=181.5

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc-ccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN-LEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~-~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL~  120 (309)
                      +.||+|++|.||+|+.. ++..+++|.+.... ...+.+.+|++++++++|+|++++++.+. +...++||||+++++|.
T Consensus        18 ~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~   97 (292)
T cd06644          18 GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVD   97 (292)
T ss_pred             heecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcHH
Confidence            57999999999999974 47889999985433 23457889999999999999999999654 57788999999999998


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccCCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYATM  193 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~~~  193 (309)
                      .++... ...+++..+..++.|++.||.+|   |+.+++|+||+|+||+++.++.++|+|||++....       ...++
T Consensus        98 ~~~~~~-~~~l~~~~~~~~~~ql~~~l~~l---H~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  173 (292)
T cd06644          98 AIMLEL-DRGLTEPQIQVICRQMLEALQYL---HSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIGT  173 (292)
T ss_pred             HHHHhh-cCCCCHHHHHHHHHHHHHHHHHH---hcCCeeecCCCcceEEEcCCCCEEEccCccceeccccccccceecCC
Confidence            877542 35689999999999999999999   78899999999999999999999999999875432       22456


Q ss_pred             CCCCCCCCCC-------CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          194 PHSSCPEDCS-------TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       194 ~~~~~PE~~~-------~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                      ..|.+||...       ..+.++|+||||+++|+|++|..||........... .....      .+....  .......
T Consensus       174 ~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-~~~~~------~~~~~~--~~~~~~~  244 (292)
T cd06644         174 PYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK-IAKSE------PPTLSQ--PSKWSME  244 (292)
T ss_pred             ccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHH-HhcCC------CccCCC--CcccCHH
Confidence            7899999642       135689999999999999999999875433222111 11110      011100  1111234


Q ss_pred             HHHHHHHccCCCCCCCCChHHHHH
Q 021659          267 LLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      +.+++.+||..+|+.||++.++++
T Consensus       245 ~~~li~~~l~~~p~~Rp~~~~il~  268 (292)
T cd06644         245 FRDFLKTALDKHPETRPSAAQLLE  268 (292)
T ss_pred             HHHHHHHHhcCCcccCcCHHHHhc
Confidence            566777999999999999999975

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=6.8e-36  Score=270.76  Aligned_cols=240  Identities=15%  Similarity=0.174  Sum_probs=179.8

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC-------CeeEEEEe
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG-------RKRLLVFD  112 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~-------~~~~lv~e  112 (309)
                      +.||+|+||.||++.. ..++.||+|.+.....   ..+.+.+|+.+++.++||||+++++++..       ...++|||
T Consensus        23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e  102 (355)
T cd07874          23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVME  102 (355)
T ss_pred             EEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEhh
Confidence            5899999999999986 4578899999854322   23567889999999999999999996642       24689999


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc----
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----  188 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----  188 (309)
                      |+++ ++.+.+.    ..+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....    
T Consensus       103 ~~~~-~l~~~~~----~~l~~~~~~~~~~qi~~aL~~L---H~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~~  174 (355)
T cd07874         103 LMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM  174 (355)
T ss_pred             hhcc-cHHHHHh----hcCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCccc
Confidence            9976 6777664    3488899999999999999999   78899999999999999999999999999986543    


Q ss_pred             --ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccc--------------------
Q 021659          189 --NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSIS--------------------  244 (309)
Q Consensus       189 --~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~--------------------  244 (309)
                        ...++..|+|||...+  .+.++|||||||++|+|++|+.||.+......+.......                    
T Consensus       175 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (355)
T cd07874         175 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE  254 (355)
T ss_pred             cCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHh
Confidence              2357889999997543  4788999999999999999999998654333221110000                    


Q ss_pred             --ccccccccCcC------C--CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          245 --SSIHRMIDPDL------G--GSYDSKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       245 --~~~~~~~~~~l------~--~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                        .....+..+..      .  ..........+.+++.+||+.||++|||+.|+++.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h  311 (355)
T cd07874         255 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH  311 (355)
T ss_pred             cCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence              00000000000      0  00011113456677779999999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=1.2e-35  Score=290.40  Aligned_cols=237  Identities=19%  Similarity=0.236  Sum_probs=184.3

Q ss_pred             cccccccCCCceEEEEEEc-CCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC---CeeEEEEeeC
Q 021659           42 FHRIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG---RKRLLVFDNI  114 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~---~~~~lv~e~~  114 (309)
                      +.+.||+|+||.||++... .+..+|+|.+.....   ....+..|+.++++|+||||+++++++.+   ...|+||||+
T Consensus        17 Il~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~   96 (1021)
T PTZ00266         17 VIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFC   96 (1021)
T ss_pred             EEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCC
Confidence            3468999999999999974 567889998854322   34568899999999999999999996532   4678999999


Q ss_pred             CCCCHHHhhcCC--CCCCCCHHHHHHHHHHHHHHHhhhhhcC----CCCeeecccCCCceeeCC----------------
Q 021659          115 ENGSLKEHLNDP--LKTPLDWKTRLQIAIGVAAALEYLLLFS----NLPMYYVSISSSSIMLDE----------------  172 (309)
Q Consensus       115 ~~~sL~~~i~~~--~~~~l~~~~~~~i~~~i~~~l~~lh~~h----~~~i~H~dl~p~nill~~----------------  172 (309)
                      ++++|.+++...  ....+++..++.++.||+.||.|||...    ..+|+|+||||+|||++.                
T Consensus        97 ~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~n  176 (1021)
T PTZ00266         97 DAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLN  176 (1021)
T ss_pred             CCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccC
Confidence            999999998642  2357999999999999999999996432    256999999999999954                


Q ss_pred             -CCceeEeccccccccc------ccCCCCCCCCCCCCC----CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHh
Q 021659          173 -NFTAKLSDVGFFNSVR------NYATMPHSSCPEDCS----TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQES  241 (309)
Q Consensus       173 -~~~~kl~dfg~~~~~~------~~~~~~~~~~PE~~~----~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~  241 (309)
                       .+.+||+|||++....      ...+++.|+|||...    ..+.++|||||||++|+|++|+.||.........+...
T Consensus       177 g~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~l  256 (1021)
T PTZ00266        177 GRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISEL  256 (1021)
T ss_pred             CCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHH
Confidence             3458999999986542      336789999999653    24678999999999999999999998665555444333


Q ss_pred             cccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHH
Q 021659          242 SISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQIS  289 (309)
Q Consensus       242 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl  289 (309)
                      ...        +.+.....   ...+.+++.+||..+|++||++.+++
T Consensus       257 k~~--------p~lpi~~~---S~eL~dLI~~~L~~dPeeRPSa~QlL  293 (1021)
T PTZ00266        257 KRG--------PDLPIKGK---SKELNILIKNLLNLSAKERPSALQCL  293 (1021)
T ss_pred             hcC--------CCCCcCCC---CHHHHHHHHHHhcCChhHCcCHHHHh
Confidence            221        11111111   24456677799999999999999998

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=2.1e-36  Score=261.53  Aligned_cols=237  Identities=24%  Similarity=0.343  Sum_probs=184.7

Q ss_pred             cccccccCCCceEEEEEEcC-CcEEEEEEeccccccHH---HHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCC
Q 021659           42 FHRIVYTNSHGAAYKARFQD-GEVALVKEIQALNLEKD---AFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIEN  116 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~-~~~va~K~~~~~~~~~~---~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~  116 (309)
                      +.+.||+|+||+||+++... ++.+|+|.+........   ....|+..+++++||||+++++++. +...+++||++++
T Consensus         3 ~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~   82 (260)
T PF00069_consen    3 LVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPG   82 (260)
T ss_dssp             EEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETT
T ss_pred             EeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccccc
Confidence            34689999999999999754 67899999966554433   2356999999999999999999775 5778899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc-------cc
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-------RN  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-------~~  189 (309)
                      ++|.+++..  ...+++..+..++.+++.||.+|   |+.+++|+||+|+||+++.++.++|+|||.+...       ..
T Consensus        83 ~~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~L---h~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~  157 (260)
T PF00069_consen   83 GSLQDYLQK--NKPLSEEEILKIAYQILEALAYL---HSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNP  157 (260)
T ss_dssp             EBHHHHHHH--HSSBBHHHHHHHHHHHHHHHHHH---HHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSS
T ss_pred             ccccccccc--ccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999983  57789999999999999999999   6779999999999999999999999999998642       23


Q ss_pred             cCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCc--cHHHHHHHhcccccccccccCcCCCCCCHHHH
Q 021659          190 YATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDV--DLIQWIQESSISSSIHRMIDPDLGGSYDSKEL  264 (309)
Q Consensus       190 ~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  264 (309)
                      ..++..|.|||...   ..+.++|+||||+++++|++|..||....  +............    ...+.......   .
T Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~---~  230 (260)
T PF00069_consen  158 FVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRP----LPSSSQQSREK---S  230 (260)
T ss_dssp             SSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTH----HHHHTTSHTTS---H
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccc----ccccccccchh---H
Confidence            45677899999754   45889999999999999999999998652  1111111111000    00000000001   2


Q ss_pred             HHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          265 KKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       265 ~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ..+.+++.+||+.||++|||+.++++
T Consensus       231 ~~l~~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  231 EELRDLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             HHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhc
Confidence            56667777999999999999999875

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=3.5e-35  Score=256.06  Aligned_cols=237  Identities=17%  Similarity=0.239  Sum_probs=183.6

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc-----------cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEE
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL-----------EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLV  110 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~-----------~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv  110 (309)
                      +.||+|++|.||+|.. .+++.+|+|.+.....           ..+.+.+|+.++++++|+|++++++++.. ...++|
T Consensus         7 ~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   86 (272)
T cd06629           7 ELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYLSIF   86 (272)
T ss_pred             ceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCceEEE
Confidence            5799999999999986 4588999998743211           02357889999999999999999998765 667899


Q ss_pred             EeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-
Q 021659          111 FDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-  189 (309)
Q Consensus       111 ~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-  189 (309)
                      +||+++++|.+++..  ...+++..+..++.+++.||.+|   |+.+++||||+|.||+++.++.++++|||++..... 
T Consensus        87 ~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~  161 (272)
T cd06629          87 LEYVPGGSIGSCLRT--YGRFEEQLVRFFTEQVLEGLAYL---HSKGILHRDLKADNLLVDADGICKISDFGISKKSDDI  161 (272)
T ss_pred             EecCCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHH---hhCCeeecCCChhhEEEcCCCeEEEeecccccccccc
Confidence            999999999999976  46789999999999999999999   778999999999999999999999999998864432 


Q ss_pred             --------cCCCCCCCCCCCCC----CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCC
Q 021659          190 --------YATMPHSSCPEDCS----TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGG  257 (309)
Q Consensus       190 --------~~~~~~~~~PE~~~----~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  257 (309)
                              ..++..|.+||...    ..+.++|+||||++++++++|..||.............. ...     .+....
T Consensus       162 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-~~~-----~~~~~~  235 (272)
T cd06629         162 YDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGN-KRS-----APPIPP  235 (272)
T ss_pred             ccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhc-ccc-----CCcCCc
Confidence                    24567899999643    247789999999999999999999975444322221111 110     111111


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          258 SYDSKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       258 ~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      .........+.+++.+||.++|+.|||+.++++.
T Consensus       236 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (272)
T cd06629         236 DVSMNLSPVALDFLNACFTINPDNRPTARELLQH  269 (272)
T ss_pred             cccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence            1111223556667779999999999999998864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.6e-36  Score=261.74  Aligned_cols=250  Identities=18%  Similarity=0.282  Sum_probs=197.1

Q ss_pred             cccccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccC--CCCCcceEeeeEe--C---CeeEEEEeeC
Q 021659           42 FHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRL--HHRHLLALQGFST--G---RKRLLVFDNI  114 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l--~h~niv~~~~~~~--~---~~~~lv~e~~  114 (309)
                      ..+.||+|.||.||+|.|+ |+.||+|+|.  ..+.+.+.+|.++.+..  +|+||+.+++.-.  +   .+.++|++|.
T Consensus       215 L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~--srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYH  291 (513)
T KOG2052|consen  215 LQEIIGKGRFGEVWRGRWR-GEDVAVKIFS--SRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYH  291 (513)
T ss_pred             EEEEecCccccceeecccc-CCceEEEEec--ccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecc
Confidence            3468999999999999996 7789999995  44567899999999865  8999999998432  1   4678999999


Q ss_pred             CCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhc-----CCCCeeecccCCCceeeCCCCceeEecccccccc--
Q 021659          115 ENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLF-----SNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV--  187 (309)
Q Consensus       115 ~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~-----h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~--  187 (309)
                      +.|||.|+++.   .+++....++++.+++.||++||+.     .+.+|+|||||..|||+.+++.+.|+|+|+|...  
T Consensus       292 e~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~  368 (513)
T KOG2052|consen  292 EHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS  368 (513)
T ss_pred             cCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecc
Confidence            99999999985   8899999999999999999999863     4788999999999999999999999999998543  


Q ss_pred             ---------cccCCCCCCCCCCCCCCC-------C-CCCcEeehhhHHHHHHhC----------CCCCCCCccHHHHHHH
Q 021659          188 ---------RNYATMPHSSCPEDCSTQ-------D-CSNIIFQLGVLILELVTG----------QSPEEGDVDLIQWIQE  240 (309)
Q Consensus       188 ---------~~~~~~~~~~~PE~~~~~-------~-~~~Dv~slG~~l~~l~tg----------~~p~~~~~~~~~~~~~  240 (309)
                               +...||..|+|||.....       + ..+||||||+++||++.+          +.||.+-.+...-..+
T Consensus       369 ~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~ee  448 (513)
T KOG2052|consen  369 DTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEE  448 (513)
T ss_pred             cCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHH
Confidence                     245899999999964332       1 349999999999998643          3455433222111222


Q ss_pred             hcccccccccccCcCCCCC-CHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcc
Q 021659          241 SSISSSIHRMIDPDLGGSY-DSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDI  298 (309)
Q Consensus       241 ~~~~~~~~~~~~~~l~~~~-~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~  298 (309)
                      +.. ....+-+.|.++..+ +...++.+.+++..||..+|.-|.|+--+-..|.++.++
T Consensus       449 Mrk-VVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~  506 (513)
T KOG2052|consen  449 MRK-VVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNS  506 (513)
T ss_pred             Hhc-ceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcC
Confidence            211 122333456665555 455789999999999999999999999999999877654

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5e-35  Score=262.63  Aligned_cols=238  Identities=17%  Similarity=0.160  Sum_probs=178.0

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      .+.||+|+||.||+++.. +++.||+|++....    ...+.+..|+.+++.++|+||+.+++++.+ ...|+||||+++
T Consensus         6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g   85 (331)
T cd05597           6 LKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVG   85 (331)
T ss_pred             EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCC
Confidence            368999999999999964 58899999985322    223457889999999999999999997654 678899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------  189 (309)
                      ++|.+++... ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++.....       
T Consensus        86 ~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~  161 (331)
T cd05597          86 GDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSV---HQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSN  161 (331)
T ss_pred             CcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHH---HhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCcccc
Confidence            9999998642 35689999999999999999999   888999999999999999999999999999754321       


Q ss_pred             -cCCCCCCCCCCCCC-------CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCH
Q 021659          190 -YATMPHSSCPEDCS-------TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDS  261 (309)
Q Consensus       190 -~~~~~~~~~PE~~~-------~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  261 (309)
                       ..+++.|+|||...       ..+.++|||||||++|+|++|+.||.......... ..........+  +... ...+
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~-~i~~~~~~~~~--~~~~-~~~~  237 (331)
T cd05597         162 VAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG-KIMNHKEHFQF--PPDV-TDVS  237 (331)
T ss_pred             ceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHH-HHHcCCCcccC--CCcc-CCCC
Confidence             24788999999653       23678999999999999999999997653322211 11111110111  0000 1122


Q ss_pred             HHHHHHHHHHHHccCCCC--CCCCChHHHHHH
Q 021659          262 KELKKLLAVARLCIKTKD--KPTISIPQISRY  291 (309)
Q Consensus       262 ~~~~~l~~l~~~cl~~dp--~~Rps~~evl~~  291 (309)
                      .+.+   +++.+|+..++  ..||++.++++.
T Consensus       238 ~~~~---~li~~ll~~~~~r~~r~~~~~~l~h  266 (331)
T cd05597         238 EEAK---DLIRRLICSPETRLGRNGLQDFKDH  266 (331)
T ss_pred             HHHH---HHHHHHccCcccccCCCCHHHHhcC
Confidence            3344   44447665543  348899988855

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=3.3e-37  Score=285.24  Aligned_cols=241  Identities=19%  Similarity=0.297  Sum_probs=194.8

Q ss_pred             ccccccCCCceEEEEEEc----CCcEEEEEEeccccccH--HHHHHHHHHHccCCCCCcceEeeeEeCCe-eEEEEeeCC
Q 021659           43 HRIVYTNSHGAAYKARFQ----DGEVALVKEIQALNLEK--DAFYREIQLLGRLHHRHLLALQGFSTGRK-RLLVFDNIE  115 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~----~~~~va~K~~~~~~~~~--~~~~~ei~~l~~l~h~niv~~~~~~~~~~-~~lv~e~~~  115 (309)
                      ++.||.|.||.|++|+++    ....||+|.++....++  .+|..|+.++-++.||||+++.|+.+... ..+|+|||+
T Consensus       634 e~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyME  713 (996)
T KOG0196|consen  634 EKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYME  713 (996)
T ss_pred             EEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhhh
Confidence            357999999999999963    23579999998765554  57999999999999999999999998754 458899999


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccccC----
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYA----  191 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~~----  191 (309)
                      +|+|+.++.... +.|++.+...++.+|++|+.||   .+.+++||||..+|||++.+..+|++|||+++.+.+..    
T Consensus       714 NGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYL---sdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~y  789 (996)
T KOG0196|consen  714 NGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYL---SDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAY  789 (996)
T ss_pred             CCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHH---hhcCchhhhhhhhheeeccceEEEeccccceeecccCCCccc
Confidence            999999998754 5599999999999999999999   99999999999999999999999999999998664321    


Q ss_pred             C------CCCCCCCCC--CCCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHH
Q 021659          192 T------MPHSSCPED--CSTQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSK  262 (309)
Q Consensus       192 ~------~~~~~~PE~--~~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  262 (309)
                      .      ...|.|||.  ++.++.++||||+|+++||.++ |..||=+..+.. -+......        -+++  .+.+
T Consensus       790 tt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd-VIkaIe~g--------yRLP--pPmD  858 (996)
T KOG0196|consen  790 TTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD-VIKAIEQG--------YRLP--PPMD  858 (996)
T ss_pred             cccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHH-HHHHHHhc--------cCCC--CCCC
Confidence            1      147899995  5677999999999999999876 999986433211 11111111        1111  2234


Q ss_pred             HHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcc
Q 021659          263 ELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDI  298 (309)
Q Consensus       263 ~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~  298 (309)
                      ....|-+|++.||++|-.+||...+|+.+|++++.-
T Consensus       859 CP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn  894 (996)
T KOG0196|consen  859 CPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN  894 (996)
T ss_pred             CcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence            456777888899999999999999999999887653

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=5.5e-35  Score=252.46  Aligned_cols=235  Identities=20%  Similarity=0.240  Sum_probs=185.3

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEeccc---cccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQAL---NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~---~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      .+.||+|+||.+|.+.. .+++.+++|.+...   ....+.+.+|+.++++++||||+++.+++.. ...++|+||++++
T Consensus         5 ~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~   84 (256)
T cd08218           5 VKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGG   84 (256)
T ss_pred             EEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCC
Confidence            36899999999999996 46789999988543   2234578899999999999999999997754 6788999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------c
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------Y  190 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------~  190 (309)
                      +|.+++.......+++..+..++.+++.|+.+|   |+.+++|+||+|+||+++.++.++++|||++.....       .
T Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---h~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~  161 (256)
T cd08218          85 DLYKKINAQRGVLFPEDQILDWFVQICLALKHV---HDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELARTC  161 (256)
T ss_pred             cHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhhc
Confidence            999998764445688999999999999999999   778999999999999999999999999998864432       2


Q ss_pred             CCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHH
Q 021659          191 ATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL  268 (309)
Q Consensus       191 ~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~  268 (309)
                      .++..|.+||....  .+.++|+||||+++++|++|+.||...... ........ +..     +....    .....+.
T Consensus       162 ~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~-~~~~~~~~-~~~-----~~~~~----~~~~~~~  230 (256)
T cd08218         162 IGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK-NLVLKIIR-GSY-----PPVSS----HYSYDLR  230 (256)
T ss_pred             cCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH-HHHHHHhc-CCC-----CCCcc----cCCHHHH
Confidence            46778999997533  467899999999999999999999754322 11111111 111     11111    1234566


Q ss_pred             HHHHHccCCCCCCCCChHHHHHH
Q 021659          269 AVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       269 ~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      +++.+||+.+|++||++.+|++.
T Consensus       231 ~li~~~l~~~p~~Rp~~~~vl~~  253 (256)
T cd08218         231 NLVSQLFKRNPRDRPSVNSILEK  253 (256)
T ss_pred             HHHHHHhhCChhhCcCHHHHhhC
Confidence            77779999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=4.2e-35  Score=256.45  Aligned_cols=231  Identities=17%  Similarity=0.221  Sum_probs=183.6

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      +.||+|++|.||+|... .+..||+|.+....  ...+.+.+|++++++++|+||+++++++.+ ...++||||+++++|
T Consensus        10 ~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   89 (277)
T cd06640          10 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSA   89 (277)
T ss_pred             hhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCCcH
Confidence            57999999999999974 57899999885433  234578899999999999999999997654 678899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------cCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------YAT  192 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------~~~  192 (309)
                      .+++..   ..+++..+..++.+++.||.+|   |+.+++|+||+|+||+++.++.++++|||++.....       ..+
T Consensus        90 ~~~i~~---~~l~~~~~~~~~~~l~~~l~~l---h~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  163 (277)
T cd06640          90 LDLLRA---GPFDEFQIATMLKEILKGLDYL---HSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVG  163 (277)
T ss_pred             HHHHhc---CCCCHHHHHHHHHHHHHHHHHH---HhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccccC
Confidence            999874   5688999999999999999999   788999999999999999999999999998854322       245


Q ss_pred             CCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          193 MPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       193 ~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      +..|.+||....  .+.++|+||||+++|+|++|+.||........... . .         ..............+.++
T Consensus       164 ~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~-~-~---------~~~~~~~~~~~~~~~~~l  232 (277)
T cd06640         164 TPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFL-I-P---------KNNPPTLTGEFSKPFKEF  232 (277)
T ss_pred             cccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhh-h-h---------cCCCCCCchhhhHHHHHH
Confidence            667999997533  47889999999999999999999975432211110 0 0         000111122334566778


Q ss_pred             HHHccCCCCCCCCChHHHHHH
Q 021659          271 ARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       271 ~~~cl~~dp~~Rps~~evl~~  291 (309)
                      +.+||+.+|+.||++.+++..
T Consensus       233 i~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         233 IDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             HHHHcccCcccCcCHHHHHhC
Confidence            889999999999999999754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=9e-36  Score=264.18  Aligned_cols=239  Identities=15%  Similarity=0.211  Sum_probs=183.5

Q ss_pred             cccccCCCceEEEEEEc-CCc----EEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGE----VALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~----~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||+|.+. ++.    .+|+|.+.....  ....+.+|+.+++.++||||+++++++.....++++||+++
T Consensus        13 ~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~v~e~~~~   92 (303)
T cd05110          13 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPH   92 (303)
T ss_pred             cccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCCceeeehhcCC
Confidence            57999999999999863 343    468887754322  23468899999999999999999998877667899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------  189 (309)
                      |+|.+++... ...+++..+..++.|++.||.||   |+.+++|+||||+||+++.++.+||+|||++.....       
T Consensus        93 g~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~L---H~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~  168 (303)
T cd05110          93 GCLLDYVHEH-KDNIGSQLLLNWCVQIAKGMMYL---EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA  168 (303)
T ss_pred             CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHH---hhcCeeccccccceeeecCCCceEEccccccccccCccccccc
Confidence            9999998752 34688999999999999999999   788999999999999999999999999999864431       


Q ss_pred             --cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHH
Q 021659          190 --YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKEL  264 (309)
Q Consensus       190 --~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  264 (309)
                        ..++..|++||...  ..+.++||||||+++|++++ |+.||.+... .............      .....    ..
T Consensus       169 ~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~-~~~~~~~~~~~~~------~~~~~----~~  237 (303)
T cd05110         169 DGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT-REIPDLLEKGERL------PQPPI----CT  237 (303)
T ss_pred             CCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHCCCCC------CCCCC----CC
Confidence              12345799999643  34778999999999999997 8999875421 1111111111100      00111    12


Q ss_pred             HHHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          265 KKLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       265 ~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                      ..+.+++.+||..+|+.||++.++++.|+.+..
T Consensus       238 ~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~  270 (303)
T cd05110         238 IDVYMVMVKCWMIDADSRPKFKELAAEFSRMAR  270 (303)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            356677779999999999999999999987543

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=2.8e-35  Score=256.05  Aligned_cols=231  Identities=19%  Similarity=0.245  Sum_probs=178.5

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc------cHHHHHHHHHHHccCCCCCcceEeeeEeC---CeeEEEEee
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL------EKDAFYREIQLLGRLHHRHLLALQGFSTG---RKRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~------~~~~~~~ei~~l~~l~h~niv~~~~~~~~---~~~~lv~e~  113 (309)
                      +.||+|++|.||++.. ..+..|++|.+.....      ..+.+.+|++++++++||||+++++++..   ...++++||
T Consensus         8 ~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~   87 (266)
T cd06651           8 KLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEY   87 (266)
T ss_pred             ceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEeC
Confidence            6899999999999986 4588999998743221      12467889999999999999999997643   456799999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc----
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN----  189 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~----  189 (309)
                      +++++|.+++..  ...+++..+..++.|++.||.+|   |+.+++|+||+|+||+++.++.++|+|||++.....    
T Consensus        88 ~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~L---H~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~  162 (266)
T cd06651          88 MPGGSVKDQLKA--YGALTESVTRKYTRQILEGMSYL---HSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMS  162 (266)
T ss_pred             CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHEEECCCCCEEEccCCCcccccccccc
Confidence            999999999976  45689999999999999999999   788999999999999999999999999998764321    


Q ss_pred             ------cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCH
Q 021659          190 ------YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDS  261 (309)
Q Consensus       190 ------~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  261 (309)
                            ..++..|.|||....  .+.++||||||+++++|++|+.||.......... ......     ..+.++    .
T Consensus       163 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~-~~~~~~-----~~~~~~----~  232 (266)
T cd06651         163 GTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIF-KIATQP-----TNPQLP----S  232 (266)
T ss_pred             CCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHH-HHhcCC-----CCCCCc----h
Confidence                  235678999997543  4678999999999999999999997653322221 111111     112221    1


Q ss_pred             HHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          262 KELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       262 ~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .....+..++ +||..+|++||++.|+++
T Consensus       233 ~~~~~~~~li-~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         233 HISEHARDFL-GCIFVEARHRPSAEELLR  260 (266)
T ss_pred             hcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence            1123334444 688899999999999975

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.4e-35  Score=257.29  Aligned_cols=235  Identities=19%  Similarity=0.235  Sum_probs=182.8

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc-ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN-LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~-~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      +.||+|++|.||++... ++..+++|.+.... ...+.+..|++++++++|+|++++++.+.. ...++||||+++++|.
T Consensus        11 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   90 (280)
T cd06611          11 GELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALD   90 (280)
T ss_pred             HHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcHH
Confidence            57999999999999974 57899999885433 233568899999999999999999997654 6778999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------cCCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------YATM  193 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------~~~~  193 (309)
                      +++... ...+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++.++|+|||++.....       ..++
T Consensus        91 ~~~~~~-~~~l~~~~~~~~~~ql~~~l~~l---h~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~  166 (280)
T cd06611          91 SIMLEL-ERGLTEPQIRYVCRQMLEALNFL---HSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGT  166 (280)
T ss_pred             HHHHHh-cCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCChhhEEECCCCCEEEccCccchhhcccccccceeecc
Confidence            998652 35699999999999999999999   788999999999999999999999999998754322       2467


Q ss_pred             CCCCCCCCCC-------CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          194 PHSSCPEDCS-------TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       194 ~~~~~PE~~~-------~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                      ..|.+||...       ..+.++|+||||+++|+|++|+.||.......... .... ...     +.+..  .......
T Consensus       167 ~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~-~~~-----~~~~~--~~~~~~~  237 (280)
T cd06611         167 PYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLL-KILK-SEP-----PTLDQ--PSKWSSS  237 (280)
T ss_pred             hhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHH-HHhc-CCC-----CCcCC--cccCCHH
Confidence            7899999642       23568999999999999999999997653322211 1111 110     11110  0111234


Q ss_pred             HHHHHHHccCCCCCCCCChHHHHHH
Q 021659          267 LLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      +.+++.+||+.+|++||++.++++.
T Consensus       238 ~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         238 FNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             HHHHHHHHhccChhhCcCHHHHhcC
Confidence            5566779999999999999999854

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=5.3e-35  Score=260.57  Aligned_cols=182  Identities=23%  Similarity=0.236  Sum_probs=149.4

Q ss_pred             cccccCCCceEEEEEEc---CCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEe---CCeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ---DGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFST---GRKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~---~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~---~~~~~lv~e~~~~~  117 (309)
                      .+||+|+||.||+|+..   ++..||+|.+.... ....+.+|++++++++||||+++++++.   +...++|+||+.+ 
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-   84 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH-   84 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCCC-CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC-
Confidence            47999999999999964   35789999886433 2346789999999999999999999763   2567899999876 


Q ss_pred             CHHHhhcC-------CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceee----CCCCceeEeccccccc
Q 021659          118 SLKEHLND-------PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIML----DENFTAKLSDVGFFNS  186 (309)
Q Consensus       118 sL~~~i~~-------~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill----~~~~~~kl~dfg~~~~  186 (309)
                      +|.+++..       .....+++..+..++.|++.||.||   |+.+++||||||+||++    +.++.+||+|||++..
T Consensus        85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~l---H~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~  161 (317)
T cd07867          85 DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYL---HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL  161 (317)
T ss_pred             cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHH---HhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceec
Confidence            78777642       1134688999999999999999999   78899999999999999    4567899999999865


Q ss_pred             ccc----------cCCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCC
Q 021659          187 VRN----------YATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEG  230 (309)
Q Consensus       187 ~~~----------~~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~  230 (309)
                      ...          ..++..|+|||...+   .+.++||||||+++|+|+||+.||..
T Consensus       162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~  218 (317)
T cd07867         162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC  218 (317)
T ss_pred             cCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence            432          245778999996533   47889999999999999999999964

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=3.3e-35  Score=258.91  Aligned_cols=230  Identities=20%  Similarity=0.276  Sum_probs=182.3

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      .+.||+|++|.||++... +++.+|+|.+....    ...+.+.+|++++++++||||+++++++.+ ...++||||+++
T Consensus         6 ~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~   85 (290)
T cd05580           6 IKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPG   85 (290)
T ss_pred             EEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCC
Confidence            368999999999999974 58899999985432    223568899999999999999999997655 678899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc----cCC
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN----YAT  192 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~----~~~  192 (309)
                      ++|.+++..  ...+++..+..++.|++.||.+|   |+.+++|+||+|+||+++.++.+||+|||++.....    ..+
T Consensus        86 ~~L~~~~~~--~~~l~~~~~~~~~~qil~~l~~l---H~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~  160 (290)
T cd05580          86 GELFSHLRK--SGRFPEPVARFYAAQVVLALEYL---HSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLCG  160 (290)
T ss_pred             CCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCCCC
Confidence            999999976  46789999999999999999999   778999999999999999999999999999875432    346


Q ss_pred             CCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          193 MPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       193 ~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      ++.|.+||....  .+.++|+||||+++++|++|+.||.............  .+.      ..++...    ...+.++
T Consensus       161 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~--~~~------~~~~~~~----~~~l~~l  228 (290)
T cd05580         161 TPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKIL--EGK------VRFPSFF----SPDAKDL  228 (290)
T ss_pred             CccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh--cCC------ccCCccC----CHHHHHH
Confidence            778999996533  4678999999999999999999997654221111111  110      1111111    2345566


Q ss_pred             HHHccCCCCCCCC-----ChHHHH
Q 021659          271 ARLCIKTKDKPTI-----SIPQIS  289 (309)
Q Consensus       271 ~~~cl~~dp~~Rp-----s~~evl  289 (309)
                      +.+||..||.+|+     ++.|++
T Consensus       229 i~~~l~~~p~~R~~~~~~~~~~l~  252 (290)
T cd05580         229 IRNLLQVDLTKRLGNLKNGVNDIK  252 (290)
T ss_pred             HHHHccCCHHHccCcccCCHHHHH
Confidence            6699999999999     667766

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.6e-35  Score=255.67  Aligned_cols=231  Identities=23%  Similarity=0.270  Sum_probs=183.5

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL  119 (309)
                      +.||.|++|.||+|+.. ++..+++|.+....  .....+.+|+++++.++|+|++++.+++. +...++|+||+++++|
T Consensus         7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   86 (274)
T cd06609           7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSC   86 (274)
T ss_pred             hhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCcH
Confidence            57999999999999974 58899999985433  22356889999999999999999999664 4778899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------cCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------YAT  192 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------~~~  192 (309)
                      .+++..   ..+++..+..++.|++.|+.+|   |+.+++|+||+|+||+++.++.++++|||++.....       ..+
T Consensus        87 ~~~~~~---~~~~~~~~~~~~~ql~~~l~~l---h~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~  160 (274)
T cd06609          87 LDLLKP---GKLDETYIAFILREVLLGLEYL---HEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVG  160 (274)
T ss_pred             HHHHhh---cCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEECCCCCEEEcccccceeecccccccccccC
Confidence            999975   3789999999999999999999   788999999999999999999999999999865432       345


Q ss_pred             CCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          193 MPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       193 ~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      +..|.+||...+  .++++||||||+++|+|++|+.||...... ........ .     ..+.+....   ....+.++
T Consensus       161 ~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~-~~~~~~~~-~-----~~~~~~~~~---~~~~~~~~  230 (274)
T cd06609         161 TPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM-RVLFLIPK-N-----NPPSLEGNK---FSKPFKDF  230 (274)
T ss_pred             CccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH-HHHHHhhh-c-----CCCCCcccc---cCHHHHHH
Confidence            677999997543  478999999999999999999999754322 11111110 1     111111110   23356667


Q ss_pred             HHHccCCCCCCCCChHHHHH
Q 021659          271 ARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       271 ~~~cl~~dp~~Rps~~evl~  290 (309)
                      +.+||..+|++|||+.+++.
T Consensus       231 l~~~l~~~p~~Rpt~~~il~  250 (274)
T cd06609         231 VSLCLNKDPKERPSAKELLK  250 (274)
T ss_pred             HHHHhhCChhhCcCHHHHhh
Confidence            77999999999999999975

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.6e-35  Score=261.64  Aligned_cols=234  Identities=19%  Similarity=0.231  Sum_probs=184.4

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccc----cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL----EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~----~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|++|.||++... +++.+|+|.+.....    ..+.+..|+++++.++|+||+++++.+.. ...++||||+.++
T Consensus         7 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~   86 (316)
T cd05574           7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGG   86 (316)
T ss_pred             eeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCCC
Confidence            57999999999999975 488999999865432    23468899999999999999999997654 6788999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---------
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---------  188 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---------  188 (309)
                      +|.+++.......+++..+..++.|++.||.||   |+.+++|+||||+||+++.++.++|+|||++....         
T Consensus        87 ~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~  163 (316)
T cd05574          87 ELFRLLQRQPGKCLSEEVARFYAAEVLLALEYL---HLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKA  163 (316)
T ss_pred             CHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHH---HHCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccccccc
Confidence            999998764457799999999999999999999   78899999999999999999999999999875321         


Q ss_pred             ---------------------------ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHH
Q 021659          189 ---------------------------NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQ  239 (309)
Q Consensus       189 ---------------------------~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~  239 (309)
                                                 ...++..|.+||...+  .+.++||||||+++|+|++|+.||...........
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~  243 (316)
T cd05574         164 LRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSN  243 (316)
T ss_pred             cccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHH
Confidence                                       1245677999996433  47789999999999999999999976543322222


Q ss_pred             HhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCC----hHHHHH
Q 021659          240 ESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTIS----IPQISR  290 (309)
Q Consensus       240 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps----~~evl~  290 (309)
                      ......        ....  .......+.+++.+||+.||++|||    +.+++.
T Consensus       244 ~~~~~~--------~~~~--~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~  288 (316)
T cd05574         244 ILKKEV--------TFPG--SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ  288 (316)
T ss_pred             HhcCCc--------cCCC--ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence            111110        0110  1112355667777999999999999    777775

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-36  Score=271.72  Aligned_cols=232  Identities=21%  Similarity=0.256  Sum_probs=188.2

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc-cc---HHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN-LE---KDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~-~~---~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||.|+||.||-+++ .+.++||+|+...+. ..   .+++..|+..|++|+|||+|.+-|++.. ...|+|||||-| 
T Consensus        32 rEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYClG-  110 (948)
T KOG0577|consen   32 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCLG-  110 (948)
T ss_pred             HHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHhc-
Confidence            3699999999999996 567899999884322 22   2468899999999999999999998865 556799999966 


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc---cccCCCC
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV---RNYATMP  194 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~---~~~~~~~  194 (309)
                      |-.|++.- ...++-+.++..|+.+.+.||+||   |+.+.||||||..|||++.+|.||++|||.+...   +.++|||
T Consensus       111 SAsDlleV-hkKplqEvEIAAi~~gaL~gLaYL---HS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvGTP  186 (948)
T KOG0577|consen  111 SASDLLEV-HKKPLQEVEIAAITHGALQGLAYL---HSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVGTP  186 (948)
T ss_pred             cHHHHHHH-HhccchHHHHHHHHHHHHHHHHHH---HHhhHHhhhccccceEecCCCeeeeccccchhhcCchhcccCCc
Confidence            77777643 257888999999999999999999   7789999999999999999999999999987644   5679999


Q ss_pred             CCCCCCCCC-----CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHH
Q 021659          195 HSSCPEDCS-----TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLA  269 (309)
Q Consensus       195 ~~~~PE~~~-----~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~  269 (309)
                      .|+|||...     .++-++||||||++.+||..+++|.-.......+.-....       -.|.+....+++++..+++
T Consensus       187 ywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQN-------esPtLqs~eWS~~F~~Fvd  259 (948)
T KOG0577|consen  187 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-------ESPTLQSNEWSDYFRNFVD  259 (948)
T ss_pred             cccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhc-------CCCCCCCchhHHHHHHHHH
Confidence            999999643     3467899999999999999999997765554444332221       1255555555666666655


Q ss_pred             HHHHccCCCCCCCCChHHHHH
Q 021659          270 VARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       270 l~~~cl~~dp~~Rps~~evl~  290 (309)
                         .||++-|.+|||..+++.
T Consensus       260 ---~CLqKipqeRptse~ll~  277 (948)
T KOG0577|consen  260 ---SCLQKIPQERPTSEELLK  277 (948)
T ss_pred             ---HHHhhCcccCCcHHHHhh
Confidence               999999999999999874

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=2.6e-35  Score=260.57  Aligned_cols=232  Identities=18%  Similarity=0.263  Sum_probs=182.7

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc-ccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN-LEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~-~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL~  120 (309)
                      +.||+|++|.||++.. .+++.||+|.+.... ...+.+.+|+.+++.++|+|++++++++. +...++||||+++++|.
T Consensus        25 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~  104 (297)
T cd06656          25 EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT  104 (297)
T ss_pred             eeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCHH
Confidence            6799999999999996 568899999985433 33466889999999999999999999765 46788999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccCCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYATM  193 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~~~  193 (309)
                      +++..   ..+++..+..++.+++.||.+|   |+.+++|+||+|+||+++.++.++++|||++....       ...++
T Consensus       105 ~~~~~---~~~~~~~~~~~~~~l~~~L~~L---H~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~  178 (297)
T cd06656         105 DVVTE---TCMDEGQIAAVCRECLQALDFL---HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGT  178 (297)
T ss_pred             HHHHh---CCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCcccCC
Confidence            99864   5688999999999999999999   77899999999999999999999999999876432       23566


Q ss_pred             CCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHH
Q 021659          194 PHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVA  271 (309)
Q Consensus       194 ~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~  271 (309)
                      +.|.+||....  .+.++|+||||+++|++++|..||........... ... ..     .+.+.  ........+.+++
T Consensus       179 ~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~-~~~-~~-----~~~~~--~~~~~~~~~~~li  249 (297)
T cd06656         179 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-IAT-NG-----TPELQ--NPERLSAVFRDFL  249 (297)
T ss_pred             ccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee-ecc-CC-----CCCCC--CccccCHHHHHHH
Confidence            78999996543  46889999999999999999999975433211110 000 00     01110  1111223455677


Q ss_pred             HHccCCCCCCCCChHHHHH
Q 021659          272 RLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       272 ~~cl~~dp~~Rps~~evl~  290 (309)
                      .+||+.+|+.||++.+++.
T Consensus       250 ~~~l~~~p~~Rps~~~il~  268 (297)
T cd06656         250 NRCLEMDVDRRGSAKELLQ  268 (297)
T ss_pred             HHHccCChhhCcCHHHHhc
Confidence            7999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=6.3e-35  Score=252.01  Aligned_cols=232  Identities=20%  Similarity=0.274  Sum_probs=183.4

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccc------cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL------EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIE  115 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~------~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~  115 (309)
                      +.||+|++|.||+|... ++..|++|.+.....      ..+.+.+|+++++.++|+||+++++++.+ ...++++||++
T Consensus         6 ~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (258)
T cd06632           6 ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVP   85 (258)
T ss_pred             ceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEecC
Confidence            57999999999999975 788999998854321      23568899999999999999999998765 67789999999


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------c
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------N  189 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------~  189 (309)
                      +++|.+++..  ...+++..+..++.+++.||.+|   |+.+++|+||+|+||+++.++.+||+|||++....      .
T Consensus        86 ~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~  160 (258)
T cd06632          86 GGSLAKLLKK--YGSFPEPVIRLYTRQILLGLEYL---HDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKS  160 (258)
T ss_pred             CCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCEEEccCccceeccccccccc
Confidence            9999999976  45688999999999999999999   77899999999999999999999999999876433      2


Q ss_pred             cCCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          190 YATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                      ..++..|++||....   .+.++|+||||+++++|++|+.||........... .......     +.....    ....
T Consensus       161 ~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~-~~~~~~~-----~~~~~~----~~~~  230 (258)
T cd06632         161 FKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFK-IGRSKEL-----PPIPDH----LSDE  230 (258)
T ss_pred             cCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHH-HHhcccC-----CCcCCC----cCHH
Confidence            346678999996432   57889999999999999999999976543222211 1110111     111111    1245


Q ss_pred             HHHHHHHccCCCCCCCCChHHHHH
Q 021659          267 LLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      +.+++.+||..+|++||++.+++.
T Consensus       231 ~~~li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         231 AKDFILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             HHHHHHHHhhcCcccCcCHHHHhc
Confidence            556777999999999999999875

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=3.8e-35  Score=259.27  Aligned_cols=244  Identities=18%  Similarity=0.169  Sum_probs=184.5

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEecccccc------HHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeC
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLE------KDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNI  114 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~------~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~  114 (309)
                      .+.||+|++|.||+|... +++.|++|.+......      ...+..|++++++++|+||+++++++.+ ...++||||+
T Consensus         5 ~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   84 (298)
T cd07841           5 GKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM   84 (298)
T ss_pred             eeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEccc
Confidence            357999999999999974 5889999999543322      3456789999999999999999997765 6788999999


Q ss_pred             CCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-----
Q 021659          115 ENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-----  189 (309)
Q Consensus       115 ~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-----  189 (309)
                       +++|.+++.... ..+++..+..++.|+++||.||   |+.+++|+||+|+||+++.++.++|+|||++.....     
T Consensus        85 -~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~l---H~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~  159 (298)
T cd07841          85 -ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYL---HSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKM  159 (298)
T ss_pred             -CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHH---HhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCccc
Confidence             889999997632 3799999999999999999999   788999999999999999999999999999865432     


Q ss_pred             --cCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcc-----cc------cccccccC
Q 021659          190 --YATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSI-----SS------SIHRMIDP  253 (309)
Q Consensus       190 --~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~-----~~------~~~~~~~~  253 (309)
                        ..++..|.+||...   ..+.++|+||||+++++|++|.+||...............     ..      ........
T Consensus       160 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (298)
T cd07841         160 THQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEF  239 (298)
T ss_pred             cccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccc
Confidence              23456799999643   2467899999999999999998888755443222111100     00      00000000


Q ss_pred             cCCCCCC-----HHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          254 DLGGSYD-----SKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       254 ~l~~~~~-----~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      ......+     ......+.+++.+||..||+.|||+.|++..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~  282 (298)
T cd07841         240 KPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH  282 (298)
T ss_pred             cccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            0000111     1224667788889999999999999999964

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=1.1e-34  Score=250.40  Aligned_cols=235  Identities=18%  Similarity=0.219  Sum_probs=184.0

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEecccc---ccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCC
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQALN---LEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENG  117 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~---~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~  117 (309)
                      .+.||+|++|.||++.. .++..+++|.+....   ...+.+.+|++++++++|||++++++.+. +...++|+||++++
T Consensus         5 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~   84 (256)
T cd08220           5 IRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGG   84 (256)
T ss_pred             EEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCCC
Confidence            36799999999999986 457889999985432   23457889999999999999999999654 46788999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC-CceeEecccccccccc------c
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN-FTAKLSDVGFFNSVRN------Y  190 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~-~~~kl~dfg~~~~~~~------~  190 (309)
                      +|.+++.......+++..+..++.+++.|+.+|   |+++++|+||+|+||+++.+ +.++++|||.+.....      .
T Consensus        85 ~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---h~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~  161 (256)
T cd08220          85 TLAEYIQKRCNSLLDEDTILHFFVQILLALHHV---HTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYTV  161 (256)
T ss_pred             CHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcccccc
Confidence            999999765456689999999999999999999   78899999999999999855 4689999999865432      3


Q ss_pred             CCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHH
Q 021659          191 ATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL  268 (309)
Q Consensus       191 ~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~  268 (309)
                      .++..|.+||....  .+.++||||||+++++|++|+.||...... ........ .....     +...    ....+.
T Consensus       162 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-~~~~~~~~-~~~~~-----~~~~----~~~~l~  230 (256)
T cd08220         162 VGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP-ALVLKIMS-GTFAP-----ISDR----YSPDLR  230 (256)
T ss_pred             ccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH-HHHHHHHh-cCCCC-----CCCC----cCHHHH
Confidence            45678999997543  367899999999999999999999764322 22211111 11111     1111    134566


Q ss_pred             HHHHHccCCCCCCCCChHHHHHH
Q 021659          269 AVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       269 ~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      +++.+||..+|++|||+.|++..
T Consensus       231 ~li~~~l~~~p~~Rpt~~~ll~~  253 (256)
T cd08220         231 QLILSMLNLDPSKRPQLSQIMAQ  253 (256)
T ss_pred             HHHHHHccCChhhCCCHHHHhhC
Confidence            77779999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=4.4e-35  Score=268.83  Aligned_cols=178  Identities=19%  Similarity=0.252  Sum_probs=151.4

Q ss_pred             cccccCCCceEEEEEEc---CCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARFQ---DGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~---~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL  119 (309)
                      +.||+|+||.||++...   .+..|++|.+...    ....+|++++++++||||+++++++. ....+++||++. ++|
T Consensus        98 ~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l  172 (392)
T PHA03207         98 SSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK-CDL  172 (392)
T ss_pred             EeecCCCCeEEEEEEEcCCccceeEEEEecccc----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC-CCH
Confidence            68999999999999753   3577899987533    23568999999999999999999665 467889999986 488


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---------cc
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---------NY  190 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---------~~  190 (309)
                      .+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.++|+|||++....         ..
T Consensus       173 ~~~l~~--~~~l~~~~~~~i~~ql~~aL~~L---H~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~  247 (392)
T PHA03207        173 FTYVDR--SGPLPLEQAITIQRRLLEALAYL---HGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGW  247 (392)
T ss_pred             HHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCCHHHEEEcCCCCEEEccCccccccCccccccccccc
Confidence            888854  57799999999999999999999   77899999999999999999999999999986432         23


Q ss_pred             CCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCC
Q 021659          191 ATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGD  231 (309)
Q Consensus       191 ~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~  231 (309)
                      .++..|+|||....  ++.++|||||||++|+|++|+.||.+.
T Consensus       248 ~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~  290 (392)
T PHA03207        248 SGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGK  290 (392)
T ss_pred             ccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence            57889999997543  478899999999999999999998653

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=1.2e-34  Score=260.37  Aligned_cols=238  Identities=16%  Similarity=0.133  Sum_probs=178.3

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      .+.||+|+||.||+++.. .++.+|+|.+....    .....+..|+.++..++|+||+++++++.+ ...++||||+++
T Consensus         6 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~   85 (332)
T cd05623           6 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVG   85 (332)
T ss_pred             EEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCC
Confidence            368999999999999975 47889999985321    123457889999999999999999997755 678899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc--------
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR--------  188 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~--------  188 (309)
                      |+|.+++... ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....        
T Consensus        86 g~L~~~l~~~-~~~l~~~~~~~~~~qi~~al~~l---H~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~  161 (332)
T cd05623          86 GDLLTLLSKF-EDRLPEDMARFYLAEMVIAIDSV---HQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSS  161 (332)
T ss_pred             CcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCcceec
Confidence            9999999652 35689999999999999999999   78899999999999999999999999999875431        


Q ss_pred             ccCCCCCCCCCCCCC-------CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCH
Q 021659          189 NYATMPHSSCPEDCS-------TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDS  261 (309)
Q Consensus       189 ~~~~~~~~~~PE~~~-------~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  261 (309)
                      ...+++.|+|||...       ..+.++|||||||++|+|++|+.||........ ............  -|..... - 
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~-~~~i~~~~~~~~--~p~~~~~-~-  236 (332)
T cd05623         162 VAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET-YGKIMNHKERFQ--FPAQVTD-V-  236 (332)
T ss_pred             ccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHH-HHHHhCCCcccc--CCCcccc-C-
Confidence            235788999999643       347789999999999999999999976543222 221111110000  0111011 1 


Q ss_pred             HHHHHHHHHHHHccCCCCCC--CCChHHHHHH
Q 021659          262 KELKKLLAVARLCIKTKDKP--TISIPQISRY  291 (309)
Q Consensus       262 ~~~~~l~~l~~~cl~~dp~~--Rps~~evl~~  291 (309)
                        ...+.+++.+|+..++++  |+++.|+++.
T Consensus       237 --s~~~~~li~~ll~~~~~r~~r~~~~~~~~h  266 (332)
T cd05623         237 --SEDAKDLIRRLICSREHRLGQNGIEDFKQH  266 (332)
T ss_pred             --CHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence              233444555877654444  7889988755

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=3.5e-35  Score=268.77  Aligned_cols=190  Identities=22%  Similarity=0.234  Sum_probs=165.8

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccCC-C-----CCcceEeeeE-eCCeeEEEEeeCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRLH-H-----RHLLALQGFS-TGRKRLLVFDNIE  115 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~-h-----~niv~~~~~~-~~~~~~lv~e~~~  115 (309)
                      +.||+|+||.|.+|.. ..++.||+|++++...-..+...|+.+|..|+ |     -|+|++++++ ..++.|+|+|.+.
T Consensus       192 e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL~  271 (586)
T KOG0667|consen  192 EVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELLS  271 (586)
T ss_pred             EEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhhh
Confidence            5799999999999996 55899999999887776777788999999996 3     4899999965 4589999999997


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC--CceeEeccccccccccc---
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN--FTAKLSDVGFFNSVRNY---  190 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~--~~~kl~dfg~~~~~~~~---  190 (309)
                      . +|.++++......|+...+..++.||+.||.+|   |+.+|||+||||+|||+...  ..+||+|||.+......   
T Consensus       272 ~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L---~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vyt  347 (586)
T KOG0667|consen  272 T-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFL---HELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVYT  347 (586)
T ss_pred             h-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeeccCChhheeeccCCcCceeEEecccccccCCccee
Confidence            7 999999987778899999999999999999999   89999999999999999654  57999999999876654   


Q ss_pred             -CCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHH
Q 021659          191 -ATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQW  237 (309)
Q Consensus       191 -~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~  237 (309)
                       .-+..|.|||...+  ++.+.|+|||||++.||++|.+.|.++.+..+.
T Consensus       348 YiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl  397 (586)
T KOG0667|consen  348 YIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQL  397 (586)
T ss_pred             eeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHH
Confidence             44568999997655  588999999999999999999999887766554

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=6.7e-35  Score=261.84  Aligned_cols=238  Identities=14%  Similarity=0.138  Sum_probs=179.3

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      .+.||+|+||.||+++.. +++.||+|.+....    ...+.+..|+.++..++|+||+.+++++.+ ...|+||||+++
T Consensus         6 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~g   85 (331)
T cd05624           6 IKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVG   85 (331)
T ss_pred             EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCC
Confidence            368999999999999974 57889999985321    223457889999999999999999997754 778899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc--------
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR--------  188 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~--------  188 (309)
                      |+|.+++... ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....        
T Consensus        86 g~L~~~l~~~-~~~l~~~~~~~~~~qi~~~L~~l---H~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~  161 (331)
T cd05624          86 GDLLTLLSKF-EDRLPEDMARFYIAEMVLAIHSI---HQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSS  161 (331)
T ss_pred             CcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceeec
Confidence            9999999752 35688999999999999999999   78899999999999999999999999999986432        


Q ss_pred             ccCCCCCCCCCCCCC-------CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCH
Q 021659          189 NYATMPHSSCPEDCS-------TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDS  261 (309)
Q Consensus       189 ~~~~~~~~~~PE~~~-------~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  261 (309)
                      ...+++.|+|||...       ..+.++|+||||+++|+|++|+.||.................. .     .++... .
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~-~-----~~p~~~-~  234 (331)
T cd05624         162 VAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEER-F-----QFPSHI-T  234 (331)
T ss_pred             cccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCc-c-----cCCCcc-c
Confidence            135788999999643       2467899999999999999999999765432222111111100 0     011100 1


Q ss_pred             HHHHHHHHHHHHccCCCCCC--CCChHHHHHH
Q 021659          262 KELKKLLAVARLCIKTKDKP--TISIPQISRY  291 (309)
Q Consensus       262 ~~~~~l~~l~~~cl~~dp~~--Rps~~evl~~  291 (309)
                      +....+.+++.+|+..++++  |+++.++++.
T Consensus       235 ~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h  266 (331)
T cd05624         235 DVSEEAKDLIQRLICSRERRLGQNGIEDFKKH  266 (331)
T ss_pred             cCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence            11234555666888876554  5678887743

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=5.7e-35  Score=258.41  Aligned_cols=233  Identities=20%  Similarity=0.271  Sum_probs=182.8

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc-ccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN-LEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~-~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL~  120 (309)
                      ..||+|+||.||++.. .++..|++|.+.... ...+.+.+|+..++.++|||++++++++. +...++++||+++++|.
T Consensus        27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~  106 (297)
T cd06659          27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALT  106 (297)
T ss_pred             hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHH
Confidence            4799999999999986 468899999985432 33457889999999999999999999664 47788999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccCCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYATM  193 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~~~  193 (309)
                      .++..   ..+++..++.++.|++.||.+|   |+.+++|+||+|+||+++.++.++|+|||++....       ...++
T Consensus       107 ~~~~~---~~~~~~~~~~~~~qi~~~L~~L---H~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~  180 (297)
T cd06659         107 DIVSQ---TRLNEEQIATVCESVLQALCYL---HSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGT  180 (297)
T ss_pred             HHHhh---cCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecC
Confidence            98754   5689999999999999999999   78899999999999999999999999999875332       23467


Q ss_pred             CCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHH
Q 021659          194 PHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVA  271 (309)
Q Consensus       194 ~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~  271 (309)
                      ..|.+||....  .+.++||||||+++++|++|+.||........... .... .     .+....  .......+.+++
T Consensus       181 ~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-~~~~-~-----~~~~~~--~~~~~~~l~~~i  251 (297)
T cd06659         181 PYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR-LRDS-P-----PPKLKN--AHKISPVLRDFL  251 (297)
T ss_pred             ccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-Hhcc-C-----CCCccc--cCCCCHHHHHHH
Confidence            78999997543  47889999999999999999999975543322211 1110 0     000100  001123455667


Q ss_pred             HHccCCCCCCCCChHHHHHH
Q 021659          272 RLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       272 ~~cl~~dp~~Rps~~evl~~  291 (309)
                      .+||+.+|+.||++.+++..
T Consensus       252 ~~~l~~~P~~Rps~~~ll~~  271 (297)
T cd06659         252 ERMLTREPQERATAQELLDH  271 (297)
T ss_pred             HHHhcCCcccCcCHHHHhhC
Confidence            79999999999999999873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=3.3e-35  Score=257.76  Aligned_cols=242  Identities=18%  Similarity=0.190  Sum_probs=182.5

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~s  118 (309)
                      +.||.|++|.||+|+.. ++..|++|.+.....   ..+.+.+|++++++++||||+++++++.+ ...++||||+. ++
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~   84 (284)
T cd07860           6 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QD   84 (284)
T ss_pred             eeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-cC
Confidence            57999999999999974 588999998853322   23568899999999999999999997654 67789999996 58


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------cC
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------YA  191 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------~~  191 (309)
                      |..++.......+++..+..++.+++.||.||   |..+++|+||+|+||+++.++.++++|||++.....       ..
T Consensus        85 l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~l---h~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~  161 (284)
T cd07860          85 LKKFMDASPLSGIPLPLIKSYLFQLLQGLAFC---HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV  161 (284)
T ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcccccccc
Confidence            99988765457789999999999999999999   778999999999999999999999999998764322       23


Q ss_pred             CCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccc------------------cccc
Q 021659          192 TMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSS------------------IHRM  250 (309)
Q Consensus       192 ~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~------------------~~~~  250 (309)
                      ++..|.+||...+   .+.++||||||+++|+|+||+.||................+.                  ...+
T Consensus       162 ~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (284)
T cd07860         162 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKW  241 (284)
T ss_pred             ccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccc
Confidence            4678999996533   367899999999999999999999766543322211110000                  0000


Q ss_pred             ccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          251 IDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       251 ~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ....+.. ........+.+++.+||+.||++|||+.+++.
T Consensus       242 ~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         242 ARQDFSK-VVPPLDEDGRDLLSQMLHYDPNKRISAKAALA  280 (284)
T ss_pred             cccCHHH-HcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence            0000000 00011234567777999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3e-36  Score=273.04  Aligned_cols=244  Identities=19%  Similarity=0.261  Sum_probs=200.5

Q ss_pred             cccccCCCceEEEEEEcC-CcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHHH
Q 021659           44 RIVYTNSHGAAYKARFQD-GEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLKE  121 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~-~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~~  121 (309)
                      .+||-|-||.||.|.|+. .-.||+|.++.+..+.++|..|+.+++.++|||+|+++|+|+. ..+|+|+|||..|+|.+
T Consensus       273 hKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLd  352 (1157)
T KOG4278|consen  273 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLD  352 (1157)
T ss_pred             eccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccHHH
Confidence            479999999999999865 5679999999888889999999999999999999999999975 67789999999999999


Q ss_pred             hhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccccCCC--------
Q 021659          122 HLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYATM--------  193 (309)
Q Consensus       122 ~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~~~~--------  193 (309)
                      |+..-....++.-..+.++.||.+|++||   ..+.+|||||-.+|.|+.++..||++|||+++++.....|        
T Consensus       353 YLRecnr~ev~avvLlyMAtQIsSaMeYL---EkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFP  429 (1157)
T KOG4278|consen  353 YLRECNRSEVPAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFP  429 (1157)
T ss_pred             HHHHhchhhcchhHHHHHHHHHHHHHHHH---HHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccCc
Confidence            99876667788788899999999999999   9999999999999999999999999999999877643332        


Q ss_pred             CCCCCCCC--CCCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          194 PHSSCPED--CSTQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       194 ~~~~~PE~--~~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      ..|.|||.  +..++.++|||+||++|||+.| |..||.+-. +.+-..-......   +   .-+..+    ...+-+|
T Consensus       430 IKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid-lSqVY~LLEkgyR---M---~~PeGC----PpkVYeL  498 (1157)
T KOG4278|consen  430 IKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYGLLEKGYR---M---DGPEGC----PPKVYEL  498 (1157)
T ss_pred             ccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc-HHHHHHHHhcccc---c---cCCCCC----CHHHHHH
Confidence            46889995  5666789999999999999987 999998643 2221111111110   0   011122    3355577


Q ss_pred             HHHccCCCCCCCCChHHHHHHHhhhhccccc
Q 021659          271 ARLCIKTKDKPTISIPQISRYLQNEVDIQCY  301 (309)
Q Consensus       271 ~~~cl~~dp~~Rps~~evl~~L~~~~~~~~~  301 (309)
                      ++.||+-+|.+||+..|+.+++++++....+
T Consensus       499 MraCW~WsPsDRPsFaeiHqafEtmf~~sSi  529 (1157)
T KOG4278|consen  499 MRACWNWSPSDRPSFAEIHQAFETMFSSSSI  529 (1157)
T ss_pred             HHHHhcCCcccCccHHHHHHHHHHHhccccc
Confidence            7899999999999999999999998876543

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=1.9e-34  Score=250.02  Aligned_cols=235  Identities=22%  Similarity=0.287  Sum_probs=184.6

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      .+.||+|++|.||++.. .+++.|++|.+.....   ..+.+..|+++++.++|+||+++++++.+ ...++|+||++++
T Consensus         5 ~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~   84 (264)
T cd06626           5 GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGG   84 (264)
T ss_pred             eeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCC
Confidence            36899999999999996 4688999999865443   34678999999999999999999997654 6778999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---------
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---------  188 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---------  188 (309)
                      +|.+++..  ...+++..+..++.+++.|+.+|   |+.+++|+||+|.||+++.++.+||+|||++....         
T Consensus        85 ~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~l---h~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~  159 (264)
T cd06626          85 TLEELLEH--GRILDEHVIRVYTLQLLEGLAYL---HSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEE  159 (264)
T ss_pred             cHHHHHhh--cCCCChHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCccccc
Confidence            99999976  45688999999999999999999   78899999999999999999999999999876442         


Q ss_pred             --ccCCCCCCCCCCCCCC-----CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCH
Q 021659          189 --NYATMPHSSCPEDCST-----QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDS  261 (309)
Q Consensus       189 --~~~~~~~~~~PE~~~~-----~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  261 (309)
                        ...++..|++||....     .+.++||||||++++++++|+.||............... ..     .+.++...  
T Consensus       160 ~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~-----~~~~~~~~--  231 (264)
T cd06626         160 VQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA-GH-----KPPIPDSL--  231 (264)
T ss_pred             ccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc-CC-----CCCCCccc--
Confidence              1245678999996432     467899999999999999999999754332222211111 11     11111111  


Q ss_pred             HHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          262 KELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       262 ~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .....+.+++.+||+.+|++|||+.+++.
T Consensus       232 ~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         232 QLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             ccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            11334556777999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=1.6e-35  Score=259.88  Aligned_cols=243  Identities=21%  Similarity=0.272  Sum_probs=183.9

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      .+.||+|++|.||++... +++.||+|.+.....   ..+.+.+|+++++.++||||+++++++.+ ...++|+||++++
T Consensus         6 ~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   85 (286)
T cd07846           6 LGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHT   85 (286)
T ss_pred             eeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCcc
Confidence            368999999999999975 478999998743222   24568899999999999999999997754 6788999999998


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------cc
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NY  190 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~  190 (309)
                      +|..+...  ...+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++.++++|||++....       ..
T Consensus        86 ~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~L---H~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~  160 (286)
T cd07846          86 VLDDLEKY--PNGLDESRVRKYLFQILRGIEFC---HSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDY  160 (286)
T ss_pred             HHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCcc
Confidence            99887754  45589999999999999999999   77899999999999999999999999999876432       23


Q ss_pred             CCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccc--------------cccccC
Q 021659          191 ATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSI--------------HRMIDP  253 (309)
Q Consensus       191 ~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~--------------~~~~~~  253 (309)
                      .++..|.+||...+   .+.++||||||+++++|++|++||................+..              .....+
T Consensus       161 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (286)
T cd07846         161 VATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLP  240 (286)
T ss_pred             cceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccc
Confidence            45678999996432   3678999999999999999999997654433221111100000              000011


Q ss_pred             cCCCCC-----CHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          254 DLGGSY-----DSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       254 ~l~~~~-----~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ......     .......+.+++.+||+.+|++||++.+++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         241 EVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             cccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence            110000     0112355777888999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=7.8e-35  Score=255.44  Aligned_cols=244  Identities=16%  Similarity=0.173  Sum_probs=185.3

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEecccc---ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQALN---LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~---~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      .+.||+|++|.||+|.. .++..|++|.+....   ...+.+.+|+.++++++||||+++++++.. ...++|+||+ ++
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~   83 (286)
T cd07832           5 LGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PS   83 (286)
T ss_pred             EeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-CC
Confidence            46799999999999997 468899999985433   224578999999999999999999997654 6778999999 89


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc--------
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN--------  189 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~--------  189 (309)
                      +|.+++... ...+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++.++++|||++.....        
T Consensus        84 ~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~  159 (286)
T cd07832          84 DLSEVLRDE-ERPLPEAQVKSYMRMLLKGVAYM---HANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSH  159 (286)
T ss_pred             CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCcccc
Confidence            999998643 36799999999999999999999   778999999999999999999999999998764432        


Q ss_pred             cCCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccc-----cc---------cccc
Q 021659          190 YATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSS-----IH---------RMID  252 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~-----~~---------~~~~  252 (309)
                      ..++..|++||....   .+.++||||||+++++|++|.+||.+......+.......+.     .+         .+..
T Consensus       160 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (286)
T cd07832         160 QVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITF  239 (286)
T ss_pred             ccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccC
Confidence            346678999997532   368899999999999999998888765443322111100000     00         0000


Q ss_pred             CcCC----CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          253 PDLG----GSYDSKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       253 ~~l~----~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      +.-.    .....+....+.+++.+||..+|++|||+.+++..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h  282 (286)
T cd07832         240 PESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH  282 (286)
T ss_pred             CCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            0000    00001123667778889999999999999999863

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=1.2e-34  Score=257.19  Aligned_cols=237  Identities=16%  Similarity=0.170  Sum_probs=181.8

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccc----cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL----EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~----~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||++... .++.|++|.+.....    ..+.+.+|+++++.++||||+++++.+.. ...++||||++++
T Consensus         7 ~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~   86 (305)
T cd05609           7 KLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGG   86 (305)
T ss_pred             eEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCCC
Confidence            68999999999999974 478899998854332    23467899999999999999999996654 6778999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---------
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---------  188 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---------  188 (309)
                      +|.+++..  ...+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++.++++|||+++...         
T Consensus        87 ~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~  161 (305)
T cd05609          87 DCATLLKN--IGALPVDMARMYFAETVLALEYL---HNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYE  161 (305)
T ss_pred             cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccc
Confidence            99999976  46789999999999999999999   77899999999999999999999999999875310         


Q ss_pred             -------------ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccC
Q 021659          189 -------------NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDP  253 (309)
Q Consensus       189 -------------~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (309)
                                   ...++..|.+||...  ..+.++|+||||+++++|++|..||.+.... +....... +.   ...+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~-~~~~~~~~-~~---~~~~  236 (305)
T cd05609         162 GHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE-ELFGQVIS-DD---IEWP  236 (305)
T ss_pred             cccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHh-cc---cCCC
Confidence                         123566799999743  3478899999999999999999999765322 21211111 00   0111


Q ss_pred             cCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhh
Q 021659          254 DLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQN  294 (309)
Q Consensus       254 ~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~  294 (309)
                      .... .   ....+.+++.+||+.+|++||++.++.+.|+.
T Consensus       237 ~~~~-~---~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~  273 (305)
T cd05609         237 EGDE-A---LPADAQDLISRLLRQNPLERLGTGGAFEVKQH  273 (305)
T ss_pred             Cccc-c---CCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence            1111 1   12345566669999999999997666555543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=7.4e-35  Score=253.13  Aligned_cols=231  Identities=19%  Similarity=0.230  Sum_probs=179.5

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc------ccHHHHHHHHHHHccCCCCCcceEeeeEeC---CeeEEEEee
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN------LEKDAFYREIQLLGRLHHRHLLALQGFSTG---RKRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~------~~~~~~~~ei~~l~~l~h~niv~~~~~~~~---~~~~lv~e~  113 (309)
                      +.||+|+||.||++... +++.|++|.+....      ...+.+.+|+.++++++||||+++++++.+   ...++++||
T Consensus         8 ~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~   87 (265)
T cd06652           8 KLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEH   87 (265)
T ss_pred             eEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEEe
Confidence            68999999999999974 58899999874321      113467889999999999999999997653   356799999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-----
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-----  188 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-----  188 (309)
                      +++++|.+++..  ...+++..+..++.+++.||.+|   |+.+++|+||+|+||+++.++.++|+|||++....     
T Consensus        88 ~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~l---H~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~  162 (265)
T cd06652          88 MPGGSIKDQLKS--YGALTENVTRKYTRQILEGVSYL---HSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLS  162 (265)
T ss_pred             cCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHEEecCCCCEEECcCcccccccccccc
Confidence            999999999875  45688899999999999999999   78899999999999999999999999999876432     


Q ss_pred             -----ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCH
Q 021659          189 -----NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDS  261 (309)
Q Consensus       189 -----~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  261 (309)
                           ...++..|++||...  ..+.++||||||+++|+|++|+.||.......... .......     .+..    +.
T Consensus       163 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-~~~~~~~-----~~~~----~~  232 (265)
T cd06652         163 GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIF-KIATQPT-----NPVL----PP  232 (265)
T ss_pred             ccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHH-HHhcCCC-----CCCC----ch
Confidence                 234667899999753  34688999999999999999999997553332221 1111110     1111    12


Q ss_pred             HHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          262 KELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       262 ~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .....+..++.+|+. +|+.||++.|++.
T Consensus       233 ~~~~~~~~~i~~~l~-~p~~Rp~~~~il~  260 (265)
T cd06652         233 HVSDHCRDFLKRIFV-EAKLRPSADELLR  260 (265)
T ss_pred             hhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence            223455566668885 8999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=4.1e-35  Score=258.72  Aligned_cols=233  Identities=21%  Similarity=0.303  Sum_probs=182.1

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc-ccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN-LEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~-~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL~  120 (309)
                      ..||+|+||.||++.. .++..||+|.+.... ...+.+.+|+..+++++|+|++++++.+. ....++||||+++++|.
T Consensus        28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~  107 (292)
T cd06658          28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALT  107 (292)
T ss_pred             hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHH
Confidence            4689999999999986 457899999885433 23456889999999999999999999654 47788999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccCCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYATM  193 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~~~  193 (309)
                      +++..   ..+++..+..++.+++.||.||   |+.+++||||+|+||+++.++.++|+|||++....       ...++
T Consensus       108 ~~~~~---~~l~~~~~~~~~~qi~~~l~~L---H~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~  181 (292)
T cd06658         108 DIVTH---TRMNEEQIATVCLSVLRALSYL---HNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGT  181 (292)
T ss_pred             HHHhc---CCCCHHHHHHHHHHHHHHHHHH---HHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecC
Confidence            98864   5689999999999999999999   77899999999999999999999999999875432       23467


Q ss_pred             CCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHH
Q 021659          194 PHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVA  271 (309)
Q Consensus       194 ~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~  271 (309)
                      ..|+|||....  .+.++|+||||+++++|++|+.||........... ..      ....+.+....  .....+.+++
T Consensus       182 ~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~-~~------~~~~~~~~~~~--~~~~~~~~li  252 (292)
T cd06658         182 PYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRR-IR------DNLPPRVKDSH--KVSSVLRGFL  252 (292)
T ss_pred             ccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HH------hcCCCcccccc--ccCHHHHHHH
Confidence            78999997533  47889999999999999999999976543222111 10      01111111110  1123455666


Q ss_pred             HHccCCCCCCCCChHHHHHH
Q 021659          272 RLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       272 ~~cl~~dp~~Rps~~evl~~  291 (309)
                      .+||..||++|||+.++++.
T Consensus       253 ~~~l~~~P~~Rpt~~~il~~  272 (292)
T cd06658         253 DLMLVREPSQRATAQELLQH  272 (292)
T ss_pred             HHHccCChhHCcCHHHHhhC
Confidence            69999999999999999964

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=5.7e-35  Score=256.88  Aligned_cols=239  Identities=18%  Similarity=0.241  Sum_probs=180.1

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc--ccHHHHHHHHHHHccCC-CCCcceEeeeEe-CCeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN--LEKDAFYREIQLLGRLH-HRHLLALQGFST-GRKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~-h~niv~~~~~~~-~~~~~lv~e~~~~~s  118 (309)
                      +.||+|+||.||++... +++.+|+|.+....  .....+.+|+.++.++. |+||+++++++. +...+++|||+.. +
T Consensus        10 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~-~   88 (288)
T cd06616          10 GEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDI-S   88 (288)
T ss_pred             HHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecccC-C
Confidence            57999999999999974 57899999985432  23456889999999996 999999999665 4677899999865 6


Q ss_pred             HHHhh---cCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------c
Q 021659          119 LKEHL---NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------N  189 (309)
Q Consensus       119 L~~~i---~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------~  189 (309)
                      +.++.   .......+++..+..++.+++.||+|||  +..+++||||+|+||+++.++.++|+|||++....      .
T Consensus        89 l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh--~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~  166 (288)
T cd06616          89 LDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLK--EELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKTR  166 (288)
T ss_pred             HHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh--hcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCcccc
Confidence            55433   2222467999999999999999999995  34689999999999999999999999999986432      2


Q ss_pred             cCCCCCCCCCCCCC-----CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHH
Q 021659          190 YATMPHSSCPEDCS-----TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKEL  264 (309)
Q Consensus       190 ~~~~~~~~~PE~~~-----~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  264 (309)
                      ..++..|.+||...     ..+.++||||||+++++|++|+.||............... ..     .+.+.........
T Consensus       167 ~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~  240 (288)
T cd06616         167 DAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVK-GD-----PPILSNSEEREFS  240 (288)
T ss_pred             ccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcC-CC-----CCcCCCcCCCccC
Confidence            34677899999643     3477899999999999999999999765433222222111 11     1122211111223


Q ss_pred             HHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          265 KKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       265 ~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      ..+.+++.+||+.+|++|||+.+|+..
T Consensus       241 ~~l~~li~~~l~~~p~~Rpt~~~i~~~  267 (288)
T cd06616         241 PSFVNFINLCLIKDESKRPKYKELLEH  267 (288)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            456677779999999999999999853

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=6.4e-35  Score=253.61  Aligned_cols=233  Identities=17%  Similarity=0.256  Sum_probs=182.0

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc-------cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL-------EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNI  114 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~-------~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~  114 (309)
                      +.||+|++|.||++.. .++..+|+|.+.....       ..+.+.+|++++++++|+||+++++++.+ ...++|+||+
T Consensus         6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~~   85 (268)
T cd06630           6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWM   85 (268)
T ss_pred             ceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEecc
Confidence            5799999999999986 5688999998853221       13568899999999999999999997754 6778999999


Q ss_pred             CCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCC-ceeEecccccccccc----
Q 021659          115 ENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENF-TAKLSDVGFFNSVRN----  189 (309)
Q Consensus       115 ~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~-~~kl~dfg~~~~~~~----  189 (309)
                      ++++|.+++..  ...+++..+..++.|++.||.+|   |+++++|+||+|+||+++.++ .++|+|||.+.....    
T Consensus        86 ~~~~L~~~l~~--~~~~~~~~~~~~~~ql~~al~~L---H~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~  160 (268)
T cd06630          86 AGGSVSHLLSK--YGAFKEAVIINYTEQLLRGLSYL---HENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTG  160 (268)
T ss_pred             CCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccccc
Confidence            99999999875  46789999999999999999999   788999999999999998775 599999998764432    


Q ss_pred             -------cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccH--HHHHHHhcccccccccccCcCCCC
Q 021659          190 -------YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDL--IQWIQESSISSSIHRMIDPDLGGS  258 (309)
Q Consensus       190 -------~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~  258 (309)
                             ..++..|.+||...  ..+.++|+||||+++++|++|..||......  .........     ....+    .
T Consensus       161 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~----~  231 (268)
T cd06630         161 AGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIAS-----ATTAP----S  231 (268)
T ss_pred             CCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhc-----cCCCC----C
Confidence                   23566899999753  3468899999999999999999999643321  111111000     00011    1


Q ss_pred             CCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          259 YDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       259 ~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .+......+.+++.+||..+|+.||++.+++.
T Consensus       232 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         232 IPEHLSPGLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             CchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence            12223456667788999999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=2.1e-34  Score=258.27  Aligned_cols=242  Identities=17%  Similarity=0.147  Sum_probs=181.2

Q ss_pred             ccccC--CCceEEEEEE-cCCcEEEEEEecccccc---HHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           45 IVYTN--SHGAAYKARF-QDGEVALVKEIQALNLE---KDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        45 ~lg~G--~~~~v~~~~~-~~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      .||+|  +++.||++.. .+++.||+|.+......   .+.+.+|+.+++.++||||+++++++.. ...++|+||+.++
T Consensus         5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~   84 (328)
T cd08226           5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG   84 (328)
T ss_pred             HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence            46666  8899999997 46899999998543322   3567899999999999999999997754 6778999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---------
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---------  188 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---------  188 (309)
                      +|.+++.......+++..+..++.|++.||+||   |+.+++||||||+||+++.++.++++||+.+....         
T Consensus        85 ~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~l---H~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (328)
T cd08226          85 SANSLLKTYFPEGMSEALIGNILFGALRGLNYL---HQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVV  161 (328)
T ss_pred             CHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccc
Confidence            999998764445689999999999999999999   78899999999999999999999999997542111         


Q ss_pred             -----ccCCCCCCCCCCCCCC----CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccccc-----------
Q 021659          189 -----NYATMPHSSCPEDCST----QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIH-----------  248 (309)
Q Consensus       189 -----~~~~~~~~~~PE~~~~----~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~-----------  248 (309)
                           ...++..|++||....    .+.++|||||||++++|++|+.||...................+           
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (328)
T cd08226         162 YDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEES  241 (328)
T ss_pred             ccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhh
Confidence                 0123456999997533    46889999999999999999999976543322222111100000           


Q ss_pred             ------------------------ccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHH
Q 021659          249 ------------------------RMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQIS  289 (309)
Q Consensus       249 ------------------------~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl  289 (309)
                                              ......+...........+.+++.+||..||+.|||+.|++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l  306 (328)
T cd08226         242 RMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLL  306 (328)
T ss_pred             hhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHh
Confidence                                    00000111111122456678888899999999999999997

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=1.7e-34  Score=252.70  Aligned_cols=232  Identities=16%  Similarity=0.250  Sum_probs=178.5

Q ss_pred             cccCCCceEEEEEE-cCCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           46 VYTNSHGAAYKARF-QDGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        46 lg~G~~~~v~~~~~-~~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      ||+|+||+||++.. .+++.+++|.+....    .....+..|++++++++|||++++++.+.. ...++|+||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            68999999999986 458899999885422    123456789999999999999999986654 678899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------ccCCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------NYATM  193 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------~~~~~  193 (309)
                      .+++.......+++..+..++.++++||.||   |+.+++|+||+|+||+++.++.++++|||++....      ...++
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~l---H~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  157 (277)
T cd05577          81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHL---HQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGT  157 (277)
T ss_pred             HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCC
Confidence            9998764345799999999999999999999   78899999999999999999999999999876443      23456


Q ss_pred             CCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccH--HHHHHHhcccccccccccCcCCCCCCHHHHHHHHH
Q 021659          194 PHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDL--IQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLA  269 (309)
Q Consensus       194 ~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~  269 (309)
                      ..|.+||...+  .+.++|+||||+++++|++|+.||......  ...+......      .........    ...+.+
T Consensus       158 ~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~------~~~~~~~~~----~~~~~~  227 (277)
T cd05577         158 PGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE------MAVEYPDKF----SPEAKD  227 (277)
T ss_pred             CCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc------ccccCCccC----CHHHHH
Confidence            78999997433  467899999999999999999999754321  1111111100      001111111    334556


Q ss_pred             HHHHccCCCCCCCC-----ChHHHHH
Q 021659          270 VARLCIKTKDKPTI-----SIPQISR  290 (309)
Q Consensus       270 l~~~cl~~dp~~Rp-----s~~evl~  290 (309)
                      ++.+||+.||++||     ++.+++.
T Consensus       228 li~~~l~~~p~~R~~~~~~~~~~ll~  253 (277)
T cd05577         228 LCEALLQKDPEKRLGCRGGSADEVRE  253 (277)
T ss_pred             HHHHHccCChhHccCCCcccHHHHHh
Confidence            66699999999999     6666763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.6e-35  Score=253.94  Aligned_cols=231  Identities=21%  Similarity=0.300  Sum_probs=182.6

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccc--cccHHHHHHHHHHHccCC---CCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQAL--NLEKDAFYREIQLLGRLH---HRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~--~~~~~~~~~ei~~l~~l~---h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      +.||+|++|.||+|.. .++..+++|.+...  ....+.+.+|++++++++   |||++++++++.+ ...++||||+++
T Consensus         7 ~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~   86 (277)
T cd06917           7 ELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEG   86 (277)
T ss_pred             hheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCC
Confidence            5799999999999996 56889999988543  223457889999999986   9999999997654 677899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------  189 (309)
                      ++|.+++..   ..+++..+..++.+++.||.+|   |+.+++|+||+|+||+++.++.++++|||++.....       
T Consensus        87 ~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~l---h~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~  160 (277)
T cd06917          87 GSVRTLMKA---GPIAEKYISVIIREVLVALKYI---HKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRST  160 (277)
T ss_pred             CcHHHHHHc---cCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcccccc
Confidence            999999865   4789999999999999999999   788999999999999999999999999998864432       


Q ss_pred             cCCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          190 YATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                      ..++..|.+||....   .+.++|+||||+++|+|++|..||........ ....      .....+.+....   ....
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~-~~~~------~~~~~~~~~~~~---~~~~  230 (277)
T cd06917         161 FVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA-MMLI------PKSKPPRLEDNG---YSKL  230 (277)
T ss_pred             ccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh-hhcc------ccCCCCCCCccc---CCHH
Confidence            246677999996533   36789999999999999999999976532211 1110      011112222111   2345


Q ss_pred             HHHHHHHccCCCCCCCCChHHHHH
Q 021659          267 LLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      +.+++.+||+.||++||++.+++.
T Consensus       231 ~~~~i~~~l~~~p~~R~~~~~il~  254 (277)
T cd06917         231 LREFVAACLDEEPKERLSAEELLK  254 (277)
T ss_pred             HHHHHHHHcCCCcccCcCHHHHhh
Confidence            667777999999999999999985

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=2.4e-34  Score=249.37  Aligned_cols=231  Identities=19%  Similarity=0.271  Sum_probs=181.4

Q ss_pred             cccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           46 VYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        46 lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      ||.|++|.||+++.. .+..+++|.+....    ...+.+.+|++++++++||||+++++++.+ ...++++||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            689999999999974 47899999985432    223578999999999999999999997654 677899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc------cCCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN------YATM  193 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~------~~~~  193 (309)
                      .+++..  ...+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++.++++|||++.....      ..++
T Consensus        81 ~~~l~~--~~~l~~~~~~~~~~~i~~~l~~l---H~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~  155 (262)
T cd05572          81 WTILRD--RGLFDEYTARFYIACVVLAFEYL---HNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGT  155 (262)
T ss_pred             HHHHhh--cCCCCHHHHHHHHHHHHHHHHHH---hhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCC
Confidence            999976  45689999999999999999999   788999999999999999999999999999875433      3457


Q ss_pred             CCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCcc-HHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          194 PHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVD-LIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       194 ~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      ..|.+||...  ..+.++|+||||+++|+|++|..||..... .............     ....+...    ...+.++
T Consensus       156 ~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~----~~~~~~~  226 (262)
T cd05572         156 PEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNG-----KLEFPNYI----DKAAKDL  226 (262)
T ss_pred             cCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCC-----CCCCCccc----CHHHHHH
Confidence            7899999743  347889999999999999999999976542 1121111110000     01111111    3456677


Q ss_pred             HHHccCCCCCCCCC-----hHHHHH
Q 021659          271 ARLCIKTKDKPTIS-----IPQISR  290 (309)
Q Consensus       271 ~~~cl~~dp~~Rps-----~~evl~  290 (309)
                      +.+||..+|++||+     +.|+++
T Consensus       227 i~~~l~~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         227 IKQLLRRNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             HHHHccCChhhCcCCcccCHHHHhc
Confidence            77999999999999     666664

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=1.8e-34  Score=250.38  Aligned_cols=238  Identities=20%  Similarity=0.258  Sum_probs=185.3

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCC
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGS  118 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~s  118 (309)
                      .+.||.|++|.||+|... ++..+++|++....  ...+.+.+|++.++.++|+|++++++.+. +...++++|++++++
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~   85 (267)
T cd06610           6 IEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGS   85 (267)
T ss_pred             eeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCc
Confidence            467999999999999964 57889999885432  23467899999999999999999999654 477889999999999


Q ss_pred             HHHhhcCCCC-CCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc--------
Q 021659          119 LKEHLNDPLK-TPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN--------  189 (309)
Q Consensus       119 L~~~i~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~--------  189 (309)
                      |.+++..... ..+++..+..++.+++.|+.+|   |+.+++|+||+|+||+++.++.++++|||++.....        
T Consensus        86 l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~l---h~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~  162 (267)
T cd06610          86 LLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYL---HSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKV  162 (267)
T ss_pred             HHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccccc
Confidence            9999975322 5689999999999999999999   788999999999999999999999999998754332        


Q ss_pred             ---cCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCC-CHH
Q 021659          190 ---YATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSY-DSK  262 (309)
Q Consensus       190 ---~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~  262 (309)
                         ..++..|.+||...   ..+.++|+||||+++++|++|+.||...............       ..+.+.... ...
T Consensus       163 ~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~  235 (267)
T cd06610         163 RKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN-------DPPSLETGADYKK  235 (267)
T ss_pred             cccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC-------CCCCcCCcccccc
Confidence               13567799999632   3578899999999999999999999765433222211111       011111111 112


Q ss_pred             HHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          263 ELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       263 ~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ....+.+++.+||+.||+.||++.+++.
T Consensus       236 ~~~~~~~li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         236 YSKSFRKMISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             ccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            2355667777999999999999999986

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=2.2e-34  Score=249.48  Aligned_cols=235  Identities=18%  Similarity=0.257  Sum_probs=188.2

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCC
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGS  118 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~s  118 (309)
                      .+.||+|++|.||++... +++.+++|.+....  ...+.+.+|++.+.+++|+|++++++++.. ...++++||+++++
T Consensus         6 ~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~   85 (264)
T cd06623           6 VKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGS   85 (264)
T ss_pred             eeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCc
Confidence            368999999999999975 48899999885443  235678999999999999999999997654 67889999999999


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCC-CCeeecccCCCceeeCCCCceeEecccccccccc-------c
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSN-LPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------Y  190 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~-~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------~  190 (309)
                      |.+++..  ...+++..++.++.+++.|+.+|   |+ .+++|+||+|+||+++.++.++|+|||.+.....       .
T Consensus        86 L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~l---h~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~  160 (264)
T cd06623          86 LADLLKK--VGKIPEPVLAYIARQILKGLDYL---HTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTF  160 (264)
T ss_pred             HHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---hccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcccce
Confidence            9999976  47799999999999999999999   77 9999999999999999999999999998865432       2


Q ss_pred             CCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCc--cHHHHHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          191 ATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDV--DLIQWIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       191 ~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                      .++..|.+||....  .+.++|+||||+++|+|++|+.||....  ...+....... ..     .+.....   .....
T Consensus       161 ~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~---~~~~~  231 (264)
T cd06623         161 VGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICD-GP-----PPSLPAE---EFSPE  231 (264)
T ss_pred             eecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhc-CC-----CCCCCcc---cCCHH
Confidence            45678999997544  3678999999999999999999997654  33232222211 11     1111111   02356


Q ss_pred             HHHHHHHccCCCCCCCCChHHHHHH
Q 021659          267 LLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      +.+++.+||.++|++||++.++++.
T Consensus       232 l~~li~~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         232 FRDFISACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             HHHHHHHHccCChhhCCCHHHHHhC
Confidence            6677779999999999999999863

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=1.6e-34  Score=251.84  Aligned_cols=239  Identities=19%  Similarity=0.242  Sum_probs=181.2

Q ss_pred             ccccccCCCceEEEEEEc----CCcEEEEEEecccc---ccHHHHHHHHHHHccCCCCCcceEeeeEeCC-------eeE
Q 021659           43 HRIVYTNSHGAAYKARFQ----DGEVALVKEIQALN---LEKDAFYREIQLLGRLHHRHLLALQGFSTGR-------KRL  108 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~----~~~~va~K~~~~~~---~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~-------~~~  108 (309)
                      .+.||+|+||.||+|...    .+..+|+|.+....   ...+.+.+|++++++++||||+++++++...       ..+
T Consensus         4 ~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   83 (273)
T cd05074           4 GRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPM   83 (273)
T ss_pred             hhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceE
Confidence            467999999999999853    36789999885432   2245688999999999999999999976421       236


Q ss_pred             EEEeeCCCCCHHHhhcCC----CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccc
Q 021659          109 LVFDNIENGSLKEHLNDP----LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFF  184 (309)
Q Consensus       109 lv~e~~~~~sL~~~i~~~----~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~  184 (309)
                      ++++|+.+++|.+++...    ....+++..+..++.+++.||+||   |+++++|+||+|+||+++.++.+|++|||++
T Consensus        84 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~l---H~~~i~H~dikp~nili~~~~~~kl~dfg~~  160 (273)
T cd05074          84 VILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYL---SSKNFIHRDLAARNCMLNENMTVCVADFGLS  160 (273)
T ss_pred             EEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCEeecccchhhEEEcCCCCEEECccccc
Confidence            888999999999886421    123578899999999999999999   7789999999999999999999999999998


Q ss_pred             ccccc---------cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccc
Q 021659          185 NSVRN---------YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMID  252 (309)
Q Consensus       185 ~~~~~---------~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  252 (309)
                      .....         ..++..|.+||...  ..+.++||||||+++|+|++ |+.||....... ..........      
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~-~~~~~~~~~~------  233 (273)
T cd05074         161 KKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSE-IYNYLIKGNR------  233 (273)
T ss_pred             ccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHH-HHHHHHcCCc------
Confidence            64421         12235688898643  34778999999999999999 888887543321 1111111110      


Q ss_pred             CcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhh
Q 021659          253 PDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNE  295 (309)
Q Consensus       253 ~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~  295 (309)
                      ...    .......+.+++.+||..+|++|||+.+++..|+++
T Consensus       234 ~~~----~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         234 LKQ----PPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             CCC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            000    011235677788899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=3.1e-35  Score=257.93  Aligned_cols=243  Identities=16%  Similarity=0.173  Sum_probs=179.1

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      .+.||+|++|.||+|... +|..+++|.+.....   ....+.+|++++++++||||+++++++.+ ...++++||+++ 
T Consensus         5 ~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-   83 (284)
T cd07839           5 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCDQ-   83 (284)
T ss_pred             EEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCCC-
Confidence            367999999999999974 688999999854322   23467889999999999999999996654 677899999975 


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------cc
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NY  190 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~  190 (309)
                      +|.+++... ...+++..+..++.|+++||.||   |+.+++|+||+|+||+++.++.++|+|||++....       ..
T Consensus        84 ~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~L---H~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  159 (284)
T cd07839          84 DLKKYFDSC-NGDIDPEIVKSFMFQLLKGLAFC---HSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAE  159 (284)
T ss_pred             CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHH---HHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCC
Confidence            788776542 35689999999999999999999   77899999999999999999999999999886443       23


Q ss_pred             CCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhc---ccc------ccccccc----Cc
Q 021659          191 ATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESS---ISS------SIHRMID----PD  254 (309)
Q Consensus       191 ~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~---~~~------~~~~~~~----~~  254 (309)
                      .++..|++||...+   .+.++||||||+++++|++|..|+..............   ...      ......+    +.
T Consensus       160 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
T cd07839         160 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPM  239 (284)
T ss_pred             ccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCC
Confidence            45678999996433   36789999999999999999988644333222211100   000      0000000    00


Q ss_pred             CCCC-----CCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          255 LGGS-----YDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       255 l~~~-----~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ....     ........+.+++.+||+.||.+|||+.+++.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         240 YPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             CCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence            0000     00112345566777999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=1.4e-34  Score=251.12  Aligned_cols=234  Identities=18%  Similarity=0.254  Sum_probs=184.6

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL  119 (309)
                      +.||.|++|.||++... +++.+++|.+....  ...+.+.+|++.+++++||||+++++.+. +...++++||+++++|
T Consensus         7 ~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   86 (265)
T cd06605           7 GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSL   86 (265)
T ss_pred             HHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCcH
Confidence            57999999999999975 58889999886443  23457889999999999999999999665 4678899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCC-CCeeecccCCCceeeCCCCceeEeccccccccc-----ccCCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSN-LPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-----NYATM  193 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~-~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-----~~~~~  193 (309)
                      .+++.... ..+++..+..++.+++.|+.+|   |+ .+++|+||+|+||+++.++.++|+|||.+....     ...++
T Consensus        87 ~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~l---H~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~  162 (265)
T cd06605          87 DKILKEVQ-GRIPERILGKIAVAVLKGLTYL---HEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVGT  162 (265)
T ss_pred             HHHHHHcc-CCCCHHHHHHHHHHHHHHHHHH---cCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcccCC
Confidence            99997632 7789999999999999999999   77 899999999999999999999999999875432     24567


Q ss_pred             CCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCc----cHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          194 PHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDV----DLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       194 ~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ..|++||...  ..+.++|+||||+++++|++|+.||....    .....+......      ..+.+....   ....+
T Consensus       163 ~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~---~~~~~  233 (265)
T cd06605         163 SSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE------PPPRLPSGK---FSPDF  233 (265)
T ss_pred             hhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcC------CCCCCChhh---cCHHH
Confidence            7899999643  34788999999999999999999996542    222222211110      011121111   23456


Q ss_pred             HHHHHHccCCCCCCCCChHHHHH
Q 021659          268 LAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .+++.+||..+|++|||+.+++.
T Consensus       234 ~~li~~~l~~~p~~Rpt~~~ll~  256 (265)
T cd06605         234 QDFVNLCLIKDPRERPSYKELLE  256 (265)
T ss_pred             HHHHHHHcCCCchhCcCHHHHhh
Confidence            67777999999999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=3.9e-34  Score=250.35  Aligned_cols=231  Identities=20%  Similarity=0.268  Sum_probs=182.8

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      +.||.|+||.||+|.. .++..+|+|.+.....  ..+.+.+|++++.+++||||+++++++.+ ...++|+||+++++|
T Consensus        10 ~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l   89 (277)
T cd06641          10 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA   89 (277)
T ss_pred             eeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCcH
Confidence            5799999999999986 4678999998753332  23568899999999999999999997654 678899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------cCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------YAT  192 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------~~~  192 (309)
                      .+++..   ..+++..+..++.+++.|+.+|   |+.+++|+||+|+||+++.++.++++|||++.....       ..+
T Consensus        90 ~~~i~~---~~~~~~~~~~~~~~l~~~l~~l---h~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  163 (277)
T cd06641          90 LDLLEP---GPLDETQIATILREILKGLDYL---HSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVG  163 (277)
T ss_pred             HHHHhc---CCCCHHHHHHHHHHHHHHHHHH---ccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhccccC
Confidence            999864   5689999999999999999999   889999999999999999999999999998764432       246


Q ss_pred             CCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          193 MPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       193 ~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      +..|.+||....  .+.++|+||||+++++|++|..||....... ..... ....     .+.+..    .....+.++
T Consensus       164 ~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-~~~~~-~~~~-----~~~~~~----~~~~~~~~~  232 (277)
T cd06641         164 TPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK-VLFLI-PKNN-----PPTLEG----NYSKPLKEF  232 (277)
T ss_pred             CccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH-HHHHH-hcCC-----CCCCCc----ccCHHHHHH
Confidence            678999997533  4678999999999999999999997543211 11111 1110     111111    123455667


Q ss_pred             HHHccCCCCCCCCChHHHHHH
Q 021659          271 ARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       271 ~~~cl~~dp~~Rps~~evl~~  291 (309)
                      +.+||+.+|+.||++.+++..
T Consensus       233 i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         233 VEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             HHHHccCChhhCcCHHHHHhC
Confidence            779999999999999999973

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=3.5e-34  Score=251.70  Aligned_cols=234  Identities=19%  Similarity=0.276  Sum_probs=185.3

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCHHH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLKE  121 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL~~  121 (309)
                      ..+|+|++|.||++... ++..+++|.+.......+.+.+|++.+++++|+|++++++.+. ....++++||+++++|.+
T Consensus        25 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~  104 (286)
T cd06614          25 EKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTD  104 (286)
T ss_pred             HhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCCcHHH
Confidence            57999999999999975 6888999998654445667899999999999999999999664 477889999999999999


Q ss_pred             hhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------cCCCC
Q 021659          122 HLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------YATMP  194 (309)
Q Consensus       122 ~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------~~~~~  194 (309)
                      ++.... ..+++..+..++.+++.||.+|   |+.+++|+||+|+||+++.++.++|+|||++.....       ..++.
T Consensus       105 ~l~~~~-~~l~~~~~~~i~~~i~~~L~~l---H~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~  180 (286)
T cd06614         105 IITQNF-VRMNEPQIAYVCREVLQGLEYL---HSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTP  180 (286)
T ss_pred             HHHHhc-cCCCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhccccCCc
Confidence            998632 3899999999999999999999   789999999999999999999999999998754322       23567


Q ss_pred             CCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHH
Q 021659          195 HSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVAR  272 (309)
Q Consensus       195 ~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~  272 (309)
                      .|.+||....  .+.++|+||||+++|+|++|+.||..............  .....     ...  .......+.+++.
T Consensus       181 ~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~-----~~~--~~~~~~~l~~li~  251 (286)
T cd06614         181 YWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITT--KGIPP-----LKN--PEKWSPEFKDFLN  251 (286)
T ss_pred             ccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--cCCCC-----Ccc--hhhCCHHHHHHHH
Confidence            8999996433  47889999999999999999999976543322221111  11111     100  1111245566777


Q ss_pred             HccCCCCCCCCChHHHHH
Q 021659          273 LCIKTKDKPTISIPQISR  290 (309)
Q Consensus       273 ~cl~~dp~~Rps~~evl~  290 (309)
                      +||+.+|..||++.+++.
T Consensus       252 ~~l~~~p~~Rpt~~~il~  269 (286)
T cd06614         252 KCLVKDPEKRPSAEELLQ  269 (286)
T ss_pred             HHhccChhhCcCHHHHhh
Confidence            999999999999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-34  Score=253.18  Aligned_cols=243  Identities=19%  Similarity=0.198  Sum_probs=183.9

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEecccc---ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQALN---LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~---~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      .+.||.|++|.||+|.. .+|..|++|++....   ...+.+.+|++.+++++|||++++++++.+ ...++++||++ +
T Consensus         4 ~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-~   82 (283)
T cd07835           4 VEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-L   82 (283)
T ss_pred             heEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-c
Confidence            36799999999999996 468999999885432   223568899999999999999999997765 67789999996 5


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------cc
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NY  190 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~  190 (309)
                      +|.+++.......+++..+..++.+++.||.||   |+.+++||||+|+||+++.++.++|+|||++....       ..
T Consensus        83 ~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~l---H~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~  159 (283)
T cd07835          83 DLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYC---HSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHE  159 (283)
T ss_pred             CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCcc
Confidence            999998764335789999999999999999999   67899999999999999999999999999986432       12


Q ss_pred             CCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccc------------------cccc
Q 021659          191 ATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISS------------------SIHR  249 (309)
Q Consensus       191 ~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~------------------~~~~  249 (309)
                      .++..|++||...+   .+.++|+||||+++|+|++|+.||.................                  ....
T Consensus       160 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (283)
T cd07835         160 VVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPK  239 (283)
T ss_pred             ccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhccc
Confidence            34678999996532   36789999999999999999999976544332221110000                  0000


Q ss_pred             cccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          250 MIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       250 ~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ...+... .........+.+++.+||+++|++|||+.|++.
T Consensus       240 ~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         240 WARQDLS-KVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             ccccchh-hhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            0000000 001112356677888999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=9.4e-35  Score=263.48  Aligned_cols=175  Identities=17%  Similarity=0.216  Sum_probs=146.5

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHHH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLKE  121 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~~  121 (309)
                      +.||+|+||.||+|+.. .++.||+|.....     ....|+.++++++|+||+++++++.. ...++|+|++.+ +|.+
T Consensus        72 ~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~  145 (357)
T PHA03209         72 KTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYSS-DLYT  145 (357)
T ss_pred             EEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccCC-cHHH
Confidence            68999999999999974 4678999975322     23568999999999999999997654 677899999965 8888


Q ss_pred             hhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------ccCCCCC
Q 021659          122 HLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------NYATMPH  195 (309)
Q Consensus       122 ~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------~~~~~~~  195 (309)
                      ++... ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....      ...++..
T Consensus       146 ~l~~~-~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~  221 (357)
T PHA03209        146 YLTKR-SRPLPIDQALIIEKQILEGLRYL---HAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLAGTVE  221 (357)
T ss_pred             HHHhc-cCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEECCCCCEEEecCccccccccCccccccccccc
Confidence            87542 46789999999999999999999   77899999999999999999999999999986432      2357889


Q ss_pred             CCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCC
Q 021659          196 SSCPEDCST--QDCSNIIFQLGVLILELVTGQSPE  228 (309)
Q Consensus       196 ~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~  228 (309)
                      |+|||....  .+.++|||||||++|+|+++..|+
T Consensus       222 y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~  256 (357)
T PHA03209        222 TNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI  256 (357)
T ss_pred             ccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence            999997543  478999999999999999865544

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=1.2e-34  Score=250.84  Aligned_cols=231  Identities=18%  Similarity=0.184  Sum_probs=183.2

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      .+.||+|+||.||++... ++..+++|.+....    ...+.+.+|++++++++||||+++++++.+ ...++|+||+.+
T Consensus         5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   84 (258)
T cd05578           5 LRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLG   84 (258)
T ss_pred             EEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCC
Confidence            468999999999999975 58899999985432    234578899999999999999999996654 678899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------cc
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------NY  190 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------~~  190 (309)
                      ++|.+++..  ...+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++.++++|||++....      ..
T Consensus        85 ~~L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~l---h~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~  159 (258)
T cd05578          85 GDLRYHLSQ--KVKFSEEQVKFWICEIVLALEYL---HSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTST  159 (258)
T ss_pred             CCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCcccccc
Confidence            999999976  36899999999999999999999   77899999999999999999999999999876443      23


Q ss_pred             CCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCcc--HHHHHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          191 ATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVD--LIQWIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       191 ~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                      .++..|.+||...  ..+.++|+||||+++|+|++|..||.....  ..........       ..+..+..    ....
T Consensus       160 ~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~----~~~~  228 (258)
T cd05578         160 SGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET-------ADVLYPAT----WSTE  228 (258)
T ss_pred             CCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc-------ccccCccc----CcHH
Confidence            4667899999643  347899999999999999999999986543  2222211110       00111111    1256


Q ss_pred             HHHHHHHccCCCCCCCCCh--HHHH
Q 021659          267 LLAVARLCIKTKDKPTISI--PQIS  289 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rps~--~evl  289 (309)
                      +.+++.+||..||.+||++  .|++
T Consensus       229 ~~~~i~~~l~~~p~~R~~~~~~~l~  253 (258)
T cd05578         229 AIDAINKLLERDPQKRLGDNLKDLK  253 (258)
T ss_pred             HHHHHHHHccCChhHcCCccHHHHh
Confidence            6677779999999999999  6654

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-36  Score=246.76  Aligned_cols=234  Identities=18%  Similarity=0.189  Sum_probs=181.9

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecc---ccccHHHHHHHHHHHccCCCCCcceEeeeE-eCCeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQA---LNLEKDAFYREIQLLGRLHHRHLLALQGFS-TGRKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~---~~~~~~~~~~ei~~l~~l~h~niv~~~~~~-~~~~~~lv~e~~~~~s  118 (309)
                      +.||+|.|+.|+++.. ++|+.+|+|++..   ...+.+++.+|+.+-+.|+||||+++.+-. .+...|+|+|++.|++
T Consensus        17 e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~d   96 (355)
T KOG0033|consen   17 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE   96 (355)
T ss_pred             HHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccchH
Confidence            5799999999999985 5688899998843   334567899999999999999999999954 4577899999999999


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC---CCceeEecccccccccc------
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE---NFTAKLSDVGFFNSVRN------  189 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~---~~~~kl~dfg~~~~~~~------  189 (309)
                      |-.-|..  ....++..+..++.||+.||.||   |.++|+|||+||.|+++-+   ..-+|++|||++...+.      
T Consensus        97 l~~eIV~--R~~ySEa~aSH~~rQiLeal~yC---H~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~G  171 (355)
T KOG0033|consen   97 LFEDIVA--REFYSEADASHCIQQILEALAYC---HSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWHG  171 (355)
T ss_pred             HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHH---HhcCceeccCChhheeeeeccCCCceeecccceEEEeCCcccccc
Confidence            9876655  36688889999999999999999   8899999999999999954   35699999999976653      


Q ss_pred             cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          190 YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       190 ~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ..|||+|++||...  .++..+|||+.|++||-|+.|.+||.+...-.-+.+........+.   |.  .+.-+.+.++ 
T Consensus       172 ~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~---~~--w~~is~~Ak~-  245 (355)
T KOG0033|consen  172 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPS---PE--WDTVTPEAKS-  245 (355)
T ss_pred             ccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCC---cc--cCcCCHHHHH-
Confidence            47899999999743  3478899999999999999999999874332222221111111110   00  1111233444 


Q ss_pred             HHHHHHccCCCCCCCCChHHHHH
Q 021659          268 LAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                        ++.+||..||.+|.|+.|.++
T Consensus       246 --LvrrML~~dP~kRIta~EAL~  266 (355)
T KOG0033|consen  246 --LIRRMLTVNPKKRITADEALK  266 (355)
T ss_pred             --HHHHHhccChhhhccHHHHhC
Confidence              455999999999999999773

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=1.4e-34  Score=251.80  Aligned_cols=239  Identities=19%  Similarity=0.264  Sum_probs=181.4

Q ss_pred             ccccccCCCceEEEEEEcC--CcEEEEEEecccc-----------ccHHHHHHHHHHHcc-CCCCCcceEeeeEeC-Cee
Q 021659           43 HRIVYTNSHGAAYKARFQD--GEVALVKEIQALN-----------LEKDAFYREIQLLGR-LHHRHLLALQGFSTG-RKR  107 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~--~~~va~K~~~~~~-----------~~~~~~~~ei~~l~~-l~h~niv~~~~~~~~-~~~  107 (309)
                      .+.||+|+||.||++....  +..+|+|.+....           ....++..|+.++.+ ++||||+++++++.. ...
T Consensus         5 ~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~   84 (269)
T cd08528           5 LEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRL   84 (269)
T ss_pred             hhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeE
Confidence            3679999999999999754  6889999874211           112346778887765 689999999997654 778


Q ss_pred             EEEEeeCCCCCHHHhhcC--CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccc
Q 021659          108 LLVFDNIENGSLKEHLND--PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFN  185 (309)
Q Consensus       108 ~lv~e~~~~~sL~~~i~~--~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~  185 (309)
                      +++|||+++++|.+++..  .....+++..++.++.+++.||.+||  ...+++|+||+|+||+++.++.++|+|||.+.
T Consensus        85 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh--~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~  162 (269)
T cd08528          85 YIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLH--KEKRIVHRDLTPNNIMLGEDDKVTITDFGLAK  162 (269)
T ss_pred             EEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhc--cCCceeecCCCHHHEEECCCCcEEEeccccee
Confidence            899999999999988743  12467899999999999999999993  24789999999999999999999999999986


Q ss_pred             ccc------ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCC
Q 021659          186 SVR------NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGG  257 (309)
Q Consensus       186 ~~~------~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  257 (309)
                      ...      ...++..|.+||....  .+.++|+||||+++|+|++|+.||...... ....... ....    .+.. .
T Consensus       163 ~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~-~~~~~~~-~~~~----~~~~-~  235 (269)
T cd08528         163 QKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML-SLATKIV-EAVY----EPLP-E  235 (269)
T ss_pred             ecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH-HHHHHHh-hccC----CcCC-c
Confidence            443      2346778999997544  467899999999999999999999654322 1111111 1111    1111 1


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHh
Q 021659          258 SYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQ  293 (309)
Q Consensus       258 ~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~  293 (309)
                      ...   ...+.+++.+||+.||+.||++.|+.+.++
T Consensus       236 ~~~---~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         236 GMY---SEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             ccC---CHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            111   244556666999999999999999999886

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=3.8e-34  Score=251.74  Aligned_cols=240  Identities=16%  Similarity=0.190  Sum_probs=182.7

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC---CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG---RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~---~~~~lv~e~~~~~  117 (309)
                      +.||.|++|.||++... +++.+|+|.+.....  ....+.+|++++++++||||+++++++.+   ...++||||++++
T Consensus         7 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~   86 (287)
T cd06621           7 SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGG   86 (287)
T ss_pred             EEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCC
Confidence            58999999999999974 578899998854332  34578999999999999999999997643   3578999999999


Q ss_pred             CHHHhhcC--CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-----cc
Q 021659          118 SLKEHLND--PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-----NY  190 (309)
Q Consensus       118 sL~~~i~~--~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-----~~  190 (309)
                      +|.+++..  .....++...+..++.+++.||.||   |+.+++|+||+|+||+++.++.++++|||++....     ..
T Consensus        87 ~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~l---H~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~  163 (287)
T cd06621          87 SLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYL---HSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGTF  163 (287)
T ss_pred             CHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEEecCCeEEEeeccccccccccccccc
Confidence            99987643  1246688999999999999999999   78899999999999999999999999999876432     22


Q ss_pred             CCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCc----cHHHHHHHhcccccccccccCcCCCCCCHHHH
Q 021659          191 ATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDV----DLIQWIQESSISSSIHRMIDPDLGGSYDSKEL  264 (309)
Q Consensus       191 ~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  264 (309)
                      .++..|.+||...  ..+.++|+||||+++|+|++|+.||....    ......... .......+. ......  ....
T Consensus       164 ~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~--~~~~  239 (287)
T cd06621         164 TGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYI-VNMPNPELK-DEPGNG--IKWS  239 (287)
T ss_pred             cCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHH-hcCCchhhc-cCCCCC--CchH
Confidence            4567899999643  34778999999999999999999997552    111111111 110111111 111000  1123


Q ss_pred             HHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          265 KKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       265 ~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ..+.+++.+||..+|.+|||+.|++.
T Consensus       240 ~~~~~li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         240 EEFKDFIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHHh
Confidence            45667777999999999999999986

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-35  Score=266.20  Aligned_cols=239  Identities=18%  Similarity=0.279  Sum_probs=191.5

Q ss_pred             cccccCCCceEEEEEEc---CC--cEEEEEEecc--ccccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ---DG--EVALVKEIQA--LNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~---~~--~~va~K~~~~--~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~  116 (309)
                      ++||.|-||.||.|.+.   .|  -.||+|..+.  ...+.+.|..|.-++++++||||++++|.|.+...++|||.++-
T Consensus       395 r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P~WivmEL~~~  474 (974)
T KOG4257|consen  395 RLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQPMWIVMELAPL  474 (974)
T ss_pred             HhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccceeEEEecccc
Confidence            57999999999999963   23  3478887753  33456789999999999999999999999999999999999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccccc------
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNY------  190 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~------  190 (309)
                      |-|+.|++.+ ...++..+...++.|++.||+||   |++.++||||-.+|||+.++..||++|||+++.....      
T Consensus       475 GELr~yLq~n-k~sL~l~tL~ly~~Qi~talaYL---eSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS  550 (974)
T KOG4257|consen  475 GELREYLQQN-KDSLPLRTLTLYCYQICTALAYL---ESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKAS  550 (974)
T ss_pred             hhHHHHHHhc-cccchHHHHHHHHHHHHHHHHHH---HhhchhhhhhhhhheeecCcceeeecccchhhhccccchhhcc
Confidence            9999999864 56799999999999999999999   8999999999999999999999999999999866532      


Q ss_pred             --CCCCCCCCCCC--CCCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHH
Q 021659          191 --ATMPHSSCPED--CSTQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELK  265 (309)
Q Consensus       191 --~~~~~~~~PE~--~~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  265 (309)
                        .-...|++||-  ++.++.++|||-||+.+||+++ |..||.+-.+..-  ....+.+.       ++  ..++++..
T Consensus       551 ~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDV--I~~iEnGe-------Rl--P~P~nCPp  619 (974)
T KOG4257|consen  551 RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDV--IGHIENGE-------RL--PCPPNCPP  619 (974)
T ss_pred             ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccce--EEEecCCC-------CC--CCCCCCCh
Confidence              12347999994  6777999999999999999886 9999986432110  00111111       11  11222334


Q ss_pred             HHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          266 KLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       266 ~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                      .|-.++.+||.++|.+||+..++...|...+.
T Consensus       620 ~LYslmskcWayeP~kRPrftei~~~lsdv~q  651 (974)
T KOG4257|consen  620 ALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ  651 (974)
T ss_pred             HHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence            45577779999999999999999888876655

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=3.5e-34  Score=251.04  Aligned_cols=235  Identities=18%  Similarity=0.254  Sum_probs=177.4

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEeccccc--cHHHHHHHHHH-HccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL--EKDAFYREIQL-LGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~--~~~~~~~ei~~-l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      .+.||+|+||.||++... +++.||+|.+.....  ....+..|+.. ++.++||||+++++++.. ...+++|||+++ 
T Consensus         6 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~-   84 (283)
T cd06617           6 IEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMDT-   84 (283)
T ss_pred             EEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhcc-
Confidence            357999999999999974 589999999864332  23456666665 556689999999997754 678899999974 


Q ss_pred             CHHHhhcCC--CCCCCCHHHHHHHHHHHHHHHhhhhhcCCC-CeeecccCCCceeeCCCCceeEecccccccccc-----
Q 021659          118 SLKEHLNDP--LKTPLDWKTRLQIAIGVAAALEYLLLFSNL-PMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-----  189 (309)
Q Consensus       118 sL~~~i~~~--~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~-~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-----  189 (309)
                      +|.+++...  ....+++..++.++.|++.||.||   |++ +++||||+|+||+++.++.+||+|||++.....     
T Consensus        85 ~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~  161 (283)
T cd06617          85 SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYL---HSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKT  161 (283)
T ss_pred             cHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHH---hhcCCeecCCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence            888777531  246789999999999999999999   665 899999999999999999999999999865422     


Q ss_pred             -cCCCCCCCCCCCCC------CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHH
Q 021659          190 -YATMPHSSCPEDCS------TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSK  262 (309)
Q Consensus       190 -~~~~~~~~~PE~~~------~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  262 (309)
                       ..++..|.+||...      ..+.++|+||||+++++|++|+.||.......+...... ...     .+.+....   
T Consensus       162 ~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-~~~-----~~~~~~~~---  232 (283)
T cd06617         162 IDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVV-EEP-----SPQLPAEK---  232 (283)
T ss_pred             cccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHH-hcC-----CCCCCccc---
Confidence             34667899999643      236789999999999999999999965332222221111 111     11111111   


Q ss_pred             HHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          263 ELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       263 ~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ....+.+++.+||..+|+.||++.+++.
T Consensus       233 ~~~~l~~li~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         233 FSPEFQDFVNKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             cCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            1245666777999999999999999985

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-34  Score=253.39  Aligned_cols=243  Identities=20%  Similarity=0.276  Sum_probs=182.4

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEecccc---ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALN---LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~---~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      .+.||+|++|.||+|... ++..|++|.+....   ...+.+.+|++++++++|+||+++++++.. ...++++||++++
T Consensus         6 ~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~   85 (288)
T cd07833           6 LGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERT   85 (288)
T ss_pred             EEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCC
Confidence            367999999999999975 57899999885432   234678999999999999999999997654 6788999999987


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc--------
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN--------  189 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~--------  189 (309)
                      .+..+...  ...+++..+..++.+++.||.||   |..+++|+||+|+||+++.++.++|+|||++.....        
T Consensus        86 ~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~L---H~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~  160 (288)
T cd07833          86 LLELLEAS--PGGLPPDAVRSYIWQLLQAIAYC---HSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTD  160 (288)
T ss_pred             HHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccC
Confidence            77766654  45689999999999999999999   778999999999999999999999999998764332        


Q ss_pred             cCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccc----------------ccc
Q 021659          190 YATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSI----------------HRM  250 (309)
Q Consensus       190 ~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~----------------~~~  250 (309)
                      ..++..|.+||...   ..+.++|+||||+++++|++|+.||.+..............+..                ...
T Consensus       161 ~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (288)
T cd07833         161 YVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAF  240 (288)
T ss_pred             cccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccccccc
Confidence            34467799999643   34678999999999999999999997654332211110000000                000


Q ss_pred             ccCcCC----CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          251 IDPDLG----GSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       251 ~~~~l~----~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ......    ..+.......+.+++.+||..+|++|||+.+++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         241 PEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             CCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence            000000    0001111456777888999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=1.3e-34  Score=250.70  Aligned_cols=237  Identities=21%  Similarity=0.244  Sum_probs=184.9

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC---CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG---RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~---~~~~lv~e~~~~  116 (309)
                      +.||.|++|.||++.. .++..+++|.+.....   ..+.+..|++++++++|+||+++++++..   ...++++||+++
T Consensus         6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~   85 (265)
T cd08217           6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEG   85 (265)
T ss_pred             eeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccC
Confidence            5799999999999986 4678899998854332   23568889999999999999999996542   456899999999


Q ss_pred             CCHHHhhcCC--CCCCCCHHHHHHHHHHHHHHHhhhhhcC--CCCeeecccCCCceeeCCCCceeEeccccccccc----
Q 021659          117 GSLKEHLNDP--LKTPLDWKTRLQIAIGVAAALEYLLLFS--NLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----  188 (309)
Q Consensus       117 ~sL~~~i~~~--~~~~l~~~~~~~i~~~i~~~l~~lh~~h--~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----  188 (309)
                      ++|.+++...  ....+++..+..++.+++.||.+||..+  +.+++|+||+|+||+++.++.++++|||++....    
T Consensus        86 ~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~  165 (265)
T cd08217          86 GDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSS  165 (265)
T ss_pred             CCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCcc
Confidence            9999998642  2467899999999999999999994322  8899999999999999999999999999886543    


Q ss_pred             ---ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHH
Q 021659          189 ---NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKE  263 (309)
Q Consensus       189 ---~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  263 (309)
                         ...++..|++||....  .+.++|+||||+++++|++|+.||.... ....... ......     +.+    ....
T Consensus       166 ~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-~~~~~~~-~~~~~~-----~~~----~~~~  234 (265)
T cd08217         166 FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN-QLQLASK-IKEGKF-----RRI----PYRY  234 (265)
T ss_pred             cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC-HHHHHHH-HhcCCC-----CCC----cccc
Confidence               2356788999997544  3678999999999999999999997654 2222211 111111     111    1122


Q ss_pred             HHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          264 LKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       264 ~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      ...+.+++.+|+..+|++||++.+|++.
T Consensus       235 ~~~~~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         235 SSELNEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             CHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence            3556677779999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-36  Score=254.76  Aligned_cols=231  Identities=19%  Similarity=0.276  Sum_probs=190.1

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEee-eEeCCeeEEEEeeCCCCCHHH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQG-FSTGRKRLLVFDNIENGSLKE  121 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~-~~~~~~~~lv~e~~~~~sL~~  121 (309)
                      .+||+|+||.||++.+ ++|.++|+|.++.. .+-+++..||.++++-..|++|++|| |+.....++|||||..||+.+
T Consensus        39 ~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSD  117 (502)
T KOG0574|consen   39 GKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISD  117 (502)
T ss_pred             HHhcCCcchHHHHHHHhccCcEEEEEecCcc-chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHHH
Confidence            5799999999999986 56899999998753 46788999999999999999999999 666788999999999999999


Q ss_pred             hhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc-------cccCCCC
Q 021659          122 HLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-------RNYATMP  194 (309)
Q Consensus       122 ~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-------~~~~~~~  194 (309)
                      .+..+ +.++++.+...++.+.++||+||   |...-+|||||..|||++-+|..|++|||.+..+       +...||+
T Consensus       118 I~R~R-~K~L~E~EIs~iL~~TLKGL~YL---H~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIGTP  193 (502)
T KOG0574|consen  118 IMRAR-RKPLSEQEISAVLRDTLKGLQYL---HDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIGTP  193 (502)
T ss_pred             HHHHh-cCCccHHHHHHHHHHHHhHHHHH---HHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccccCc
Confidence            98764 68899999999999999999999   6677899999999999999999999999998644       3568999


Q ss_pred             CCCCCCCC--CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCC-CHHH-HHHHHHH
Q 021659          195 HSSCPEDC--STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSY-DSKE-LKKLLAV  270 (309)
Q Consensus       195 ~~~~PE~~--~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~-~~~l~~l  270 (309)
                      .|+|||..  .+++..+||||||++.+||..|++||.+--....           .-++....+..+ .+++ +.++-++
T Consensus       194 FWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRA-----------IFMIPT~PPPTF~KPE~WS~~F~DF  262 (502)
T KOG0574|consen  194 FWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRA-----------IFMIPTKPPPTFKKPEEWSSEFNDF  262 (502)
T ss_pred             ccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccce-----------eEeccCCCCCCCCChHhhhhHHHHH
Confidence            99999964  4568899999999999999999999975432211           111112222222 1221 3455566


Q ss_pred             HHHccCCCCCCCCChHHHHH
Q 021659          271 ARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       271 ~~~cl~~dp~~Rps~~evl~  290 (309)
                      +.+||.+.|++|.|+.++++
T Consensus       263 i~~CLiK~PE~R~TA~~L~~  282 (502)
T KOG0574|consen  263 IRSCLIKKPEERKTALRLCE  282 (502)
T ss_pred             HHHHhcCCHHHHHHHHHHhh
Confidence            66999999999999998874

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=4.2e-34  Score=246.28  Aligned_cols=233  Identities=20%  Similarity=0.275  Sum_probs=186.7

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc---ccHHHHHHHHHHHccCCCCCcceEeeeEeC---CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN---LEKDAFYREIQLLGRLHHRHLLALQGFSTG---RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~---~~~~~~~~ei~~l~~l~h~niv~~~~~~~~---~~~~lv~e~~~~  116 (309)
                      +.||+|++|.||+|... +++.+++|.+....   ...+.+.+|++.+++++|+||+++++.+..   ...++++||+++
T Consensus         6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~   85 (260)
T cd06606           6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSG   85 (260)
T ss_pred             eEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCC
Confidence            57999999999999975 68899999986544   235678899999999999999999997754   467799999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------  189 (309)
                      ++|.+++..  ...+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++.++|+|||.+.....       
T Consensus        86 ~~L~~~~~~--~~~~~~~~~~~~~~~l~~~l~~l---h~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~  160 (260)
T cd06606          86 GSLSSLLKK--FGKLPEPVIRKYTRQILEGLAYL---HSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGT  160 (260)
T ss_pred             CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccc
Confidence            999999976  34899999999999999999999   778999999999999999999999999998764432       


Q ss_pred             --cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHH
Q 021659          190 --YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELK  265 (309)
Q Consensus       190 --~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  265 (309)
                        ..++..|.+||....  .+.++||||||+++++|++|..||...................     +.++    .....
T Consensus       161 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-----~~~~----~~~~~  231 (260)
T cd06606         161 GSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEP-----PEIP----EHLSE  231 (260)
T ss_pred             cCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCC-----cCCC----cccCH
Confidence              245678999997543  4788999999999999999999998665333333222211111     1111    11135


Q ss_pred             HHHHHHHHccCCCCCCCCChHHHHH
Q 021659          266 KLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       266 ~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .+.+++.+|+..+|++||++.+++.
T Consensus       232 ~l~~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         232 EAKDFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             HHHHHHHHhCcCChhhCCCHHHHhh
Confidence            5667777999999999999999985

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-35  Score=261.10  Aligned_cols=232  Identities=19%  Similarity=0.223  Sum_probs=191.8

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      ++-||+|.|..|-++++ -.|..||+|++.+...   ....++.|+..++-++|||||++|.+.+. ...|+|+|.=++|
T Consensus        23 ekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~G  102 (864)
T KOG4717|consen   23 EKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGG  102 (864)
T ss_pred             hhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCc
Confidence            35799999999999985 4789999999965544   35678999999999999999999997754 7899999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeC-CCCceeEecccccccc------ccc
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLD-ENFTAKLSDVGFFNSV------RNY  190 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~-~~~~~kl~dfg~~~~~------~~~  190 (309)
                      +|.+||-.. ...+.+..+.+++.||+.|+.||   |+..++||||||.|+.+. +-|-|||.|||++..+      ...
T Consensus       103 Dl~DyImKH-e~Gl~E~La~kYF~QI~~AI~YC---HqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~Ts  178 (864)
T KOG4717|consen  103 DLFDYIMKH-EEGLNEDLAKKYFAQIVHAISYC---HQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTTS  178 (864)
T ss_pred             hHHHHHHhh-hccccHHHHHHHHHHHHHHHHHH---hhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcchhhcc
Confidence            999999652 46799999999999999999999   677799999999998765 5689999999998654      345


Q ss_pred             CCCCCCCCCCCCCCC---CCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          191 ATMPHSSCPEDCSTQ---DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       191 ~~~~~~~~PE~~~~~---~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      .|+..|.|||+..+.   -++.||||||++||.|++|++||...          +..+.+..+.|=..  ..++....++
T Consensus       179 CGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeA----------NDSETLTmImDCKY--tvPshvS~eC  246 (864)
T KOG4717|consen  179 CGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEA----------NDSETLTMIMDCKY--TVPSHVSKEC  246 (864)
T ss_pred             cchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccc----------cchhhhhhhhcccc--cCchhhhHHH
Confidence            788999999986654   47899999999999999999999743          22233333333332  2345557788


Q ss_pred             HHHHHHccCCCCCCCCChHHHHH
Q 021659          268 LAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .++|..||..||+.|.+.+||..
T Consensus       247 rdLI~sMLvRdPkkRAslEeI~s  269 (864)
T KOG4717|consen  247 RDLIQSMLVRDPKKRASLEEIVS  269 (864)
T ss_pred             HHHHHHHHhcCchhhccHHHHhc
Confidence            88999999999999999999874

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-35  Score=265.52  Aligned_cols=254  Identities=17%  Similarity=0.237  Sum_probs=197.5

Q ss_pred             HHHHhhcccccccccCCCceEEEEEEcCCcEEEEEEecccccc--HHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEE
Q 021659           34 DIKMATDGFHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLE--KDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLV  110 (309)
Q Consensus        34 ~i~~~~~~~~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~--~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv  110 (309)
                      |+.+..=-|.++||+|-||.|..+....+..||+|+++.....  +.+|.+||++|.+|+||||+.++|+|.. +..++|
T Consensus       534 EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI  613 (807)
T KOG1094|consen  534 EFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMI  613 (807)
T ss_pred             hcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHH
Confidence            3333333355789999999999999988899999999654433  4689999999999999999999998864 667799


Q ss_pred             EeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc--
Q 021659          111 FDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR--  188 (309)
Q Consensus       111 ~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~--  188 (309)
                      +||+++|+|.+++.+.....+.-..-..++.||++|++||   .+..++||||.++|+|++++.++||+|||.++-+-  
T Consensus       614 ~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYL---es~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg  690 (807)
T KOG1094|consen  614 TEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYL---ESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSG  690 (807)
T ss_pred             HHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHH---HhhchhhccccccceeecCcccEEecCcccccccccC
Confidence            9999999999999874334444555677999999999999   99999999999999999999999999999987221  


Q ss_pred             -------ccCCCCCCCCCCC--CCCCCCCCcEeehhhHHHHHH--hCCCCCCCC--ccHHHHHHHhcccccccccccCcC
Q 021659          189 -------NYATMPHSSCPED--CSTQDCSNIIFQLGVLILELV--TGQSPEEGD--VDLIQWIQESSISSSIHRMIDPDL  255 (309)
Q Consensus       189 -------~~~~~~~~~~PE~--~~~~~~~~Dv~slG~~l~~l~--tg~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~l  255 (309)
                             ...-...|+|+|.  ...++.++|||+||+++||++  +.+.||...  ++.+....+...++.....     
T Consensus       691 ~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~-----  765 (807)
T KOG1094|consen  691 DYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVV-----  765 (807)
T ss_pred             CceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCccee-----
Confidence                   1233468999995  455689999999999999975  689999753  3333434333332221111     


Q ss_pred             CCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhh
Q 021659          256 GGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEV  296 (309)
Q Consensus       256 ~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~  296 (309)
                       -..+......+.+++++||..|-++||+.+++...|++..
T Consensus       766 -l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~~  805 (807)
T KOG1094|consen  766 -LSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQEDA  805 (807)
T ss_pred             -ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHhc
Confidence             1112223456778899999999999999999999998653

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2e-34  Score=267.90  Aligned_cols=175  Identities=21%  Similarity=0.240  Sum_probs=148.0

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCHHH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLKE  121 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL~~  121 (309)
                      +.||+|+||.||++... .++.||+|...     ...+.+|++++++|+|+||+++++++. +...++|||++. ++|.+
T Consensus       175 ~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~-----~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L~~  248 (461)
T PHA03211        175 RALTPGSEGCVFESSHPDYPQRVVVKAGW-----YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDLYT  248 (461)
T ss_pred             EEEccCCCeEEEEEEECCCCCEEEEeccc-----ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCHHH
Confidence            57999999999999975 47889999532     224678999999999999999999765 467889999995 58888


Q ss_pred             hhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---------ccCC
Q 021659          122 HLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---------NYAT  192 (309)
Q Consensus       122 ~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---------~~~~  192 (309)
                      ++... ...+++..++.++.|++.||.||   |+.+|+||||||+||+++.++.++|+|||++....         ...+
T Consensus       249 ~l~~~-~~~l~~~~~~~i~~qi~~aL~yL---H~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~G  324 (461)
T PHA03211        249 YLGAR-LRPLGLAQVTAVARQLLSAIDYI---HGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAG  324 (461)
T ss_pred             HHHhc-CCCCCHHHHHHHHHHHHHHHHHH---HHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCC
Confidence            87642 34799999999999999999999   78899999999999999999999999999986432         1247


Q ss_pred             CCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCC
Q 021659          193 MPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPE  228 (309)
Q Consensus       193 ~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~  228 (309)
                      |..|++||...+  .+.++|||||||++|||++|..|+
T Consensus       325 T~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~l  362 (461)
T PHA03211        325 TVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASL  362 (461)
T ss_pred             CcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCc
Confidence            889999997543  478899999999999999987654

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=1.9e-34  Score=248.98  Aligned_cols=235  Identities=22%  Similarity=0.300  Sum_probs=184.4

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEeccc---cccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQAL---NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~---~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      .+.||+|++|.||++... ++..+|+|.+...   ....+.+.+|++++++++|+|++++++.+.. ...++++||++++
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~   84 (257)
T cd08225           5 IKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGG   84 (257)
T ss_pred             EEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCC
Confidence            367999999999999974 5788999998543   2344578899999999999999999997654 6778999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCC-ceeEecccccccccc-------
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENF-TAKLSDVGFFNSVRN-------  189 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~-~~kl~dfg~~~~~~~-------  189 (309)
                      +|.+++.......+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++ .++++|||.+.....       
T Consensus        85 ~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---h~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~  161 (257)
T cd08225          85 DLMKRINRQRGVLFSEDQILSWFVQISLGLKHI---HDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYT  161 (257)
T ss_pred             cHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcccccc
Confidence            999999764455689999999999999999999   778999999999999999885 469999998764432       


Q ss_pred             cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          190 YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       190 ~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ..++..|.+||...  ..+.++|+||||+++++|++|+.||..... .+....... ....    + ...    .....+
T Consensus       162 ~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~-~~~~----~-~~~----~~~~~~  230 (257)
T cd08225         162 CVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL-HQLVLKICQ-GYFA----P-ISP----NFSRDL  230 (257)
T ss_pred             cCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH-HHHHHHHhc-ccCC----C-CCC----CCCHHH
Confidence            24667899999643  347889999999999999999999975432 222222111 1111    1 111    112456


Q ss_pred             HHHHHHccCCCCCCCCChHHHHHH
Q 021659          268 LAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      .+++.+||..+|++|||+.|++..
T Consensus       231 ~~~i~~~l~~~p~~Rpt~~~ll~~  254 (257)
T cd08225         231 RSLISQLFKVSPRDRPSITSILKR  254 (257)
T ss_pred             HHHHHHHhccChhhCcCHHHHhhC
Confidence            677779999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=3.8e-34  Score=251.99  Aligned_cols=242  Identities=18%  Similarity=0.201  Sum_probs=179.9

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      +.||+|++|.||++... +++.||+|.+.....  ....+.+|++++++++|+||+++++++.+ ...++||||+.+ +|
T Consensus        11 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~L   89 (291)
T cd07844          11 DKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLDT-DL   89 (291)
T ss_pred             EEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCCC-CH
Confidence            58999999999999975 578999999853322  23456789999999999999999997765 678899999986 99


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYAT  192 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~~  192 (309)
                      .+++... ...+++..+..++.|+++||.||   |+.+++|+||+|+||+++.++.++|+|||++....       ...+
T Consensus        90 ~~~~~~~-~~~~~~~~~~~~~~ql~~al~~l---H~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  165 (291)
T cd07844          90 KQYMDDC-GGGLSMHNVRLFLFQLLRGLAYC---HQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNEVV  165 (291)
T ss_pred             HHHHHhC-CCCCCHHHHHHHHHHHHHHHHHH---HhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCcccccccc
Confidence            9988653 34688999999999999999999   78899999999999999999999999999875432       1234


Q ss_pred             CCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhc---c---ccccccc-------------
Q 021659          193 MPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESS---I---SSSIHRM-------------  250 (309)
Q Consensus       193 ~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~---~---~~~~~~~-------------  250 (309)
                      +..|.+||...   ..+.++||||||+++++|++|+.||.........+....   .   .......             
T Consensus       166 ~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (291)
T cd07844         166 TLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPF  245 (291)
T ss_pred             ccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccc
Confidence            67799999653   246789999999999999999999975542222111100   0   0000000             


Q ss_pred             cc-CcCCCCC-CHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          251 ID-PDLGGSY-DSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       251 ~~-~~l~~~~-~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .. ..+.... .......+.+++.+||+.+|++|||+.+++.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         246 YPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             cCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence            00 0000000 0001245667778999999999999999875

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=4.8e-34  Score=250.96  Aligned_cols=232  Identities=20%  Similarity=0.282  Sum_probs=182.9

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc-cHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL-EKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~-~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL~  120 (309)
                      +.||+|++|.||++.. .+++.+++|.+..... ..+.+.+|+.+++.++|||++++++++. ....++++||+++++|.
T Consensus        25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~  104 (285)
T cd06648          25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALT  104 (285)
T ss_pred             eEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCHH
Confidence            5899999999999986 4678899998854332 2456889999999999999999999665 46788999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccCCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYATM  193 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~~~  193 (309)
                      +++..   ..+++..+..++.+++.|+++|   |+.+++||||+|+||+++.++.++++|||.+....       ...++
T Consensus       105 ~~~~~---~~~~~~~~~~~~~ql~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~  178 (285)
T cd06648         105 DIVTH---TRMNEEQIATVCLAVLKALSFL---HAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGT  178 (285)
T ss_pred             HHHHh---CCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccCC
Confidence            99875   5688999999999999999999   78899999999999999999999999999875332       23467


Q ss_pred             CCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHH
Q 021659          194 PHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVA  271 (309)
Q Consensus       194 ~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~  271 (309)
                      ..|++||...+  .+.++||||||+++++|++|+.||......... ...... .     .+.+...  ......+.+++
T Consensus       179 ~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~-~~~~~~-~-----~~~~~~~--~~~~~~l~~li  249 (285)
T cd06648         179 PYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAM-KRIRDN-L-----PPKLKNL--HKVSPRLRSFL  249 (285)
T ss_pred             ccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHH-HHHHhc-C-----CCCCccc--ccCCHHHHHHH
Confidence            78999997543  478899999999999999999998765432221 111111 0     1111111  01124566777


Q ss_pred             HHccCCCCCCCCChHHHHH
Q 021659          272 RLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       272 ~~cl~~dp~~Rps~~evl~  290 (309)
                      .+||..+|++|||+.++++
T Consensus       250 ~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         250 DRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             HHHcccChhhCcCHHHHcc
Confidence            7999999999999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=6.6e-34  Score=250.58  Aligned_cols=242  Identities=15%  Similarity=0.122  Sum_probs=178.0

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      +.||+|++|.||+|.. .+++.|++|.+....  .....+.+|+++++.++|+||+++.+++.+ ...++|+||+. +++
T Consensus        11 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~~l   89 (291)
T cd07870          11 EKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-TDL   89 (291)
T ss_pred             EEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-CCH
Confidence            6899999999999986 458899999985432  223467889999999999999999997655 67789999996 577


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYAT  192 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~~  192 (309)
                      .+.+... ...+++..+..++.|++.||.||   |..+++|+||+|+||+++.++.++|+|||++....       ...+
T Consensus        90 ~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~l---H~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~  165 (291)
T cd07870          90 AQYMIQH-PGGLHPYNVRLFMFQLLRGLAYI---HGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVV  165 (291)
T ss_pred             HHHHHhC-CCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCCccc
Confidence            7766432 34578888999999999999999   77899999999999999999999999999876432       2245


Q ss_pred             CCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcc----------------cccccccccC
Q 021659          193 MPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSI----------------SSSIHRMIDP  253 (309)
Q Consensus       193 ~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~----------------~~~~~~~~~~  253 (309)
                      +..|.+||...+   .+.++||||||+++++|++|..||.........+.....                +.....+...
T Consensus       166 ~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (291)
T cd07870         166 TLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLP  245 (291)
T ss_pred             cccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccc
Confidence            778999997533   467899999999999999999999765433222211110                0000000000


Q ss_pred             cCCCCC-----CHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          254 DLGGSY-----DSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       254 ~l~~~~-----~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ......     .......+.+++.+|+..||..|||+.|++.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         246 CKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             cCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence            000000     0001234556667999999999999999874

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=1.6e-34  Score=250.10  Aligned_cols=233  Identities=17%  Similarity=0.229  Sum_probs=180.4

Q ss_pred             cccCCCceEEEEEEc-CCcEEEEEEeccccc----cHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCH
Q 021659           46 VYTNSHGAAYKARFQ-DGEVALVKEIQALNL----EKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSL  119 (309)
Q Consensus        46 lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~----~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL  119 (309)
                      ||+|++|.||++... +++.+++|.+.....    ..+.+.+|++++++++|+||+++++.+. ....++++||+++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            689999999999985 488999999854332    3456889999999999999999998665 4678899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc----------
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN----------  189 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~----------  189 (309)
                      .+++..  ...+++..+..++.|++.||.+|   |+.+++|+||+|+||+++.++.++++|||++.....          
T Consensus        81 ~~~l~~--~~~~~~~~~~~i~~qi~~~L~~l---H~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  155 (265)
T cd05579          81 ASLLEN--VGSLDEDVARIYIAEIVLALEYL---HSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDE  155 (265)
T ss_pred             HHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccc
Confidence            999976  34789999999999999999999   788999999999999999999999999998754321          


Q ss_pred             -----cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHH
Q 021659          190 -----YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSK  262 (309)
Q Consensus       190 -----~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  262 (309)
                           ..++..|.+||....  .+.++|+||||++++++++|+.||...... ........ +..      ......  .
T Consensus       156 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-~~~~~~~~-~~~------~~~~~~--~  225 (265)
T cd05579         156 KEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE-EIFQNILN-GKI------EWPEDV--E  225 (265)
T ss_pred             ccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHhc-CCc------CCCccc--c
Confidence                 235567899996433  467899999999999999999999754322 11111111 000      000000  0


Q ss_pred             HHHHHHHHHHHccCCCCCCCCChHHHHHHHh
Q 021659          263 ELKKLLAVARLCIKTKDKPTISIPQISRYLQ  293 (309)
Q Consensus       263 ~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~  293 (309)
                      ....+.+++.+||+.+|+.|||+.++.+.|+
T Consensus       226 ~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~  256 (265)
T cd05579         226 VSDEAIDLISKLLVPDPEKRLGAKSIEEIKN  256 (265)
T ss_pred             CCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence            1345566777999999999999966665554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=8.9e-34  Score=243.27  Aligned_cols=234  Identities=21%  Similarity=0.286  Sum_probs=185.3

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccc-cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL-EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~-~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      +.||+|++|.||++... ++..+++|.+..... ..+.+.+|++.+++++|+|++++++++.. ...++++||+++++|.
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~   85 (253)
T cd05122           6 EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLK   85 (253)
T ss_pred             eeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcHH
Confidence            57999999999999975 688899999865443 45678999999999999999999997654 6778999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc------cCCCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN------YATMP  194 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~------~~~~~  194 (309)
                      +++... ...+++..+..++.+++.||.+|   |..+++||||+|+||+++.++.++|+|||.+.....      ..++.
T Consensus        86 ~~~~~~-~~~~~~~~~~~i~~~i~~~l~~l---h~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~  161 (253)
T cd05122          86 DLLKST-NQTLTESQIAYVCKELLKGLEYL---HSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTP  161 (253)
T ss_pred             HHHhhc-CCCCCHHHHHHHHHHHHHHHHHh---hcCCEecCCCCHHHEEEccCCeEEEeeccccccccccccccceecCC
Confidence            998763 25789999999999999999999   778999999999999999999999999998865432      34567


Q ss_pred             CCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHH
Q 021659          195 HSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVAR  272 (309)
Q Consensus       195 ~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~  272 (309)
                      .|.+||....  .+.++|+||||+++++|++|+.||..............  ....     .+....  .....+.+++.
T Consensus       162 ~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~-----~~~~~~--~~~~~~~~~i~  232 (253)
T cd05122         162 YWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT--NGPP-----GLRNPE--KWSDEFKDFLK  232 (253)
T ss_pred             cccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh--cCCC-----CcCccc--ccCHHHHHHHH
Confidence            8999996543  46789999999999999999999976533222211111  1111     111111  01245666777


Q ss_pred             HccCCCCCCCCChHHHHH
Q 021659          273 LCIKTKDKPTISIPQISR  290 (309)
Q Consensus       273 ~cl~~dp~~Rps~~evl~  290 (309)
                      +||..||++|||+.+++.
T Consensus       233 ~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         233 KCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             HHccCChhhCCCHHHHhc
Confidence            999999999999999875

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.8e-34  Score=246.28  Aligned_cols=236  Identities=14%  Similarity=0.128  Sum_probs=176.9

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccccc----HHHHHHHHHHH-ccCCCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLE----KDAFYREIQLL-GRLHHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~----~~~~~~ei~~l-~~l~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      +.||+|++|.||+|.. .+++.||+|.+......    ...+..|...+ ...+|+|++++++++.. ...++|+||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            4689999999999986 45789999998543321    12344454444 45589999999997765 678899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---ccCCC
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---NYATM  193 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---~~~~~  193 (309)
                      ++|.+++..  ...+++..+..++.|++.||.||   |+.+++|+||+|+||+++.++.++|+|||++....   ...++
T Consensus        82 ~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~l---H~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  156 (260)
T cd05611          82 GDCASLIKT--LGGLPEDWAKQYIAEVVLGVEDL---HQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGT  156 (260)
T ss_pred             CCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEECCCCcEEEeecccceeccccccCCCC
Confidence            999999976  46789999999999999999999   77899999999999999999999999999876432   33567


Q ss_pred             CCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHH
Q 021659          194 PHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVA  271 (309)
Q Consensus       194 ~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~  271 (309)
                      ..|.+||...+  .+.++||||||+++++|++|..||........ ...... ... . ..+..    .......+.+++
T Consensus       157 ~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~-~~~-~-~~~~~----~~~~~~~~~~~i  228 (260)
T cd05611         157 PDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAV-FDNILS-RRI-N-WPEEV----KEFCSPEAVDLI  228 (260)
T ss_pred             cCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHh-ccc-C-CCCcc----cccCCHHHHHHH
Confidence            88999997533  47889999999999999999999975543221 111110 000 0 00111    111234566777


Q ss_pred             HHccCCCCCCCCChHHHHHHH
Q 021659          272 RLCIKTKDKPTISIPQISRYL  292 (309)
Q Consensus       272 ~~cl~~dp~~Rps~~evl~~L  292 (309)
                      .+||..+|+.||++.++.+.|
T Consensus       229 ~~~l~~~p~~R~~~~~~~~~l  249 (260)
T cd05611         229 NRLLCMDPAKRLGANGYQEIK  249 (260)
T ss_pred             HHHccCCHHHccCCCcHHHHH
Confidence            799999999999876555443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=4.5e-34  Score=258.63  Aligned_cols=243  Identities=16%  Similarity=0.215  Sum_probs=181.2

Q ss_pred             cccc--cccccCCCceEEEEEE-cCCcEEEEEEecccc---ccHHHHHHHHHHHccCCCCCcceEeeeEeC-------Ce
Q 021659           40 DGFH--RIVYTNSHGAAYKARF-QDGEVALVKEIQALN---LEKDAFYREIQLLGRLHHRHLLALQGFSTG-------RK  106 (309)
Q Consensus        40 ~~~~--~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~---~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-------~~  106 (309)
                      +.|.  +.||+|++|.||++.. .+++.||+|.+....   ...+.+.+|+.++++++|+||+++++++..       ..
T Consensus        16 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   95 (353)
T cd07850          16 KRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQD   95 (353)
T ss_pred             cceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCc
Confidence            4454  6899999999999996 468899999885322   223467789999999999999999997642       24


Q ss_pred             eEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccc
Q 021659          107 RLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNS  186 (309)
Q Consensus       107 ~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~  186 (309)
                      .|+||||+.+ +|.+.+..    .++...+..++.|++.||.||   |..+++|+||||+||+++.++.+||+|||++..
T Consensus        96 ~~lv~e~~~~-~l~~~~~~----~l~~~~~~~~~~ql~~aL~~L---H~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~  167 (353)
T cd07850          96 VYLVMELMDA-NLCQVIQM----DLDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLART  167 (353)
T ss_pred             EEEEEeccCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHEEECCCCCEEEccCcccee
Confidence            6899999975 88888764    288999999999999999999   778999999999999999999999999999875


Q ss_pred             ccc------cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccc-------------
Q 021659          187 VRN------YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISS-------------  245 (309)
Q Consensus       187 ~~~------~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~-------------  245 (309)
                      ...      ..++..|++||...  ..+.++||||||+++++|++|+.||........+.......+             
T Consensus       168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (353)
T cd07850         168 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPT  247 (353)
T ss_pred             CCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhh
Confidence            432      24567899999643  347889999999999999999999976543322211100000             


Q ss_pred             --------------cccccccCcC----CCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          246 --------------SIHRMIDPDL----GGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       246 --------------~~~~~~~~~l----~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                                    ..........    ...........+.+++.+||+.||++|||+.|++.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~  310 (353)
T cd07850         248 VRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ  310 (353)
T ss_pred             hhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence                          0000000000    00001122445667777999999999999999984

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=7.7e-34  Score=252.23  Aligned_cols=233  Identities=21%  Similarity=0.252  Sum_probs=180.8

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccc----cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL----EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~----~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|++|.||+|... +++.|++|.+.....    ..+.+.+|+++++.++|||++++.+++.+ ...++|+||+.+ 
T Consensus        21 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~g-   99 (307)
T cd06607          21 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCLG-   99 (307)
T ss_pred             eeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhCC-
Confidence            57999999999999964 688999998853221    22468899999999999999999997765 677899999975 


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---ccCCCC
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---NYATMP  194 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---~~~~~~  194 (309)
                      ++.+.+... ...+++..+..++.|++.||.||   |+.+++|+||+|+||+++.++.++|+|||++....   ...++.
T Consensus       100 ~l~~~~~~~-~~~l~~~~~~~~~~ql~~~L~~L---H~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~~~~~  175 (307)
T cd06607         100 SASDILEVH-KKPLQEVEIAAICHGALQGLAYL---HSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFVGTP  175 (307)
T ss_pred             CHHHHHHHc-ccCCCHHHHHHHHHHHHHHHHHH---HHCCceecCCCcccEEECCCCCEEEeecCcceecCCCCCccCCc
Confidence            777766532 35689999999999999999999   78899999999999999999999999999886443   235677


Q ss_pred             CCCCCCCC-----CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHH
Q 021659          195 HSSCPEDC-----STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLA  269 (309)
Q Consensus       195 ~~~~PE~~-----~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~  269 (309)
                      .|++||..     ...+.++||||||+++|+|++|+.||........... ... ..     .+.+..   ......+..
T Consensus       176 ~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~-~~~-~~-----~~~~~~---~~~~~~~~~  245 (307)
T cd06607         176 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH-IAQ-ND-----SPTLSS---NDWSDYFRN  245 (307)
T ss_pred             cccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHH-Hhc-CC-----CCCCCc---hhhCHHHHH
Confidence            89999964     2346789999999999999999999876543222111 110 00     111111   112345667


Q ss_pred             HHHHccCCCCCCCCChHHHHHH
Q 021659          270 VARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       270 l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      ++.+||..+|+.||++.+++..
T Consensus       246 li~~~l~~~p~~Rp~~~~il~~  267 (307)
T cd06607         246 FVDSCLQKIPQDRPSSEELLKH  267 (307)
T ss_pred             HHHHHhcCChhhCcCHHHHhcC
Confidence            7779999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=4.3e-35  Score=242.52  Aligned_cols=234  Identities=19%  Similarity=0.231  Sum_probs=184.4

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccccc-----H----HHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEE
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLE-----K----DAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVF  111 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~-----~----~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~  111 (309)
                      +.+|.|..+.|-++.. +.|...|+|++......     .    +.-..|+.+|+++ .||+|+.+.+++.. ...++|+
T Consensus        23 eilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVF  102 (411)
T KOG0599|consen   23 EILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFVFLVF  102 (411)
T ss_pred             HHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhhh
Confidence            5799999999888875 56788899988532211     1    2346799999999 59999999998765 5667999


Q ss_pred             eeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---
Q 021659          112 DNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---  188 (309)
Q Consensus       112 e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---  188 (309)
                      +.|+.|-|.|++..  ..++++.+..+++.|+..|++||   |.++|+||||||.|||++++-++||+|||+++...   
T Consensus       103 dl~prGELFDyLts--~VtlSEK~tR~iMrqlfegVeyl---Ha~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~Ge  177 (411)
T KOG0599|consen  103 DLMPRGELFDYLTS--KVTLSEKETRRIMRQLFEGVEYL---HARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGE  177 (411)
T ss_pred             hhcccchHHHHhhh--heeecHHHHHHHHHHHHHHHHHH---HHhhhhhcccChhheeeccccceEEeccceeeccCCch
Confidence            99999999999987  78999999999999999999999   88999999999999999999999999999997654   


Q ss_pred             ---ccCCCCCCCCCCCC--------CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCC
Q 021659          189 ---NYATMPHSSCPEDC--------STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGG  257 (309)
Q Consensus       189 ---~~~~~~~~~~PE~~--------~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  257 (309)
                         .-.|||+|.|||..        .+++...|.|++|+++|.|+.|.+||-....+.-.  .+...++. +     ..+
T Consensus       178 kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlML--R~ImeGky-q-----F~s  249 (411)
T KOG0599|consen  178 KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLML--RMIMEGKY-Q-----FRS  249 (411)
T ss_pred             hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHH--HHHHhccc-c-----cCC
Confidence               44899999999953        33456799999999999999999999654433211  11111211 0     111


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          258 SYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       258 ~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ..+.+......+++.+||+.||..|.|+.|.++
T Consensus       250 peWadis~~~KdLIsrlLqVdp~~Ritake~La  282 (411)
T KOG0599|consen  250 PEWADISATVKDLISRLLQVDPTKRITAKEALA  282 (411)
T ss_pred             cchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence            112333445556666999999999999999884

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=5.6e-34  Score=253.69  Aligned_cols=236  Identities=17%  Similarity=0.157  Sum_probs=175.6

Q ss_pred             CCceEEEEEE-cCCcEEEEEEeccc---cccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHHHhhc
Q 021659           50 SHGAAYKARF-QDGEVALVKEIQAL---NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLKEHLN  124 (309)
Q Consensus        50 ~~~~v~~~~~-~~~~~va~K~~~~~---~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~~~i~  124 (309)
                      +.+.||.++. .+++.||+|++...   ....+.+.+|+++++.++|+||+++++++.+ ...+++|||+++++|.+++.
T Consensus        12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~   91 (314)
T cd08216          12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLK   91 (314)
T ss_pred             CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHH
Confidence            3344555553 26889999998543   2234578999999999999999999996654 67789999999999999997


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc--------------cc
Q 021659          125 DPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR--------------NY  190 (309)
Q Consensus       125 ~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~--------------~~  190 (309)
                      ......+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++.++++|||.+....              ..
T Consensus        92 ~~~~~~~~~~~~~~~~~~l~~~L~~L---H~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~  168 (314)
T cd08216          92 THFPEGLPELAIAFILKDVLNALDYI---HSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSS  168 (314)
T ss_pred             HhcccCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccc
Confidence            64445688999999999999999999   77899999999999999999999999999774221              12


Q ss_pred             CCCCCCCCCCCCC----CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccc---------------
Q 021659          191 ATMPHSSCPEDCS----TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMI---------------  251 (309)
Q Consensus       191 ~~~~~~~~PE~~~----~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~---------------  251 (309)
                      .++..|.+||...    ..+.++|+||||+++++|++|+.||................  ...++               
T Consensus       169 ~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  246 (314)
T cd08216         169 VKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGT--VPCLLDKSTYPLYEDSMSQS  246 (314)
T ss_pred             cccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc--CccccccCchhhhcCCcCcc
Confidence            3556799999643    35788999999999999999999998654333222211100  00000               


Q ss_pred             -----cCcCC----CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          252 -----DPDLG----GSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       252 -----~~~l~----~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                           ++...    ..........+.+++.+||..||++|||+.++++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~  294 (314)
T cd08216         247 RSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN  294 (314)
T ss_pred             cccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence                 00000    0111122356777888999999999999999985

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=5.4e-34  Score=249.62  Aligned_cols=243  Identities=20%  Similarity=0.195  Sum_probs=178.9

Q ss_pred             cccccccCCCceEEEEEE-cCCcEEEEEEecccc--ccHHHHHHHHHHHccCC-CCCcceEeeeEeC---CeeEEEEeeC
Q 021659           42 FHRIVYTNSHGAAYKARF-QDGEVALVKEIQALN--LEKDAFYREIQLLGRLH-HRHLLALQGFSTG---RKRLLVFDNI  114 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~-h~niv~~~~~~~~---~~~~lv~e~~  114 (309)
                      +.+.||+|++|.||++.. .++..+|+|.+....  .......+|+..+.++. |+|++++++++.+   ...++|+||+
T Consensus         3 ~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~   82 (282)
T cd07831           3 ILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELM   82 (282)
T ss_pred             eEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecC
Confidence            346799999999999996 468899999885432  22234567899999885 9999999997653   5678999999


Q ss_pred             CCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------
Q 021659          115 ENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------  188 (309)
Q Consensus       115 ~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------  188 (309)
                      ++ +|.+.+... ...+++..+..++.+++.||.||   |+.+++|+||+|+||+++. +.+||+|||++....      
T Consensus        83 ~~-~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~L---H~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~  156 (282)
T cd07831          83 DM-NLYELIKGR-KRPLPEKRVKSYMYQLLKSLDHM---HRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYT  156 (282)
T ss_pred             Cc-cHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHH---HHCCceecccCHHHEEEcC-CCeEEEecccccccccCCCcC
Confidence            75 787777642 35789999999999999999999   7789999999999999999 999999999986542      


Q ss_pred             ccCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHH--HHHHhccc--c---------ccccccc
Q 021659          189 NYATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQ--WIQESSIS--S---------SIHRMID  252 (309)
Q Consensus       189 ~~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~--~~~~~~~~--~---------~~~~~~~  252 (309)
                      ...++..|++||...   ..+.++||||||+++++|++|+.||.+......  ........  .         .......
T Consensus       157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (282)
T cd07831         157 EYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNF  236 (282)
T ss_pred             CCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccC
Confidence            224567899999542   247889999999999999999999976543221  11110000  0         0000000


Q ss_pred             Cc-CCC---CCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          253 PD-LGG---SYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       253 ~~-l~~---~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      +. ...   .........+.+++.+||.++|++||++.+++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         237 PSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             cccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence            00 000   000122467778888999999999999999985

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=6.1e-34  Score=251.33  Aligned_cols=233  Identities=19%  Similarity=0.255  Sum_probs=181.9

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccc-cccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQAL-NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~-~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      +.||+|+||.||++.. .++..+++|.+... ....+.+.+|+.++++++|||++++++.+.. ...++|+||+++++|.
T Consensus        25 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~  104 (293)
T cd06647          25 EKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLT  104 (293)
T ss_pred             eEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCCcHH
Confidence            6799999999999986 45788999988532 2334678899999999999999999997654 6788999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccCCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYATM  193 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~~~  193 (309)
                      +++..   ..+++..+..++.+++.||.+|   |+.+++|+||+|+||+++.++.++|+|||++....       ...++
T Consensus       105 ~~~~~---~~l~~~~~~~i~~~l~~al~~L---H~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~  178 (293)
T cd06647         105 DVVTE---TCMDEGQIAAVCRECLQALEFL---HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGT  178 (293)
T ss_pred             HHHhh---cCCCHHHHHHHHHHHHHHHHHH---HhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccccccccccCC
Confidence            99875   4588999999999999999999   78899999999999999999999999999875332       22456


Q ss_pred             CCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHH
Q 021659          194 PHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVA  271 (309)
Q Consensus       194 ~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~  271 (309)
                      ..|++||....  .+.++|+||||++++++++|+.||........... ....+      .+...  ........+.+++
T Consensus       179 ~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~-~~~~~------~~~~~--~~~~~~~~l~~li  249 (293)
T cd06647         179 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-IATNG------TPELQ--NPEKLSAIFRDFL  249 (293)
T ss_pred             hhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheee-hhcCC------CCCCC--CccccCHHHHHHH
Confidence            77999997533  46789999999999999999999976543221110 00000      01110  1111233455666


Q ss_pred             HHccCCCCCCCCChHHHHHH
Q 021659          272 RLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       272 ~~cl~~dp~~Rps~~evl~~  291 (309)
                      .+||..+|++||++.+++..
T Consensus       250 ~~~l~~~p~~Rp~~~~il~h  269 (293)
T cd06647         250 NRCLEMDVEKRGSAKELLQH  269 (293)
T ss_pred             HHHccCChhhCcCHHHHhcC
Confidence            79999999999999999854

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.2e-34  Score=247.77  Aligned_cols=232  Identities=18%  Similarity=0.207  Sum_probs=180.3

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEecccc------ccHHHHHHHHHHHccCCCCCcceEeeeEeC---CeeEEEEe
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQALN------LEKDAFYREIQLLGRLHHRHLLALQGFSTG---RKRLLVFD  112 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~------~~~~~~~~ei~~l~~l~h~niv~~~~~~~~---~~~~lv~e  112 (309)
                      .+.||+|++|.||++.. .++..|++|.+....      .....+.+|++++++++|+||+++++++.+   ...++++|
T Consensus         7 ~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e   86 (264)
T cd06653           7 GKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVE   86 (264)
T ss_pred             eeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEE
Confidence            46899999999999996 458899999874221      123468899999999999999999997654   35679999


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc----
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----  188 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----  188 (309)
                      |+++++|.+++..  ...+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++.++|+|||++....    
T Consensus        87 ~~~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~al~~L---H~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~  161 (264)
T cd06653          87 YMPGGSIKDQLKA--YGALTENVTRRYTRQILQGVSYL---HSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICM  161 (264)
T ss_pred             eCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHEEEcCCCCEEECccccccccccccc
Confidence            9999999999875  45688999999999999999999   78899999999999999999999999999886432    


Q ss_pred             ------ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCC
Q 021659          189 ------NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYD  260 (309)
Q Consensus       189 ------~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  260 (309)
                            ...++..|.+||....  .+.++|+||||+++++|++|+.||............. ... .    .+.++.   
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~-~----~~~~p~---  232 (264)
T cd06653         162 SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIA-TQP-T----KPMLPD---  232 (264)
T ss_pred             cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHH-cCC-C----CCCCCc---
Confidence                  1246678999997543  4688999999999999999999997654333222211 111 0    111111   


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          261 SKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       261 ~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                       .....+.+++.+||. +|+.||++.+++.
T Consensus       233 -~~~~~~~~~i~~~l~-~~~~r~~~~~~~~  260 (264)
T cd06653         233 -GVSDACRDFLKQIFV-EEKRRPTAEFLLR  260 (264)
T ss_pred             -ccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence             123445566669999 5799999998875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=5e-36  Score=290.09  Aligned_cols=231  Identities=22%  Similarity=0.282  Sum_probs=184.6

Q ss_pred             ccccCCCceEEEEEE-cCCcEEEEEEeccccccH---HHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCH
Q 021659           45 IVYTNSHGAAYKARF-QDGEVALVKEIQALNLEK---DAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSL  119 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~---~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL  119 (309)
                      .||.|.||.||.+.. ..|+..|+|.+.-.....   ..+.+|+.+|..|+|||+++++|+-. +...++.||||++|+|
T Consensus      1242 ~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~GsL 1321 (1509)
T KOG4645|consen 1242 FIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGSL 1321 (1509)
T ss_pred             ccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccCcH
Confidence            799999999999995 568999999885333322   45788999999999999999999754 4677899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-----------
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-----------  188 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-----------  188 (309)
                      .+.+.-  +...++..-.-+..|++.|++||   |+.||+||||||.||+++.+|.+|++|||.|....           
T Consensus      1322 a~ll~~--gri~dE~vt~vyt~qll~gla~L---H~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~ 1396 (1509)
T KOG4645|consen 1322 ASLLEH--GRIEDEMVTRVYTKQLLEGLAYL---HEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQ 1396 (1509)
T ss_pred             HHHHHh--cchhhhhHHHHHHHHHHHHHHHH---HhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHH
Confidence            999875  44455555566889999999999   88899999999999999999999999999987553           


Q ss_pred             ccCCCCCCCCCCCCCC-----CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHH
Q 021659          189 NYATMPHSSCPEDCST-----QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKE  263 (309)
Q Consensus       189 ~~~~~~~~~~PE~~~~-----~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  263 (309)
                      ...||+.|+|||...+     ...++|||||||++.||+||+.||...++-.+-+.+..... .     |.++.. -+.+
T Consensus      1397 ~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh-~-----Pq~P~~-ls~~ 1469 (1509)
T KOG4645|consen 1397 SMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGH-K-----PQIPER-LSSE 1469 (1509)
T ss_pred             hhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccC-C-----CCCchh-hhHh
Confidence            3479999999997543     35789999999999999999999986655544444332221 1     333322 3445


Q ss_pred             HHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          264 LKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       264 ~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .+++++   +||+.||+.|-++.|+++
T Consensus      1470 g~dFle---~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1470 GRDFLE---HCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred             HHHHHH---HHHhcCchhhhHHHHHHH
Confidence            666666   999999999988877764

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=3.6e-34  Score=252.62  Aligned_cols=243  Identities=16%  Similarity=0.205  Sum_probs=180.0

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~s  118 (309)
                      +.||+|++|.||+|... +++.|++|.+.....   ..+.+.+|++++++++||||+++++++.+ ...++||||+++ +
T Consensus         8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~   86 (294)
T PLN00009          8 EKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDL-D   86 (294)
T ss_pred             EEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEecccc-c
Confidence            57999999999999974 688999998854322   23568899999999999999999997755 678899999965 8


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC-CCceeEeccccccccc-------cc
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE-NFTAKLSDVGFFNSVR-------NY  190 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~-~~~~kl~dfg~~~~~~-------~~  190 (309)
                      |.+.+.......+++..+..++.+++.||.||   |+++++|+||+|+||+++. ++.+|++|||++....       ..
T Consensus        87 l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~L---H~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~~~  163 (294)
T PLN00009         87 LKKHMDSSPDFAKNPRLIKTYLYQILRGIAYC---HSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHE  163 (294)
T ss_pred             HHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCccccccC
Confidence            88877654445578888999999999999999   7789999999999999985 5679999999886432       22


Q ss_pred             CCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcc-ccccc----------cccc--Cc
Q 021659          191 ATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSI-SSSIH----------RMID--PD  254 (309)
Q Consensus       191 ~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~-~~~~~----------~~~~--~~  254 (309)
                      .++..|++||...+   .+.++||||||+++++|+||..||............... .....          ....  +.
T Consensus       164 ~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (294)
T PLN00009        164 VVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPK  243 (294)
T ss_pred             ceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhccc
Confidence            45678999996432   367899999999999999999999765443322211100 00000          0000  00


Q ss_pred             CCC----CCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          255 LGG----SYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       255 l~~----~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ...    .........+.+++.+|++.+|+.||++.+++.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        244 WPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             CCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence            000    000111345667888999999999999999885

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=3.8e-34  Score=248.88  Aligned_cols=233  Identities=16%  Similarity=0.182  Sum_probs=186.5

Q ss_pred             cccccCCCceEEEEEEcC-CcEEEEEEeccccccH----HHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQD-GEVALVKEIQALNLEK----DAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~-~~~va~K~~~~~~~~~----~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~  117 (309)
                      ++||+|.-|+||+++..+ +...|+|++.+.....    .+...|-++|+.+.||.++.+|..+. +...+++||||+||
T Consensus        83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGG  162 (459)
T KOG0610|consen   83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGG  162 (459)
T ss_pred             HHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCc
Confidence            579999999999999865 5899999996654442    35678999999999999999999665 56778999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc----------
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV----------  187 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~----------  187 (309)
                      +|..+.+...+..|++..+..++.+++-||+||   |-.|||.|||||+||||.++|++-|+||.++...          
T Consensus       163 dL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYL---HmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~  239 (459)
T KOG0610|consen  163 DLHSLRQKQPGKRFSESAARFYAAEVLLALEYL---HMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSS  239 (459)
T ss_pred             cHHHHHhhCCCCccchhhHHHHHHHHHHHHHHH---HhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccC
Confidence            999999988889999999999999999999999   7789999999999999999999999999875200          


Q ss_pred             ---------------------------c--------------------------ccCCCCCCCCCCCCCCC--CCCCcEe
Q 021659          188 ---------------------------R--------------------------NYATMPHSSCPEDCSTQ--DCSNIIF  212 (309)
Q Consensus       188 ---------------------------~--------------------------~~~~~~~~~~PE~~~~~--~~~~Dv~  212 (309)
                                                 .                          ..+||-.|.|||...+.  +.+.|=|
T Consensus       240 ~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWW  319 (459)
T KOG0610|consen  240 SPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWW  319 (459)
T ss_pred             CCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHH
Confidence                                       0                          12456678999986654  7899999


Q ss_pred             ehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCC----hHHH
Q 021659          213 QLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTIS----IPQI  288 (309)
Q Consensus       213 slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps----~~ev  288 (309)
                      +||+++|||+.|.-||++...-.....-..          ..+.....+.....+.+||.+.|.+||..|..    +.||
T Consensus       320 tfGIflYEmLyG~TPFKG~~~~~Tl~NIv~----------~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eI  389 (459)
T KOG0610|consen  320 TFGIFLYEMLYGTTPFKGSNNKETLRNIVG----------QPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEI  389 (459)
T ss_pred             HHHHHHHHHHhCCCCcCCCCchhhHHHHhc----------CCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHh
Confidence            999999999999999998755443333222          22221112222344555666999999999998    6666


Q ss_pred             H
Q 021659          289 S  289 (309)
Q Consensus       289 l  289 (309)
                      -
T Consensus       390 K  390 (459)
T KOG0610|consen  390 K  390 (459)
T ss_pred             h
Confidence            4

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=7e-34  Score=250.64  Aligned_cols=242  Identities=15%  Similarity=0.196  Sum_probs=180.4

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccccc---HHHHHHHHHHHccCCCCCcceEeeeEe-C--CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLE---KDAFYREIQLLGRLHHRHLLALQGFST-G--RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~h~niv~~~~~~~-~--~~~~lv~e~~~~  116 (309)
                      +.||.|++|.||+|... +++.+++|.+......   ...+.+|++++++++||||+++++++. +  ...++|+||+.+
T Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~~   90 (293)
T cd07843          11 NRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVEH   90 (293)
T ss_pred             hhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcCc
Confidence            57999999999999975 5788999998543322   235678999999999999999999764 3  578899999975


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------  189 (309)
                       +|.+++... ...+++..+..++.|++.||+||   |+.+++|+||+|+||+++.++.++|+|||++.....       
T Consensus        91 -~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~L---H~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~  165 (293)
T cd07843          91 -DLKSLMETM-KQPFLQSEVKCLMLQLLSGVAHL---HDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPYTQ  165 (293)
T ss_pred             -CHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCcccccc
Confidence             999888653 24689999999999999999999   778999999999999999999999999998764432       


Q ss_pred             cCCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHH--Hhcc---------------c--ccc
Q 021659          190 YATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQ--ESSI---------------S--SSI  247 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~--~~~~---------------~--~~~  247 (309)
                      ..++..|++||...+   .+.++|+||||+++++|++|..||...........  ....               .  ...
T Consensus       166 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (293)
T cd07843         166 LVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTF  245 (293)
T ss_pred             ccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhccccc
Confidence            245677999997533   36789999999999999999999975543221110  0000               0  000


Q ss_pred             cccccCcCCCCCCHH-HHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          248 HRMIDPDLGGSYDSK-ELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       248 ~~~~~~~l~~~~~~~-~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .......+...+... ....+.+++.+||+.+|++|||+.|++.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~  289 (293)
T cd07843         246 TKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK  289 (293)
T ss_pred             ccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence            000000111111111 2345566777999999999999999985

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=7.2e-34  Score=253.60  Aligned_cols=235  Identities=21%  Similarity=0.250  Sum_probs=181.3

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc----cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL----EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~----~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||+++. .++..+++|.+.....    ....+.+|++++++++|+|++++++++.+ ...++||||+.+ 
T Consensus        31 ~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g-  109 (317)
T cd06635          31 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCLG-  109 (317)
T ss_pred             heeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCCC-
Confidence            5799999999999996 4678999998853321    12468889999999999999999997754 677899999975 


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---ccCCCC
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---NYATMP  194 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---~~~~~~  194 (309)
                      +|.+.+... ...+++..+..++.+++.|+.||   |+.+++|+||+|+||+++.++.++|+|||++....   ...++.
T Consensus       110 ~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~l---H~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  185 (317)
T cd06635         110 SASDLLEVH-KKPLQEVEIAAITHGALQGLAYL---HSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGTP  185 (317)
T ss_pred             CHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCcccEEECCCCCEEEecCCCccccCCcccccCCc
Confidence            777776432 45689999999999999999999   78899999999999999999999999999876443   235677


Q ss_pred             CCCCCCCC-----CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHH
Q 021659          195 HSSCPEDC-----STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLA  269 (309)
Q Consensus       195 ~~~~PE~~-----~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~  269 (309)
                      .|.+||..     ...+.++||||||+++++|++|+.||............. ....      +......   ....+.+
T Consensus       186 ~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~-~~~~------~~~~~~~---~~~~l~~  255 (317)
T cd06635         186 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA-QNES------PTLQSNE---WSDYFRN  255 (317)
T ss_pred             cccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH-hccC------CCCCCcc---ccHHHHH
Confidence            89999974     234788999999999999999999987543222211111 1100      1111111   2234566


Q ss_pred             HHHHccCCCCCCCCChHHHHHHHh
Q 021659          270 VARLCIKTKDKPTISIPQISRYLQ  293 (309)
Q Consensus       270 l~~~cl~~dp~~Rps~~evl~~L~  293 (309)
                      ++.+||+.+|.+||++.++++.+.
T Consensus       256 li~~~l~~~p~~Rpt~~~il~~~~  279 (317)
T cd06635         256 FVDSCLQKIPQDRPTSEELLKHMF  279 (317)
T ss_pred             HHHHHccCCcccCcCHHHHHhChh
Confidence            666999999999999999997543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=100.00  E-value=3.4e-34  Score=257.53  Aligned_cols=242  Identities=16%  Similarity=0.183  Sum_probs=182.1

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccccH---------------HHHHHHHHHHccCCCCCcceEeeeEeC-Ce
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLEK---------------DAFYREIQLLGRLHHRHLLALQGFSTG-RK  106 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~~---------------~~~~~ei~~l~~l~h~niv~~~~~~~~-~~  106 (309)
                      +.||.|++|.||++... +++.||+|.+.......               ..+.+|++++++++|+||+++++++.. ..
T Consensus        15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   94 (335)
T PTZ00024         15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGDF   94 (335)
T ss_pred             hcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCCc
Confidence            56999999999999964 68899999885432211               247789999999999999999997654 67


Q ss_pred             eEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccc
Q 021659          107 RLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNS  186 (309)
Q Consensus       107 ~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~  186 (309)
                      .++||||+.+ +|.+++..  ...+++..+..++.|++.||.+|   |+.+++|+||+|+||+++.++.++++|||++..
T Consensus        95 ~~lv~e~~~~-~l~~~l~~--~~~~~~~~~~~~~~ql~~aL~~L---H~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~  168 (335)
T PTZ00024         95 INLVMDIMAS-DLKKVVDR--KIRLTESQVKCILLQILNGLNVL---HKWYFMHRDLSPANIFINSKGICKIADFGLARR  168 (335)
T ss_pred             EEEEEecccc-CHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HhCCeecccccHHHeEECCCCCEEECCccceee
Confidence            7899999974 99999876  56789999999999999999999   788999999999999999999999999998864


Q ss_pred             cc---------------------ccCCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHH--H
Q 021659          187 VR---------------------NYATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQ--E  240 (309)
Q Consensus       187 ~~---------------------~~~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~--~  240 (309)
                      ..                     ...++..|.+||...+   .+.++|+||||+++++|++|+.||...........  .
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~  248 (335)
T PTZ00024        169 YGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFE  248 (335)
T ss_pred             cccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            43                     1234567999997543   36789999999999999999999986654332211  1


Q ss_pred             hccccc---ccccc--------cCcCCCC---CCHHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          241 SSISSS---IHRMI--------DPDLGGS---YDSKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       241 ~~~~~~---~~~~~--------~~~l~~~---~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      ......   .+...        .+.....   ........+.+++.+||+.+|++|||+.|++..
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~  313 (335)
T PTZ00024        249 LLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH  313 (335)
T ss_pred             HhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence            110000   00000        0000000   001123456677889999999999999999953

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=9.7e-34  Score=251.31  Aligned_cols=242  Identities=17%  Similarity=0.163  Sum_probs=177.8

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC---------CeeEEE
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG---------RKRLLV  110 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~---------~~~~lv  110 (309)
                      +.||+|++|.||++... +++.||+|.+.....   ....+.+|++++++++||||+++++++..         ...++|
T Consensus        18 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv   97 (310)
T cd07865          18 AKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLV   97 (310)
T ss_pred             EEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEEE
Confidence            68999999999999974 588999998843221   23356789999999999999999997643         234899


Q ss_pred             EeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-
Q 021659          111 FDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-  189 (309)
Q Consensus       111 ~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-  189 (309)
                      +||+.+ +|.+.+... ...+++.++..++.|++.||.||   |+.+++|+||+|+||+++.++.+||+|||++..... 
T Consensus        98 ~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~al~~l---H~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~  172 (310)
T cd07865          98 FEFCEH-DLAGLLSNK-NVKFTLSEIKKVMKMLLNGLYYI---HRNKILHRDMKAANILITKDGILKLADFGLARAFSLS  172 (310)
T ss_pred             EcCCCc-CHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHEEECCCCcEEECcCCCcccccCC
Confidence            999975 888877642 34689999999999999999999   777999999999999999999999999998864421 


Q ss_pred             ----------cCCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCc--
Q 021659          190 ----------YATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPD--  254 (309)
Q Consensus       190 ----------~~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--  254 (309)
                                ..++..|+|||...+   .+.++||||||+++|+|++|..||................+..+.-..+.  
T Consensus       173 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (310)
T cd07865         173 KNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVD  252 (310)
T ss_pred             cccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccc
Confidence                      234567999996432   46789999999999999999999976543322111111001000000000  


Q ss_pred             ---------CCCCC---------CHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          255 ---------LGGSY---------DSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       255 ---------l~~~~---------~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                               .....         .......+.+++.+||..||++|||+.|+++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~  306 (310)
T cd07865         253 KLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN  306 (310)
T ss_pred             chhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence                     00000         0001234567788999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=5.1e-34  Score=251.56  Aligned_cols=243  Identities=17%  Similarity=0.162  Sum_probs=179.9

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccc---cHHHHHHHHHHHccCC-CCCcceEeeeEeC-Ce-----eEEEEe
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL---EKDAFYREIQLLGRLH-HRHLLALQGFSTG-RK-----RLLVFD  112 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~-h~niv~~~~~~~~-~~-----~~lv~e  112 (309)
                      +.||+|++|.||+|... +++.||+|.+.....   ....+.+|+.++++++ |+||+++++++.. ..     .|++||
T Consensus         7 ~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e   86 (295)
T cd07837           7 EKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFE   86 (295)
T ss_pred             eEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEee
Confidence            57999999999999974 588999998754322   2356888999999995 6999999997643 22     689999


Q ss_pred             eCCCCCHHHhhcCCC---CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC-CCceeEeccccccccc
Q 021659          113 NIENGSLKEHLNDPL---KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE-NFTAKLSDVGFFNSVR  188 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~---~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~-~~~~kl~dfg~~~~~~  188 (309)
                      |+++ +|.+++....   ...+++..+..++.|++.||.||   |+.+++|+||+|+||+++. ++.++|+|||++....
T Consensus        87 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~L---H~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~  162 (295)
T cd07837          87 YLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHC---HKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFS  162 (295)
T ss_pred             ccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCChHHEEEecCCCeEEEeecccceecC
Confidence            9986 8888875421   35689999999999999999999   7889999999999999998 8899999999886432


Q ss_pred             c-------cCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcc--cccc---ccc---
Q 021659          189 N-------YATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSI--SSSI---HRM---  250 (309)
Q Consensus       189 ~-------~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~--~~~~---~~~---  250 (309)
                      .       ..+++.|.+||...   ..+.++|+||||+++|+|++|..||.+.............  ....   ...   
T Consensus       163 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (295)
T cd07837         163 IPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKL  242 (295)
T ss_pred             CCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhc
Confidence            2       23467799999643   2478899999999999999999999876544333211110  0000   000   


Q ss_pred             c----cCcCC----CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          251 I----DPDLG----GSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       251 ~----~~~l~----~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .    -+...    ..........+.+++.+||.+||++||++.|++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         243 RDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT  290 (295)
T ss_pred             cchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            0    00000    0000112345667788999999999999999875

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=6.4e-34  Score=249.45  Aligned_cols=232  Identities=18%  Similarity=0.226  Sum_probs=174.1

Q ss_pred             ccccCCCceEEEEEEc-CCcEEEEEEeccccc----cHHHHHHHHHHHc---cCCCCCcceEeeeEe-CCeeEEEEeeCC
Q 021659           45 IVYTNSHGAAYKARFQ-DGEVALVKEIQALNL----EKDAFYREIQLLG---RLHHRHLLALQGFST-GRKRLLVFDNIE  115 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~----~~~~~~~ei~~l~---~l~h~niv~~~~~~~-~~~~~lv~e~~~  115 (309)
                      .||+|+||.||++... +++.+|+|.+.....    ....+.+|...++   ...|||++.+++.+. ++..++||||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            4899999999999974 588999998854321    1223344444333   346999999998665 467889999999


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-----cc
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-----NY  190 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-----~~  190 (309)
                      +++|.+++..  ...+++..+..++.|++.||.||   |+.+++|+||||+||+++.++.++++|||++....     ..
T Consensus        81 ~~~L~~~i~~--~~~l~~~~~~~i~~qi~~al~~l---H~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~  155 (279)
T cd05633          81 GGDLHYHLSQ--HGVFSEKEMRFYATEIILGLEHM---HNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS  155 (279)
T ss_pred             CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCc
Confidence            9999999876  46799999999999999999999   77899999999999999999999999999875432     23


Q ss_pred             CCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccH-HHHHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          191 ATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDL-IQWIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       191 ~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                      .++..|++||...   ..+.++|+||||+++++|++|..||...... .........      .....++..    ....
T Consensus       156 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~------~~~~~~~~~----~~~~  225 (279)
T cd05633         156 VGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL------TVNVELPDS----FSPE  225 (279)
T ss_pred             CCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhh------cCCcCCccc----cCHH
Confidence            5788999999753   2478899999999999999999999653221 111111110      011112111    1234


Q ss_pred             HHHHHHHccCCCCCCCC-----ChHHHHHH
Q 021659          267 LLAVARLCIKTKDKPTI-----SIPQISRY  291 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rp-----s~~evl~~  291 (309)
                      +.+++.+||..||++||     ++.|+++.
T Consensus       226 ~~~li~~~l~~~p~~R~~~~~~~~~~~~~h  255 (279)
T cd05633         226 LKSLLEGLLQRDVSKRLGCLGRGAQEVKEH  255 (279)
T ss_pred             HHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence            55666699999999999     58888763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=5.1e-34  Score=256.61  Aligned_cols=247  Identities=16%  Similarity=0.195  Sum_probs=183.6

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccc--cccHHHHHHHHHHHccCCCCCcceEeeeEeC------CeeEEEEeeC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQAL--NLEKDAFYREIQLLGRLHHRHLLALQGFSTG------RKRLLVFDNI  114 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~--~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~------~~~~lv~e~~  114 (309)
                      +.||+|++|.||+|.. .++..||+|.+...  ......+.+|+.++++++|+||+++++++..      ...++++||+
T Consensus        11 ~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~   90 (336)
T cd07849          11 SYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELM   90 (336)
T ss_pred             EEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehhc
Confidence            6899999999999986 46889999988532  2234567889999999999999999987543      3468999999


Q ss_pred             CCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------
Q 021659          115 ENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------  188 (309)
Q Consensus       115 ~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------  188 (309)
                      .+ +|.+++..   ..+++..+..++.|++.||.+|   |+.+++|+||+|+||+++.++.++|+|||++....      
T Consensus        91 ~~-~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~L---H~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~  163 (336)
T cd07849          91 ET-DLYKLIKT---QHLSNDHIQYFLYQILRGLKYI---HSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHT  163 (336)
T ss_pred             cc-CHHHHHhc---CCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHEEECCCCCEEECcccceeecccccccc
Confidence            76 88888764   6799999999999999999999   77899999999999999999999999999876432      


Q ss_pred             ----ccCCCCCCCCCCCC---CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHH--Hhc---ccccccccccCc--
Q 021659          189 ----NYATMPHSSCPEDC---STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQ--ESS---ISSSIHRMIDPD--  254 (309)
Q Consensus       189 ----~~~~~~~~~~PE~~---~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~--~~~---~~~~~~~~~~~~--  254 (309)
                          ...++..|+|||..   ...+.++||||||+++++|++|+.||.+.........  ...   ..+....+.+..  
T Consensus       164 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (336)
T cd07849         164 GFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRAR  243 (336)
T ss_pred             CCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhh
Confidence                12457789999963   2357889999999999999999999975432221111  000   000000000000  


Q ss_pred             -----CC--CC-----CCHHHHHHHHHHHHHccCCCCCCCCChHHHHHH--Hhhhhc
Q 021659          255 -----LG--GS-----YDSKELKKLLAVARLCIKTKDKPTISIPQISRY--LQNEVD  297 (309)
Q Consensus       255 -----l~--~~-----~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~--L~~~~~  297 (309)
                           ..  ..     ..+.....+.+++.+||+.+|++|||+.|+++.  ++...+
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~  300 (336)
T cd07849         244 NYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHD  300 (336)
T ss_pred             hHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCC
Confidence                 00  00     001123456778889999999999999999975  665544

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=3.7e-34  Score=257.62  Aligned_cols=248  Identities=15%  Similarity=0.212  Sum_probs=184.6

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccc---cccHHHHHHHHHHHccCCCCCcceEeeeEeC------CeeEEEEee
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQAL---NLEKDAFYREIQLLGRLHHRHLLALQGFSTG------RKRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~---~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~------~~~~lv~e~  113 (309)
                      +.||+|++|.||++.. .++..||+|.+...   ......+.+|+.+++.++|+||+++++++..      ...++++||
T Consensus        11 ~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~   90 (337)
T cd07858          11 KPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYEL   90 (337)
T ss_pred             EEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEeC
Confidence            5899999999999996 46889999988532   2234567789999999999999999997643      246899999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc----
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN----  189 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~----  189 (309)
                      +. ++|.+++..  ...+++..+..++.|++.||.||   |+.+++|+||+|+||+++.++.+||+|||++.....    
T Consensus        91 ~~-~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~L---H~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~  164 (337)
T cd07858          91 MD-TDLHQIIRS--SQTLSDDHCQYFLYQLLRGLKYI---HSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDF  164 (337)
T ss_pred             CC-CCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCccc
Confidence            96 589998876  46799999999999999999999   778999999999999999999999999999865432    


Q ss_pred             ---cCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHH--HHHhcc---cccc--------ccc
Q 021659          190 ---YATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQW--IQESSI---SSSI--------HRM  250 (309)
Q Consensus       190 ---~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~--~~~~~~---~~~~--------~~~  250 (309)
                         ..++..|.+||...   ..+.++|+||||+++++|++|+.||.+.......  ......   ....        ...
T Consensus       165 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (337)
T cd07858         165 MTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRY  244 (337)
T ss_pred             ccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHH
Confidence               24667899999643   3578999999999999999999999754321111  000000   0000        000


Q ss_pred             -------ccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHH--Hhhhhcc
Q 021659          251 -------IDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRY--LQNEVDI  298 (309)
Q Consensus       251 -------~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~--L~~~~~~  298 (309)
                             .++... .........+.+++.+||+.+|++|||+.+++..  +....+.
T Consensus       245 ~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~  300 (337)
T cd07858         245 IRSLPYTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDP  300 (337)
T ss_pred             HHhcCcccccCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCc
Confidence                   000000 0011224556778889999999999999999965  5544333

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=8.8e-34  Score=252.03  Aligned_cols=243  Identities=18%  Similarity=0.197  Sum_probs=180.4

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccccc---HHHHHHHHHHHccCCCCCcceEeeeEeC---CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLE---KDAFYREIQLLGRLHHRHLLALQGFSTG---RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~h~niv~~~~~~~~---~~~~lv~e~~~~  116 (309)
                      +.||+|++|.||+|.. .+++.||+|.+......   ...+.+|++++++++|+||+++++++.+   ...++||||+.+
T Consensus        13 ~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~   92 (309)
T cd07845          13 NRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCEQ   92 (309)
T ss_pred             eeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCCC
Confidence            5799999999999997 45889999998533221   2346789999999999999999997653   457899999975


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------  189 (309)
                       +|.+++... ...+++..+..++.|++.||.||   |+.+++|+||+|+||+++.++.++|+|||.+.....       
T Consensus        93 -~l~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~  167 (309)
T cd07845          93 -DLASLLDNM-PTPFSESQVKCLMLQLLRGLQYL---HENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTP  167 (309)
T ss_pred             -CHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEECCCCCEEECccceeeecCCccCCCCc
Confidence             888887642 36689999999999999999999   788999999999999999999999999998865432       


Q ss_pred             cCCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccc-----cccccc------CcC
Q 021659          190 YATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSS-----IHRMID------PDL  255 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~-----~~~~~~------~~l  255 (309)
                      ...+..|.+||...+   .+.++||||||+++|+|++|+.||................+.     .+.+..      ..+
T Consensus       168 ~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (309)
T cd07845         168 KVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTL  247 (309)
T ss_pred             ccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccc
Confidence            123567999997532   478899999999999999999999765443322111110000     000000      000


Q ss_pred             CCC-C------CHHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          256 GGS-Y------DSKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       256 ~~~-~------~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      ... .      .......+.+++.+||+.||++|||+.+++..
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h  290 (309)
T cd07845         248 PKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES  290 (309)
T ss_pred             cCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            000 0      00013455667779999999999999999853

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=1.4e-33  Score=248.99  Aligned_cols=232  Identities=20%  Similarity=0.283  Sum_probs=180.9

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc-ccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN-LEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~-~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL~  120 (309)
                      ..||+|++|.||++.. .++..||+|.+.... .....+.+|+..++.++|+|++++++++. ....+++|||+++++|.
T Consensus        26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  105 (292)
T cd06657          26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT  105 (292)
T ss_pred             HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence            4699999999999987 468899999885433 23456889999999999999999999665 47888999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------cCCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------YATM  193 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------~~~~  193 (309)
                      +++..   ..+++..+..++.+++.|++||   |+.+++||||+|+||+++.++.++++|||++.....       ..++
T Consensus       106 ~~~~~---~~~~~~~~~~~~~ql~~~l~~l---H~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  179 (292)
T cd06657         106 DIVTH---TRMNEEQIAAVCLAVLKALSVL---HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGT  179 (292)
T ss_pred             HHHhc---CCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccC
Confidence            98754   4689999999999999999999   778999999999999999999999999998754322       2456


Q ss_pred             CCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHH
Q 021659          194 PHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVA  271 (309)
Q Consensus       194 ~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~  271 (309)
                      ..|.+||....  .+.++|+||+|+++++|++|..||.+...... ......      ...+.+...  ......+.+++
T Consensus       180 ~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~-~~~~~~------~~~~~~~~~--~~~~~~l~~li  250 (292)
T cd06657         180 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA-MKMIRD------NLPPKLKNL--HKVSPSLKGFL  250 (292)
T ss_pred             ccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHh------hCCcccCCc--ccCCHHHHHHH
Confidence            78999997543  36789999999999999999999976533211 111100      001111110  01123455666


Q ss_pred             HHccCCCCCCCCChHHHHH
Q 021659          272 RLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       272 ~~cl~~dp~~Rps~~evl~  290 (309)
                      .+||+.+|.+||++.+++.
T Consensus       251 ~~~l~~~P~~R~~~~~ll~  269 (292)
T cd06657         251 DRLLVRDPAQRATAAELLK  269 (292)
T ss_pred             HHHHhCCcccCcCHHHHhc
Confidence            7999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.1e-33  Score=241.80  Aligned_cols=232  Identities=19%  Similarity=0.283  Sum_probs=185.3

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      .+.||+|++|.||++... +++.|++|.+.....   ..+.+.+|++++.+++|+|++++++++.+ ...++++||++++
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~   84 (254)
T cd06627           5 GDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENG   84 (254)
T ss_pred             eeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCC
Confidence            367999999999999864 578899999965543   34678999999999999999999997654 6778999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------c
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------Y  190 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------~  190 (309)
                      +|.+++..  ...+++..+..++.+++.||.+|   |+.+++||||+|+||+++.++.++|+|||.+.....       .
T Consensus        85 ~L~~~~~~--~~~l~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~  159 (254)
T cd06627          85 SLRQIIKK--FGPFPESLVAVYVYQVLQGLAYL---HEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASV  159 (254)
T ss_pred             cHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHH---hhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccccccc
Confidence            99999976  46799999999999999999999   788999999999999999999999999998865432       2


Q ss_pred             CCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHH
Q 021659          191 ATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL  268 (309)
Q Consensus       191 ~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~  268 (309)
                      .++..|.+||....  .+.++|+||||+++++|++|..||..............  ..     .+.+...    ....+.
T Consensus       160 ~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~--~~-----~~~~~~~----~~~~~~  228 (254)
T cd06627         160 VGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQ--DD-----HPPLPEG----ISPELK  228 (254)
T ss_pred             ccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc--cC-----CCCCCCC----CCHHHH
Confidence            45678999996433  46889999999999999999999976543322222111  11     1111111    124555


Q ss_pred             HHHHHccCCCCCCCCChHHHHH
Q 021659          269 AVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       269 ~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      +++.+||..+|++|||+.+++.
T Consensus       229 ~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         229 DFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             HHHHHHHhCChhhCcCHHHHhc
Confidence            6777999999999999999874

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=6.3e-34  Score=249.16  Aligned_cols=242  Identities=17%  Similarity=0.207  Sum_probs=183.5

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~s  118 (309)
                      +.||+|++|.||++... ++..+++|.+.....   ....+.+|++.+++++|+||+++++++.+ ...++++||+++ +
T Consensus         5 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~-~   83 (283)
T cd05118           5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT-D   83 (283)
T ss_pred             eeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC-C
Confidence            57999999999999974 688899998854332   24578889999999999999999996654 678899999976 8


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------cC
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------YA  191 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------~~  191 (309)
                      |.+.+... ...+++..+..++.+++.||.+|   |+.+++|+||+|+||+++.++.++++|||.+.....       ..
T Consensus        84 l~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~L---H~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~  159 (283)
T cd05118          84 LYKLIKDR-QRGLPESLIKSYLYQLLQGLAFC---HSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYV  159 (283)
T ss_pred             HHHHHHhh-cccCCHHHHHHHHHHHHHHHHHH---HHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCcc
Confidence            88887653 25789999999999999999999   778999999999999999999999999998764432       34


Q ss_pred             CCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccc-----cccccccc---------Cc
Q 021659          192 TMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSIS-----SSIHRMID---------PD  254 (309)
Q Consensus       192 ~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~---------~~  254 (309)
                      ++..|.+||...   ..+.++|+||||+++++|++|+.||................     ........         +.
T Consensus       160 ~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (283)
T cd05118         160 VTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPK  239 (283)
T ss_pred             CcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhcc
Confidence            566799999643   34788999999999999999999997654432221111000     00000000         00


Q ss_pred             CC----CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          255 LG----GSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       255 l~----~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ..    ..........+.+++.+||++||.+||++.+++.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         240 KAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             ccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence            00    0011123467778888999999999999999975

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6e-35  Score=265.08  Aligned_cols=233  Identities=18%  Similarity=0.228  Sum_probs=185.3

Q ss_pred             cccccCCCceEEEEEEcC-CcEEEEEEecc-ccccHHHHHHHHHHHccCCCCCcceEee-eEeCCeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARFQD-GEVALVKEIQA-LNLEKDAFYREIQLLGRLHHRHLLALQG-FSTGRKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~-~~~va~K~~~~-~~~~~~~~~~ei~~l~~l~h~niv~~~~-~~~~~~~~lv~e~~~~~sL~  120 (309)
                      ..||-|+||+||++..++ +-..|.|++.- ...+-+.|.-||++|..-.||+|+++++ |+.++..+++.|||.||.++
T Consensus        38 GELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVD  117 (1187)
T KOG0579|consen   38 GELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVD  117 (1187)
T ss_pred             hhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHh
Confidence            468899999999999754 45567788743 3334568899999999999999999999 66778899999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc-------cccCCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-------RNYATM  193 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-------~~~~~~  193 (309)
                      ..+-.- +..+++.++.-++.+++.||.||   |++.|||||||..|||++.+|.++|+|||.+...       ..+.||
T Consensus       118 aimlEL-~r~LtE~QIqvvc~q~ldALn~L---Hs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFIGT  193 (1187)
T KOG0579|consen  118 AIMLEL-GRVLTEDQIQVVCYQVLDALNWL---HSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFIGT  193 (1187)
T ss_pred             HHHHHh-ccccchHHHHHHHHHHHHHHHHH---hhcchhhhhccccceEEEecCcEeeecccccccchhHHhhhccccCC
Confidence            877543 57799999999999999999999   8899999999999999999999999999987432       357899


Q ss_pred             CCCCCCCC-------CCCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCC-CCCCHHHHH
Q 021659          194 PHSSCPED-------CSTQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLG-GSYDSKELK  265 (309)
Q Consensus       194 ~~~~~PE~-------~~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~  265 (309)
                      |.|+|||.       ...+++++||||||++|+||..+.+|-.......-.+... ..+      .|.+. .+.++..+.
T Consensus       194 PYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKia-KSe------PPTLlqPS~Ws~~F~  266 (1187)
T KOG0579|consen  194 PYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA-KSE------PPTLLQPSHWSRSFS  266 (1187)
T ss_pred             cccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHh-hcC------CCcccCcchhhhHHH
Confidence            99999995       2345789999999999999999999976543333333222 211      12222 223343444


Q ss_pred             HHHHHHHHccCCCCCCCCChHHHHH
Q 021659          266 KLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       266 ~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      +   ++.+||..||+.||++.++++
T Consensus       267 D---fLk~cL~Knp~~Rp~aaqll~  288 (1187)
T KOG0579|consen  267 D---FLKRCLVKNPRNRPPAAQLLK  288 (1187)
T ss_pred             H---HHHHHHhcCCccCCCHHHHhh
Confidence            4   455999999999999999884

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-33  Score=247.17  Aligned_cols=243  Identities=20%  Similarity=0.218  Sum_probs=183.1

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEecccc---ccHHHHHHHHHHHccCCCCCcceEeeeEeC---CeeEEEEeeCC
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALN---LEKDAFYREIQLLGRLHHRHLLALQGFSTG---RKRLLVFDNIE  115 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~---~~~~~~~~ei~~l~~l~h~niv~~~~~~~~---~~~~lv~e~~~  115 (309)
                      .+.||.|++|.||+|... ++..+++|.+....   ...+.+.+|++++++++|+|++++++++.+   ...++|+||++
T Consensus         4 ~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~   83 (287)
T cd07840           4 IAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMD   83 (287)
T ss_pred             eEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEecccc
Confidence            367999999999999975 47889999996542   234568899999999999999999997754   47889999998


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc------
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN------  189 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~------  189 (309)
                      + +|.+++... ...+++..+..++.+++.||++|   |..+++|+||+|+||+++.++.++++|||++.....      
T Consensus        84 ~-~l~~~~~~~-~~~~~~~~~~~i~~~i~~al~~L---H~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~  158 (287)
T cd07840          84 H-DLTGLLDSP-EVKFTESQIKCYMKQLLEGLQYL---HSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADY  158 (287)
T ss_pred             c-cHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHH---HHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccc
Confidence            6 898888653 25789999999999999999999   778999999999999999999999999998864432      


Q ss_pred             --cCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhc--c---ccccccccc-------
Q 021659          190 --YATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESS--I---SSSIHRMID-------  252 (309)
Q Consensus       190 --~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~--~---~~~~~~~~~-------  252 (309)
                        ..++..|.+||...   ..+.++||||||+++++|++|+.||..............  .   ....+...+       
T Consensus       159 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (287)
T cd07840         159 TNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENL  238 (287)
T ss_pred             cccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhc
Confidence              23456799999643   347889999999999999999999976543322111110  0   000000000       


Q ss_pred             -CcCC------CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          253 -PDLG------GSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       253 -~~l~------~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                       +...      ..........+.+++.+||..+|.+||++.+++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         239 KPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             cccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence             0000      0000001456778888999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-33  Score=247.57  Aligned_cols=245  Identities=17%  Similarity=0.234  Sum_probs=182.9

Q ss_pred             cccccccCCCceEEEEEEc-CCcEEEEEEeccccc--cHHHHHHHHHHHccCC-CCCcceEeeeEe-CCeeEEEEeeCCC
Q 021659           42 FHRIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL--EKDAFYREIQLLGRLH-HRHLLALQGFST-GRKRLLVFDNIEN  116 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~-h~niv~~~~~~~-~~~~~lv~e~~~~  116 (309)
                      +.+.||+|++|.||+|+.. +++.|++|.+.....  +.....+|+..+++++ |+|++++++++. +...++||||+ +
T Consensus         3 ~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~   81 (283)
T cd07830           3 VIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-E   81 (283)
T ss_pred             eheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-C
Confidence            3467999999999999975 478899998854332  2334567999999998 999999999664 47788999999 7


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc------c
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN------Y  190 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~------~  190 (309)
                      ++|.+++.......+++..+..++.+++.+|.||   |+++++|+||+|+||+++.++.++|+|||++.....      .
T Consensus        82 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L---h~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~  158 (283)
T cd07830          82 GNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHI---HKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDY  158 (283)
T ss_pred             CCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCC
Confidence            7999988764345789999999999999999999   778999999999999999999999999999865432      2


Q ss_pred             CCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhc---------------cccccccccc
Q 021659          191 ATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESS---------------ISSSIHRMID  252 (309)
Q Consensus       191 ~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~---------------~~~~~~~~~~  252 (309)
                      .++..|.+||...   ..+.++|+||||+++++|++|+.||..............               ..........
T Consensus       159 ~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (283)
T cd07830         159 VSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFP  238 (283)
T ss_pred             CCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccccc
Confidence            4567899999642   347899999999999999999999975543222111000               0000000000


Q ss_pred             CcCCC---CCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          253 PDLGG---SYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       253 ~~l~~---~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .....   .........+.+++.+||+.+|++|||+.|++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         239 QFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             ccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence            00000   000111356778888999999999999999875

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=7.5e-34  Score=255.29  Aligned_cols=241  Identities=15%  Similarity=0.203  Sum_probs=181.1

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc---ccHHHHHHHHHHHccCCCCCcceEeeeEe-----CCeeEEEEeeC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN---LEKDAFYREIQLLGRLHHRHLLALQGFST-----GRKRLLVFDNI  114 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~---~~~~~~~~ei~~l~~l~h~niv~~~~~~~-----~~~~~lv~e~~  114 (309)
                      +.||+|++|.||++.. .++..|++|++....   ...+.+.+|+.++++++||||+++.+++.     ....++|+||+
T Consensus        11 ~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~   90 (334)
T cd07855          11 ENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLM   90 (334)
T ss_pred             eeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehh
Confidence            5799999999999996 458899999985432   23456788999999999999999998653     24578999999


Q ss_pred             CCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------
Q 021659          115 ENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------  188 (309)
Q Consensus       115 ~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------  188 (309)
                      . ++|.+.+..  ...+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++.+||+|||++....      
T Consensus        91 ~-~~l~~~~~~--~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~  164 (334)
T cd07855          91 E-SDLHHIIHS--DQPLTEEHIRYFLYQLLRGLKYI---HSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEH  164 (334)
T ss_pred             h-hhHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcCC
Confidence            6 599998876  45699999999999999999999   77899999999999999999999999999885432      


Q ss_pred             -----ccCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccc-c------------c
Q 021659          189 -----NYATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISS-S------------I  247 (309)
Q Consensus       189 -----~~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~-~------------~  247 (309)
                           ...++..|.+||...   ..+.++||||||+++++|++|+.||.......+........+ .            .
T Consensus       165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  244 (334)
T cd07855         165 KYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRV  244 (334)
T ss_pred             CcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhH
Confidence                 224667899999643   347889999999999999999999976543221110000000 0            0


Q ss_pred             cccccCc-CCCCC-----CHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          248 HRMIDPD-LGGSY-----DSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       248 ~~~~~~~-l~~~~-----~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ....+.. .....     .......+.+++.+||+.+|++||++.+++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  293 (334)
T cd07855         245 RKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ  293 (334)
T ss_pred             HHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            0000000 00000     0112456777888999999999999999885

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.1e-33  Score=251.73  Aligned_cols=250  Identities=17%  Similarity=0.193  Sum_probs=186.8

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEecccc---ccHHHHHHHHHHHccCCCCCcceEeeeEeCC------eeEEEEe
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALN---LEKDAFYREIQLLGRLHHRHLLALQGFSTGR------KRLLVFD  112 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~---~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~------~~~lv~e  112 (309)
                      .+.||.|++|.||+|+.. .+..+++|.+....   ...+.+.+|++.++.++|+||+++.+++...      ..|++|+
T Consensus         5 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e   84 (330)
T cd07834           5 LKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTE   84 (330)
T ss_pred             eeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEec
Confidence            368999999999999975 48899999885432   2346789999999999999999999976542      5789999


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc---
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN---  189 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~---  189 (309)
                      |+.+ +|.+.+..  ...+++..+..++.+++.||.+|   |+.+++||||+|.||+++.++.++|+|||++.....   
T Consensus        85 ~~~~-~l~~~l~~--~~~l~~~~~~~i~~~l~~~l~~L---H~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~  158 (330)
T cd07834          85 LMET-DLHKVIKS--PQPLTDDHIQYFLYQILRGLKYL---HSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDED  158 (330)
T ss_pred             chhh-hHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccccc
Confidence            9985 89998876  45899999999999999999999   778999999999999999999999999999865432   


Q ss_pred             -------cCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccc-------------
Q 021659          190 -------YATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSS-------------  246 (309)
Q Consensus       190 -------~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~-------------  246 (309)
                             ..++..|.+||...   ..+.++|+||||+++++|++|..||................+.             
T Consensus       159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  238 (330)
T cd07834         159 EKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEK  238 (330)
T ss_pred             ccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccc
Confidence                   23566799999743   3478899999999999999999999765432211110000000             


Q ss_pred             cccccc---CcCCC---CCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHH--Hhhhhcc
Q 021659          247 IHRMID---PDLGG---SYDSKELKKLLAVARLCIKTKDKPTISIPQISRY--LQNEVDI  298 (309)
Q Consensus       247 ~~~~~~---~~l~~---~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~--L~~~~~~  298 (309)
                      ....+.   .....   .........+.+++.+||+.+|++||++.+++..  +++..+-
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~  298 (330)
T cd07834         239 ARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP  298 (330)
T ss_pred             hhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence            000000   00000   0001123556778889999999999999999963  5544443

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=2.8e-33  Score=245.18  Aligned_cols=231  Identities=18%  Similarity=0.233  Sum_probs=174.8

Q ss_pred             ccccCCCceEEEEEEc-CCcEEEEEEecccccc----HHHHHHHHH---HHccCCCCCcceEeeeEeC-CeeEEEEeeCC
Q 021659           45 IVYTNSHGAAYKARFQ-DGEVALVKEIQALNLE----KDAFYREIQ---LLGRLHHRHLLALQGFSTG-RKRLLVFDNIE  115 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~----~~~~~~ei~---~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~  115 (309)
                      .||+|+||.||++... +++.||+|.+......    ...+..|..   .+....||||+.+.+.+.+ ...++|+||+.
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            4799999999999864 5789999988543211    122334443   3444579999999986654 67789999999


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-----cc
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-----NY  190 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-----~~  190 (309)
                      +++|.+++..  ...+++..+..++.|++.|+.||   |+.+++|+||+|+||+++.++.++|+|||++....     ..
T Consensus        81 g~~L~~~l~~--~~~l~~~~~~~~~~ql~~~l~~l---H~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~  155 (278)
T cd05606          81 GGDLHYHLSQ--HGVFSEAEMRFYAAEIILGLEHM---HNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS  155 (278)
T ss_pred             CCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCc
Confidence            9999999875  56799999999999999999999   77899999999999999999999999999876432     23


Q ss_pred             CCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHH-HHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          191 ATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQ-WIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       191 ~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                      .++..|++||...   ..+.++||||+|+++++|++|+.||........ .......      ...+.++...    ...
T Consensus       156 ~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~----s~~  225 (278)
T cd05606         156 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL------TMAVELPDSF----SPE  225 (278)
T ss_pred             CCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhh------ccCCCCCCcC----CHH
Confidence            5778999999754   347889999999999999999999975422111 1111100      0111222111    345


Q ss_pred             HHHHHHHccCCCCCCCC-----ChHHHHH
Q 021659          267 LLAVARLCIKTKDKPTI-----SIPQISR  290 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rp-----s~~evl~  290 (309)
                      +.+++.+|+..+|..||     ++.++++
T Consensus       226 ~~~li~~~l~~~p~~R~~~~~~~~~~ll~  254 (278)
T cd05606         226 LRSLLEGLLQRDVNRRLGCLGRGAQEVKE  254 (278)
T ss_pred             HHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence            55666699999999999     8999884

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=1.7e-33  Score=250.25  Aligned_cols=235  Identities=20%  Similarity=0.231  Sum_probs=179.8

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|++|.||+|... ++..+++|.+....    ...+++.+|+++++.++|+|++++.+++.+ ...++|+||+.+ 
T Consensus        21 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-   99 (308)
T cd06634          21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLG-   99 (308)
T ss_pred             HheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccCC-
Confidence            57999999999999964 57889999885321    123467889999999999999999997755 667899999974 


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---ccCCCC
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---NYATMP  194 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---~~~~~~  194 (309)
                      ++.+.+... ...+++..+..++.+++.|+.||   |+.+++||||+|+||+++.++.++++|||++....   ...++.
T Consensus       100 ~l~~~~~~~-~~~l~~~~~~~~~~~l~~~l~~L---H~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  175 (308)
T cd06634         100 SASDLLEVH-KKPLQEVEIAAVTHGALQGLAYL---HSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTP  175 (308)
T ss_pred             CHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHhEEECCCCcEEECCcccceeecCcccccCCc
Confidence            887776432 35689999999999999999999   77899999999999999999999999999876543   235678


Q ss_pred             CCCCCCCCC-----CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHH
Q 021659          195 HSSCPEDCS-----TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLA  269 (309)
Q Consensus       195 ~~~~PE~~~-----~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~  269 (309)
                      .|++||...     ..+.++||||||+++++|++|..||........ ...... ...     +.....   .....+.+
T Consensus       176 ~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~-~~~-----~~~~~~---~~~~~~~~  245 (308)
T cd06634         176 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYHIAQ-NES-----PALQSG---HWSEYFRN  245 (308)
T ss_pred             cccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHH-HHHHhh-cCC-----CCcCcc---cccHHHHH
Confidence            899999642     347789999999999999999999865432211 111111 110     111111   12344556


Q ss_pred             HHHHccCCCCCCCCChHHHHHHHh
Q 021659          270 VARLCIKTKDKPTISIPQISRYLQ  293 (309)
Q Consensus       270 l~~~cl~~dp~~Rps~~evl~~L~  293 (309)
                      ++.+||.++|++||++.+++....
T Consensus       246 li~~cl~~~P~~Rp~~~~ll~~~~  269 (308)
T cd06634         246 FVDSCLQKIPQDRPTSEVLLKHRF  269 (308)
T ss_pred             HHHHHhhCCcccCCCHHHHhhCcc
Confidence            677999999999999999987644

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2e-34  Score=264.03  Aligned_cols=234  Identities=21%  Similarity=0.295  Sum_probs=190.3

Q ss_pred             cccccCCCceEEEEEEc--CC--cEEEEEEecccccc--HHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ--DG--EVALVKEIQALNLE--KDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~--~~--~~va~K~~~~~~~~--~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~~  117 (309)
                      ++||+|.||.|++|.|.  +|  ..||+|.+..+...  ..+|.+|+..+.+|+|+|++++||+..+....+|+|.++.|
T Consensus       116 e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp~mMV~ELaplG  195 (1039)
T KOG0199|consen  116 ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQPAMMVFELAPLG  195 (1039)
T ss_pred             HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccchhhHHhhhcccc
Confidence            57999999999999983  34  45799999655544  56899999999999999999999999887777999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccccc-------
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNY-------  190 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~-------  190 (309)
                      ||.+++.+.....|-....-.++.||+.|+.||   ..++.|||||-.+|+++-....|||+|||+.+-+...       
T Consensus       196 SLldrLrka~~~~llv~~Lcdya~QiA~aM~YL---eskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~  272 (1039)
T KOG0199|consen  196 SLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYL---ESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMA  272 (1039)
T ss_pred             hHHHHHhhccccceeHHHHHHHHHHHHHHHHHH---hhhhhhhhhhhhhhheecccceeeeecccceeccCCCCcceEec
Confidence            999999886567788888999999999999999   9999999999999999999999999999998755432       


Q ss_pred             ---CCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHH
Q 021659          191 ---ATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKEL  264 (309)
Q Consensus       191 ---~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  264 (309)
                         .-...||+||..  +.++.++|||++|+++|||+| |+.||.+.....-+.. ....   ..+..|.       .+.
T Consensus       273 p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~-iD~~---erLpRPk-------~cs  341 (1039)
T KOG0199|consen  273 PQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKN-IDAG---ERLPRPK-------YCS  341 (1039)
T ss_pred             CCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHh-cccc---ccCCCCC-------CCh
Confidence               223579999964  456889999999999999998 8899987654332211 1111   1111122       236


Q ss_pred             HHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          265 KKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       265 ~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      +++-+++..||..+|++|||...|.+.
T Consensus       342 edIY~imk~cWah~paDRptFsair~~  368 (1039)
T KOG0199|consen  342 EDIYQIMKNCWAHNPADRPTFSAIRED  368 (1039)
T ss_pred             HHHHHHHHHhccCCccccccHHHHHHh
Confidence            777788889999999999999999743

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=6.4e-33  Score=247.06  Aligned_cols=233  Identities=21%  Similarity=0.249  Sum_probs=179.0

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc----cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL----EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~----~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      ..||+|++|.||+|+. .+++.|++|.+.....    ..+.+.+|+++++.++|||++++++++.+ ...++||||+.+ 
T Consensus        27 ~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-  105 (313)
T cd06633          27 HEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCLG-  105 (313)
T ss_pred             eeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCCC-
Confidence            4699999999999996 4578999998853222    12467889999999999999999997754 677899999965 


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---ccCCCC
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---NYATMP  194 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---~~~~~~  194 (309)
                      ++.+.+... ...+++..+..++.+++.|+.||   |+.+++|+||+|+||+++.++.++|+|||++....   ...++.
T Consensus       106 ~l~~~l~~~-~~~l~~~~~~~~~~qi~~al~~L---H~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~~~  181 (313)
T cd06633         106 SASDLLEVH-KKPLQEVEIAAITHGALQGLAYL---HSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGTP  181 (313)
T ss_pred             CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccccc
Confidence            777776532 35689999999999999999999   77899999999999999999999999999876432   235677


Q ss_pred             CCCCCCCC-----CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHH
Q 021659          195 HSSCPEDC-----STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLA  269 (309)
Q Consensus       195 ~~~~PE~~-----~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~  269 (309)
                      .|.+||..     ...+.++||||||+++++|++|..||..............  ...     +.......   ...+.+
T Consensus       182 ~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~--~~~-----~~~~~~~~---~~~l~~  251 (313)
T cd06633         182 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ--NDS-----PTLQSNEW---TDSFRG  251 (313)
T ss_pred             cccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh--cCC-----CCCCcccc---CHHHHH
Confidence            89999975     2346789999999999999999999876543322221111  111     11111111   233556


Q ss_pred             HHHHccCCCCCCCCChHHHHHH
Q 021659          270 VARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       270 l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      ++.+||+++|.+||++.+++..
T Consensus       252 li~~~l~~~P~~Rp~~~~~l~~  273 (313)
T cd06633         252 FVDYCLQKIPQERPASAELLRH  273 (313)
T ss_pred             HHHHHccCChhhCcCHHHHhcC
Confidence            6669999999999999998853

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=9.8e-34  Score=252.08  Aligned_cols=185  Identities=18%  Similarity=0.210  Sum_probs=152.4

Q ss_pred             ccccccCCCceEEEEEEc---CCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC---CeeEEEEe
Q 021659           43 HRIVYTNSHGAAYKARFQ---DGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG---RKRLLVFD  112 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~---~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~---~~~~lv~e  112 (309)
                      .+.||+|++|.||+|...   ++..||+|.+....    ...+.+.+|++++++++||||+++++++.+   ...++|||
T Consensus         5 ~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e   84 (316)
T cd07842           5 EGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFD   84 (316)
T ss_pred             EEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEe
Confidence            357999999999999974   47899999986522    223567889999999999999999997754   45789999


Q ss_pred             eCCCCCHHHhhcCC---CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC----CCceeEecccccc
Q 021659          113 NIENGSLKEHLNDP---LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE----NFTAKLSDVGFFN  185 (309)
Q Consensus       113 ~~~~~sL~~~i~~~---~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~----~~~~kl~dfg~~~  185 (309)
                      |+++ ++.+.+...   ....+++..++.++.|++.||.||   |+.+++|+||+|+||+++.    ++.+|++|||++.
T Consensus        85 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~  160 (316)
T cd07842          85 YAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYL---HSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLAR  160 (316)
T ss_pred             CCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHH---HhCCEeeCCCCHHHEEEcCCCCccceEEECCCcccc
Confidence            9976 677666421   124789999999999999999999   7889999999999999999    8999999999887


Q ss_pred             cccc----------cCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCC
Q 021659          186 SVRN----------YATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGD  231 (309)
Q Consensus       186 ~~~~----------~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~  231 (309)
                      ....          ..++..|+|||...   ..+.++||||||+++++|++|+.||.+.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~  219 (316)
T cd07842         161 LFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGR  219 (316)
T ss_pred             ccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCC
Confidence            5432          23467799999643   3467899999999999999999999754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=2.3e-33  Score=245.99  Aligned_cols=243  Identities=17%  Similarity=0.216  Sum_probs=182.4

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCC
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGS  118 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~s  118 (309)
                      .+.||+|++|.||+|+.. ++..||+|.+....  ...+.+.+|++++++++|+||+++++++.+ ...++|+||+++ +
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~   83 (284)
T cd07836           5 LEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDK-D   83 (284)
T ss_pred             eeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCc-c
Confidence            368999999999999974 58899999885432  234567889999999999999999997654 677899999986 8


Q ss_pred             HHHhhcCCC-CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------cc
Q 021659          119 LKEHLNDPL-KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NY  190 (309)
Q Consensus       119 L~~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~  190 (309)
                      |.+++.... ...+++..+..++.|++.||.||   |+.+++|+||+|+||+++.++.++++|||++....       ..
T Consensus        84 l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~  160 (284)
T cd07836          84 LKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFC---HENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNE  160 (284)
T ss_pred             HHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccccc
Confidence            888876432 35689999999999999999999   77899999999999999999999999999886432       23


Q ss_pred             CCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhc-----ccc------cccccccCcCC
Q 021659          191 ATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESS-----ISS------SIHRMIDPDLG  256 (309)
Q Consensus       191 ~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~-----~~~------~~~~~~~~~l~  256 (309)
                      .++..|.+||...+   .+.++|+||||+++++|++|+.||.+............     ...      ....+. ....
T Consensus       161 ~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  239 (284)
T cd07836         161 VVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYK-PTFP  239 (284)
T ss_pred             cccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhc-cccc
Confidence            45678999996432   36789999999999999999999976543221111000     000      000000 0000


Q ss_pred             C-------CCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          257 G-------SYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       257 ~-------~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .       ...+.....+.+++.+|++.||.+||++.++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         240 RYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             CCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            0       000112345667777999999999999999875

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.4e-33  Score=253.15  Aligned_cols=253  Identities=16%  Similarity=0.176  Sum_probs=184.5

Q ss_pred             CHHHHHHhhcccc--cccccCCCceEEEEEE-cCCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC
Q 021659           31 SYKDIKMATDGFH--RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG  104 (309)
Q Consensus        31 ~~~~i~~~~~~~~--~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~  104 (309)
                      ...++...+++|.  +.||+|+||.||++.. .++..||+|++.....   ..+.+.+|++++++++||||+++++++..
T Consensus         8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~   87 (345)
T cd07877           8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP   87 (345)
T ss_pred             HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence            3445666667776  4799999999999985 5688999998854322   23567889999999999999999996642


Q ss_pred             -------CeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCcee
Q 021659          105 -------RKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAK  177 (309)
Q Consensus       105 -------~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~k  177 (309)
                             ...+++++++ +++|.+.+..   ..+++..+..++.|++.||.||   |+.+++|+||+|+||+++.++.++
T Consensus        88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~dlkp~NIll~~~~~~k  160 (345)
T cd07877          88 ARSLEEFNDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELK  160 (345)
T ss_pred             cccccccccEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCChHHEEEcCCCCEE
Confidence                   2356677766 6799988864   4689999999999999999999   778999999999999999999999


Q ss_pred             Eecccccccccc----cCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhc-----ccc
Q 021659          178 LSDVGFFNSVRN----YATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESS-----ISS  245 (309)
Q Consensus       178 l~dfg~~~~~~~----~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~-----~~~  245 (309)
                      |+|||++.....    ..++..|++||...   ..+.++||||||+++++|++|+.||..............     ...
T Consensus       161 l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  240 (345)
T cd07877         161 ILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE  240 (345)
T ss_pred             EecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence            999999865432    34577899999643   347789999999999999999999975433221111000     000


Q ss_pred             ccccccc----------CcCCCC-C---CHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          246 SIHRMID----------PDLGGS-Y---DSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       246 ~~~~~~~----------~~l~~~-~---~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ....+.+          +..... +   .......+.+++.+|+++||..||++.+++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~  299 (345)
T cd07877         241 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  299 (345)
T ss_pred             HHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence            0000000          000000 0   0011345667777999999999999999884

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.8e-33  Score=252.45  Aligned_cols=247  Identities=17%  Similarity=0.246  Sum_probs=182.0

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc---ccHHHHHHHHHHHccCCCCCcceEeeeEeC-------CeeEEEEe
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN---LEKDAFYREIQLLGRLHHRHLLALQGFSTG-------RKRLLVFD  112 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~---~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-------~~~~lv~e  112 (309)
                      +.||+|++|.||+|.. .+++.||+|.+....   .....+.+|+.++++++||||+++++++..       ...++|+|
T Consensus        21 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e  100 (342)
T cd07879          21 KQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMP  100 (342)
T ss_pred             EEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEEec
Confidence            5899999999999996 468899999885422   223467899999999999999999997642       24579999


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc---
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN---  189 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~---  189 (309)
                      |+.. +|..+..    ..+++..+..++.+++.||.||   |+.+++||||+|+||+++.++.++|+|||++.....   
T Consensus       101 ~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~aL~~L---H~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~~~  172 (342)
T cd07879         101 YMQT-DLQKIMG----HPLSEDKVQYLVYQMLCGLKYI---HSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAEMT  172 (342)
T ss_pred             cccc-CHHHHHc----CCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCCCC
Confidence            9975 7877653    4588999999999999999999   788999999999999999999999999999865432   


Q ss_pred             -cCCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccc-cc------------ccccc
Q 021659          190 -YATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISS-SI------------HRMID  252 (309)
Q Consensus       190 -~~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~-~~------------~~~~~  252 (309)
                       ..++..|++||....   .+.++||||||+++++|++|+.||.+..............+ ..            .....
T Consensus       173 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (342)
T cd07879         173 GYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIK  252 (342)
T ss_pred             CceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHh
Confidence             345678999997533   46789999999999999999999986543322211111000 00            00000


Q ss_pred             --CcCCCCC----CHHHHHHHHHHHHHccCCCCCCCCChHHHHH--HHhhhhcc
Q 021659          253 --PDLGGSY----DSKELKKLLAVARLCIKTKDKPTISIPQISR--YLQNEVDI  298 (309)
Q Consensus       253 --~~l~~~~----~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~--~L~~~~~~  298 (309)
                        +......    .+.....+.+++.+||+.||++||++.+++.  .++...+.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~  306 (342)
T cd07879         253 SLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDA  306 (342)
T ss_pred             hcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccc
Confidence              0000000    0112345677888999999999999999993  46655544

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=100.00  E-value=4.9e-34  Score=262.63  Aligned_cols=186  Identities=23%  Similarity=0.297  Sum_probs=159.5

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccc--cccHHHHHHHHHHHccCCCCCcceEeeeEeC-------CeeEEEEee
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQAL--NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-------RKRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~--~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-------~~~~lv~e~  113 (309)
                      +.||+|+||.||+|+. ..|+.||+|.+...  ....+...+|+++|++|+|+|||++++.-..       ....+||||
T Consensus        19 e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEy   98 (732)
T KOG4250|consen   19 ERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEY   98 (732)
T ss_pred             hhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEee
Confidence            6899999999999995 67999999999542  3346788999999999999999999986533       345799999


Q ss_pred             CCCCCHHHhhcCC-CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeC--CCC--ceeEeccccccccc
Q 021659          114 IENGSLKEHLNDP-LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLD--ENF--TAKLSDVGFFNSVR  188 (309)
Q Consensus       114 ~~~~sL~~~i~~~-~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~--~~~--~~kl~dfg~~~~~~  188 (309)
                      |.+|||+.++++- +...+++.+.+.++.+++.||.||   |+++|+||||||.||++.  .+|  ..||+|||.|+...
T Consensus        99 C~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~L---rEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~  175 (732)
T KOG4250|consen   99 CSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHL---RENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELD  175 (732)
T ss_pred             cCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHH---HHcCceeccCCCCcEEEeecCCCceEEeeecccccccCC
Confidence            9999999999864 347899999999999999999999   889999999999999984  233  47999999998665


Q ss_pred             c------cCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCc
Q 021659          189 N------YATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDV  232 (309)
Q Consensus       189 ~------~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~  232 (309)
                      +      ..||..|.+||.+-   .++...|.|||||++|+++||..||.+..
T Consensus       176 d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~  228 (732)
T KOG4250|consen  176 DNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFG  228 (732)
T ss_pred             CCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCC
Confidence            3      47999999999743   35788999999999999999999996543

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=4.9e-33  Score=239.73  Aligned_cols=234  Identities=22%  Similarity=0.324  Sum_probs=184.9

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc---ccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN---LEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~---~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~s  118 (309)
                      +.||.|++|.||++... ++..+++|.+....   ...+.+.+|+++++.++|+|++++.+.+. ....++++|++++++
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~   85 (258)
T cd08215           6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGD   85 (258)
T ss_pred             eeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCCc
Confidence            57999999999999974 57899999986543   23457889999999999999999999654 467789999999999


Q ss_pred             HHHhhcCCC--CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------
Q 021659          119 LKEHLNDPL--KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------  189 (309)
Q Consensus       119 L~~~i~~~~--~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------  189 (309)
                      |.+++....  ...+++..+..++.+++.||.+|   |+.+++|+||+|+||+++.++.++|+|||.+.....       
T Consensus        86 L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---h~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~  162 (258)
T cd08215          86 LSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYL---HSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKT  162 (258)
T ss_pred             HHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHH---HhCCEecccCChHHeEEcCCCcEEECCccceeecccCcceecc
Confidence            999987632  47799999999999999999999   778999999999999999999999999998764432       


Q ss_pred             cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          190 YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ..+++.|++||....  .+.++|+||+|+++++|++|+.||..... ........ ....     +.++..    ....+
T Consensus       163 ~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-~~~~~~~~-~~~~-----~~~~~~----~~~~~  231 (258)
T cd08215         163 VVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL-LELALKIL-KGQY-----PPIPSQ----YSSEL  231 (258)
T ss_pred             eeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH-HHHHHHHh-cCCC-----CCCCCC----CCHHH
Confidence            346678999996433  46889999999999999999999975432 22221111 1111     111111    12455


Q ss_pred             HHHHHHccCCCCCCCCChHHHHHH
Q 021659          268 LAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      .+++.+||..+|+.|||+.+++..
T Consensus       232 ~~~i~~~l~~~p~~Rp~~~~ll~~  255 (258)
T cd08215         232 RNLVSSLLQKDPEERPSIAQILQS  255 (258)
T ss_pred             HHHHHHHcCCChhhCcCHHHHhcC
Confidence            667779999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=4.5e-33  Score=245.14  Aligned_cols=232  Identities=21%  Similarity=0.257  Sum_probs=178.6

Q ss_pred             ccccccCCCceEEEEEE----cCCcEEEEEEecccc-----ccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEE
Q 021659           43 HRIVYTNSHGAAYKARF----QDGEVALVKEIQALN-----LEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVF  111 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~----~~~~~va~K~~~~~~-----~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~  111 (309)
                      .+.||+|+||.||.+..    .+|..||+|.+....     ...+.+.+|+.+++++ +|+||+.+++++.. ...++|+
T Consensus         5 ~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (290)
T cd05613           5 LKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLIL   84 (290)
T ss_pred             eeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEE
Confidence            36899999999999985    368899999985422     1235678899999999 59999999987654 6678999


Q ss_pred             eeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc--
Q 021659          112 DNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN--  189 (309)
Q Consensus       112 e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~--  189 (309)
                      ||+++++|.+++..  ...+++..+..++.+++.||.+|   |+.+++||||+|+||+++.++.++|+|||++.....  
T Consensus        85 e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~l---H~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~  159 (290)
T cd05613          85 DYINGGELFTHLSQ--RERFKEQEVQIYSGEIVLALEHL---HKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDE  159 (290)
T ss_pred             ecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHeEECCCCCEEEeeCccceeccccc
Confidence            99999999999976  46788999999999999999999   788999999999999999999999999998865432  


Q ss_pred             ------cCCCCCCCCCCCCCC----CCCCCcEeehhhHHHHHHhCCCCCCCCcc---HHHHHHHhcccccccccccCcCC
Q 021659          190 ------YATMPHSSCPEDCST----QDCSNIIFQLGVLILELVTGQSPEEGDVD---LIQWIQESSISSSIHRMIDPDLG  256 (309)
Q Consensus       190 ------~~~~~~~~~PE~~~~----~~~~~Dv~slG~~l~~l~tg~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~  256 (309)
                            ..++..|.+||....    .+.++||||||+++++|++|..||.....   ...........       .+..+
T Consensus       160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~-------~~~~~  232 (290)
T cd05613         160 VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKS-------EPPYP  232 (290)
T ss_pred             ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhcc-------CCCCC
Confidence                  236778999997542    36789999999999999999999864321   11111111000       01111


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCC-----ChHHHHH
Q 021659          257 GSYDSKELKKLLAVARLCIKTKDKPTI-----SIPQISR  290 (309)
Q Consensus       257 ~~~~~~~~~~l~~l~~~cl~~dp~~Rp-----s~~evl~  290 (309)
                      .    .....+.+++.+||..||++||     ++.+++.
T Consensus       233 ~----~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~  267 (290)
T cd05613         233 Q----EMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK  267 (290)
T ss_pred             c----cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence            1    1123455666799999999997     6667664

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=1.4e-33  Score=243.32  Aligned_cols=235  Identities=20%  Similarity=0.243  Sum_probs=184.9

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEecccc---ccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCC
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQALN---LEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENG  117 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~---~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~  117 (309)
                      .+.||+|++|.||++.. .++..+++|.+....   ....++.+|++++++++|+||+++.+++. ....++|+||++++
T Consensus         5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~   84 (256)
T cd08530           5 LKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFG   84 (256)
T ss_pred             eeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCC
Confidence            36799999999999986 467889999986432   23456788999999999999999998554 47788999999999


Q ss_pred             CHHHhhcCC--CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-----c
Q 021659          118 SLKEHLNDP--LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-----Y  190 (309)
Q Consensus       118 sL~~~i~~~--~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-----~  190 (309)
                      +|.+++...  ....+++..+..++.+++.||.+|   |+.+++|+||+|.||+++.++.++++|||++.....     .
T Consensus        85 ~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~l---h~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~  161 (256)
T cd08530          85 DLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQAL---HEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQ  161 (256)
T ss_pred             CHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH---hhCCcccCCCCcceEEEecCCcEEEeeccchhhhccCCcccc
Confidence            999988642  236789999999999999999999   888999999999999999999999999998865432     3


Q ss_pred             CCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHH
Q 021659          191 ATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL  268 (309)
Q Consensus       191 ~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~  268 (309)
                      .++..|.+||....  .+.++|+||||+++++|++|+.||...... .... .......     +.+    ......++.
T Consensus       162 ~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~-~~~~-~~~~~~~-----~~~----~~~~~~~~~  230 (256)
T cd08530         162 IGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ-DLRY-KVQRGKY-----PPI----PPIYSQDLQ  230 (256)
T ss_pred             cCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHH-HHhcCCC-----CCC----chhhCHHHH
Confidence            46778999997543  367899999999999999999999754321 1111 1111111     111    123345677


Q ss_pred             HHHHHccCCCCCCCCChHHHHHH
Q 021659          269 AVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       269 ~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      +++.+||..+|++||++.+++..
T Consensus       231 ~li~~~l~~~p~~Rp~~~~~l~~  253 (256)
T cd08530         231 NFIRSMLQVKPKLRPNCDKILAS  253 (256)
T ss_pred             HHHHHHcCCCcccCCCHHHHhcC
Confidence            78889999999999999999863

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=100.00  E-value=7.8e-33  Score=242.75  Aligned_cols=244  Identities=18%  Similarity=0.185  Sum_probs=179.4

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEecccccc---HHHHHHHHHHHccC---CCCCcceEeeeEeC-Ce-----eEE
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLE---KDAFYREIQLLGRL---HHRHLLALQGFSTG-RK-----RLL  109 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l---~h~niv~~~~~~~~-~~-----~~l  109 (309)
                      .+.||+|++|.||++... ++..||+|.+......   ...+.+|+++++++   +|+|++++++++.+ ..     .++
T Consensus         4 ~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l   83 (287)
T cd07838           4 LAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTL   83 (287)
T ss_pred             EEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEE
Confidence            467999999999999985 4889999998533222   24566788777666   59999999997754 33     789


Q ss_pred             EEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc
Q 021659          110 VFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN  189 (309)
Q Consensus       110 v~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~  189 (309)
                      +|||+.+ +|.+++.......+++..+..++.++++||.+|   |+.+++|+||+|+||+++.++.++|+|||.+.....
T Consensus        84 ~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~L---H~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~  159 (287)
T cd07838          84 VFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFL---HSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSF  159 (287)
T ss_pred             Eehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeccCChhhEEEccCCCEEEeccCcceeccC
Confidence            9999975 898888654345689999999999999999999   778999999999999999999999999998865432


Q ss_pred             ------cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHH---hcccccc---------cc
Q 021659          190 ------YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQE---SSISSSI---------HR  249 (309)
Q Consensus       190 ------~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~---~~~~~~~---------~~  249 (309)
                            ..++..|.+||....  .+.++|+||||+++++|++|.+||............   .......         ..
T Consensus       160 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (287)
T cd07838         160 EMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRS  239 (287)
T ss_pred             CcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchh
Confidence                  235667999996533  477899999999999999999998765432221111   1000000         00


Q ss_pred             cccCcCCC---CCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          250 MIDPDLGG---SYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       250 ~~~~~l~~---~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ........   .........+.+++.+||..||+.||++.+++.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         240 SFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             hcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence            00000000   011122456677888999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=1.4e-33  Score=246.49  Aligned_cols=230  Identities=17%  Similarity=0.222  Sum_probs=181.5

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccCC-CCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRLH-HRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~-h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      +.||+|++|.||++... ++..+++|++....    ...+.+.+|++++++++ |+||+++++++.+ ...++|||++++
T Consensus         7 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~   86 (280)
T cd05581           7 KIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPN   86 (280)
T ss_pred             eeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCC
Confidence            67999999999999974 68899999985422    22356788999999998 9999999996654 678899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccccc------
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNY------  190 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~------  190 (309)
                      ++|.+++..  ...+++..+..++.+++.||.+|   |+.+++|+||+|+||+++.++.++++|||++......      
T Consensus        87 ~~L~~~l~~--~~~l~~~~~~~i~~ql~~~l~~L---h~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~  161 (280)
T cd05581          87 GELLQYIRK--YGSLDEKCTRFYAAEILLALEYL---HSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESN  161 (280)
T ss_pred             CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccC
Confidence            999999986  45799999999999999999999   7789999999999999999999999999987644321      


Q ss_pred             ---------------------CCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccc
Q 021659          191 ---------------------ATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSI  247 (309)
Q Consensus       191 ---------------------~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~  247 (309)
                                           .++..|.+||....  .+.++|+||||++++++++|+.||........ ......   .
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~---~  237 (280)
T cd05581         162 KGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLT-FQKILK---L  237 (280)
T ss_pred             CCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHH-HHHHHh---c
Confidence                                 24577899996433  46789999999999999999999986543221 111110   0


Q ss_pred             cccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCCh----HHHHH
Q 021659          248 HRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISI----PQISR  290 (309)
Q Consensus       248 ~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~----~evl~  290 (309)
                          ...++..    ....+.+++.+||+.+|++||++    .+++.
T Consensus       238 ----~~~~~~~----~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         238 ----EYSFPPN----FPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA  276 (280)
T ss_pred             ----CCCCCCc----cCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence                0111111    13456677779999999999999    77764

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=5.2e-33  Score=245.96  Aligned_cols=242  Identities=19%  Similarity=0.191  Sum_probs=180.0

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEecccc---ccHHHHHHHHHHHccCCCCCcceEeeeEeCC-----------ee
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALN---LEKDAFYREIQLLGRLHHRHLLALQGFSTGR-----------KR  107 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~---~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~-----------~~  107 (309)
                      .+.||+|++|.||+|... +++.|++|.+....   .....+.+|++++++++|||++++++++.+.           ..
T Consensus        12 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~   91 (302)
T cd07864          12 IGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAF   91 (302)
T ss_pred             eeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcE
Confidence            368999999999999974 57899999985432   2235677899999999999999999976532           57


Q ss_pred             EEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc
Q 021659          108 LLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV  187 (309)
Q Consensus       108 ~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~  187 (309)
                      ++|+||+++ ++.+.+... ...+++..+..++.|++.||+||   |+.+++|+||+|+||+++.++.+||+|||++...
T Consensus        92 ~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~L---H~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~  166 (302)
T cd07864          92 YLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYC---HKKNFLHRDIKCSNILLNNKGQIKLADFGLARLY  166 (302)
T ss_pred             EEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEECCCCcEEeCcccccccc
Confidence            899999987 777777643 45789999999999999999999   7889999999999999999999999999988654


Q ss_pred             cc--------cCCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHH--HHhcccc---cccccc
Q 021659          188 RN--------YATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWI--QESSISS---SIHRMI  251 (309)
Q Consensus       188 ~~--------~~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~--~~~~~~~---~~~~~~  251 (309)
                      ..        ...+..|.+||....   .+.++||||||+++++|++|+.||..........  .......   ..+.+.
T Consensus       167 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (302)
T cd07864         167 NSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVI  246 (302)
T ss_pred             cCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccc
Confidence            32        233567999996532   4688999999999999999999997654332221  1110000   000000


Q ss_pred             --------cC------cCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          252 --------DP------DLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       252 --------~~------~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                              ++      .+.... ......+.+++.+||..+|++|||+.+++.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         247 KLPYFNTMKPKKQYRRRLREEF-SFIPTPALDLLDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             ccccccccccccccccchhhhc-CCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence                    00      000000 011345667777999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=3.5e-33  Score=251.19  Aligned_cols=241  Identities=19%  Similarity=0.237  Sum_probs=179.5

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccc---cccHHHHHHHHHHHccC-CCCCcceEeeeEeC---CeeEEEEeeCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQAL---NLEKDAFYREIQLLGRL-HHRHLLALQGFSTG---RKRLLVFDNIE  115 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~---~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~---~~~~lv~e~~~  115 (309)
                      +.||+|++|.||+|... ++..+++|++...   ......+.+|+.+++++ +||||+++++++..   ...++|+||+.
T Consensus        13 ~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~   92 (337)
T cd07852          13 QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYME   92 (337)
T ss_pred             HhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEecccc
Confidence            68999999999999974 5788999988432   22345677899999999 99999999997643   35789999997


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc------
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN------  189 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~------  189 (309)
                      + +|..++..   ..+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++.+||+|||++.....      
T Consensus        93 ~-~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~L---H~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~  165 (337)
T cd07852          93 T-DLHAVIRA---NILEDVHKRYIMYQLLKALKYI---HSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPE  165 (337)
T ss_pred             c-CHHHHHhc---CCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccccccccc
Confidence            5 99998875   3788999999999999999999   778999999999999999999999999998763321      


Q ss_pred             ------cCCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccc-------------c
Q 021659          190 ------YATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSS-------------I  247 (309)
Q Consensus       190 ------~~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~-------------~  247 (309)
                            ..++..|.+||....   .+.++|+||||+++++|++|+.||.+..............+.             .
T Consensus       166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (337)
T cd07852         166 NPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFA  245 (337)
T ss_pred             CcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhH
Confidence                  245677999996432   467899999999999999999999754332211110000000             0


Q ss_pred             ccccc----CcCC--CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          248 HRMID----PDLG--GSYDSKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       248 ~~~~~----~~l~--~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      ..+.+    ....  ..........+.+++.+||+.||+.|||+.++++.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         246 ATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             HHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence            00000    0000  00000123556777889999999999999999954

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=3.5e-33  Score=246.59  Aligned_cols=241  Identities=13%  Similarity=0.091  Sum_probs=167.0

Q ss_pred             ccccccCCCceEEEEEEcC----CcEEEEEEecccccc--HH----------HHHHHHHHHccCCCCCcceEeeeEeC--
Q 021659           43 HRIVYTNSHGAAYKARFQD----GEVALVKEIQALNLE--KD----------AFYREIQLLGRLHHRHLLALQGFSTG--  104 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~----~~~va~K~~~~~~~~--~~----------~~~~ei~~l~~l~h~niv~~~~~~~~--  104 (309)
                      .+.||+|+||.||+|...+    +..+++|........  .+          ....+...+..+.|+|++.+++++..  
T Consensus        17 ~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~   96 (294)
T PHA02882         17 DKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCGSFKR   96 (294)
T ss_pred             eeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEeeeEec
Confidence            4689999999999999744    345666654221111  01          11233445667789999999986532  


Q ss_pred             ---CeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecc
Q 021659          105 ---RKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDV  181 (309)
Q Consensus       105 ---~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~df  181 (309)
                         ...+++++++.. ++.+.+..  ....++..+..++.|++.||.||   |+.+++||||||+||+++.++.++|+||
T Consensus        97 ~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~l---H~~~iiHrDiKp~Nill~~~~~~~l~DF  170 (294)
T PHA02882         97 CRMYYRFILLEKLVE-NTKEIFKR--IKCKNKKLIKNIMKDMLTTLEYI---HEHGISHGDIKPENIMVDGNNRGYIIDY  170 (294)
T ss_pred             CCceEEEEEEehhcc-CHHHHHHh--hccCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCcEEEEEc
Confidence               134577777644 67666654  33467888999999999999999   7889999999999999999999999999


Q ss_pred             ccccccc--------------ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccc
Q 021659          182 GFFNSVR--------------NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISS  245 (309)
Q Consensus       182 g~~~~~~--------------~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~  245 (309)
                      |++....              ...+|+.|+|||...+  .+.++|||||||++++|++|+.||.........+.... ..
T Consensus       171 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~-~~  249 (294)
T PHA02882        171 GIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAK-CD  249 (294)
T ss_pred             CCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhH-HH
Confidence            9986431              1257889999996543  47899999999999999999999976532111111000 00


Q ss_pred             cccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHh
Q 021659          246 SIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQ  293 (309)
Q Consensus       246 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~  293 (309)
                      -...+..+.+.....   ...+.+++..|+..+|++||++.++.+.|.
T Consensus       250 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~  294 (294)
T PHA02882        250 FIKRLHEGKIKIKNA---NKFIYDFIECVTKLSYEEKPDYDALIKIFD  294 (294)
T ss_pred             HHHHhhhhhhccCCC---CHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence            001111111111111   244556666999999999999999998763

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=100.00  E-value=4.4e-33  Score=249.73  Aligned_cols=249  Identities=18%  Similarity=0.214  Sum_probs=184.0

Q ss_pred             HHhhcccc--cccccCCCceEEEEEEc-CCcEEEEEEeccc---cccHHHHHHHHHHHccCCCCCcceEeeeEeC--Cee
Q 021659           36 KMATDGFH--RIVYTNSHGAAYKARFQ-DGEVALVKEIQAL---NLEKDAFYREIQLLGRLHHRHLLALQGFSTG--RKR  107 (309)
Q Consensus        36 ~~~~~~~~--~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~---~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~--~~~  107 (309)
                      ...+++|.  +.||.|+||.||++... ++..||+|.+...   ....+.+..|++++++++||||+++.+++..  ...
T Consensus         6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~   85 (328)
T cd07856           6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDI   85 (328)
T ss_pred             eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcE
Confidence            34556665  68999999999999864 6889999987432   2234568899999999999999999997643  567


Q ss_pred             EEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc
Q 021659          108 LLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV  187 (309)
Q Consensus       108 ~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~  187 (309)
                      ++++||+. ++|.+++..   ..+++..+..++.|+++||.+|   |+.+++|+||+|+||+++.++.++++|||.+...
T Consensus        86 ~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~L---H~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~  158 (328)
T cd07856          86 YFVTELLG-TDLHRLLTS---RPLEKQFIQYFLYQILRGLKYV---HSAGVVHRDLKPSNILINENCDLKICDFGLARIQ  158 (328)
T ss_pred             EEEeehhc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEeECCCCCEEeCcccccccc
Confidence            89999984 589988864   4688888999999999999999   7889999999999999999999999999988654


Q ss_pred             cc----cCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHH--HHhcc-----------cccc
Q 021659          188 RN----YATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWI--QESSI-----------SSSI  247 (309)
Q Consensus       188 ~~----~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~--~~~~~-----------~~~~  247 (309)
                      ..    ..++..|++||...   ..+.++|+||||+++++|++|+.||..........  .....           ....
T Consensus       159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (328)
T cd07856         159 DPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENT  238 (328)
T ss_pred             CCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhh
Confidence            32    34567899999643   34788999999999999999999997654321111  00000           0000


Q ss_pred             cccccCc-CCCCCCH-----HHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          248 HRMIDPD-LGGSYDS-----KELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       248 ~~~~~~~-l~~~~~~-----~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      .+..... .....+.     .....+.+++.+||+.+|++|||+.+++..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         239 LRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             HHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            0000000 0000010     113566777789999999999999999854

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=3e-33  Score=252.20  Aligned_cols=243  Identities=15%  Similarity=0.169  Sum_probs=177.7

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc-cHHHHHHHHHHHccCCCCCcceEeeeEeC---------------Ce
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL-EKDAFYREIQLLGRLHHRHLLALQGFSTG---------------RK  106 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~-~~~~~~~ei~~l~~l~h~niv~~~~~~~~---------------~~  106 (309)
                      +.||.|++|.||+|.. .++..|++|.+..... ..+.+.+|++++++++||||+++++++..               ..
T Consensus        11 ~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (342)
T cd07854          11 RPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNS   90 (342)
T ss_pred             EEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccce
Confidence            6899999999999996 4578999998854332 34568899999999999999999875432               24


Q ss_pred             eEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC-CCceeEecccccc
Q 021659          107 RLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE-NFTAKLSDVGFFN  185 (309)
Q Consensus       107 ~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~-~~~~kl~dfg~~~  185 (309)
                      .++|+||+.+ +|.+.+..   ..+++..+..++.|++.||.||   |+.+++|+||+|+||+++. ++.++++|||.+.
T Consensus        91 ~~lv~e~~~~-~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~L---H~~givH~dikp~Nili~~~~~~~kl~dfg~~~  163 (342)
T cd07854          91 VYIVQEYMET-DLANVLEQ---GPLSEEHARLFMYQLLRGLKYI---HSANVLHRDLKPANVFINTEDLVLKIGDFGLAR  163 (342)
T ss_pred             EEEEeecccc-cHHHHHHc---CCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEEcCCCceEEECCcccce
Confidence            6799999975 99888864   4688999999999999999999   7789999999999999974 5678999999886


Q ss_pred             ccc----------ccCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccc------
Q 021659          186 SVR----------NYATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSS------  246 (309)
Q Consensus       186 ~~~----------~~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~------  246 (309)
                      ...          ...++..|.|||...   ..+.++|||||||++++|++|+.||..................      
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  243 (342)
T cd07854         164 IVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDR  243 (342)
T ss_pred             ecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHh
Confidence            432          123566799999642   3467899999999999999999999755432221111000000      


Q ss_pred             ------cccccc-CcCCCCCC-----HHHHHHHHHHHHHccCCCCCCCCChHHHH--HHHh
Q 021659          247 ------IHRMID-PDLGGSYD-----SKELKKLLAVARLCIKTKDKPTISIPQIS--RYLQ  293 (309)
Q Consensus       247 ------~~~~~~-~~l~~~~~-----~~~~~~l~~l~~~cl~~dp~~Rps~~evl--~~L~  293 (309)
                            ...... .......+     ......+.+++.+||..||++|||+.+++  ..++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~  304 (342)
T cd07854         244 NELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMS  304 (342)
T ss_pred             hhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccc
Confidence                  000000 00000000     01134566777799999999999999998  4444

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=100.00  E-value=5.5e-33  Score=250.63  Aligned_cols=248  Identities=16%  Similarity=0.211  Sum_probs=184.2

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC-C------eeEEEEe
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG-R------KRLLVFD  112 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~------~~~lv~e  112 (309)
                      +.||+|++|.||++.. .++..||+|.+.....   ..+.+.+|++++++++||||+++++++.. .      ..++|++
T Consensus        21 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e  100 (343)
T cd07880          21 KQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMP  100 (343)
T ss_pred             EEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEEe
Confidence            5799999999999985 4688999998853222   23467899999999999999999996643 1      3479999


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc---
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN---  189 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~---  189 (309)
                      |+ +++|.+++..   ..+++..+..++.|++.||.||   |+.+++|+||+|+||+++.++.++++|||++.....   
T Consensus       101 ~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~L---H~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~  173 (343)
T cd07880         101 FM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYI---HAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSEMT  173 (343)
T ss_pred             cC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEEeecccccccccCcc
Confidence            98 6699988864   5689999999999999999999   788999999999999999999999999999865432   


Q ss_pred             -cCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccccc-------------cccc
Q 021659          190 -YATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIH-------------RMID  252 (309)
Q Consensus       190 -~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~-------------~~~~  252 (309)
                       ..++..|++||...   ..+.++|+||||++++++++|+.||.+.................+             ....
T Consensus       174 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (343)
T cd07880         174 GYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVK  253 (343)
T ss_pred             ccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHH
Confidence             34567899999643   246789999999999999999999986543322221111000000             0000


Q ss_pred             --CcCCC----CCCHHHHHHHHHHHHHccCCCCCCCCChHHHH--HHHhhhhcc
Q 021659          253 --PDLGG----SYDSKELKKLLAVARLCIKTKDKPTISIPQIS--RYLQNEVDI  298 (309)
Q Consensus       253 --~~l~~----~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl--~~L~~~~~~  298 (309)
                        +....    .........+.+++.+|++.||++|||+.+++  ..++...+.
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~  307 (343)
T cd07880         254 KLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDP  307 (343)
T ss_pred             hccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCc
Confidence              00000    00011234567788899999999999999998  555554444

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=100.00  E-value=4.6e-33  Score=244.86  Aligned_cols=236  Identities=20%  Similarity=0.233  Sum_probs=180.4

Q ss_pred             ccccccCCCceEEEEEE----cCCcEEEEEEecccc-----ccHHHHHHHHHHHccC-CCCCcceEeeeEe-CCeeEEEE
Q 021659           43 HRIVYTNSHGAAYKARF----QDGEVALVKEIQALN-----LEKDAFYREIQLLGRL-HHRHLLALQGFST-GRKRLLVF  111 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~----~~~~~va~K~~~~~~-----~~~~~~~~ei~~l~~l-~h~niv~~~~~~~-~~~~~lv~  111 (309)
                      .+.||+|++|.||+++.    .++..||+|.+....     ...+.+.+|++++.++ +||||+++++.+. +...++||
T Consensus         5 ~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   84 (288)
T cd05583           5 LRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLIL   84 (288)
T ss_pred             EEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEE
Confidence            36799999999999984    356889999885332     1234678999999999 5999999998654 46778999


Q ss_pred             eeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc--
Q 021659          112 DNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN--  189 (309)
Q Consensus       112 e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~--  189 (309)
                      ||+++++|.+.+..  ...+++..+..++.|+++||.+|   |..+++||||+|+||+++.++.++++|||++.....  
T Consensus        85 e~~~~~~L~~~~~~--~~~~~~~~~~~~~~ql~~~l~~l---H~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~  159 (288)
T cd05583          85 DYVNGGELFTHLYQ--REHFTESEVRVYIAEIVLALDHL---HQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEE  159 (288)
T ss_pred             ecCCCCcHHHHHhh--cCCcCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHeEECCCCCEEEEECcccccccccc
Confidence            99999999999875  46789999999999999999999   778999999999999999999999999998764321  


Q ss_pred             ------cCCCCCCCCCCCCCC----CCCCCcEeehhhHHHHHHhCCCCCCCCccH--HHHHHHhcccccccccccCcCCC
Q 021659          190 ------YATMPHSSCPEDCST----QDCSNIIFQLGVLILELVTGQSPEEGDVDL--IQWIQESSISSSIHRMIDPDLGG  257 (309)
Q Consensus       190 ------~~~~~~~~~PE~~~~----~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~  257 (309)
                            ..++..|.+||....    .+.++|+||||+++++|++|..||......  ...........      .+..+.
T Consensus       160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~------~~~~~~  233 (288)
T cd05583         160 EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS------KPPFPK  233 (288)
T ss_pred             ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc------CCCCCc
Confidence                  246778999996432    467899999999999999999999643211  11111110000      111111


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHh
Q 021659          258 SYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQ  293 (309)
Q Consensus       258 ~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~  293 (309)
                      ..    ...+.+++.+||+.||+.|||+.++...|.
T Consensus       234 ~~----~~~l~~li~~~l~~~p~~R~t~~~~~~~l~  265 (288)
T cd05583         234 TM----SAEARDFIQKLLEKDPKKRLGANGADEIKN  265 (288)
T ss_pred             cc----CHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence            11    234556677999999999999887776654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.3e-33  Score=238.50  Aligned_cols=225  Identities=20%  Similarity=0.252  Sum_probs=177.6

Q ss_pred             cccCCCceEEEEEEc-CCcEEEEEEeccccc----cHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCH
Q 021659           46 VYTNSHGAAYKARFQ-DGEVALVKEIQALNL----EKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSL  119 (309)
Q Consensus        46 lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~----~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL  119 (309)
                      ||+|++|.||++... ++..+++|.+.....    ..+.+..|++++++++|+||+++++.+. +...+++|||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            689999999999975 488999998854332    2357889999999999999999998665 4678899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------cCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------YAT  192 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------~~~  192 (309)
                      .+++..  ...+++..+..++.+++.|+.+|   |+.+++|+||+|.||+++.++.++++|||.+.....       ..+
T Consensus        81 ~~~l~~--~~~l~~~~~~~~~~qi~~~l~~l---h~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~  155 (250)
T cd05123          81 FSHLSK--EGRFSEERARFYAAEIVLALEYL---HSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCG  155 (250)
T ss_pred             HHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcC
Confidence            999976  45789999999999999999999   778999999999999999999999999998764432       345


Q ss_pred             CCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          193 MPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       193 ~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      +..|.+||....  .+.++|+||||++++++++|+.||..... ......... .      ...++...    ...+.++
T Consensus       156 ~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-~~~~~~~~~-~------~~~~~~~~----~~~l~~~  223 (250)
T cd05123         156 TPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-KEIYEKILK-D------PLRFPEFL----SPEARDL  223 (250)
T ss_pred             CccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHhc-C------CCCCCCCC----CHHHHHH
Confidence            678999997543  46789999999999999999999975542 121111111 0      01111111    2445566


Q ss_pred             HHHccCCCCCCCCChHH
Q 021659          271 ARLCIKTKDKPTISIPQ  287 (309)
Q Consensus       271 ~~~cl~~dp~~Rps~~e  287 (309)
                      +.+||..||++||++.+
T Consensus       224 i~~~l~~~p~~R~~~~~  240 (250)
T cd05123         224 ISGLLQKDPTKRLGSGG  240 (250)
T ss_pred             HHHHhcCCHhhCCCccc
Confidence            66999999999999943

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=1.1e-32  Score=243.62  Aligned_cols=237  Identities=18%  Similarity=0.268  Sum_probs=176.8

Q ss_pred             ccccccCCCceEEEEEEcC-CcEEEEEEeccccc--cHHHHHHHHHHHccCC-CCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           43 HRIVYTNSHGAAYKARFQD-GEVALVKEIQALNL--EKDAFYREIQLLGRLH-HRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~-~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~-h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      .+.||+|++|.||++...+ +..||+|.+.....  ...++..|++.+.++. |+||+++++++.+ ...+++|||+.+ 
T Consensus        20 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~-   98 (296)
T cd06618          20 LGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMST-   98 (296)
T ss_pred             eeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccCc-
Confidence            3689999999999999864 88999999864322  2345667887776774 9999999997754 678899999865 


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc------cC
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN------YA  191 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~------~~  191 (309)
                      ++.+++... ...+++..+..++.+++.|+.|||+  ..+++||||+|+||+++.++.++|+|||++.....      ..
T Consensus        99 ~l~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~--~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~~~~  175 (296)
T cd06618          99 CLDKLLKRI-QGPIPEDILGKMTVAIVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRSA  175 (296)
T ss_pred             CHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh--hCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCcccCCC
Confidence            777766542 3478999999999999999999942  35899999999999999999999999999864421      23


Q ss_pred             CCCCCCCCCCCCC------CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHH
Q 021659          192 TMPHSSCPEDCST------QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELK  265 (309)
Q Consensus       192 ~~~~~~~PE~~~~------~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  265 (309)
                      ++..|++||....      .+.++|+||||+++++|++|+.||.......+........ ..     +......  ....
T Consensus       176 ~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~~-----~~~~~~~--~~~~  247 (296)
T cd06618         176 GCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQE-EP-----PSLPPNE--GFSP  247 (296)
T ss_pred             CCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcC-CC-----CCCCCCC--CCCH
Confidence            5568999996532      3678999999999999999999997543222222211111 11     1111100  1124


Q ss_pred             HHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          266 KLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       266 ~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      .+.+++.+||..||+.||++.+++..
T Consensus       248 ~l~~li~~~l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         248 DFCSFVDLCLTKDHRKRPKYRELLQH  273 (296)
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhcC
Confidence            56667779999999999999999854

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.7e-33  Score=253.97  Aligned_cols=244  Identities=16%  Similarity=0.214  Sum_probs=181.5

Q ss_pred             cccc--cccccCCCceEEEEEEc-CCcEEEEEEecccc---ccHHHHHHHHHHHccCCCCCcceEeeeEeC-C------e
Q 021659           40 DGFH--RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN---LEKDAFYREIQLLGRLHHRHLLALQGFSTG-R------K  106 (309)
Q Consensus        40 ~~~~--~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~---~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~------~  106 (309)
                      ++|.  +.||+|++|.||+|... ++..||+|.+....   ...+.+.+|+.++++++|+|++++.+++.. .      .
T Consensus        15 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   94 (343)
T cd07851          15 DRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQD   94 (343)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccccc
Confidence            4444  58999999999999974 57889999885422   223567789999999999999999885532 2      3


Q ss_pred             eEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccc
Q 021659          107 RLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNS  186 (309)
Q Consensus       107 ~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~  186 (309)
                      .++|+||+ +++|.+++..   ..+++..+..++.+++.||.+|   |+.+++|+||+|+||+++.++.++|+|||++..
T Consensus        95 ~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~L---H~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~  167 (343)
T cd07851          95 VYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYI---HSAGIIHRDLKPSNIAVNEDCELKILDFGLARH  167 (343)
T ss_pred             EEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEECCCCCEEEcccccccc
Confidence            78999998 5599999875   5799999999999999999999   778999999999999999999999999999875


Q ss_pred             cc----ccCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccc-ccccc-------
Q 021659          187 VR----NYATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSS-IHRMI-------  251 (309)
Q Consensus       187 ~~----~~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~-------  251 (309)
                      ..    ...++..|.+||...   ..+.++||||||+++++|++|+.||................+. ...+.       
T Consensus       168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  247 (343)
T cd07851         168 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSES  247 (343)
T ss_pred             ccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchh
Confidence            43    235567899999642   3478899999999999999999999765433221111000000 00000       


Q ss_pred             -----cC--cCCC-CC---CHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          252 -----DP--DLGG-SY---DSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       252 -----~~--~l~~-~~---~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                           ..  .... .+   .......+.+++.+||.+||++|||+.+++.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~  297 (343)
T cd07851         248 ARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA  297 (343)
T ss_pred             HHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence                 00  0000 00   0011456777888999999999999999985

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=2.2e-32  Score=238.17  Aligned_cols=224  Identities=19%  Similarity=0.191  Sum_probs=169.9

Q ss_pred             cccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccC-CCCCcceEeeeEe-CCeeEEEEeeCCCCCHHHh
Q 021659           46 VYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRL-HHRHLLALQGFST-GRKRLLVFDNIENGSLKEH  122 (309)
Q Consensus        46 lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~-~~~~~lv~e~~~~~sL~~~  122 (309)
                      +|.|+||.||++.. .++..+++|.+........    |+.....+ +|||++++++.+. +...++||||+++++|.++
T Consensus        24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~----e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~   99 (267)
T PHA03390         24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI----EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDL   99 (267)
T ss_pred             ecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh----hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHH
Confidence            59999999999996 4678899998854332211    22222223 6999999999765 4678899999999999999


Q ss_pred             hcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCC-ceeEeccccccccc---ccCCCCCCCC
Q 021659          123 LNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENF-TAKLSDVGFFNSVR---NYATMPHSSC  198 (309)
Q Consensus       123 i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~-~~kl~dfg~~~~~~---~~~~~~~~~~  198 (309)
                      +..  ...+++..+..++.|+++||.+|   |+.+++|+||+|+||+++.++ .++++|||++....   ...++..|++
T Consensus       100 l~~--~~~l~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y~a  174 (267)
T PHA03390        100 LKK--EGKLSEAEVKKIIRQLVEALNDL---HKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSCYDGTLDYFS  174 (267)
T ss_pred             HHh--cCCCCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCCccCCCCCcccC
Confidence            976  35899999999999999999999   778999999999999999988 99999999886543   2357788999


Q ss_pred             CCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccH----HHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHH
Q 021659          199 PEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDL----IQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVAR  272 (309)
Q Consensus       199 PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~  272 (309)
                      ||....  .+.++|+||||+++++|++|+.||......    ..+....  ...      ....    ......+.+++.
T Consensus       175 PE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~------~~~~----~~~~~~~~~li~  242 (267)
T PHA03390        175 PEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ--QKK------LPFI----KNVSKNANDFVQ  242 (267)
T ss_pred             hhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh--ccc------CCcc----cccCHHHHHHHH
Confidence            997533  467899999999999999999999743221    1111111  000      0010    112345666777


Q ss_pred             HccCCCCCCCCC-hHHHHH
Q 021659          273 LCIKTKDKPTIS-IPQISR  290 (309)
Q Consensus       273 ~cl~~dp~~Rps-~~evl~  290 (309)
                      +||+.+|..||+ +.++++
T Consensus       243 ~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        243 SMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             HHhccChhhCCchHHHHhc
Confidence            999999999996 588873

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=100.00  E-value=4.6e-33  Score=247.11  Aligned_cols=242  Identities=17%  Similarity=0.186  Sum_probs=177.7

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC---------CeeEEE
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG---------RKRLLV  110 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~---------~~~~lv  110 (309)
                      +.||.|++|.||+|... +++.+++|.+.....   ....+.+|++++++++|+||+++++++..         ...++|
T Consensus        14 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv   93 (311)
T cd07866          14 GKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMV   93 (311)
T ss_pred             EEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCceEEEE
Confidence            57999999999999964 578899998853322   23457889999999999999999986532         235899


Q ss_pred             EeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-
Q 021659          111 FDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-  189 (309)
Q Consensus       111 ~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-  189 (309)
                      ++|+.+ ++...+... ...+++..+..++.++++||.||   |+.+++|+||+|+||+++.++.++++|||++..... 
T Consensus        94 ~~~~~~-~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~l---H~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~  168 (311)
T cd07866          94 TPYMDH-DLSGLLENP-SVKLTESQIKCYMLQLLEGINYL---HENHILHRDIKAANILIDNQGILKIADFGLARPYDGP  168 (311)
T ss_pred             EecCCc-CHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEECCCCCEEECcCccchhccCC
Confidence            999976 777766542 45799999999999999999999   788999999999999999999999999998864321 


Q ss_pred             -----------------cCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccc----
Q 021659          190 -----------------YATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISS----  245 (309)
Q Consensus       190 -----------------~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~----  245 (309)
                                       ..++..|.+||...   ..+.++||||||+++++|++|++||.+...............    
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~  248 (311)
T cd07866         169 PPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTE  248 (311)
T ss_pred             CcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence                             12356699999643   246789999999999999999999976544322211110000    


Q ss_pred             -------ccccccc----CcCCCCC---CHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          246 -------SIHRMID----PDLGGSY---DSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       246 -------~~~~~~~----~~l~~~~---~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                             ......+    .......   .......+.+++.+||+.||++|||+.|++.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         249 ETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             hhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence                   0000000    0000000   0111256778888999999999999999875

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-33  Score=237.96  Aligned_cols=245  Identities=16%  Similarity=0.236  Sum_probs=186.7

Q ss_pred             HHHHHHhhcccccccccCCCceEEEEE-EcCCcEEEEEEecccc-ccHHHHHHHHHHHccCC-CCCcceEeeeEeC-Cee
Q 021659           32 YKDIKMATDGFHRIVYTNSHGAAYKAR-FQDGEVALVKEIQALN-LEKDAFYREIQLLGRLH-HRHLLALQGFSTG-RKR  107 (309)
Q Consensus        32 ~~~i~~~~~~~~~~lg~G~~~~v~~~~-~~~~~~va~K~~~~~~-~~~~~~~~ei~~l~~l~-h~niv~~~~~~~~-~~~  107 (309)
                      +++..+.|.   +.||+|+++.|-.++ ..++..||+|++.+.+ ..+.++.+|++++.+-+ |+||+.+++|+.+ ...
T Consensus        75 F~d~YkLt~---e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~F  151 (463)
T KOG0607|consen   75 FEDMYKLTS---ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRF  151 (463)
T ss_pred             HHHHHHhHH---HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceE
Confidence            455555553   679999999999998 5789999999996543 34568999999999995 9999999998876 778


Q ss_pred             EEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCC---ceeEeccccc
Q 021659          108 LLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENF---TAKLSDVGFF  184 (309)
Q Consensus       108 ~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~---~~kl~dfg~~  184 (309)
                      |+|||-+.||+|...|..  ..-|++.++.++.++|+.||.||   |.+||.|||+||.|||..+.+   -+|||||.+.
T Consensus       152 YLVfEKm~GGplLshI~~--~~~F~E~EAs~vvkdia~aLdFl---H~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLg  226 (463)
T KOG0607|consen  152 YLVFEKMRGGPLLSHIQK--RKHFNEREASRVVKDIASALDFL---HTKGIAHRDLKPENILCESPNKVSPVKICDFDLG  226 (463)
T ss_pred             EEEEecccCchHHHHHHH--hhhccHHHHHHHHHHHHHHHHHH---hhcCcccccCCccceeecCCCCcCceeeeccccc
Confidence            899999999999999987  68899999999999999999999   999999999999999997654   4899999875


Q ss_pred             ccc--------------cccCCCCCCCCCCCC-------CCCCCCCcEeehhhHHHHHHhCCCCCCCCcc----------
Q 021659          185 NSV--------------RNYATMPHSSCPEDC-------STQDCSNIIFQLGVLILELVTGQSPEEGDVD----------  233 (309)
Q Consensus       185 ~~~--------------~~~~~~~~~~~PE~~-------~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~----------  233 (309)
                      ...              -...|+..|+|||.-       .-++.+.|.||||+++|-|++|.+||.+.-.          
T Consensus       227 Sg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~  306 (463)
T KOG0607|consen  227 SGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEV  306 (463)
T ss_pred             cccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCc
Confidence            321              134677789999942       2236789999999999999999999965321          


Q ss_pred             ---HHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          234 ---LIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       234 ---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                         -...+.+....+.. ++     +...+..-+..-.+++...+..|+..|.++.++++
T Consensus       307 Cr~CQ~~LFesIQEGkY-eF-----PdkdWahIS~eakdlisnLlvrda~~rlsa~~vln  360 (463)
T KOG0607|consen  307 CRVCQNKLFESIQEGKY-EF-----PDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN  360 (463)
T ss_pred             cHHHHHHHHHHHhccCC-cC-----ChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence               11112222222211 11     11111122233334455888899999999999886

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.3e-33  Score=264.62  Aligned_cols=181  Identities=17%  Similarity=0.209  Sum_probs=139.9

Q ss_pred             cccccCCCceEEEEEEcC--CcEEEEE------------------EeccccccHHHHHHHHHHHccCCCCCcceEeeeEe
Q 021659           44 RIVYTNSHGAAYKARFQD--GEVALVK------------------EIQALNLEKDAFYREIQLLGRLHHRHLLALQGFST  103 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~--~~~va~K------------------~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~  103 (309)
                      +.||+|+||.||++..+.  +...+.|                  .+.........+.+|+.++++++||||+++++++.
T Consensus       154 ~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~  233 (501)
T PHA03210        154 DDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILKIEEILR  233 (501)
T ss_pred             eEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCcEeEEEE
Confidence            589999999999987532  2222222                  11112222346789999999999999999999876


Q ss_pred             C-CeeEEEEeeCCCCCHHHhhcCCC---CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEe
Q 021659          104 G-RKRLLVFDNIENGSLKEHLNDPL---KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLS  179 (309)
Q Consensus       104 ~-~~~~lv~e~~~~~sL~~~i~~~~---~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~  179 (309)
                      . ...|++++++.+ +|..++....   ........+..++.|++.||.||   |+++|+||||||+|||++.++.+||+
T Consensus       234 ~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yL---H~~gIiHrDLKP~NILl~~~~~vkL~  309 (501)
T PHA03210        234 SEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYI---HDKKLIHRDIKLENIFLNCDGKIVLG  309 (501)
T ss_pred             ECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEECCCCCEEEE
Confidence            5 677899999865 7777765321   12234566788999999999999   77899999999999999999999999


Q ss_pred             ccccccccc--------ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCC
Q 021659          180 DVGFFNSVR--------NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPE  228 (309)
Q Consensus       180 dfg~~~~~~--------~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~  228 (309)
                      |||++....        ...++..|++||...+  .+.++|||||||++|||++|..++
T Consensus       310 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p  368 (501)
T PHA03210        310 DFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCP  368 (501)
T ss_pred             eCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence            999986543        2357899999997543  478899999999999999987543

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=7.3e-33  Score=242.30  Aligned_cols=241  Identities=20%  Similarity=0.240  Sum_probs=183.0

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccc---cccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQAL---NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~---~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~s  118 (309)
                      +.||.|.+|.||+|+.. +++.+++|.+...   ....+.+..|++++++++|+|++++++++.+ ...++|+||+++ +
T Consensus         5 ~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~-~   83 (282)
T cd07829           5 EKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCDM-D   83 (282)
T ss_pred             hcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcCc-C
Confidence            57999999999999975 4889999998653   2234578899999999999999999997655 678899999985 9


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------cC
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------YA  191 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------~~  191 (309)
                      |.+++... ...+++..+..++.+++.||.+|   |+.+++||||+|+||+++.++.++|+|||.+.....       ..
T Consensus        84 l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~L---H~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~  159 (282)
T cd07829          84 LKKYLDKR-PGPLSPNLIKSIMYQLLRGLAYC---HSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEV  159 (282)
T ss_pred             HHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCccc
Confidence            99999763 15799999999999999999999   778999999999999999999999999998764432       23


Q ss_pred             CCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhc-----cc-------------cccccc
Q 021659          192 TMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESS-----IS-------------SSIHRM  250 (309)
Q Consensus       192 ~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~-----~~-------------~~~~~~  250 (309)
                      .+..|.+||...   ..+.++|+||||++++++++|..||..............     ..             ...+..
T Consensus       160 ~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (282)
T cd07829         160 VTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKF  239 (282)
T ss_pred             cCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccccccccc
Confidence            356789999643   347889999999999999999999987654322211100     00             000000


Q ss_pred             ccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          251 IDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       251 ~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ..... ..........+.+++.+||..+|++||++.+++.
T Consensus       240 ~~~~~-~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         240 PPKDL-EKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             Cccch-HHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence            00000 0000111356777888999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=100.00  E-value=3.9e-34  Score=239.48  Aligned_cols=235  Identities=17%  Similarity=0.215  Sum_probs=182.9

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccC-CCCCcceEeeeEeC-----CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRL-HHRHLLALQGFSTG-----RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-----~~~~lv~e~~~~  116 (309)
                      ++||-|-.|+|-.+.. ..++.+|+|++...    ....+|+++.-.- .|||||.+++++.+     .-..+|||.++|
T Consensus        68 qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meG  143 (400)
T KOG0604|consen   68 QVLGAGINGKVVQCVHKRTQEKFALKVLLDS----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEG  143 (400)
T ss_pred             hhhccccCCceEEEEeccchhhhHHHHHhcC----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccc
Confidence            5899999999998886 56888999987543    3567888887655 59999999997653     234589999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC---CCceeEeccccccccc-----
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE---NFTAKLSDVGFFNSVR-----  188 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~---~~~~kl~dfg~~~~~~-----  188 (309)
                      |.|..++++.+.+.+++.++..|+.||+.|+.||   |+.+|.||||||.|+|.+.   |..+||+|||+++...     
T Consensus       144 GeLfsriq~~g~~afTErea~eI~~qI~~Av~~l---H~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L  220 (400)
T KOG0604|consen  144 GELFSRIQDRGDQAFTEREASEIMKQIGLAVRYL---HSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDL  220 (400)
T ss_pred             hHHHHHHHHcccccchHHHHHHHHHHHHHHHHHH---HhcchhhccCChhheeeecCCCCcceEecccccccccCCCccc
Confidence            9999999998889999999999999999999999   8889999999999999964   5679999999998554     


Q ss_pred             -ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCcc--HHHHHHHhcccccccccccCcCCCCCCHHH
Q 021659          189 -NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVD--LIQWIQESSISSSIHRMIDPDLGGSYDSKE  263 (309)
Q Consensus       189 -~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  263 (309)
                       ....|+.|+|||....  ++.+.|+||+|+++|-|++|.+||.....  +..-.......+.      -..+...++.-
T Consensus       221 ~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gq------y~FP~pEWs~V  294 (400)
T KOG0604|consen  221 MTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQ------YEFPEPEWSCV  294 (400)
T ss_pred             cCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccC------ccCCChhHhHH
Confidence             4577899999996443  47889999999999999999999965321  1111111111110      01112223334


Q ss_pred             HHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          264 LKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       264 ~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      ++...+++..+|..+|.+|.|+.++.+.
T Consensus       295 Se~aKdlIR~LLkt~PteRlTI~~~m~h  322 (400)
T KOG0604|consen  295 SEAAKDLIRKLLKTEPTERLTIEEVMDH  322 (400)
T ss_pred             HHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence            5556666679999999999999998853

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-33  Score=232.93  Aligned_cols=234  Identities=18%  Similarity=0.286  Sum_probs=174.0

Q ss_pred             ccccCCCceEEEEEEc-CCcEEEEEEecccc--ccHHHHHHHHHHHccC-CCCCcceEeeeE-eCCeeEEEEeeCCCCCH
Q 021659           45 IVYTNSHGAAYKARFQ-DGEVALVKEIQALN--LEKDAFYREIQLLGRL-HHRHLLALQGFS-TGRKRLLVFDNIENGSL  119 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l-~h~niv~~~~~~-~~~~~~lv~e~~~~~sL  119 (309)
                      .||.|+.|.||+++.. .|..+|+|......  .+.+++...+.++.+- ..|+||+.+|++ .+...++.||.|.. -+
T Consensus        99 dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~-C~  177 (391)
T KOG0983|consen   99 DLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST-CA  177 (391)
T ss_pred             hhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH-HH
Confidence            5999999999999975 47899999885433  2334566667666544 489999999965 55666788888744 44


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------ccCCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------NYATM  193 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------~~~~~  193 (309)
                      +.++.. ..+++++.-+-++...+++||.||-  .+++|+|||+||+|||+|..|++|+||||++..+-      ...|-
T Consensus       178 ekLlkr-ik~piPE~ilGk~tva~v~AL~YLK--eKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsAGC  254 (391)
T KOG0983|consen  178 EKLLKR-IKGPIPERILGKMTVAIVKALYYLK--EKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSAGC  254 (391)
T ss_pred             HHHHHH-hcCCchHHhhhhhHHHHHHHHHHHH--HhcceeecccCccceEEccCCCEEeecccccceeecccccccccCC
Confidence            444433 2567999889999999999999996  46799999999999999999999999999986543      23566


Q ss_pred             CCCCCCCCCC-----CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHH
Q 021659          194 PHSSCPEDCS-----TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL  268 (309)
Q Consensus       194 ~~~~~PE~~~-----~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~  268 (309)
                      +.|+|||...     .++-.+||||||++++||+||+.||.+..--...+......+      .|.++....  .+..+.
T Consensus       255 ~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~e------PP~L~~~~g--FSp~F~  326 (391)
T KOG0983|consen  255 AAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEE------PPLLPGHMG--FSPDFQ  326 (391)
T ss_pred             ccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcC------CCCCCcccC--cCHHHH
Confidence            8899999643     346679999999999999999999987432222222221111      133432221  234556


Q ss_pred             HHHHHccCCCCCCCCChHHHHH
Q 021659          269 AVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       269 ~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      +++..||.+|+.+||...++++
T Consensus       327 ~fv~~CL~kd~r~RP~Y~~Ll~  348 (391)
T KOG0983|consen  327 SFVKDCLTKDHRKRPKYNKLLE  348 (391)
T ss_pred             HHHHHHhhcCcccCcchHHHhc
Confidence            6666999999999999998874

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=4.2e-33  Score=253.08  Aligned_cols=231  Identities=20%  Similarity=0.253  Sum_probs=187.8

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccccH---HHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEK---DAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~---~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~s  118 (309)
                      +.||+|.|+.|.+++. .++..||+|.+..+..+.   +.+.+|+++++.|+||||++++++.. ....|+||||+.+|.
T Consensus        62 ~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~ge  141 (596)
T KOG0586|consen   62 KTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGGE  141 (596)
T ss_pred             eeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCch
Confidence            6899999999999996 458899999996655443   45889999999999999999999765 578999999999999


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc------cccCC
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV------RNYAT  192 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~------~~~~~  192 (309)
                      +.+++.+  .....+..+..++.|+++|++||   |++.++|||||..|++++.+-++||+|||++..+      ....|
T Consensus       142 ~~~yl~~--~gr~~e~~ar~~F~q~vsaveYc---H~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lqt~cg  216 (596)
T KOG0586|consen  142 LFDYLVK--HGRMKEKEARAKFRQIVSAVEYC---HSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQTFCG  216 (596)
T ss_pred             hHHHHHh--cccchhhhhhhhhHHHHHHHHHH---hhcceeccccchhhcccccccceeeeccccceeecccccccccCC
Confidence            9999987  56677788999999999999999   8999999999999999999999999999998754      35689


Q ss_pred             CCCCCCCCCCCCC---CCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHH
Q 021659          193 MPHSSCPEDCSTQ---DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLA  269 (309)
Q Consensus       193 ~~~~~~PE~~~~~---~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~  269 (309)
                      ++.|+|||.+.+.   ++..|+||+|+++|.|++|..||.+..-     .+..     +..+.-.+.-.+  -...++-+
T Consensus       217 sppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l-----k~Lr-----~rvl~gk~rIp~--~ms~dce~  284 (596)
T KOG0586|consen  217 SPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL-----KELR-----PRVLRGKYRIPF--YMSCDCED  284 (596)
T ss_pred             CCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc-----cccc-----chheeeeecccc--eeechhHH
Confidence            9999999986654   7899999999999999999999986521     1111     111111111111  11334446


Q ss_pred             HHHHccCCCCCCCCChHHHHHH
Q 021659          270 VARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       270 l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      +++++|..+|..|++++++-+.
T Consensus       285 lLrk~lvl~Pskr~~~dqim~~  306 (596)
T KOG0586|consen  285 LLRKFLVLNPSKRGPCDQIMKD  306 (596)
T ss_pred             HHHHhhccCccccCCHHHhhhh
Confidence            6669999999999999998743

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=100.00  E-value=1.5e-32  Score=237.88  Aligned_cols=235  Identities=17%  Similarity=0.188  Sum_probs=176.7

Q ss_pred             cccccccCCCceEEEEEEcC-CcEEEEEEecc------ccccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEee
Q 021659           42 FHRIVYTNSHGAAYKARFQD-GEVALVKEIQA------LNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~-~~~va~K~~~~------~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      +.+.||+|++|.||++.... +..+++|.++.      .......+..|+.++++++||||+++++++.+ ...++|+||
T Consensus         4 i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (260)
T cd08222           4 LQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEY   83 (260)
T ss_pred             eeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEe
Confidence            34689999999999998643 34445555432      11223456789999999999999999996654 677899999


Q ss_pred             CCCCCHHHhhcC--CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---
Q 021659          114 IENGSLKEHLND--PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---  188 (309)
Q Consensus       114 ~~~~sL~~~i~~--~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---  188 (309)
                      +++++|.+++..  .....+++..+..++.+++.||.+|   |+.+++|+||+|+||+++. +.++++|||++....   
T Consensus        84 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---H~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~  159 (260)
T cd08222          84 CEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYM---HQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC  159 (260)
T ss_pred             CCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHH---HHcCccccCCChhheEeec-CCEeecccCceeecCCCc
Confidence            999999988753  2246799999999999999999999   7889999999999999975 579999999876432   


Q ss_pred             ----ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHH
Q 021659          189 ----NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSK  262 (309)
Q Consensus       189 ----~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  262 (309)
                          ...++..|.+||...  ..+.++|+||||+++++|++|..||............. . ..     .+..    ...
T Consensus       160 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~-~-~~-----~~~~----~~~  228 (260)
T cd08222         160 DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIV-E-GP-----TPSL----PET  228 (260)
T ss_pred             ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH-c-CC-----CCCC----cch
Confidence                234667899999653  34678999999999999999999997543322111111 0 11     1111    122


Q ss_pred             HHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          263 ELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       263 ~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      ....+.+++.+||..+|+.||++.++++.
T Consensus       229 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~  257 (260)
T cd08222         229 YSRQLNSIMQSMLNKDPSLRPSAAEILRN  257 (260)
T ss_pred             hcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence            23456677779999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=100.00  E-value=2e-32  Score=245.86  Aligned_cols=241  Identities=16%  Similarity=0.211  Sum_probs=176.5

Q ss_pred             ccccccCCCceEEEEEEc-C--CcEEEEEEecccc---ccHHHHHHHHHHHccC-CCCCcceEeeeEe---C--CeeEEE
Q 021659           43 HRIVYTNSHGAAYKARFQ-D--GEVALVKEIQALN---LEKDAFYREIQLLGRL-HHRHLLALQGFST---G--RKRLLV  110 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~--~~~va~K~~~~~~---~~~~~~~~ei~~l~~l-~h~niv~~~~~~~---~--~~~~lv  110 (309)
                      .+.||+|+||.||++... .  +..||+|.+....   ...+.+.+|+++++++ .||||+++++++.   .  ...+++
T Consensus         5 ~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~   84 (332)
T cd07857           5 IKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLY   84 (332)
T ss_pred             EEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEE
Confidence            467999999999999964 3  6789999885322   1245678899999999 5999999998542   1  345678


Q ss_pred             EeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc--
Q 021659          111 FDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR--  188 (309)
Q Consensus       111 ~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~--  188 (309)
                      ++++. ++|.+.+..  ...+++..+..++.|++.||.||   |+.+++|+||||+||+++.++.++|+|||++....  
T Consensus        85 ~e~~~-~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~L---H~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~  158 (332)
T cd07857          85 EELME-ADLHQIIRS--GQPLTDAHFQSFIYQILCGLKYI---HSANVLHRDLKPGNLLVNADCELKICDFGLARGFSEN  158 (332)
T ss_pred             Eeccc-CCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccc
Confidence            88886 589998865  56799999999999999999999   78899999999999999999999999999886432  


Q ss_pred             ---------ccCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcc-----cccccccc
Q 021659          189 ---------NYATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSI-----SSSIHRMI  251 (309)
Q Consensus       189 ---------~~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~-----~~~~~~~~  251 (309)
                               ...++..|.+||...   ..+.++|+||||+++++|++|+.||...............     ......+.
T Consensus       159 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (332)
T cd07857         159 PGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIG  238 (332)
T ss_pred             cccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhh
Confidence                     124677899999643   3478899999999999999999999754322111100000     00000000


Q ss_pred             c-------------CcCC-CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHH
Q 021659          252 D-------------PDLG-GSYDSKELKKLLAVARLCIKTKDKPTISIPQIS  289 (309)
Q Consensus       252 ~-------------~~l~-~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl  289 (309)
                      .             +... ..........+.+++.+|++.||++|||+.+++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll  290 (332)
T cd07857         239 SPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEAL  290 (332)
T ss_pred             hhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHh
Confidence            0             0000 000001134566777799999999999999987

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4.2e-33  Score=245.79  Aligned_cols=250  Identities=15%  Similarity=0.256  Sum_probs=186.5

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHc--cCCCCCcceEeeeEeC-----CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLG--RLHHRHLLALQGFSTG-----RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~--~l~h~niv~~~~~~~~-----~~~~lv~e~~~~  116 (309)
                      .++|+|.||.||+|.+. ++.||+|++..  .+++.|.+|-++..  .|+|+||+++++.-..     ...++|++|.+.
T Consensus       216 eli~~Grfg~V~KaqL~-~~~VAVKifp~--~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~k  292 (534)
T KOG3653|consen  216 ELIGRGRFGCVWKAQLD-NRLVAVKIFPE--QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPK  292 (534)
T ss_pred             HHhhcCccceeehhhcc-CceeEEEecCH--HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccC
Confidence            57999999999999984 58999999863  34667877777765  4579999999986432     356799999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhc------CCCCeeecccCCCceeeCCCCceeEeccccccccc--
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLF------SNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR--  188 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~------h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~--  188 (309)
                      |||.++++.   ..++|.+..+++..+++||+|||+.      |+.+|+|||||.+|||+..|++..|+|||++-.+.  
T Consensus       293 GsL~dyL~~---ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~  369 (534)
T KOG3653|consen  293 GSLCDYLKA---NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPG  369 (534)
T ss_pred             CcHHHHHHh---ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCC
Confidence            999999985   7899999999999999999999974      68899999999999999999999999999986543  


Q ss_pred             -------ccCCCCCCCCCCCCCCC--------CCCCcEeehhhHHHHHHhCCCCCC-CC-----ccHHHHHHHhccccc-
Q 021659          189 -------NYATMPHSSCPEDCSTQ--------DCSNIIFQLGVLILELVTGQSPEE-GD-----VDLIQWIQESSISSS-  246 (309)
Q Consensus       189 -------~~~~~~~~~~PE~~~~~--------~~~~Dv~slG~~l~~l~tg~~p~~-~~-----~~~~~~~~~~~~~~~-  246 (309)
                             ...||.+|+|||..-+.        -.+.||||+|.++||++++-..+. +.     ....+.+...+.-+. 
T Consensus       370 ~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~m  449 (534)
T KOG3653|consen  370 KPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEM  449 (534)
T ss_pred             CCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHH
Confidence                   35899999999953222        135899999999999988654432 11     011111111100000 


Q ss_pred             ----ccccccCcCCCCC-CHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccc
Q 021659          247 ----IHRMIDPDLGGSY-DSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQ  299 (309)
Q Consensus       247 ----~~~~~~~~l~~~~-~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~  299 (309)
                          +.+...|.++..+ .......+.+.+..||..||+-|.|+.=+.+.+.++.-..
T Consensus       450 q~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~  507 (534)
T KOG3653|consen  450 QELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLW  507 (534)
T ss_pred             HHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccC
Confidence                1112223333222 1234666777777999999999999998887777665444

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4.9e-32  Score=254.05  Aligned_cols=249  Identities=20%  Similarity=0.274  Sum_probs=201.6

Q ss_pred             cCHHHHHHhhcccc--cccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccC-CCCCcceEeeeEe--
Q 021659           30 FSYKDIKMATDGFH--RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRL-HHRHLLALQGFST--  103 (309)
Q Consensus        30 ~~~~~i~~~~~~~~--~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~--  103 (309)
                      ..++.+...+..|+  ..+|+|.+|.||+++. .+++.+|+|+........+++..|.++|+.+ .|||++.++|++-  
T Consensus         9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~   88 (953)
T KOG0587|consen    9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKK   88 (953)
T ss_pred             cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence            34455555555554  6899999999999995 5688999999877777788899999999998 5999999999642  


Q ss_pred             ----CCeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEe
Q 021659          104 ----GRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLS  179 (309)
Q Consensus       104 ----~~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~  179 (309)
                          +++.|+|||||.+||..|+++.-.+..+.|.-...|+..++.|+.+|   |.+.++|||+|-.|||++.++.||++
T Consensus        89 ~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HL---H~nkviHRDikG~NiLLT~e~~VKLv  165 (953)
T KOG0587|consen   89 DPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHL---HNNKVIHRDIKGQNVLLTENAEVKLV  165 (953)
T ss_pred             cCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHH---hhcceeeecccCceEEEeccCcEEEe
Confidence                36889999999999999999875578899999999999999999999   88889999999999999999999999


Q ss_pred             cccccccc-------cccCCCCCCCCCCCCC-------CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccc
Q 021659          180 DVGFFNSV-------RNYATMPHSSCPEDCS-------TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISS  245 (309)
Q Consensus       180 dfg~~~~~-------~~~~~~~~~~~PE~~~-------~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~  245 (309)
                      |||.+...       +...||+.|+|||...       .++..+|+||||++.+||..|.+|+.+.-....++..     
T Consensus       166 DFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~I-----  240 (953)
T KOG0587|consen  166 DFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI-----  240 (953)
T ss_pred             eeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccC-----
Confidence            99997533       3568999999999632       2356799999999999999999998865544443321     


Q ss_pred             cccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          246 SIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       246 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                        +.-..|++..  +..=.+++.++|..||..|.+.||++.+++.
T Consensus       241 --pRNPPPkLkr--p~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~  281 (953)
T KOG0587|consen  241 --PRNPPPKLKR--PKKWSKKFNDFISTCLVKDYEQRPSTEELLK  281 (953)
T ss_pred             --CCCCCccccc--hhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence              1222233321  2223567777888999999999999998874

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.98  E-value=4.4e-32  Score=232.15  Aligned_cols=213  Identities=14%  Similarity=0.152  Sum_probs=163.6

Q ss_pred             CCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHHHhhcCC
Q 021659           49 NSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLKEHLNDP  126 (309)
Q Consensus        49 G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~~~i~~~  126 (309)
                      |.++.||++.. .+++.||+|.+....    .+..|...+....||||+++++++.+ ...+++|||+++++|.+++.. 
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-   78 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK-   78 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH-
Confidence            88999999996 467899999986433    23344555555679999999996654 678899999999999999876 


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc----cCCCCCCCCCCCC
Q 021659          127 LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN----YATMPHSSCPEDC  202 (309)
Q Consensus       127 ~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~----~~~~~~~~~PE~~  202 (309)
                       ...+++..+..++.+++.||.||   |+.+++|+||||+||+++.++.++++|||.+.....    ..++..|++||..
T Consensus        79 -~~~l~~~~~~~~~~ql~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~  154 (237)
T cd05576          79 -FLNIPEECVKRWAAEMVVALDAL---HREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVG  154 (237)
T ss_pred             -hcCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCccc
Confidence             45689999999999999999999   788999999999999999999999999998654432    2345679999975


Q ss_pred             C--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCC
Q 021659          203 S--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDK  280 (309)
Q Consensus       203 ~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~  280 (309)
                      .  ..+.++|+||+|+++|+|++|..|+........            ......++..    ....+.+++.+|++.||+
T Consensus       155 ~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~------------~~~~~~~~~~----~~~~~~~li~~~l~~dp~  218 (237)
T cd05576         155 GISEETEACDWWSLGAILFELLTGKTLVECHPSGIN------------THTTLNIPEW----VSEEARSLLQQLLQFNPT  218 (237)
T ss_pred             CCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc------------cccccCCccc----CCHHHHHHHHHHccCCHH
Confidence            3  347889999999999999999988753211100            0000011111    123455666699999999


Q ss_pred             CCCChH
Q 021659          281 PTISIP  286 (309)
Q Consensus       281 ~Rps~~  286 (309)
                      +||++.
T Consensus       219 ~R~~~~  224 (237)
T cd05576         219 ERLGAG  224 (237)
T ss_pred             HhcCCC
Confidence            999974

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.98  E-value=8.9e-33  Score=242.56  Aligned_cols=230  Identities=19%  Similarity=0.268  Sum_probs=183.1

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEee-eEeCCeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQG-FSTGRKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~-~~~~~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.|+-+.. ..|+.||+|.+....    .+.....+|-.+|.+++.+.||.+-- |.+....++|+..|.||
T Consensus       191 RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGG  270 (591)
T KOG0986|consen  191 RVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNGG  270 (591)
T ss_pred             EEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecCC
Confidence            6999999999999986 458999999884322    22345678999999999999998854 55668899999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------ccC
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------NYA  191 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------~~~  191 (309)
                      +|.=.|...++..|++..+..++.+|+.||++|   |..+|+.|||||.|||+|+.|+++|+|+|+|..+.      ...
T Consensus       271 DLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehl---H~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~~rv  347 (591)
T KOG0986|consen  271 DLKFHIYNHGNPGFDEQRARFYAAEIICGLEHL---HRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIRGRV  347 (591)
T ss_pred             ceeEEeeccCCCCCchHHHHHHHHHHHhhHHHH---HhcceeeccCChhheeeccCCCeEeeccceEEecCCCCcccccc
Confidence            999999887778999999999999999999999   88999999999999999999999999999997553      348


Q ss_pred             CCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHH--HHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          192 TMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQW--IQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       192 ~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ||.+|+|||...  .++++.|-|||||++|+|+.|+.||......+.+  +.......      ...++ +.-+++.+++
T Consensus       348 GT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~------~~ey~-~kFS~eaksl  420 (591)
T KOG0986|consen  348 GTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLED------PEEYS-DKFSEEAKSL  420 (591)
T ss_pred             CcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcc------hhhcc-cccCHHHHHH
Confidence            999999999643  3689999999999999999999999865443333  11111100      01111 2233445555


Q ss_pred             HHHHHHccCCCCCCCCChH
Q 021659          268 LAVARLCIKTKDKPTISIP  286 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~  286 (309)
                      ++   ..|.+||..|....
T Consensus       421 c~---~LL~Kdp~~RLGcr  436 (591)
T KOG0986|consen  421 CE---GLLTKDPEKRLGCR  436 (591)
T ss_pred             HH---HHHccCHHHhccCC
Confidence            55   99999999987554

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.98  E-value=1e-33  Score=233.49  Aligned_cols=237  Identities=17%  Similarity=0.200  Sum_probs=184.4

Q ss_pred             ccccCCCceEEEEEE-cCCcEEEEEEeccc--cccHHHHHHHHHHHccC-CCCCcceEeee-EeCCeeEEEEeeCCCCCH
Q 021659           45 IVYTNSHGAAYKARF-QDGEVALVKEIQAL--NLEKDAFYREIQLLGRL-HHRHLLALQGF-STGRKRLLVFDNIENGSL  119 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~-~~~~~va~K~~~~~--~~~~~~~~~ei~~l~~l-~h~niv~~~~~-~~~~~~~lv~e~~~~~sL  119 (309)
                      .||.|+||+|++..+ ++|+..|+|.+...  ..+++++..|.+...+- +.||||+++|. +.++..|+.||.|+. ||
T Consensus        71 ~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~-Sl  149 (361)
T KOG1006|consen   71 EIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI-SL  149 (361)
T ss_pred             HhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh-hH
Confidence            599999999999986 57899999999543  34566888898777666 68999999995 456788999999976 77


Q ss_pred             HHhh---cCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------cc
Q 021659          120 KEHL---NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------NY  190 (309)
Q Consensus       120 ~~~i---~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------~~  190 (309)
                      +.+-   .......+++.-...+..-.+.||.||-  ....|+|||+||+|||++..|.+||||||++..+.      ..
T Consensus       150 DklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK--~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~d  227 (361)
T KOG1006|consen  150 DKLYKRVYSVQKSRIPENILGHITVATVDALDYLK--EELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTVD  227 (361)
T ss_pred             HHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHH--HHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhhc
Confidence            6543   2223567888888888888999999995  46789999999999999999999999999986443      23


Q ss_pred             CCCCCCCCCCCCC----CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCC-CHHHHH
Q 021659          191 ATMPHSSCPEDCS----TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSY-DSKELK  265 (309)
Q Consensus       191 ~~~~~~~~PE~~~----~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~  265 (309)
                      .|-..|+|||...    +++-++||||||++++|+.||..|+.+..++...+........      |.+..+. ..+...
T Consensus       228 aGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdp------p~l~~~~~~~~~s~  301 (361)
T KOG1006|consen  228 AGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDP------PILLFDKECVHYSF  301 (361)
T ss_pred             cCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCC------CeecCcccccccCH
Confidence            5667899999642    3567899999999999999999999988776666554433221      2222211 123355


Q ss_pred             HHHHHHHHccCCCCCCCCChHHHHH
Q 021659          266 KLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       266 ~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .+.+++.-||.+|-..||+..++..
T Consensus       302 ~~~~fintCl~Kd~~~Rpky~~Lk~  326 (361)
T KOG1006|consen  302 SMVRFINTCLIKDRSDRPKYDDLKK  326 (361)
T ss_pred             HHHHHHHHHhhcccccCcchhhhhc
Confidence            6777777999999999999998874

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.97  E-value=1.4e-31  Score=209.33  Aligned_cols=239  Identities=18%  Similarity=0.208  Sum_probs=178.9

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccccc---HHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLE---KDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~s  118 (309)
                      ++||+|.||+||+++. +.+++||+|.+..++.+   .....+||-+|+.|+|.||+++++... ++...+|+|||+. +
T Consensus         8 ekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cdq-d   86 (292)
T KOG0662|consen    8 EKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-D   86 (292)
T ss_pred             HhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhhH-H
Confidence            4799999999999995 56899999999544332   356789999999999999999999665 4777899999987 8


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccccc-------C
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNY-------A  191 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~-------~  191 (309)
                      |..+...- ++.++...+..++.|+++||.++   |+..+.|||+||+|++++.+|.+|++|||+++-++..       .
T Consensus        87 lkkyfdsl-ng~~d~~~~rsfmlqllrgl~fc---hshnvlhrdlkpqnllin~ngelkladfglarafgipvrcysaev  162 (292)
T KOG0662|consen   87 LKKYFDSL-NGDLDPEIVRSFMLQLLRGLGFC---HSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEV  162 (292)
T ss_pred             HHHHHHhc-CCcCCHHHHHHHHHHHHhhhhhh---hhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeeecee
Confidence            98887643 57789999999999999999999   7778999999999999999999999999999765533       3


Q ss_pred             CCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhccc-----cc---ccccccCcCCCCC
Q 021659          192 TMPHSSCPEDCST---QDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSIS-----SS---IHRMIDPDLGGSY  259 (309)
Q Consensus       192 ~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~-----~~---~~~~~~~~l~~~~  259 (309)
                      -|.-|.+|....+   ++.+.|+||-||++.|+.. |.+.|++..-..+.......-     ..   +..+.|-.....+
T Consensus       163 vtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~y  242 (292)
T KOG0662|consen  163 VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIY  242 (292)
T ss_pred             eeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCc
Confidence            4566778886544   3788999999999999986 666677654333332222111     11   1111111111111


Q ss_pred             C-----HH-------HHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          260 D-----SK-------ELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       260 ~-----~~-------~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .     ++       ..+++++   ..+.-+|..|.++++.++
T Consensus       243 pattswsqivp~lns~grdllq---kll~cnp~qrisaeaalq  282 (292)
T KOG0662|consen  243 PATTSWSQIVPKLNSTGRDLLQ---KLLKCNPAQRISAEAALQ  282 (292)
T ss_pred             cccchHHHHhhhhcchhHHHHH---HHhccCcccccCHHHHhc
Confidence            1     11       1244444   788889999999988764

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=6.2e-32  Score=251.50  Aligned_cols=237  Identities=15%  Similarity=0.224  Sum_probs=186.8

Q ss_pred             cccccCCCceEEEEEE-cC----CcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARF-QD----GEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~----~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~  116 (309)
                      ++||+|+||+||+|.| +.    .-+||+|++.....  ...++..|+..+.+|.|||+++++|+|.....-+|++|++.
T Consensus       702 kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlvtq~mP~  781 (1177)
T KOG1025|consen  702 KVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLVTQLMPL  781 (1177)
T ss_pred             ceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHHHHhccc
Confidence            5799999999999996 33    34689999854433  35689999999999999999999999987667799999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccccCCC---
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYATM---  193 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~~~~---  193 (309)
                      |+|.++++. +...+.....+-|+.||++|+.||   |+++++||||-.+|+|+.+...+|+.|||+++........   
T Consensus       782 G~LlDyvr~-hr~~igsq~lLnw~~QIAkgM~YL---e~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~  857 (1177)
T KOG1025|consen  782 GCLLDYVRE-HRDNIGSQDLLNWCYQIAKGMKYL---EEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSA  857 (1177)
T ss_pred             chHHHHHHH-hhccccHHHHHHHHHHHHHHHHHH---HhcchhhhhhhhhheeecCCCeEEEEecchhhccCcccccccc
Confidence            999999976 256788899999999999999999   8999999999999999999999999999999876543211   


Q ss_pred             ------CCCCCCCC--CCCCCCCCcEeehhhHHHHHHh-CCCCCCCCc--cHHHHHHHhcccccccccccCcCCCCCCHH
Q 021659          194 ------PHSSCPED--CSTQDCSNIIFQLGVLILELVT-GQSPEEGDV--DLIQWIQESSISSSIHRMIDPDLGGSYDSK  262 (309)
Q Consensus       194 ------~~~~~PE~--~~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  262 (309)
                            ..|+|-|.  ...++.++||||||+++||++| |..|+.+..  ++...+.    .+.  ++..       ++.
T Consensus       858 ~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle----~ge--RLsq-------Ppi  924 (1177)
T KOG1025|consen  858 PGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLE----KGE--RLSQ-------PPI  924 (1177)
T ss_pred             cccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHh----ccc--cCCC-------CCC
Confidence                  22333332  4556899999999999999998 999987542  2211111    111  1111       223


Q ss_pred             HHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          263 ELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       263 ~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                      ...++--++.+||..|++.||++.++.+.+.+++.
T Consensus       925 CtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ar  959 (1177)
T KOG1025|consen  925 CTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMAR  959 (1177)
T ss_pred             ccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence            34566678889999999999999999988876654

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.97  E-value=7.2e-31  Score=223.61  Aligned_cols=228  Identities=23%  Similarity=0.328  Sum_probs=179.6

Q ss_pred             CCceEEEEEEc-CCcEEEEEEecccccc--HHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHHHhhcC
Q 021659           50 SHGAAYKARFQ-DGEVALVKEIQALNLE--KDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLKEHLND  125 (309)
Q Consensus        50 ~~~~v~~~~~~-~~~~va~K~~~~~~~~--~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~~~i~~  125 (309)
                      +||.||+++.. +++.+++|.+......  .+.+.+|++.+++++|+|++++.+++.. ...++++|++++++|.+++..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            57899999985 4889999998544322  5789999999999999999999997764 677899999999999999876


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc------cCCCCCCCCC
Q 021659          126 PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN------YATMPHSSCP  199 (309)
Q Consensus       126 ~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~------~~~~~~~~~P  199 (309)
                        ...+++..+..++.+++.++.+|   |+.+++|+||+|+||+++.++.++++|||.+.....      ..++..|.+|
T Consensus        81 --~~~~~~~~~~~~~~~l~~~l~~l---h~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~p  155 (244)
T smart00220       81 --RGRLSEDEARFYARQILSALEYL---HSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAP  155 (244)
T ss_pred             --ccCCCHHHHHHHHHHHHHHHHHH---HHcCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCH
Confidence              33389999999999999999999   777999999999999999999999999999865433      4567789999


Q ss_pred             CCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCC
Q 021659          200 EDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKT  277 (309)
Q Consensus       200 E~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~  277 (309)
                      |...  ..+.++|+||||++++++++|..||...................     ..   .........+.+++.+|+..
T Consensus       156 E~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~-----~~---~~~~~~~~~~~~~i~~~l~~  227 (244)
T smart00220      156 EVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPP-----FP---PPEWKISPEAKDLIRKLLVK  227 (244)
T ss_pred             HHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCC-----Cc---cccccCCHHHHHHHHHHccC
Confidence            9643  34779999999999999999999997633332222221111100     00   00000234667788899999


Q ss_pred             CCCCCCChHHHHH
Q 021659          278 KDKPTISIPQISR  290 (309)
Q Consensus       278 dp~~Rps~~evl~  290 (309)
                      +|++||++.++++
T Consensus       228 ~p~~Rp~~~~~~~  240 (244)
T smart00220      228 DPEKRLTAEEALQ  240 (244)
T ss_pred             CchhccCHHHHhh
Confidence            9999999999986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.97  E-value=5.7e-32  Score=246.91  Aligned_cols=226  Identities=19%  Similarity=0.204  Sum_probs=175.4

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      ..+|.|+|+.|-.+.. .++...++|++....   ..-.+|+.++... +||||+++.+.+.+ .+.|+|||.+.++-+.
T Consensus       328 ~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~---~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell  404 (612)
T KOG0603|consen  328 EELGEGSFSAVKYCESSPTDQEPAVKIISKRA---DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELL  404 (612)
T ss_pred             cccCCCCccceeeeeccccccchhheeccccc---cccccccchhhhhcCCCcceeecceecCCceeeeeehhccccHHH
Confidence            4699999999988885 457788999986542   2244567666555 69999999998766 7889999999998888


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceee-CCCCceeEeccccccccccc----CCCCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIML-DENFTAKLSDVGFFNSVRNY----ATMPH  195 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill-~~~~~~kl~dfg~~~~~~~~----~~~~~  195 (309)
                      +.+..   .......+..|+.+++.|+.||   |.+|++||||||.|||+ ++.++++|+|||.++.....    .-|..
T Consensus       405 ~ri~~---~~~~~~e~~~w~~~lv~Av~~L---H~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~~t~~  478 (612)
T KOG0603|consen  405 RRIRS---KPEFCSEASQWAAELVSAVDYL---HEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPALTLQ  478 (612)
T ss_pred             HHHHh---cchhHHHHHHHHHHHHHHHHHH---HhcCeeecCCChhheeecCCCCcEEEEEechhhhCchhhcccchhhc
Confidence            87765   3333377888999999999999   77999999999999999 68899999999999877654    45678


Q ss_pred             CCCCCC--CCCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHH
Q 021659          196 SSCPED--CSTQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARL  273 (309)
Q Consensus       196 ~~~PE~--~~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~  273 (309)
                      |+|||.  ..++++++|+||||++||+|++|+.||.....-.+......         .+... ..-+++.++|++   +
T Consensus       479 y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~---------~~~~s-~~vS~~AKdLl~---~  545 (612)
T KOG0603|consen  479 YVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQ---------MPKFS-ECVSDEAKDLLQ---Q  545 (612)
T ss_pred             ccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhc---------CCccc-cccCHHHHHHHH---H
Confidence            999996  45568999999999999999999999976544322222111         11111 223345566666   9


Q ss_pred             ccCCCCCCCCChHHHHHH
Q 021659          274 CIKTKDKPTISIPQISRY  291 (309)
Q Consensus       274 cl~~dp~~Rps~~evl~~  291 (309)
                      ||+.||.+||++.++...
T Consensus       546 LL~~dP~~Rl~~~~i~~h  563 (612)
T KOG0603|consen  546 LLQVDPALRLGADEIGAH  563 (612)
T ss_pred             hccCChhhCcChhhhccC
Confidence            999999999999998743

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=5.9e-32  Score=228.87  Aligned_cols=224  Identities=19%  Similarity=0.248  Sum_probs=177.9

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc----cHHHHHHHHHHHccCCCCCcceEe-eeEeCCeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL----EKDAFYREIQLLGRLHHRHLLALQ-GFSTGRKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~----~~~~~~~ei~~l~~l~h~niv~~~-~~~~~~~~~lv~e~~~~~  117 (309)
                      +.||+|.||+|.+++- ..++.||+|++++.-.    +...-..|-.+|+.-+||.+..+- .|.+....++||||+.||
T Consensus       174 KvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanGG  253 (516)
T KOG0690|consen  174 KVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANGG  253 (516)
T ss_pred             HHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccCc
Confidence            6899999999999995 5689999999864322    222345688899999999998874 477778899999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccc-------cccc
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNS-------VRNY  190 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~-------~~~~  190 (309)
                      .|.-.++.  ...+++.....+...|+.||.||   |+++|+.||||..|+|+|++|++||+|||+++.       ....
T Consensus       254 eLf~HLsr--er~FsE~RtRFYGaEIvsAL~YL---Hs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~kTF  328 (516)
T KOG0690|consen  254 ELFFHLSR--ERVFSEDRTRFYGAEIVSALGYL---HSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTKTF  328 (516)
T ss_pred             eEeeehhh--hhcccchhhhhhhHHHHHHhhhh---hhCCeeeeechhhhheeccCCceEeeecccchhcccccceeccc
Confidence            99888876  68899999999999999999999   779999999999999999999999999999863       3467


Q ss_pred             CCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHH
Q 021659          191 ATMPHSSCPEDC--STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL  268 (309)
Q Consensus       191 ~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~  268 (309)
                      .|||.|.|||..  ..++++.|-|.+|+++|||++|+.||.....-.-.-......-.        .++. -+.+.+.|+
T Consensus       329 CGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~k--------FPr~-ls~eAktLL  399 (516)
T KOG0690|consen  329 CGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLK--------FPRT-LSPEAKTLL  399 (516)
T ss_pred             cCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhcc--------CCcc-CCHHHHHHH
Confidence            899999999964  55689999999999999999999999765432221111111111        1111 123345555


Q ss_pred             HHHHHccCCCCCCCCC
Q 021659          269 AVARLCIKTKDKPTIS  284 (309)
Q Consensus       269 ~l~~~cl~~dp~~Rps  284 (309)
                      .   ..|.+||+.|..
T Consensus       400 s---GLL~kdP~kRLG  412 (516)
T KOG0690|consen  400 S---GLLKKDPKKRLG  412 (516)
T ss_pred             H---HHhhcChHhhcC
Confidence            4   999999999974

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.97  E-value=2.3e-31  Score=256.78  Aligned_cols=241  Identities=15%  Similarity=0.219  Sum_probs=176.0

Q ss_pred             HHhhccccc--ccccCCCceEEEEEEc-CCcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeE-eC-----
Q 021659           36 KMATDGFHR--IVYTNSHGAAYKARFQ-DGEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFS-TG-----  104 (309)
Q Consensus        36 ~~~~~~~~~--~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~-~~-----  104 (309)
                      .++...|++  .||+|+||.||+++.+ ||+.||+|++.....  .-..+.+|+.+|.+|+|||+|+++..+ ..     
T Consensus       475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~  554 (1351)
T KOG1035|consen  475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT  554 (1351)
T ss_pred             hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence            566777774  7999999999999964 899999999975542  234678999999999999998876210 00     


Q ss_pred             --------------------------------------------------------------------------------
Q 021659          105 --------------------------------------------------------------------------------  104 (309)
Q Consensus       105 --------------------------------------------------------------------------------  104 (309)
                                                                                                      
T Consensus       555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS  634 (1351)
T KOG1035|consen  555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS  634 (1351)
T ss_pred             cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence                                                                                            


Q ss_pred             ----------------------------------CeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhh
Q 021659          105 ----------------------------------RKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYL  150 (309)
Q Consensus       105 ----------------------------------~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~l  150 (309)
                                                        .-.|+=||||+..++.+++..+.... ....+++++.+|+.||.|+
T Consensus       635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEGLaYI  713 (1351)
T KOG1035|consen  635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEGLAYI  713 (1351)
T ss_pred             ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHHHHHH
Confidence                                              00234567887766666665521111 3567899999999999999


Q ss_pred             hhcCCCCeeecccCCCceeeCCCCceeEecccccccc-------------------------cccCCCCCCCCCCCCCC-
Q 021659          151 LLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-------------------------RNYATMPHSSCPEDCST-  204 (309)
Q Consensus       151 h~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-------------------------~~~~~~~~~~~PE~~~~-  204 (309)
                         |+.|+|||||||.||+++.++.|||+|||+++..                         ....||.-|+|||...+ 
T Consensus       714 ---H~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~  790 (1351)
T KOG1035|consen  714 ---HDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDT  790 (1351)
T ss_pred             ---HhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccc
Confidence               8899999999999999999999999999998751                         12368889999996433 


Q ss_pred             ----CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCC
Q 021659          205 ----QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDK  280 (309)
Q Consensus       205 ----~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~  280 (309)
                          ++.+.|+||||++++||+.   ||....+-...+.... .+.++.-      ..+..+....-.+++.++++.||.
T Consensus       791 ~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR-~g~iP~~------~~f~~~~~~~e~slI~~Ll~hdP~  860 (1351)
T KOG1035|consen  791 SSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLR-KGSIPEP------ADFFDPEHPEEASLIRWLLSHDPS  860 (1351)
T ss_pred             ccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcc-cCCCCCC------cccccccchHHHHHHHHHhcCCCc
Confidence                4788999999999999975   4765543333232221 2222111      122233334445777799999999


Q ss_pred             CCCChHHHHH
Q 021659          281 PTISIPQISR  290 (309)
Q Consensus       281 ~Rps~~evl~  290 (309)
                      +||||.|+|+
T Consensus       861 kRPtA~eLL~  870 (1351)
T KOG1035|consen  861 KRPTATELLN  870 (1351)
T ss_pred             cCCCHHHHhh
Confidence            9999999984

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.97  E-value=1.2e-31  Score=225.59  Aligned_cols=184  Identities=20%  Similarity=0.194  Sum_probs=153.7

Q ss_pred             cccccCCCceEEEEEE---cCC--cEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEe--CCeeEEEEee
Q 021659           44 RIVYTNSHGAAYKARF---QDG--EVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFST--GRKRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~---~~~--~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~--~~~~~lv~e~  113 (309)
                      ..||.|.||.||+++-   .+.  ..+|+|.++....   -.....+|+.+++.++|||++.+..++.  +...+++++|
T Consensus        30 g~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fdY  109 (438)
T KOG0666|consen   30 GKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLLFDY  109 (438)
T ss_pred             ceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEehh
Confidence            5799999999999963   232  3789999964322   2457889999999999999999988543  5788899999


Q ss_pred             CCCCCHHHhhcC---CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC----CceeEeccccccc
Q 021659          114 IENGSLKEHLND---PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN----FTAKLSDVGFFNS  186 (309)
Q Consensus       114 ~~~~sL~~~i~~---~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~----~~~kl~dfg~~~~  186 (309)
                      .+. +|.+.|.-   .....++...+..++.||+.|+.||   |++=|+||||||+|||+..+    |.|||+|+|++++
T Consensus       110 AEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YL---H~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~  185 (438)
T KOG0666|consen  110 AEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYL---HSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARL  185 (438)
T ss_pred             hhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHH---hhhheeeccCCcceEEEeccCCccCeeEeecccHHHH
Confidence            998 99998852   2246799999999999999999999   88899999999999999888    9999999999987


Q ss_pred             ccccCC----------CCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCC
Q 021659          187 VRNYAT----------MPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGD  231 (309)
Q Consensus       187 ~~~~~~----------~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~  231 (309)
                      +.+...          |.-|.|||...+   ++.+.|||+.||++.||+|-++.|.+.
T Consensus       186 ~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~  243 (438)
T KOG0666|consen  186 FNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGR  243 (438)
T ss_pred             hhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccch
Confidence            765533          345889997544   589999999999999999999988654

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=1.7e-32  Score=224.79  Aligned_cols=239  Identities=18%  Similarity=0.217  Sum_probs=183.5

Q ss_pred             ccccCCCceEEEEEEc-CCcEEEEEEec--ccccc-HHHHHHHHHHHccCCCCCcceEeeeEeC---------CeeEEEE
Q 021659           45 IVYTNSHGAAYKARFQ-DGEVALVKEIQ--ALNLE-KDAFYREIQLLGRLHHRHLLALQGFSTG---------RKRLLVF  111 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~-~~~~va~K~~~--~~~~~-~~~~~~ei~~l~~l~h~niv~~~~~~~~---------~~~~lv~  111 (309)
                      ++|+|.||.||+++.. .++.||+|++-  +...+ .....+|+.+|+.|+|+|++++++.|..         ...|+||
T Consensus        24 kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf  103 (376)
T KOG0669|consen   24 KIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVF  103 (376)
T ss_pred             hcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeH
Confidence            7999999999999964 46778888762  22222 2345789999999999999999987631         3478999


Q ss_pred             eeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccccc-
Q 021659          112 DNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNY-  190 (309)
Q Consensus       112 e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~-  190 (309)
                      .+|+. +|.-++.+. ...++..+..+++.+++.||.|+   |...|+|||+||+|++|++++.+||+|||+++.++.. 
T Consensus       104 ~~ceh-DLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~i---Hr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~  178 (376)
T KOG0669|consen  104 DFCEH-DLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYI---HRNKILHRDMKAANVLITKDGILKLADFGLARAFSTSK  178 (376)
T ss_pred             HHhhh-hHHHHhcCc-cccccHHHHHHHHHHHHHHHHHH---HHhhHHhhcccHhhEEEcCCceEEeeccccccceeccc
Confidence            99998 998888763 47899999999999999999999   8889999999999999999999999999999655421 


Q ss_pred             ----------CCCCCCCCCCC---CCCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcC--
Q 021659          191 ----------ATMPHSSCPED---CSTQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDL--  255 (309)
Q Consensus       191 ----------~~~~~~~~PE~---~~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l--  255 (309)
                                .-|.-|.+||.   .+.++++.|+|.-||++.||+||++.+.+..+..+........+....-+-|..  
T Consensus       179 n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~  258 (376)
T KOG0669|consen  179 NVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDN  258 (376)
T ss_pred             ccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCccc
Confidence                      23566889995   455689999999999999999999999988877665443333333222111211  


Q ss_pred             ------------------------CCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          256 ------------------------GGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       256 ------------------------~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                                              ..-...+   .-++++..++..||..|+.++++++.
T Consensus       259 lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~---~a~dLle~ll~~DP~kR~~ad~alnh  315 (376)
T KOG0669|consen  259 LPLYQSIELEPLPKGQKRKVKNRLKPYVKDD---EALDLLEKLLKLDPTKRIDADQALNH  315 (376)
T ss_pred             chHHHhccCCCCCcchhhhhhhhcccccCCh---hHHHHHHHHhccCcccCcchHhhhch
Confidence                                    0001122   33445559999999999999998843

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.97  E-value=2.1e-30  Score=251.94  Aligned_cols=138  Identities=17%  Similarity=0.218  Sum_probs=120.7

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEeccccc----cHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCC
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL----EKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIEN  116 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~----~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~  116 (309)
                      .+.||+|+||.||+|... +++.||+|++.....    ....+..|+.+++.++|+||+++++++. ....|+||||+.+
T Consensus         9 ~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g   88 (669)
T cd05610           9 VKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIG   88 (669)
T ss_pred             EEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCC
Confidence            368999999999999975 688999999864322    1356788999999999999999998665 4778999999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccc
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFN  185 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~  185 (309)
                      ++|.+++..  ...+++..++.++.|++.||.||   |..+|+|+||||+|||++.++.+||+|||+++
T Consensus        89 ~~L~~li~~--~~~l~~~~~~~i~~qil~aL~yL---H~~gIiHrDLKP~NILl~~~g~vkL~DFGls~  152 (669)
T cd05610          89 GDVKSLLHI--YGYFDEEMAVKYISEVALALDYL---HRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK  152 (669)
T ss_pred             CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence            999999976  46788999999999999999999   67799999999999999999999999999864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.97  E-value=3.5e-31  Score=236.34  Aligned_cols=232  Identities=19%  Similarity=0.284  Sum_probs=187.2

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccc---cccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQAL---NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~---~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~s  118 (309)
                      +.||.|-||+||-|+. ++|+.||+|++.+.   ......+.+|+.+|+++.||.|+.+...+.. +..++|||-+.| +
T Consensus       570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G-D  648 (888)
T KOG4236|consen  570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG-D  648 (888)
T ss_pred             hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc-h
Confidence            5899999999999997 56999999999432   2334578999999999999999999997754 778899999865 7


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC---CceeEeccccccccc------c
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN---FTAKLSDVGFFNSVR------N  189 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~---~~~kl~dfg~~~~~~------~  189 (309)
                      +.+.|-....+.+++..-..++.||+.||.||   |-++|+|+||||+|||+.+.   ..+||||||++++.+      .
T Consensus       649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~L---H~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrs  725 (888)
T KOG4236|consen  649 MLEMILSSEKGRLPERITKFLVTQILVALRYL---HFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRS  725 (888)
T ss_pred             HHHHHHHhhcccchHHHHHHHHHHHHHHHHHh---hhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhh
Confidence            77777665678899999999999999999999   88899999999999999765   569999999998765      3


Q ss_pred             cCCCCCCCCCCC--CCCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          190 YATMPHSSCPED--CSTQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       190 ~~~~~~~~~PE~--~~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ..||+.|.|||.  ..+++++-|+||.|+++|.-++|..||..+.++...++.+..      +..+..    +.+-....
T Consensus       726 VVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaF------MyPp~P----W~eis~~A  795 (888)
T KOG4236|consen  726 VVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAF------MYPPNP----WSEISPEA  795 (888)
T ss_pred             hcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhcccc------ccCCCc----hhhcCHHH
Confidence            589999999996  455688999999999999999999999988887766654321      122222    22333445


Q ss_pred             HHHHHHccCCCCCCCCChHHHH
Q 021659          268 LAVARLCIKTKDKPTISIPQIS  289 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~evl  289 (309)
                      ++++...|+..=..|-|+..-+
T Consensus       796 idlIn~LLqVkm~kRysvdk~l  817 (888)
T KOG4236|consen  796 IDLINNLLQVKMRKRYSVDKSL  817 (888)
T ss_pred             HHHHHHHHHHHHHHhcchHhhc
Confidence            5666688888888888876543

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.97  E-value=3.6e-31  Score=228.25  Aligned_cols=243  Identities=15%  Similarity=0.192  Sum_probs=187.8

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccccHHHHHHHHHHHccCC-C-C----CcceEeeeEe-CCeeEEEEeeCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLEKDAFYREIQLLGRLH-H-R----HLLALQGFST-GRKRLLVFDNIE  115 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~-h-~----niv~~~~~~~-~~~~~lv~e~~~  115 (309)
                      +.+|+|.||.|-.+... .+..||+|+++.-..-.+..+-|+++|+++. + |    -++.+.++++ .++.++|+|.+ 
T Consensus        95 ~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfell-  173 (415)
T KOG0671|consen   95 DLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELL-  173 (415)
T ss_pred             hhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEecc-
Confidence            58999999999999863 4789999999877777778889999999994 2 2    2455555554 47889999998 


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC--------------------Cc
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN--------------------FT  175 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~--------------------~~  175 (309)
                      |.|+.+.+..++..+++...+..++.|+++++.+|   |+.+++|-||||.||++.+.                    ..
T Consensus       174 G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fL---h~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~  250 (415)
T KOG0671|consen  174 GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFL---HDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTA  250 (415)
T ss_pred             ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHH---HhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcc
Confidence            33999999988889999999999999999999999   88999999999999998432                    34


Q ss_pred             eeEeccccccccccc----CCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccc
Q 021659          176 AKLSDVGFFNSVRNY----ATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHR  249 (309)
Q Consensus       176 ~kl~dfg~~~~~~~~----~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~  249 (309)
                      ++++|||.+......    +.|..|.|||...  +.+..+||||+||||+|+.||...|....+.-.++-....-++++.
T Consensus       251 I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~  330 (415)
T KOG0671|consen  251 IKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPS  330 (415)
T ss_pred             eEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcH
Confidence            799999999765443    5778999999754  4588999999999999999999999876644322111111111110


Q ss_pred             ------------------------------cccCcCC----CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          250 ------------------------------MIDPDLG----GSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       250 ------------------------------~~~~~l~----~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                                                    ..++..+    ....+.+...|.+|+.+||.+||.+|+|+.|++.
T Consensus       331 ~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~  405 (415)
T KOG0671|consen  331 RMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALS  405 (415)
T ss_pred             HHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence                                          0011100    1223456788999999999999999999999874

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=2.7e-30  Score=247.89  Aligned_cols=242  Identities=19%  Similarity=0.299  Sum_probs=187.7

Q ss_pred             cccccccCCCceEEEEEEc----C----CcEEEEEEeccccc--cHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEE
Q 021659           42 FHRIVYTNSHGAAYKARFQ----D----GEVALVKEIQALNL--EKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLL  109 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~----~----~~~va~K~~~~~~~--~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~l  109 (309)
                      +.+.+|+|.||.|++|...    .    ...||+|.+.....  +.+.+..|+++++.+ .|+||+.++|+|+. ...++
T Consensus       300 ~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~  379 (609)
T KOG0200|consen  300 LGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYV  379 (609)
T ss_pred             ccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEE
Confidence            4458999999999999842    1    45689999864333  456899999999999 69999999999976 67789


Q ss_pred             EEeeCCCCCHHHhhcCCC------------C--CCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCc
Q 021659          110 VFDNIENGSLKEHLNDPL------------K--TPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFT  175 (309)
Q Consensus       110 v~e~~~~~sL~~~i~~~~------------~--~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~  175 (309)
                      |+||+..|+|.+++....            .  ..++....+.++.||+.|++||   ++.+.+||||-.+|||++.+..
T Consensus       380 v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L---~~~~~vHRDLAaRNVLi~~~~~  456 (609)
T KOG0200|consen  380 IVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYL---ASVPCVHRDLAARNVLITKNKV  456 (609)
T ss_pred             EEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHH---hhCCccchhhhhhhEEecCCCE
Confidence            999999999999997532            0  2388899999999999999999   8899999999999999999999


Q ss_pred             eeEecccccccccc---c-----C--CCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhc
Q 021659          176 AKLSDVGFFNSVRN---Y-----A--TMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESS  242 (309)
Q Consensus       176 ~kl~dfg~~~~~~~---~-----~--~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~  242 (309)
                      +||+|||+++....   +     .  -...|+|||...  .++.++||||||+++||++| |..||.+-...... .+..
T Consensus       457 ~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l-~~~l  535 (609)
T KOG0200|consen  457 IKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEEL-LEFL  535 (609)
T ss_pred             EEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHH-HHHH
Confidence            99999999974221   1     1  124599999654  45889999999999999998 88999863212222 2222


Q ss_pred             ccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhh
Q 021659          243 ISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEV  296 (309)
Q Consensus       243 ~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~  296 (309)
                      ..+...+  .|       .....++-+++..||+.+|++||+..++.+.++..+
T Consensus       536 ~~G~r~~--~P-------~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l  580 (609)
T KOG0200|consen  536 KEGNRME--QP-------EHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL  580 (609)
T ss_pred             hcCCCCC--CC-------CCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence            2222111  11       111344556777999999999999999999998853

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.3e-30  Score=228.58  Aligned_cols=237  Identities=19%  Similarity=0.220  Sum_probs=181.2

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccccH--------HHHHHHHHHHccCCCCCcceEeeeEe-C-CeeEEEEe
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEK--------DAFYREIQLLGRLHHRHLLALQGFST-G-RKRLLVFD  112 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~--------~~~~~ei~~l~~l~h~niv~~~~~~~-~-~~~~lv~e  112 (309)
                      .+||.|+|+.||++.. ..++.||+|+-+.....+        +...+|..+.+.|.||.||++|+++. + ..++-|+|
T Consensus       469 hLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLE  548 (775)
T KOG1151|consen  469 HLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLE  548 (775)
T ss_pred             HHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeeee
Confidence            3699999999999984 678999999765433222        24578999999999999999999764 3 56779999


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC---CCceeEeccccccccc-
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE---NFTAKLSDVGFFNSVR-  188 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~---~~~~kl~dfg~~~~~~-  188 (309)
                      ||+|.+|+=|++.  ...+++.++..|+.||+.||.||.. -+.+|||=||||.|||+..   .|.+||.|||+++++. 
T Consensus       549 YceGNDLDFYLKQ--hklmSEKEARSIiMQiVnAL~YLNE-ikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdd  625 (775)
T KOG1151|consen  549 YCEGNDLDFYLKQ--HKLMSEKEARSIIMQIVNALKYLNE-IKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDD  625 (775)
T ss_pred             ecCCCchhHHHHh--hhhhhHHHHHHHHHHHHHHHHHHhc-cCCCeeeeccCCccEEEecCcccceeEeeecchhhhccC
Confidence            9999999999987  7889999999999999999999954 4679999999999999843   4789999999997653 


Q ss_pred             -------------ccCCCCCCCCCCCCCCC------CCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccc
Q 021659          189 -------------NYATMPHSSCPEDCSTQ------DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHR  249 (309)
Q Consensus       189 -------------~~~~~~~~~~PE~~~~~------~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~  249 (309)
                                   ...||.-|.+||.+.-.      +.+.||||.|+++|+++.|+.||..+......+++-..-....-
T Consensus       626 dSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEV  705 (775)
T KOG1151|consen  626 DSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEV  705 (775)
T ss_pred             CccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceec
Confidence                         34678889999975432      67899999999999999999999877554443332211111000


Q ss_pred             cccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHH
Q 021659          250 MIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQIS  289 (309)
Q Consensus       250 ~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl  289 (309)
                      -+.+.  .. -+.+.+   .+|.+||.+.-++|....++.
T Consensus       706 qFP~K--Pv-VsseAk---aFIRRCLaYRKeDR~DV~qLA  739 (775)
T KOG1151|consen  706 QFPPK--PV-VSSEAK---AFIRRCLAYRKEDRIDVQQLA  739 (775)
T ss_pred             cCCCC--Cc-cCHHHH---HHHHHHHHhhhhhhhhHHHHc
Confidence            01111  11 122344   455599999999998877765

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.97  E-value=1.3e-29  Score=241.08  Aligned_cols=244  Identities=15%  Similarity=0.203  Sum_probs=154.5

Q ss_pred             cccc--cccccCCCceEEEEEEc-C----CcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEee-e------EeCC
Q 021659           40 DGFH--RIVYTNSHGAAYKARFQ-D----GEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQG-F------STGR  105 (309)
Q Consensus        40 ~~~~--~~lg~G~~~~v~~~~~~-~----~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~-~------~~~~  105 (309)
                      ++|.  +.||+|+||.||+|... +    +..||+|.+.... ..+....+  .+....+.++..+.. +      ..+.
T Consensus       132 ~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~-~~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~~  208 (566)
T PLN03225        132 DDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG-AVEIWMNE--RVRRACPNSCADFVYGFLEPVSSKKED  208 (566)
T ss_pred             CCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc-hhHHHHHH--HHHhhchhhHHHHHHhhhcccccccCC
Confidence            4444  58999999999999974 4    6889999875322 11222221  122222233332222 1      1235


Q ss_pred             eeEEEEeeCCCCCHHHhhcCCCCC------------------CCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCc
Q 021659          106 KRLLVFDNIENGSLKEHLNDPLKT------------------PLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSS  167 (309)
Q Consensus       106 ~~~lv~e~~~~~sL~~~i~~~~~~------------------~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~n  167 (309)
                      ..++|+||+.+++|.+++......                  ......+..++.|++.||.||   |+.+|+||||||+|
T Consensus       209 ~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yL---H~~gIiHRDLKP~N  285 (566)
T PLN03225        209 EYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGL---HSTGIVHRDVKPQN  285 (566)
T ss_pred             ceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHH---HHCCEEeCcCCHHH
Confidence            678999999999999988652110                  011234567999999999999   77899999999999


Q ss_pred             eeeCC-CCceeEeccccccccc--------ccCCCCCCCCCCCCCC------------------------CCCCCcEeeh
Q 021659          168 IMLDE-NFTAKLSDVGFFNSVR--------NYATMPHSSCPEDCST------------------------QDCSNIIFQL  214 (309)
Q Consensus       168 ill~~-~~~~kl~dfg~~~~~~--------~~~~~~~~~~PE~~~~------------------------~~~~~Dv~sl  214 (309)
                      ||++. ++.+||+|||++....        ...+++.|+|||.+..                        ...++|||||
T Consensus       286 ILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSl  365 (566)
T PLN03225        286 IIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSA  365 (566)
T ss_pred             EEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHH
Confidence            99986 5789999999986432        3456789999994321                        1234599999


Q ss_pred             hhHHHHHHhCCCCCCCCccHHHHHHHhcccc-ccc---ccccCcC----CCCCC--HHHHHHHHHHHHHccCCCCCCCCC
Q 021659          215 GVLILELVTGQSPEEGDVDLIQWIQESSISS-SIH---RMIDPDL----GGSYD--SKELKKLLAVARLCIKTKDKPTIS  284 (309)
Q Consensus       215 G~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~-~~~---~~~~~~l----~~~~~--~~~~~~l~~l~~~cl~~dp~~Rps  284 (309)
                      ||++|||+++..++...  ..+........+ ...   ....+..    ...+.  ........+++.+||++||++|||
T Consensus       366 GviL~el~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~t  443 (566)
T PLN03225        366 GLIFLQMAFPNLRSDSN--LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRIS  443 (566)
T ss_pred             HHHHHHHHhCcCCCchH--HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCC
Confidence            99999999977665432  222211111100 000   0111110    00000  001223346777999999999999


Q ss_pred             hHHHHHH
Q 021659          285 IPQISRY  291 (309)
Q Consensus       285 ~~evl~~  291 (309)
                      +.++++.
T Consensus       444 a~e~L~H  450 (566)
T PLN03225        444 AKAALAH  450 (566)
T ss_pred             HHHHhCC
Confidence            9999853

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.97  E-value=5.1e-30  Score=204.55  Aligned_cols=193  Identities=19%  Similarity=0.246  Sum_probs=157.8

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecc--ccccHHHHHHHHHHHccC-CCCCcceEee-eEeCCeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQA--LNLEKDAFYREIQLLGRL-HHRHLLALQG-FSTGRKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~--~~~~~~~~~~ei~~l~~l-~h~niv~~~~-~~~~~~~~lv~e~~~~~s  118 (309)
                      ..||.|++|.|-+.++ .+|...|+|.+..  ....+++..+|+++..+- ..|.++.++| ++.....++.||.|+. |
T Consensus        52 ~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~t-S  130 (282)
T KOG0984|consen   52 EELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDT-S  130 (282)
T ss_pred             hhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhh-h
Confidence            4699999999988885 6799999999953  334455677888776555 6899999999 5566888999999987 8


Q ss_pred             HHHhhcC--CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc------c
Q 021659          119 LKEHLND--PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN------Y  190 (309)
Q Consensus       119 L~~~i~~--~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~------~  190 (309)
                      |+.+-..  ..++.+++...-+++.++..||.|||  .+..++|||+||+|||++.+|++|+||||++..+.+      .
T Consensus       131 ldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~--~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~d  208 (282)
T KOG0984|consen  131 LDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLH--SKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTMD  208 (282)
T ss_pred             HHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHH--HHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHHHh
Confidence            8765532  23688999999999999999999998  568899999999999999999999999999875542      3


Q ss_pred             CCCCCCCCCCCC------CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHH
Q 021659          191 ATMPHSSCPEDC------STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQ  239 (309)
Q Consensus       191 ~~~~~~~~PE~~------~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~  239 (309)
                      .|-..|+|||..      .+++-++||||||++++||.+++.||.......+.+.
T Consensus       209 aGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLk  263 (282)
T KOG0984|consen  209 AGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLK  263 (282)
T ss_pred             cCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHH
Confidence            566889999963      2456789999999999999999999987655444443

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.96  E-value=3.2e-30  Score=208.79  Aligned_cols=237  Identities=15%  Similarity=0.225  Sum_probs=178.6

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccCC-CCCcceEeeeEeC---CeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRLH-HRHLLALQGFSTG---RKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~-h~niv~~~~~~~~---~~~~lv~e~~~~~s  118 (309)
                      +++|.|.++.||.|.. .+++.+++|+++...  .+.+.+|+.+|+.|+ ||||+.+++...+   ....+|+||+++.+
T Consensus        44 rk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk--kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~D  121 (338)
T KOG0668|consen   44 RKVGRGKYSEVFEGINITNNEKCVIKILKPVK--KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTD  121 (338)
T ss_pred             HHHcCccHhhHhcccccCCCceEEEeeechHH--HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhcccc
Confidence            5799999999999984 667889999986433  567999999999997 9999999997754   44569999999988


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC-CceeEeccccccccccc------C
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN-FTAKLSDVGFFNSVRNY------A  191 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~-~~~kl~dfg~~~~~~~~------~  191 (309)
                      ...+-     ++++...+..++.++++||.||   |+.||+|||+||.|++++.. -.++++|+|+|-+....      .
T Consensus       122 fk~ly-----~tl~d~dIryY~~elLkALdyC---HS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVRV  193 (338)
T KOG0668|consen  122 FKQLY-----PTLTDYDIRYYIYELLKALDYC---HSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV  193 (338)
T ss_pred             HHHHh-----hhhchhhHHHHHHHHHHHHhHH---HhcCcccccCCcceeeechhhceeeeeecchHhhcCCCceeeeee
Confidence            87774     5688889999999999999999   88999999999999999865 56999999998655432      3


Q ss_pred             CCCCCCCCCC---CCCCCCCCcEeehhhHHHHHHhCCCCCC-CCccHHHHHHHhccccc--c-------cccccCcCCC-
Q 021659          192 TMPHSSCPED---CSTQDCSNIIFQLGVLILELVTGQSPEE-GDVDLIQWIQESSISSS--I-------HRMIDPDLGG-  257 (309)
Q Consensus       192 ~~~~~~~PE~---~~~~~~~~Dv~slG~~l~~l~tg~~p~~-~~~~~~~~~~~~~~~~~--~-------~~~~~~~l~~-  257 (309)
                      .+..|-.||.   ++.++.+-|+|||||++..|+..+.||- +..+..|.+.....-+.  +       .--++|.... 
T Consensus       194 ASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i  273 (338)
T KOG0668|consen  194 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDI  273 (338)
T ss_pred             ehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhH
Confidence            4556778996   4456899999999999999999999864 44555555432211110  0       0002222110 


Q ss_pred             -------CC--------CHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          258 -------SY--------DSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       258 -------~~--------~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                             .+        ..-...+.++++...|.+|..+|||+.|...
T Consensus       274 ~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~  321 (338)
T KOG0668|consen  274 LGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA  321 (338)
T ss_pred             hhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence                   00        0001244555666999999999999999763

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.96  E-value=7.2e-29  Score=231.12  Aligned_cols=250  Identities=14%  Similarity=0.131  Sum_probs=164.5

Q ss_pred             hcccc--cccccCCCceEEEEEE-----------------cCCcEEEEEEecccccc-HHH--------------HHHHH
Q 021659           39 TDGFH--RIVYTNSHGAAYKARF-----------------QDGEVALVKEIQALNLE-KDA--------------FYREI   84 (309)
Q Consensus        39 ~~~~~--~~lg~G~~~~v~~~~~-----------------~~~~~va~K~~~~~~~~-~~~--------------~~~ei   84 (309)
                      .++|.  ++||+|+||.||+|..                 .+++.||+|.+...... .++              ...|+
T Consensus       144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~  223 (507)
T PLN03224        144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA  223 (507)
T ss_pred             ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence            44555  5899999999999963                 23567999998543221 122              33466


Q ss_pred             HHHccCCCCCc-----ceEeeeEe---------CCeeEEEEeeCCCCCHHHhhcCCC----------------------C
Q 021659           85 QLLGRLHHRHL-----LALQGFST---------GRKRLLVFDNIENGSLKEHLNDPL----------------------K  128 (309)
Q Consensus        85 ~~l~~l~h~ni-----v~~~~~~~---------~~~~~lv~e~~~~~sL~~~i~~~~----------------------~  128 (309)
                      ..+.+++|.++     +.++++|.         ....++|+||+++++|.+++....                      .
T Consensus       224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~  303 (507)
T PLN03224        224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ  303 (507)
T ss_pred             HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence            67777766554     56666553         245789999999999999886421                      1


Q ss_pred             CCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc--------cCCCCCCCCCC
Q 021659          129 TPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN--------YATMPHSSCPE  200 (309)
Q Consensus       129 ~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~--------~~~~~~~~~PE  200 (309)
                      ..+++..+..++.+++.||.||   |+.+++||||||+||+++.++.+||+|||++.....        ...++.|++||
T Consensus       304 ~~~~~~~~~~i~~ql~~aL~~l---H~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE  380 (507)
T PLN03224        304 DKRDINVIKGVMRQVLTGLRKL---HRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPE  380 (507)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChh
Confidence            2345678889999999999999   778999999999999999999999999999864321        12367899999


Q ss_pred             CCCCC------------------------CCCCcEeehhhHHHHHHhCCC-CCCCCccHHHHHHHhccc-ccccccccCc
Q 021659          201 DCSTQ------------------------DCSNIIFQLGVLILELVTGQS-PEEGDVDLIQWIQESSIS-SSIHRMIDPD  254 (309)
Q Consensus       201 ~~~~~------------------------~~~~Dv~slG~~l~~l~tg~~-p~~~~~~~~~~~~~~~~~-~~~~~~~~~~  254 (309)
                      .....                        ....|+||+||++++|+++.. |+................ ..........
T Consensus       381 ~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~  460 (507)
T PLN03224        381 ELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQK  460 (507)
T ss_pred             hhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccC
Confidence            64321                        124699999999999999885 664322111111110000 0000000011


Q ss_pred             CCCCCCHHHHHHHHHHHHHccCCCC---CCCCChHHHHHH
Q 021659          255 LGGSYDSKELKKLLAVARLCIKTKD---KPTISIPQISRY  291 (309)
Q Consensus       255 l~~~~~~~~~~~l~~l~~~cl~~dp---~~Rps~~evl~~  291 (309)
                      ..-+..........+++.++|..+|   .+|+|+.|+++.
T Consensus       461 ~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H  500 (507)
T PLN03224        461 YDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH  500 (507)
T ss_pred             CCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence            1111111123445566669998765   689999999853

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1e-29  Score=243.76  Aligned_cols=193  Identities=20%  Similarity=0.261  Sum_probs=162.1

Q ss_pred             HHHHhhcccc--cccccCCCceEEEEEE-cCCcEEEEEEeccc----cccHHHHHHHHHHHccCCCCCcceEee-eEeCC
Q 021659           34 DIKMATDGFH--RIVYTNSHGAAYKARF-QDGEVALVKEIQAL----NLEKDAFYREIQLLGRLHHRHLLALQG-FSTGR  105 (309)
Q Consensus        34 ~i~~~~~~~~--~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~----~~~~~~~~~ei~~l~~l~h~niv~~~~-~~~~~  105 (309)
                      +++.....|.  +.||+|+||.|..++. ..+++||||++..-    ..+..-|..|-.+|..=+.+=|+++.- |.++.
T Consensus        69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~  148 (1317)
T KOG0612|consen   69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDER  148 (1317)
T ss_pred             HHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCcc
Confidence            3444445554  5899999999999997 45889999998542    233455778888887777888888755 66668


Q ss_pred             eeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccc
Q 021659          106 KRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFN  185 (309)
Q Consensus       106 ~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~  185 (309)
                      +.|+||+|++||+|-.++.+  ...+++.-+.+++..++-||.-+   |+.|+|||||||+|+|+|..|++||+|||.+-
T Consensus       149 ~LYlVMdY~pGGDlltLlSk--~~~~pE~~ArFY~aEiVlAldsl---H~mgyVHRDiKPDNvLld~~GHikLADFGsCl  223 (1317)
T KOG0612|consen  149 YLYLVMDYMPGGDLLTLLSK--FDRLPEDWARFYTAEIVLALDSL---HSMGYVHRDIKPDNVLLDKSGHIKLADFGSCL  223 (1317)
T ss_pred             ceEEEEecccCchHHHHHhh--cCCChHHHHHHHHHHHHHHHHHH---HhccceeccCCcceeEecccCcEeeccchhHH
Confidence            99999999999999999987  45799999999999999999999   88999999999999999999999999999875


Q ss_pred             cc--------cccCCCCCCCCCCCC-------CCCCCCCcEeehhhHHHHHHhCCCCCCCC
Q 021659          186 SV--------RNYATMPHSSCPEDC-------STQDCSNIIFQLGVLILELVTGQSPEEGD  231 (309)
Q Consensus       186 ~~--------~~~~~~~~~~~PE~~-------~~~~~~~Dv~slG~~l~~l~tg~~p~~~~  231 (309)
                      .+        ...+|||-|.+||..       ..+++.+|-||+|+++|||+.|.-||..+
T Consensus       224 km~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad  284 (1317)
T KOG0612|consen  224 KMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD  284 (1317)
T ss_pred             hcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH
Confidence            44        356899999999952       33578899999999999999999999754

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.4e-30  Score=231.49  Aligned_cols=225  Identities=18%  Similarity=0.244  Sum_probs=181.2

Q ss_pred             ccccCCCceEEEEEEcCCc-EEEEEEeccc----cccHHHHHHHHHHHccCCCCCcceEee-eEeCCeeEEEEeeCCCCC
Q 021659           45 IVYTNSHGAAYKARFQDGE-VALVKEIQAL----NLEKDAFYREIQLLGRLHHRHLLALQG-FSTGRKRLLVFDNIENGS  118 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~~~~-~va~K~~~~~----~~~~~~~~~ei~~l~~l~h~niv~~~~-~~~~~~~~lv~e~~~~~s  118 (309)
                      -||-|+||.|-+++..+.. .+|+|.+++.    ....+.+..|-.++...+.|.|+++|- |-++...|++||-|-||.
T Consensus       427 TLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGGE  506 (732)
T KOG0614|consen  427 TLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGGE  506 (732)
T ss_pred             hcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCch
Confidence            4999999999999975543 4788877432    223456889999999999999999998 445578899999999999


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------ccCC
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------NYAT  192 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------~~~~  192 (309)
                      |+..+.+  .+.|+..+...++.-++.|++||   |.++|+.|||||.|.+++.+|.+||.|||+++...      +..|
T Consensus       507 lWTiLrd--Rg~Fdd~tarF~~acv~EAfeYL---H~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwTFcG  581 (732)
T KOG0614|consen  507 LWTILRD--RGSFDDYTARFYVACVLEAFEYL---HRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWTFCG  581 (732)
T ss_pred             hhhhhhh--cCCcccchhhhhHHHHHHHHHHH---HhcCceeccCChhheeeccCCceEEeehhhHHHhccCCceeeecC
Confidence            9999988  78999999999999999999999   88899999999999999999999999999998765      3589


Q ss_pred             CCCCCCCCC--CCCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          193 MPHSSCPED--CSTQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       193 ~~~~~~PE~--~~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      |+.|.|||.  ..+.+.++|.||||+++|||++|.+||.+-..+..+-.....- ...++  |       ..-.+.-..+
T Consensus       582 TpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGi-d~i~~--P-------r~I~k~a~~L  651 (732)
T KOG0614|consen  582 TPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGI-DKIEF--P-------RRITKTATDL  651 (732)
T ss_pred             CcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhh-hhhhc--c-------cccchhHHHH
Confidence            999999996  4556899999999999999999999999876665443322111 11111  1       1112344456


Q ss_pred             HHHccCCCCCCCCC
Q 021659          271 ARLCIKTKDKPTIS  284 (309)
Q Consensus       271 ~~~cl~~dp~~Rps  284 (309)
                      +.+.+..+|.+|..
T Consensus       652 ik~LCr~~P~ERLG  665 (732)
T KOG0614|consen  652 IKKLCRDNPTERLG  665 (732)
T ss_pred             HHHHHhcCcHhhhc
Confidence            66888899999986

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=4.6e-30  Score=223.42  Aligned_cols=235  Identities=19%  Similarity=0.278  Sum_probs=179.2

Q ss_pred             HHHHhhcccccccccCCCceEEEEEEc-CCcEEEEEEeccccc----cHHHHHHHHHHHccC-CCCCcceEeeeE-eCCe
Q 021659           34 DIKMATDGFHRIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL----EKDAFYREIQLLGRL-HHRHLLALQGFS-TGRK  106 (309)
Q Consensus        34 ~i~~~~~~~~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~----~~~~~~~ei~~l~~l-~h~niv~~~~~~-~~~~  106 (309)
                      -|....-+|-..||+|+||+|.++.-+ +.+.+|+|+++.+-.    +.+--+.|-++|.-. +-|.++++..++ +-..
T Consensus       345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDR  424 (683)
T KOG0696|consen  345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDR  424 (683)
T ss_pred             ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhh
Confidence            344445567789999999999999854 467899999864322    122234566666555 467788888755 4478


Q ss_pred             eEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccc
Q 021659          107 RLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNS  186 (309)
Q Consensus       107 ~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~  186 (309)
                      .|+||||+.||+|--.++.  -+.+-++.+..++..|+-||-+|   |++||+.||||.+|||++.+|.+||+|||+++.
T Consensus       425 LyFVMEyvnGGDLMyhiQQ--~GkFKEp~AvFYAaEiaigLFFL---h~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKE  499 (683)
T KOG0696|consen  425 LYFVMEYVNGGDLMYHIQQ--VGKFKEPVAVFYAAEIAIGLFFL---HSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE  499 (683)
T ss_pred             eeeEEEEecCchhhhHHHH--hcccCCchhhhhhHHHHHHhhhh---hcCCeeeeeccccceEeccCCceEeeecccccc
Confidence            8999999999999888876  57788899999999999999999   999999999999999999999999999999863


Q ss_pred             -------ccccCCCCCCCCCCC--CCCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCC
Q 021659          187 -------VRNYATMPHSSCPED--CSTQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGG  257 (309)
Q Consensus       187 -------~~~~~~~~~~~~PE~--~~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  257 (309)
                             .....||+.|.|||+  +..++.++|-||+|++||||+.|++||.++.+-. ..+.         +.+..+  
T Consensus       500 ni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~e-lF~a---------I~ehnv--  567 (683)
T KOG0696|consen  500 NIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE-LFQA---------IMEHNV--  567 (683)
T ss_pred             cccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHH---------HHHccC--
Confidence                   245689999999996  5667889999999999999999999998764321 1111         111111  


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCCh
Q 021659          258 SYDSKELKKLLAVARLCIKTKDKPTISI  285 (309)
Q Consensus       258 ~~~~~~~~~l~~l~~~cl~~dp~~Rps~  285 (309)
                      .++-..+++...++...+.++|..|...
T Consensus       568 syPKslSkEAv~ickg~ltK~P~kRLGc  595 (683)
T KOG0696|consen  568 SYPKSLSKEAVAICKGLLTKHPGKRLGC  595 (683)
T ss_pred             cCcccccHHHHHHHHHHhhcCCccccCC
Confidence            1111223445556668899999988754

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.96  E-value=5.6e-28  Score=200.83  Aligned_cols=200  Identities=26%  Similarity=0.358  Sum_probs=170.7

Q ss_pred             cccCCCceEEEEEEcC-CcEEEEEEecccccc--HHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHHH
Q 021659           46 VYTNSHGAAYKARFQD-GEVALVKEIQALNLE--KDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLKE  121 (309)
Q Consensus        46 lg~G~~~~v~~~~~~~-~~~va~K~~~~~~~~--~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~~  121 (309)
                      ||+|.+|.||++...+ ++.+++|.+......  .+.+.+|++.++.++|++++++++++.. ...++++|++++++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            6899999999999754 889999998655442  4679999999999999999999997765 67789999999899999


Q ss_pred             hhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC-CCceeEecccccccccc-------cCCC
Q 021659          122 HLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE-NFTAKLSDVGFFNSVRN-------YATM  193 (309)
Q Consensus       122 ~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~-~~~~kl~dfg~~~~~~~-------~~~~  193 (309)
                      ++.... ..+++..+..++.++++++.+|   |+.+++|+||+|.||+++. ++.++++|||.+.....       ..+.
T Consensus        81 ~~~~~~-~~~~~~~~~~~~~~l~~~l~~l---h~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~  156 (215)
T cd00180          81 LLKENE-GKLSEDEILRILLQILEGLEYL---HSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGT  156 (215)
T ss_pred             HHHhcc-CCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCC
Confidence            987521 4689999999999999999999   7779999999999999998 89999999999875543       3466


Q ss_pred             CCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          194 PHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       194 ~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      ..|.+||...   ..+.++|+|++|++++++                                           ..+.++
T Consensus       157 ~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------------~~~~~~  193 (215)
T cd00180         157 PAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------------PELKDL  193 (215)
T ss_pred             CCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------------HHHHHH
Confidence            7889999643   346789999999999999                                           345577


Q ss_pred             HHHccCCCCCCCCChHHHHHHH
Q 021659          271 ARLCIKTKDKPTISIPQISRYL  292 (309)
Q Consensus       271 ~~~cl~~dp~~Rps~~evl~~L  292 (309)
                      +.+|+..+|+.||++.++++.+
T Consensus       194 l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         194 IRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             HHHHhhCCcccCcCHHHHhhCC
Confidence            7799999999999999998653

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.96  E-value=1.6e-29  Score=236.27  Aligned_cols=228  Identities=18%  Similarity=0.220  Sum_probs=167.3

Q ss_pred             cccccCCCce-EEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGA-AYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~-v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      +.+|.|+.|+ ||+|.+ +++.||+|.+-..-  ..-..+||..|+.- .|||||++++.-.+ ...|+..|.|.- +|.
T Consensus       515 eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~--~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~-sL~  590 (903)
T KOG1027|consen  515 EILGYGSNGTVVFRGVY-EGREVAVKRLLEEF--FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC-SLQ  590 (903)
T ss_pred             HHcccCCCCcEEEEEee-CCceehHHHHhhHh--HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh-hHH
Confidence            4688998854 699998 57899999884322  23567899999887 59999999987654 678899999966 999


Q ss_pred             HhhcCC--CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC-----CceeEeccccccccc-----
Q 021659          121 EHLNDP--LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN-----FTAKLSDVGFFNSVR-----  188 (309)
Q Consensus       121 ~~i~~~--~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~-----~~~kl~dfg~~~~~~-----  188 (309)
                      +++...  ............++.|+++||++|   |+.+|+||||||+||||+..     .+++|+|||+++...     
T Consensus       591 dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHL---Hsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS  667 (903)
T KOG1027|consen  591 DLIESSGLDVEMQSDIDPISVLSQIASGLAHL---HSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSS  667 (903)
T ss_pred             HHHhccccchhhcccccHHHHHHHHHHHHHHH---HhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcch
Confidence            999862  111111134577889999999999   77899999999999999762     468999999997553     


Q ss_pred             -----ccCCCCCCCCCCCCCCC--CCCCcEeehhhHHHHHHhC-CCCCCCCccHHHHHHHhcccccccccccCcCCCCCC
Q 021659          189 -----NYATMPHSSCPEDCSTQ--DCSNIIFQLGVLILELVTG-QSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYD  260 (309)
Q Consensus       189 -----~~~~~~~~~~PE~~~~~--~~~~Dv~slG~~l~~l~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  260 (309)
                           ...||.+|.|||.....  +.++|+|||||++|+.++| ..||.+...-..-+...  ...+. .+.+     ..
T Consensus       668 ~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~--~~~L~-~L~~-----~~  739 (903)
T KOG1027|consen  668 FSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTG--NYTLV-HLEP-----LP  739 (903)
T ss_pred             hhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcC--cccee-eecc-----Cc
Confidence                 34788999999975443  6789999999999999985 89998653221111110  00000 0001     01


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCCChHHHH
Q 021659          261 SKELKKLLAVARLCIKTKDKPTISIPQIS  289 (309)
Q Consensus       261 ~~~~~~l~~l~~~cl~~dp~~Rps~~evl  289 (309)
                      ..+.++   ||.+|++++|..||++.+|+
T Consensus       740 d~eA~d---LI~~ml~~dP~~RPsa~~VL  765 (903)
T KOG1027|consen  740 DCEAKD---LISRMLNPDPQLRPSATDVL  765 (903)
T ss_pred             hHHHHH---HHHHhcCCCcccCCCHHHHh
Confidence            114444   45599999999999999998

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=2.7e-30  Score=214.25  Aligned_cols=243  Identities=14%  Similarity=0.204  Sum_probs=181.1

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc---ccHHHHHHHHHHHccCCCCCcceEeeeEeC------CeeEEEEee
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN---LEKDAFYREIQLLGRLHHRHLLALQGFSTG------RKRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~---~~~~~~~~ei~~l~~l~h~niv~~~~~~~~------~~~~lv~e~  113 (309)
                      +-||-|+||.||.+.. ++|+.|++|++.+..   ...+++.+|++.|.-++|.|++..++....      ...|+++|.
T Consensus        59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TEL  138 (449)
T KOG0664|consen   59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTEL  138 (449)
T ss_pred             CcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHH
Confidence            4699999999999986 689999999985433   235789999999999999999998885543      345778888


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-----
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-----  188 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-----  188 (309)
                      +.. +|.+.|..  .+.++...++-++.||++||.||   |+.+|.||||||.|++++++..+||||||+++.-.     
T Consensus       139 mQS-DLHKIIVS--PQ~Ls~DHvKVFlYQILRGLKYL---HsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~  212 (449)
T KOG0664|consen  139 MQS-DLHKIIVS--PQALTPDHVKVFVYQILRGLKYL---HTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRL  212 (449)
T ss_pred             HHh-hhhheecc--CCCCCcchhhhhHHHHHhhhHHH---hhcchhhccCCCccEEeccCceEEecccccccccchhhhh
Confidence            866 99998877  78899899999999999999999   88899999999999999999999999999997543     


Q ss_pred             ---ccCCCCCCCCCCCC---CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHH--HHHh------------ccccccc
Q 021659          189 ---NYATMPHSSCPEDC---STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQW--IQES------------SISSSIH  248 (309)
Q Consensus       189 ---~~~~~~~~~~PE~~---~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~--~~~~------------~~~~~~~  248 (309)
                         ...-|-.|.+||..   +.++.+.||||.||++.|++-++..|.....+.+.  +...            -+..+.+
T Consensus       213 hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H  292 (449)
T KOG0664|consen  213 NMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNH  292 (449)
T ss_pred             hhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHH
Confidence               23456789999974   34588999999999999999999988654333322  1111            1111110


Q ss_pred             ----ccccCcCCCCC--C--HHHHHHHHHHHHHccCCCCCCCCChHHHHHHH
Q 021659          249 ----RMIDPDLGGSY--D--SKELKKLLAVARLCIKTKDKPTISIPQISRYL  292 (309)
Q Consensus       249 ----~~~~~~l~~~~--~--~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L  292 (309)
                          ....|.+..-+  +  .+.-..-+.+.+.++.+||+.|.+..+.+..+
T Consensus       293 ~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~  344 (449)
T KOG0664|consen  293 VLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR  344 (449)
T ss_pred             hhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence                11112211100  0  11223344566689999999999988877554

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.95  E-value=4.7e-28  Score=200.63  Aligned_cols=232  Identities=17%  Similarity=0.256  Sum_probs=171.6

Q ss_pred             cccccccCCCceEEEEEEc-CCcEEEEEEeccccccHHHHHHHHHHHccC-CCCCcceEee--eEeCCeeEEEEeeCCCC
Q 021659           42 FHRIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLEKDAFYREIQLLGRL-HHRHLLALQG--FSTGRKRLLVFDNIENG  117 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~~~~~~~ei~~l~~l-~h~niv~~~~--~~~~~~~~lv~e~~~~~  117 (309)
                      +.+.+|+|.||.+-++.++ ++..+++|-++......++|.+|.-.--.| .|.||+..|+  |.+.+..++++||++-|
T Consensus        28 I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP~g  107 (378)
T KOG1345|consen   28 INKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAPRG  107 (378)
T ss_pred             HHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCccc
Confidence            4478999999999999974 577889999987777788999998766666 4899999988  44445555899999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC--CCceeEeccccccccccc----C
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE--NFTAKLSDVGFFNSVRNY----A  191 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~--~~~~kl~dfg~~~~~~~~----~  191 (309)
                      +|..-+..   ..+.+..-.+++.|+++||.||   |+++++|||||.+||||-.  ..++|+||||.....+..    .
T Consensus       108 dL~snv~~---~GigE~~~K~v~~ql~SAi~fM---HsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~~  181 (378)
T KOG1345|consen  108 DLRSNVEA---AGIGEANTKKVFAQLLSAIEFM---HSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYLE  181 (378)
T ss_pred             hhhhhcCc---ccccHHHHHHHHHHHHHHHHHh---hccchhhcccccceEEEecCCccEEEeeecccccccCceehhhh
Confidence            99998875   5677888899999999999999   8999999999999999943  358999999998655433    3


Q ss_pred             CCCCCCCCCCCCC-------CCCCCcEeehhhHHHHHHhCCCCCCCC----ccHHHHHHHhcccccccccccCcCCCCCC
Q 021659          192 TMPHSSCPEDCST-------QDCSNIIFQLGVLILELVTGQSPEEGD----VDLIQWIQESSISSSIHRMIDPDLGGSYD  260 (309)
Q Consensus       192 ~~~~~~~PE~~~~-------~~~~~Dv~slG~~l~~l~tg~~p~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  260 (309)
                      ....|.+||....       ..+.+|+|.||++++.++||..||...    .....|.  .+.....+.  -|..-..++
T Consensus       182 ~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~--~w~~rk~~~--~P~~F~~fs  257 (378)
T KOG1345|consen  182 YVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWE--QWLKRKNPA--LPKKFNPFS  257 (378)
T ss_pred             hhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHH--HHhcccCcc--CchhhcccC
Confidence            3457788885321       268899999999999999999999743    2222222  232222221  122212233


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCCChHH
Q 021659          261 SKELKKLLAVARLCIKTKDKPTISIPQ  287 (309)
Q Consensus       261 ~~~~~~l~~l~~~cl~~dp~~Rps~~e  287 (309)
                      +    ..+++-.+-|.++|++|-.+.+
T Consensus       258 ~----~a~r~Fkk~lt~~~~drcki~~  280 (378)
T KOG1345|consen  258 E----KALRLFKKSLTPRFKDRCKIWT  280 (378)
T ss_pred             H----HHHHHHHHhcCCcccccchhHH
Confidence            3    2333334788899999844433

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.95  E-value=1.6e-27  Score=216.98  Aligned_cols=184  Identities=17%  Similarity=0.247  Sum_probs=157.5

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc----cHHHHHHHHHHHccCCCCCcceEee-eEeCCeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL----EKDAFYREIQLLGRLHHRHLLALQG-FSTGRKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~----~~~~~~~ei~~l~~l~h~niv~~~~-~~~~~~~~lv~e~~~~~  117 (309)
                      +-||-|+||.|.++.. +....||+|.+.+.+-    .....+.|-++|..-..+-||++|- |.++...|+||+|++||
T Consensus       635 k~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGG  714 (1034)
T KOG0608|consen  635 KTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGG  714 (1034)
T ss_pred             eeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCc
Confidence            3699999999999985 4467899999854321    2235678999999999999999987 55568999999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---------
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---------  188 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---------  188 (309)
                      ++-.++..  -+.|.+..+.+++.++..|+++.   |+-|+|||||||+|||||.+|.+||.|||++.-+.         
T Consensus       715 DmMSLLIr--mgIFeE~LARFYIAEltcAiesV---HkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq  789 (1034)
T KOG0608|consen  715 DMMSLLIR--MGIFEEDLARFYIAELTCAIESV---HKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQ  789 (1034)
T ss_pred             cHHHHHHH--hccCHHHHHHHHHHHHHHHHHHH---HhccceecccCccceEEccCCceeeeeccccccceecccccccc
Confidence            99998877  58899999999999999999999   89999999999999999999999999999985332         


Q ss_pred             ----------------------------------------ccCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHhCCC
Q 021659          189 ----------------------------------------NYATMPHSSCPEDC--STQDCSNIIFQLGVLILELVTGQS  226 (309)
Q Consensus       189 ----------------------------------------~~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~tg~~  226 (309)
                                                              .-.||+.|.|||..  .+++..+|-||.|++||||+.|+.
T Consensus       790 ~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~  869 (1034)
T KOG0608|consen  790 EGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQP  869 (1034)
T ss_pred             CCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCC
Confidence                                                    12588999999964  456788999999999999999999


Q ss_pred             CCCCCc
Q 021659          227 PEEGDV  232 (309)
Q Consensus       227 p~~~~~  232 (309)
                      ||..+.
T Consensus       870 pf~~~t  875 (1034)
T KOG0608|consen  870 PFLADT  875 (1034)
T ss_pred             CccCCC
Confidence            997654

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.95  E-value=8.4e-28  Score=214.46  Aligned_cols=186  Identities=22%  Similarity=0.233  Sum_probs=154.5

Q ss_pred             ccccCCCceEEEEEEc-CCcEEEEEEeccccccHHHHHHHHHHHccCC------CCCcceEee-eEeCCeeEEEEeeCCC
Q 021659           45 IVYTNSHGAAYKARFQ-DGEVALVKEIQALNLEKDAFYREIQLLGRLH------HRHLLALQG-FSTGRKRLLVFDNIEN  116 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~------h~niv~~~~-~~~~~~~~lv~e~~~~  116 (309)
                      -.|+|-|++|.+|... -|..||+|++.+.+.=.+.=..|+++|++|+      --|+++++- |...++.|+|+|-+..
T Consensus       439 ~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~Lsl  518 (752)
T KOG0670|consen  439 YTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPLSL  518 (752)
T ss_pred             ccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhhhc
Confidence            4899999999999964 3679999999766544444467999999995      246777776 6667899999998865


Q ss_pred             CCHHHhhcC-CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC-CceeEecccccccccccCCC-
Q 021659          117 GSLKEHLND-PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN-FTAKLSDVGFFNSVRNYATM-  193 (309)
Q Consensus       117 ~sL~~~i~~-~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~-~~~kl~dfg~~~~~~~~~~~-  193 (309)
                       +|.+.++. +.+..|....+..++.|+.-||..|   ...+|+|.||||+|||++.. ..+||||||.|...+...-| 
T Consensus       519 -NLRevLKKyG~nvGL~ikaVRsYaqQLflALklL---K~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneitP  594 (752)
T KOG0670|consen  519 -NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLL---KKCGVLHADIKPDNILVNESKNILKLCDFGSASFASENEITP  594 (752)
T ss_pred             -hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHH---HhcCeeecccCccceEeccCcceeeeccCccccccccccccH
Confidence             99999975 3357788899999999999999999   99999999999999999865 67899999999777655444 


Q ss_pred             ----CCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccH
Q 021659          194 ----PHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDL  234 (309)
Q Consensus       194 ----~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~  234 (309)
                          ..|.|||+..+  +.+.-|+||.||+||||.||+..|++.++-
T Consensus       595 YLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN  641 (752)
T KOG0670|consen  595 YLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNN  641 (752)
T ss_pred             HHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcH
Confidence                46889998655  478899999999999999999999876543

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.94  E-value=1e-27  Score=202.62  Aligned_cols=233  Identities=18%  Similarity=0.234  Sum_probs=174.4

Q ss_pred             cccCCCceEEEEEE-cCCcEEEEEEeccc---cccHHHHHHHHHHHccCCCCCcceEeeeEeC-------CeeEEEEeeC
Q 021659           46 VYTNSHGAAYKARF-QDGEVALVKEIQAL---NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-------RKRLLVFDNI  114 (309)
Q Consensus        46 lg~G~~~~v~~~~~-~~~~~va~K~~~~~---~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-------~~~~lv~e~~  114 (309)
                      ++.|.- .|-.+.. -.++.|++|+....   ....++..+|..++..++|+||++++.+++.       ...|+|||++
T Consensus        25 ~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m  103 (369)
T KOG0665|consen   25 IGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELM  103 (369)
T ss_pred             cCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhh
Confidence            455554 4444443 23677888877322   3334678899999999999999999998764       3468999999


Q ss_pred             CCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------
Q 021659          115 ENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------  188 (309)
Q Consensus       115 ~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------  188 (309)
                      +. +|.+.+.    -.++-.+...++.|++.|+.+|   |+.||+||||||+||++..++.+||.|||++....      
T Consensus       104 ~~-nl~~vi~----~elDH~tis~i~yq~~~~ik~l---hs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~mt  175 (369)
T KOG0665|consen  104 DA-NLCQVIL----MELDHETISYILYQMLCGIKHL---HSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMMT  175 (369)
T ss_pred             hh-HHHHHHH----HhcchHHHHHHHHHHHHHHHHH---HhcceeecccCcccceecchhheeeccchhhcccCcccccC
Confidence            77 9988875    3477788999999999999999   88999999999999999999999999999987443      


Q ss_pred             ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccccc------------------
Q 021659          189 NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIH------------------  248 (309)
Q Consensus       189 ~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~------------------  248 (309)
                      .+..+..|.|||...+  ..+.+||||+||++.||++|...|.+...+.+|-+.....+...                  
T Consensus       176 pyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~  255 (369)
T KOG0665|consen  176 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENR  255 (369)
T ss_pred             chhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcC
Confidence            4466678999997544  46779999999999999999999998888887755332222110                  


Q ss_pred             ---------ccc-cCcC----CCC-CCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          249 ---------RMI-DPDL----GGS-YDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       249 ---------~~~-~~~l----~~~-~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                               +.+ |...    ..+ .....+++   ++.+||..||++|.|++++|+
T Consensus       256 ~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ard---ll~~MLvi~pe~Risv~daL~  309 (369)
T KOG0665|consen  256 PQYQAISFSELFPDSLFPVVLEGSKLDCSLARD---LLSKMLVIDPEKRISVDDALR  309 (369)
T ss_pred             hHhhccchhhhCCcccccccccCCccchHHHHH---HHHHhhccChhhcccHHHHhc
Confidence                     000 0000    011 12233444   455999999999999999985

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=1.4e-26  Score=205.27  Aligned_cols=125  Identities=17%  Similarity=0.212  Sum_probs=109.5

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccCC-----C---CCcceEeeeEe-----CCeeEE
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRLH-----H---RHLLALQGFST-----GRKRLL  109 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~-----h---~niv~~~~~~~-----~~~~~l  109 (309)
                      ++||.|.|++||++.. ...+.||+|+.+....-.+....||++|++++     |   .+||++++++.     ..+.++
T Consensus        84 rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCM  163 (590)
T KOG1290|consen   84 RKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCM  163 (590)
T ss_pred             EeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEE
Confidence            6899999999999985 66899999999877777788899999999984     2   47899999653     257889


Q ss_pred             EEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeC
Q 021659          110 VFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLD  171 (309)
Q Consensus       110 v~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~  171 (309)
                      |+|++-. +|..+|.....+.++...+.+|+.|++.||.|||  .+.||||.||||.|||+-
T Consensus       164 VfEvLGd-nLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH--~ecgIIHTDlKPENvLl~  222 (590)
T KOG1290|consen  164 VFEVLGD-NLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLH--RECGIIHTDLKPENVLLC  222 (590)
T ss_pred             Eehhhhh-HHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHH--HhcCccccCCCcceeeee
Confidence            9999944 9999998877889999999999999999999998  678999999999999983

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.94  E-value=4.6e-26  Score=192.15  Aligned_cols=183  Identities=26%  Similarity=0.368  Sum_probs=157.4

Q ss_pred             ccccccCCCceEEEEEEcC-CcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCC
Q 021659           43 HRIVYTNSHGAAYKARFQD-GEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGS  118 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~-~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~s  118 (309)
                      .+.||+|+++.||++...+ ++.+++|.+.....  ..+.+.+|++.+++++|+|++++++++.. ...++++|++++++
T Consensus         4 ~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~   83 (225)
T smart00221        4 GKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGD   83 (225)
T ss_pred             eeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCC
Confidence            4679999999999999865 78999999865443  35678899999999999999999997765 67789999999999


Q ss_pred             HHHhhcCCCCCC-CCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc--------
Q 021659          119 LKEHLNDPLKTP-LDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN--------  189 (309)
Q Consensus       119 L~~~i~~~~~~~-l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~--------  189 (309)
                      |.+++...  .. +++..+..++.+++.++.+|   |+.+++|+|++|.|++++.++.++++|||.+.....        
T Consensus        84 L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~l---h~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~  158 (225)
T smart00221       84 LFDYLRKK--GGKLSEEEARFYLRQILEALEYL---HSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKT  158 (225)
T ss_pred             HHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccc
Confidence            99999762  33 88999999999999999999   777999999999999999999999999998865433        


Q ss_pred             cCCCCCCCCCCCC---CCCCCCCcEeehhhHHHHHHhCCCCCCC
Q 021659          190 YATMPHSSCPEDC---STQDCSNIIFQLGVLILELVTGQSPEEG  230 (309)
Q Consensus       190 ~~~~~~~~~PE~~---~~~~~~~Dv~slG~~l~~l~tg~~p~~~  230 (309)
                      ..++..|.+||..   ...+.++|+||||+++++|++|+.||..
T Consensus       159 ~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      159 VKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             eeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            3455678999975   3446789999999999999999999976

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.94  E-value=2.3e-27  Score=216.99  Aligned_cols=233  Identities=21%  Similarity=0.230  Sum_probs=184.1

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccccc-HHHHHHHHHHHccCCCCCcceEee-eEeCCeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLE-KDAFYREIQLLGRLHHRHLLALQG-FSTGRKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~-~~~~~~ei~~l~~l~h~niv~~~~-~~~~~~~~lv~e~~~~~sL~  120 (309)
                      ..+|.|++|.||+++. .+++..|+|+++....+ -.-+..|+-.++.-+||||+.++| |-.+...++.||||.+|+|.
T Consensus        21 qrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgggslQ  100 (829)
T KOG0576|consen   21 QRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQ  100 (829)
T ss_pred             eeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCccc
Confidence            4799999999999996 67899999999765433 345678898899999999999999 44567889999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc-------cccCCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-------RNYATM  193 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-------~~~~~~  193 (309)
                      +.-..  .+++++.+....+...++|+.||   |+.|-+|||||-.||++++.|.+|++|||.+...       ....||
T Consensus       101 diy~~--TgplselqiayvcRetl~gl~yl---hs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~KrksfiGt  175 (829)
T KOG0576|consen  101 DIYHV--TGPLSELQIAYVCRETLQGLKYL---HSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKSFIGT  175 (829)
T ss_pred             ceeee--cccchhHHHHHHHhhhhccchhh---hcCCcccccccccceeecccCceeecccCchhhhhhhhhhhhcccCC
Confidence            87665  68899999999999999999999   8899999999999999999999999999987533       356899


Q ss_pred             CCCCCCCC-----CCCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCC-CCCHHHHHHH
Q 021659          194 PHSSCPED-----CSTQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGG-SYDSKELKKL  267 (309)
Q Consensus       194 ~~~~~PE~-----~~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~l  267 (309)
                      +.|++||.     ..++...+|||++|+...|+.--++|.-.......... +...+    ...|.+.. ......+.++
T Consensus       176 pywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~L-mTkS~----~qpp~lkDk~kws~~fh~f  250 (829)
T KOG0576|consen  176 PYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFL-MTKSG----FQPPTLKDKTKWSEFFHNF  250 (829)
T ss_pred             ccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHH-hhccC----CCCCcccCCccchHHHHHH
Confidence            99999994     45668899999999999999988888543333322222 22111    11122222 2234444555


Q ss_pred             HHHHHHccCCCCCCCCChHHHH
Q 021659          268 LAVARLCIKTKDKPTISIPQIS  289 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~evl  289 (309)
                      ++   .|+-.+|+.||++..++
T Consensus       251 vK---~altknpKkRptaeklL  269 (829)
T KOG0576|consen  251 VK---GALTKNPKKRPTAEKLL  269 (829)
T ss_pred             HH---HHhcCCCccCCChhhhe
Confidence            45   99999999999998765

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.94  E-value=5.5e-27  Score=211.52  Aligned_cols=181  Identities=20%  Similarity=0.206  Sum_probs=154.7

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccccH---------HHHHHHHHHHccCC---CCCcceEeeeEeC-CeeEE
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLEK---------DAFYREIQLLGRLH---HRHLLALQGFSTG-RKRLL  109 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~~---------~~~~~ei~~l~~l~---h~niv~~~~~~~~-~~~~l  109 (309)
                      +.+|.|+||.|+.+.++ +...|++|.+.+...-.         ..+..||.+|..|+   |+||+++++|+.+ +..|+
T Consensus       567 q~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~yyl  646 (772)
T KOG1152|consen  567 QPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDYYYL  646 (772)
T ss_pred             eeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCCeeEE
Confidence            47999999999999974 46788999885432211         12467999999997   9999999999876 56678


Q ss_pred             EEeeC-CCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc
Q 021659          110 VFDNI-ENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR  188 (309)
Q Consensus       110 v~e~~-~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~  188 (309)
                      +||-. ++.+|.++|..  ...+++.++.-|++|++.|+++|   |+.||+|||||-.|+.++++|.+|++|||.+....
T Consensus       647 ~te~hg~gIDLFd~IE~--kp~m~E~eAk~IFkQV~agi~hl---h~~~ivhrdikdenvivd~~g~~klidfgsaa~~k  721 (772)
T KOG1152|consen  647 ETEVHGEGIDLFDFIEF--KPRMDEPEAKLIFKQVVAGIKHL---HDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTK  721 (772)
T ss_pred             EecCCCCCcchhhhhhc--cCccchHHHHHHHHHHHhccccc---cccCceecccccccEEEecCCeEEEeeccchhhhc
Confidence            89876 56699999987  68899999999999999999999   99999999999999999999999999999875443


Q ss_pred             -----ccCCCCCCCCCCCCCCC---CCCCcEeehhhHHHHHHhCCCCCC
Q 021659          189 -----NYATMPHSSCPEDCSTQ---DCSNIIFQLGVLILELVTGQSPEE  229 (309)
Q Consensus       189 -----~~~~~~~~~~PE~~~~~---~~~~Dv~slG~~l~~l~tg~~p~~  229 (309)
                           ...||..|+|||...+.   +..-|||+||++||.++...+||.
T Consensus       722 sgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  722 SGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             CCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence                 45899999999987664   556899999999999999999985

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=1.8e-26  Score=196.57  Aligned_cols=181  Identities=20%  Similarity=0.320  Sum_probs=153.7

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecc----ccccHHHHHHHHHHHccC-CCCCcceEeeeE-eCCeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQA----LNLEKDAFYREIQLLGRL-HHRHLLALQGFS-TGRKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~----~~~~~~~~~~ei~~l~~l-~h~niv~~~~~~-~~~~~~lv~e~~~~  116 (309)
                      +.||.|+|.+|..+++ +..++||+|++++    .+.+.+-...|--+..+- +||.++-+..++ ++...++|.||++|
T Consensus       256 ~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv~g  335 (593)
T KOG0695|consen  256 RVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVNG  335 (593)
T ss_pred             eeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEecC
Confidence            4799999999999996 4578999999853    233334455666666665 699999888855 45677899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccc-------cccc
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFN-------SVRN  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~-------~~~~  189 (309)
                      |+|-=.++.  ...++++.+..+...|+-||.||   |++||+.||||.+|++++..|.+|+.|+|.++       ..+.
T Consensus       336 gdlmfhmqr--qrklpeeharfys~ei~lal~fl---h~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd~tst  410 (593)
T KOG0695|consen  336 GDLMFHMQR--QRKLPEEHARFYSAEICLALNFL---HERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTTST  410 (593)
T ss_pred             cceeeehhh--hhcCcHHHhhhhhHHHHHHHHHH---hhcCeeeeeccccceEEccCCceeecccchhhcCCCCCccccc
Confidence            999766665  57799999999999999999999   88999999999999999999999999999986       3356


Q ss_pred             cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCC
Q 021659          190 YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEE  229 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~  229 (309)
                      ..||+.|.|||..++  ++++.|-|+||++++||+.|+.||.
T Consensus       411 fcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfd  452 (593)
T KOG0695|consen  411 FCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFD  452 (593)
T ss_pred             ccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcc
Confidence            789999999998766  4789999999999999999999995

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.93  E-value=2.2e-26  Score=199.34  Aligned_cols=236  Identities=20%  Similarity=0.262  Sum_probs=181.6

Q ss_pred             ccccCCCceEEEEEEc------CCcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC--CeeEEEEeeC
Q 021659           45 IVYTNSHGAAYKARFQ------DGEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG--RKRLLVFDNI  114 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~------~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~--~~~~lv~e~~  114 (309)
                      ++-+|.||.||+|.|.      +.+.|.+|.++....  ....+..|.-.+..+.|||+.++.+.+-.  ...++++.++
T Consensus       291 llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~~~  370 (563)
T KOG1024|consen  291 LLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYPAT  370 (563)
T ss_pred             hhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEecc
Confidence            6889999999999653      345566777744332  33567888889999999999999997643  6778889999


Q ss_pred             CCCCHHHhhc-----C-CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc
Q 021659          115 ENGSLKEHLN-----D-PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR  188 (309)
Q Consensus       115 ~~~sL~~~i~-----~-~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~  188 (309)
                      .-|+|..++.     + ...+.++--+...++.|++.|++||   |+.+++|.||..+|-+|++.-.+|++|=.+++...
T Consensus       371 ~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hl---h~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLF  447 (563)
T KOG1024|consen  371 GVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHL---HNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLF  447 (563)
T ss_pred             CcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHH---HhcCcccchhhhhcceehhheeEEeccchhccccC
Confidence            9999999886     2 2356788888899999999999999   88899999999999999999999999998876432


Q ss_pred             ---------ccCCCCCCCCCCC--CCCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCC
Q 021659          189 ---------NYATMPHSSCPED--CSTQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLG  256 (309)
Q Consensus       189 ---------~~~~~~~~~~PE~--~~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  256 (309)
                               +..+...|++||.  ...++.++||||||+++|||+| |+.|+..-+.. + +..+...+.       ++.
T Consensus       448 P~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPf-E-m~~ylkdGy-------Rla  518 (563)
T KOG1024|consen  448 PGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPF-E-MEHYLKDGY-------RLA  518 (563)
T ss_pred             cccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHH-H-HHHHHhccc-------eec
Confidence                     3355678999995  4446889999999999999998 99998643221 1 222222221       111


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhh
Q 021659          257 GSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQN  294 (309)
Q Consensus       257 ~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~  294 (309)
                      +  +.++.-+|..++.-||..+|++||+.+++..-|.+
T Consensus       519 Q--P~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLse  554 (563)
T KOG1024|consen  519 Q--PFNCPDELFTVMACCWALLPEERPSFSQLVICLSE  554 (563)
T ss_pred             C--CCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHH
Confidence            1  11234567778889999999999999999987764

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.92  E-value=1.2e-25  Score=223.17  Aligned_cols=185  Identities=15%  Similarity=0.239  Sum_probs=130.8

Q ss_pred             ccCCC-CCcceEeeeEe--------CCeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCe
Q 021659           88 GRLHH-RHLLALQGFST--------GRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPM  158 (309)
Q Consensus        88 ~~l~h-~niv~~~~~~~--------~~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i  158 (309)
                      +.++| +||.++++.+.        ....+.++|++. ++|.+++... ...+++.+++.++.||+.||.||   |+++|
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~l---H~~gI  101 (793)
T PLN00181         27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECED-VSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAA---HSQGI  101 (793)
T ss_pred             chhhHHHHHHHhhcccCCccccccccchhhhhhccCC-ccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHH---HhCCe
Confidence            45555 57777777541        123456778774 4999999753 45699999999999999999999   88899


Q ss_pred             eecccCCCceeeCC-------------------CCceeEeccccccccc-----------------------ccCCCCCC
Q 021659          159 YYVSISSSSIMLDE-------------------NFTAKLSDVGFFNSVR-----------------------NYATMPHS  196 (309)
Q Consensus       159 ~H~dl~p~nill~~-------------------~~~~kl~dfg~~~~~~-----------------------~~~~~~~~  196 (309)
                      +||||||+|||++.                   ++.+|++|||+++...                       ...+|+.|
T Consensus       102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y  181 (793)
T PLN00181        102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY  181 (793)
T ss_pred             eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence            99999999999954                   4456777777764311                       02356779


Q ss_pred             CCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHHc
Q 021659          197 SCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLC  274 (309)
Q Consensus       197 ~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~c  274 (309)
                      +|||...+  ++.++|||||||++|||++|..|+.............        ...+..     .........++.+|
T Consensus       182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~~--------~~~~~~-----~~~~~~~~~~~~~~  248 (793)
T PLN00181        182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHR--------VLPPQI-----LLNWPKEASFCLWL  248 (793)
T ss_pred             EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHHh--------hcChhh-----hhcCHHHHHHHHHh
Confidence            99997543  4789999999999999999988875432221111110        111111     11123345677799


Q ss_pred             cCCCCCCCCChHHHHH
Q 021659          275 IKTKDKPTISIPQISR  290 (309)
Q Consensus       275 l~~dp~~Rps~~evl~  290 (309)
                      |+++|..||++.|+++
T Consensus       249 L~~~P~~Rps~~eil~  264 (793)
T PLN00181        249 LHPEPSCRPSMSELLQ  264 (793)
T ss_pred             CCCChhhCcChHHHhh
Confidence            9999999999999975

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.92  E-value=1.6e-24  Score=189.40  Aligned_cols=177  Identities=20%  Similarity=0.230  Sum_probs=149.0

Q ss_pred             cccccCCCceEEEEEEc----CCcEEEEEEeccccccHHHHHHHHHHHccCC-CCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ----DGEVALVKEIQALNLEKDAFYREIQLLGRLH-HRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~----~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~-h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      .+||+|+|++||++...    ..+.||+|.+.... ...++.+|++.|..+. +.||+++.++... .+..+|+||++..
T Consensus        42 ~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H~  120 (418)
T KOG1167|consen   42 NKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEHD  120 (418)
T ss_pred             ccccccchhhhhhhhHhhhccccceEeeeeccccc-CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccCcc
Confidence            58999999999999852    46889999986443 3567999999999995 8999999997754 7888999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC-CceeEecccccccc---------
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN-FTAKLSDVGFFNSV---------  187 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~-~~~kl~dfg~~~~~---------  187 (309)
                      ...++...     ++...+..++..+++||.++   |.+||+||||||+|++.+.. +.-.|+|||++...         
T Consensus       121 ~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~---h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s  192 (418)
T KOG1167|consen  121 RFRDLYRS-----LSLAEIRWYLRNLLKALAHL---HKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHS  192 (418)
T ss_pred             CHHHHHhc-----CCHHHHHHHHHHHHHHhhhh---hccCccccCCCccccccccccCCceEEechhHHHHHhhhhhhhh
Confidence            99998765     67888999999999999999   99999999999999999754 66789999997410         


Q ss_pred             --------c----------------------------------ccCCCCCCCCCCCC---CCCCCCCcEeehhhHHHHHH
Q 021659          188 --------R----------------------------------NYATMPHSSCPEDC---STQDCSNIIFQLGVLILELV  222 (309)
Q Consensus       188 --------~----------------------------------~~~~~~~~~~PE~~---~~~~~~~Dv~slG~~l~~l~  222 (309)
                              .                                  +..||++|.|||..   ...+++.||||.|+++..++
T Consensus       193 ~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lsll  272 (418)
T KOG1167|consen  193 RSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLL  272 (418)
T ss_pred             hhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhh
Confidence                    0                                  12578889999953   33478899999999999999


Q ss_pred             hCCCCCC
Q 021659          223 TGQSPEE  229 (309)
Q Consensus       223 tg~~p~~  229 (309)
                      ++..||-
T Consensus       273 s~~~PFf  279 (418)
T KOG1167|consen  273 SRRYPFF  279 (418)
T ss_pred             ccccccc
Confidence            9999973

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.91  E-value=3e-24  Score=175.10  Aligned_cols=162  Identities=17%  Similarity=0.126  Sum_probs=118.9

Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc--ccCCCC
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR--NYATMP  194 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~--~~~~~~  194 (309)
                      |||.+++... +..+++..++.++.|++.||.|||   +.+      ||+||+++.++.+++  ||++....  ...+++
T Consensus         1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH---~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~~~g~~   68 (176)
T smart00750        1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELH---RQA------KSGNILLTWDGLLKL--DGSVAFKTPEQSRVDP   68 (176)
T ss_pred             CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHH---hcC------CcccEeEcCccceee--ccceEeeccccCCCcc
Confidence            6899998752 356999999999999999999995   444      999999999999999  99886543  236789


Q ss_pred             CCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHH-H--HHHHH
Q 021659          195 HSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKE-L--KKLLA  269 (309)
Q Consensus       195 ~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~--~~l~~  269 (309)
                      .|+|||...+  .++++|||||||++|||++|+.||..................  .. .+  ........ .  ..+.+
T Consensus        69 ~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~--~~-~~--~~~~~~~~~~~~~~~~~  143 (176)
T smart00750       69 YFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMP--AD-DP--RDRSNLESVSAARSFAD  143 (176)
T ss_pred             cccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhc--cC-Cc--cccccHHHHHhhhhHHH
Confidence            9999997543  478999999999999999999999755433222221111000  00 00  00011111 1  25788


Q ss_pred             HHHHccCCCCCCCCChHHHHHHHhhh
Q 021659          270 VARLCIKTKDKPTISIPQISRYLQNE  295 (309)
Q Consensus       270 l~~~cl~~dp~~Rps~~evl~~L~~~  295 (309)
                      ++.+||..+|++||++.++++.+...
T Consensus       144 ~i~~cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      144 FMRVCASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             HHHHHHhcccccccCHHHHHHHHHHH
Confidence            88899999999999999999988654

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.90  E-value=2.5e-22  Score=179.44  Aligned_cols=254  Identities=18%  Similarity=0.127  Sum_probs=182.1

Q ss_pred             cccccccCCCceEEEEEEcCC--cEEEEEEecccccc-HHHHHHHHHHHccCC----CCCcceEeeeEe--CCeeEEEEe
Q 021659           42 FHRIVYTNSHGAAYKARFQDG--EVALVKEIQALNLE-KDAFYREIQLLGRLH----HRHLLALQGFST--GRKRLLVFD  112 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~~--~~va~K~~~~~~~~-~~~~~~ei~~l~~l~----h~niv~~~~~~~--~~~~~lv~e  112 (309)
                      ..+.||+|+||.||.+.....  ..+|+|........ ...+..|+.++..+.    .+++..+++...  +...++||+
T Consensus        22 i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~  101 (322)
T KOG1164|consen   22 LGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMS  101 (322)
T ss_pred             EeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEe
Confidence            347899999999999996543  47888876543222 226888999998886    268888888773  356788888


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC-----CceeEecccccc--
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN-----FTAKLSDVGFFN--  185 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~-----~~~kl~dfg~~~--  185 (309)
                      .+ |.+|.++........++..+++.++.|++.+|.++   |+.|++||||||+|+++...     ..+.+.|||+++  
T Consensus       102 l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~l---H~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~  177 (322)
T KOG1164|consen  102 LL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDL---HSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRF  177 (322)
T ss_pred             cc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHH---HhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccc
Confidence            77 66999988654468899999999999999999999   89999999999999999865     358999999997  


Q ss_pred             ccc---------------ccCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHH--HHHHHhccccc
Q 021659          186 SVR---------------NYATMPHSSCPEDC--STQDCSNIIFQLGVLILELVTGQSPEEGDVDLI--QWIQESSISSS  246 (309)
Q Consensus       186 ~~~---------------~~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~--~~~~~~~~~~~  246 (309)
                      ...               ...||..|+++...  ...+++.|+||++.++.++..|..||.......  ..+........
T Consensus       178 ~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~  257 (322)
T KOG1164|consen  178 KYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLL  257 (322)
T ss_pred             cccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhc
Confidence            210               11267788887754  334789999999999999999999997654321  11111111111


Q ss_pred             ccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcccccc-cccccc
Q 021659          247 IHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCYK-YSRVSF  308 (309)
Q Consensus       247 ~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~~~-~~~~~~  308 (309)
                      ...      .....+.+...+..   .+-..+...+|....+...|+........+ ..+.||
T Consensus       258 ~~~------~~~~~~~~~~~~~~---~~~~~~~~~~Pdy~~~~~~l~~~~~~~~~~~~~~~dw  311 (322)
T KOG1164|consen  258 TDR------FGDLKPEEFAKILE---YIDSLDYEDKPDYEKLAELLKDVFDSEGSKEDSPFDW  311 (322)
T ss_pred             ccc------ccCCChHHHHHHHH---HhhccCCcCCCCHHHHHHHHHHHHHhcCCCCCCCCcc
Confidence            110      11223344444444   555588899999999999987776655322 344444

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.90  E-value=6.1e-24  Score=176.54  Aligned_cols=261  Identities=16%  Similarity=0.258  Sum_probs=189.5

Q ss_pred             cCCCCcccccccCHHHHHHhhcccccccccCCCceEEEEEEcCCcEEEEEEecc---ccccHHHHHHHHHHHccCCCCCc
Q 021659           19 SRSGPKCFIRRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQDGEVALVKEIQA---LNLEKDAFYREIQLLGRLHHRHL   95 (309)
Q Consensus        19 ~~~~~~~~~~~~~~~~i~~~~~~~~~~lg~G~~~~v~~~~~~~~~~va~K~~~~---~~~~~~~~~~ei~~l~~l~h~ni   95 (309)
                      .+++..+..++++.+++-..|     +|.+...|..|+|+|+.+.+| .|++..   .....+.|..|.-.|+-+.||||
T Consensus       176 ~rdatlsr~~gid~~~lnl~t-----kl~e~hsgelwrgrwqgndiv-akil~vr~~t~risrdfneefp~lrifshpni  249 (448)
T KOG0195|consen  176 TRDATLSRYTGIDVSSLNLIT-----KLAESHSGELWRGRWQGNDIV-AKILNVREVTARISRDFNEEFPALRIFSHPNI  249 (448)
T ss_pred             ccccccccccCcchhhhhhhh-----hhccCCCcccccccccCcchh-hhhhhhhhcchhhcchhhhhCcceeeecCCch
Confidence            344445555555555554433     588889999999999877665 455533   33334678999999999999999


Q ss_pred             ceEeeeEeC-CeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCC
Q 021659           96 LALQGFSTG-RKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENF  174 (309)
Q Consensus        96 v~~~~~~~~-~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~  174 (309)
                      +.++|.|.. .+..++..|++-|||...+....+..++..++.+++.+++.|++|||+.. .-+----|+...+++|++-
T Consensus       250 lpvlgacnsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedl  328 (448)
T KOG0195|consen  250 LPVLGACNSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDL  328 (448)
T ss_pred             hhhhhhccCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchh
Confidence            999999876 67779999999999999998866777888999999999999999997542 1122334778899999987


Q ss_pred             ceeEe--cccccccccccCCCCCCCCCCCCCCC-----CCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccc
Q 021659          175 TAKLS--DVGFFNSVRNYATMPHSSCPEDCSTQ-----DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSI  247 (309)
Q Consensus       175 ~~kl~--dfg~~~~~~~~~~~~~~~~PE~~~~~-----~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~  247 (309)
                      +.+|.  |--++-.-......+.|++||.....     .+++|+|||.++++|+.|+..||.......--.+..  -+.+
T Consensus       329 tarismad~kfsfqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkia--legl  406 (448)
T KOG0195|consen  329 TARISMADTKFSFQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIA--LEGL  406 (448)
T ss_pred             hhheecccceeeeeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhh--hccc
Confidence            66654  43333222334567899999964332     478999999999999999999998654432222211  1111


Q ss_pred             cccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhh
Q 021659          248 HRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEV  296 (309)
Q Consensus       248 ~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~  296 (309)
                      .-.+.|-+        ...+.+++.-|...||..||....++..|+++.
T Consensus       407 rv~ippgi--------s~hm~klm~icmnedpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  407 RVHIPPGI--------SRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             cccCCCCc--------cHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence            12222222        456677777999999999999999999999764

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.88  E-value=5.5e-22  Score=177.87  Aligned_cols=155  Identities=15%  Similarity=0.112  Sum_probs=118.0

Q ss_pred             HHHHHhhcccc--cccccCCCceEEEEEEc--CCcEEEEEEeccc------cccHHHHHHHHHHHccCCCCCcce-Eeee
Q 021659           33 KDIKMATDGFH--RIVYTNSHGAAYKARFQ--DGEVALVKEIQAL------NLEKDAFYREIQLLGRLHHRHLLA-LQGF  101 (309)
Q Consensus        33 ~~i~~~~~~~~--~~lg~G~~~~v~~~~~~--~~~~va~K~~~~~------~~~~~~~~~ei~~l~~l~h~niv~-~~~~  101 (309)
                      +++.....+|.  +.||+|+||+||+|...  +++.+|+|++...      ....+.+.+|+++|++++|+|++. ++++
T Consensus        11 ~~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~   90 (365)
T PRK09188         11 DQIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT   90 (365)
T ss_pred             cccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc
Confidence            34444455564  58999999999999864  5777899986422      112456899999999999999985 4432


Q ss_pred             EeCCeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeeccc-CCCceeeCCCCceeEec
Q 021659          102 STGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSI-SSSSIMLDENFTAKLSD  180 (309)
Q Consensus       102 ~~~~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl-~p~nill~~~~~~kl~d  180 (309)
                         ...|+||||+++++|... ..     ..   ...++.++++||.+|   |+.|++|||| ||+||+++.++.++|+|
T Consensus        91 ---~~~~LVmE~~~G~~L~~~-~~-----~~---~~~~~~~i~~aL~~l---H~~gIiHrDL~KP~NILv~~~~~ikLiD  155 (365)
T PRK09188         91 ---GKDGLVRGWTEGVPLHLA-RP-----HG---DPAWFRSAHRALRDL---HRAGITHNDLAKPQNWLMGPDGEAAVID  155 (365)
T ss_pred             ---CCcEEEEEccCCCCHHHh-Cc-----cc---hHHHHHHHHHHHHHH---HHCCCeeCCCCCcceEEEcCCCCEEEEE
Confidence               457899999999999732 21     11   145788999999999   7889999999 99999999999999999


Q ss_pred             ccccccccc---------------cCCCCCCCCCCCC
Q 021659          181 VGFFNSVRN---------------YATMPHSSCPEDC  202 (309)
Q Consensus       181 fg~~~~~~~---------------~~~~~~~~~PE~~  202 (309)
                      ||++.....               ..++..|.+||..
T Consensus       156 FGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~  192 (365)
T PRK09188        156 FQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDAL  192 (365)
T ss_pred             CccceecccCcchhhhhhhhhhhhhhccCccCCcccC
Confidence            999874432               2355668888853

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.88  E-value=3e-22  Score=165.23  Aligned_cols=138  Identities=15%  Similarity=0.139  Sum_probs=108.0

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEecccccc----------HH-----------------HHHHHHHHHccCCCCCcc
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLE----------KD-----------------AFYREIQLLGRLHHRHLL   96 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~----------~~-----------------~~~~ei~~l~~l~h~niv   96 (309)
                      ..||+|++|.||+|...+|+.||+|++......          ..                 ....|++.++++.++++.
T Consensus         3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~   82 (190)
T cd05147           3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP   82 (190)
T ss_pred             CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence            579999999999999878999999998543211          01                 123499999999877764


Q ss_pred             eEeeeEeCCeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCce
Q 021659           97 ALQGFSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTA  176 (309)
Q Consensus        97 ~~~~~~~~~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~  176 (309)
                      ....+.. ...++||||++++++......  ...++...+..++.|++.+|.++|  |..|++||||||+||+++ ++.+
T Consensus        83 ~p~~~~~-~~~~iVmE~i~g~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~l~--H~~giiHrDlkP~NIli~-~~~v  156 (190)
T cd05147          83 CPEPILL-KSHVLVMEFIGDDGWAAPRLK--DAPLSESKARELYLQVIQIMRILY--QDCRLVHADLSEYNLLYH-DGKL  156 (190)
T ss_pred             CCcEEEe-cCCEEEEEEeCCCCCcchhhh--cCCCCHHHHHHHHHHHHHHHHHHH--HhCCcccCCCCHHHEEEE-CCcE
Confidence            4333322 234899999998777655333  357889999999999999999996  678999999999999998 5789


Q ss_pred             eEecccccccc
Q 021659          177 KLSDVGFFNSV  187 (309)
Q Consensus       177 kl~dfg~~~~~  187 (309)
                      +|+|||++...
T Consensus       157 ~LiDFG~a~~~  167 (190)
T cd05147         157 YIIDVSQSVEH  167 (190)
T ss_pred             EEEEccccccC
Confidence            99999998643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.87  E-value=1.5e-23  Score=201.38  Aligned_cols=232  Identities=16%  Similarity=0.161  Sum_probs=167.1

Q ss_pred             cccccccCCCceEEEEEEcCCcEEEEEEec--cccccHHHHHHHHHH--HccCCCCCcceEeeeE-eCCeeEEEEeeCCC
Q 021659           42 FHRIVYTNSHGAAYKARFQDGEVALVKEIQ--ALNLEKDAFYREIQL--LGRLHHRHLLALQGFS-TGRKRLLVFDNIEN  116 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~~~~va~K~~~--~~~~~~~~~~~ei~~--l~~l~h~niv~~~~~~-~~~~~~lv~e~~~~  116 (309)
                      +.+.||.+.|=+|.+++.+.|. |++|++-  .....-+.|.++++-  ...+++||.+++.-+. .+...|+|=+|..+
T Consensus        27 ~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqyvkh  105 (1431)
T KOG1240|consen   27 YVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQYVKH  105 (1431)
T ss_pred             eecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHHHhh
Confidence            4468999999999999987775 7899983  333444555544433  3344899999887643 34556777788877


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc---------
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV---------  187 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~---------  187 (309)
                       +|.|++..  ..-+...+..-|+.|++.||..+   |..||+|||||.+|||+++-+.+.|+||...+..         
T Consensus       106 -nLyDRlST--RPFL~~iEKkWiaFQLL~al~qc---H~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPad  179 (1431)
T KOG1240|consen  106 -NLYDRLST--RPFLVLIEKKWIAFQLLKALSQC---HKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPAD  179 (1431)
T ss_pred             -hhhhhhcc--chHHHHHHHHHHHHHHHHHHHHH---HHcCccccccccceEEEeeechhhhhcccccCCccCCCCCccc
Confidence             99999987  45566777888999999999999   8999999999999999999999999999876421         


Q ss_pred             -----cccCCCCCCCCCCCCCC-------------CCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHH--hccccc
Q 021659          188 -----RNYATMPHSSCPEDCST-------------QDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQE--SSISSS  246 (309)
Q Consensus       188 -----~~~~~~~~~~~PE~~~~-------------~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~--~~~~~~  246 (309)
                           .+......|.|||.+..             -+++.||||+||++.|+++ |++||.-. ++..+-..  ......
T Consensus       180 f~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS-QL~aYr~~~~~~~e~~  258 (1431)
T KOG1240|consen  180 FTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS-QLLAYRSGNADDPEQL  258 (1431)
T ss_pred             ceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH-HHHhHhccCccCHHHH
Confidence                 11233457899996433             1578999999999999987 67777521 11111100  000001


Q ss_pred             ccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHh
Q 021659          247 IHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQ  293 (309)
Q Consensus       247 ~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~  293 (309)
                      +..+-|            ..+.++++.|++.||..|.++++.|+.-.
T Consensus       259 Le~Ied------------~~~Rnlil~Mi~rdPs~RlSAedyL~~yr  293 (1431)
T KOG1240|consen  259 LEKIED------------VSLRNLILSMIQRDPSKRLSAEDYLQKYR  293 (1431)
T ss_pred             HHhCcC------------ccHHHHHHHHHccCchhccCHHHHHHhhh
Confidence            111112            24557888999999999999999987754

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.86  E-value=6.6e-21  Score=162.48  Aligned_cols=245  Identities=15%  Similarity=0.144  Sum_probs=174.9

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccCC-CCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRLH-HRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~-h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      .++||+|+||.++.|+. -+++.||+| ++....+...+..|....+.|. .++|...+-|... .+..+|+|.+ |.||
T Consensus        33 GkKIGeGsFG~lf~G~Nl~nne~VAIK-fEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-GPSL  110 (449)
T KOG1165|consen   33 GKKIGEGSFGVLFLGKNLYNNEPVAIK-FEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-GPSL  110 (449)
T ss_pred             ccccccCcceeeecccccccCceEEEE-eccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-CcCH
Confidence            47999999999999993 578999999 4545555667889999999885 6899888877655 4567899988 6699


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC-----CceeEecccccccccc-----
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN-----FTAKLSDVGFFNSVRN-----  189 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~-----~~~kl~dfg~~~~~~~-----  189 (309)
                      +|+.. ..+..|+..+++.++.|++.-++++   |++.+|.|||||+|+||...     ..+.++|||+++...+     
T Consensus       111 EDLFD-~CgR~FSvKTV~miA~Qmi~rie~v---H~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~Tkq  186 (449)
T KOG1165|consen  111 EDLFD-LCGRRFSVKTVAMIAKQMITRIEYV---HEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQ  186 (449)
T ss_pred             HHHHH-HhcCcccHHhHHHHHHHHHHHHHHH---HhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccc
Confidence            98764 3368899999999999999999999   78889999999999999754     4589999999976543     


Q ss_pred             ---------cCCCCCCCCCC--CCCCCCCCCcEeehhhHHHHHHhCCCCCCCCcc--HHHHHHHhcccccccccccCcCC
Q 021659          190 ---------YATMPHSSCPE--DCSTQDCSNIIFQLGVLILELVTGQSPEEGDVD--LIQWIQESSISSSIHRMIDPDLG  256 (309)
Q Consensus       190 ---------~~~~~~~~~PE--~~~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~  256 (309)
                               -.||..|++--  ..+..++..|+-|||.++++++-|..||.+...  ..+..+..-.......+  ..+.
T Consensus       187 HIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i--~~Lc  264 (449)
T KOG1165|consen  187 HIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPI--EVLC  264 (449)
T ss_pred             cCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCH--HHHH
Confidence                     25777787643  445557889999999999999999999987532  22222211111100000  0011


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccc
Q 021659          257 GSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQ  299 (309)
Q Consensus       257 ~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~  299 (309)
                      . -.+.++...++.+.+   .+-.+-|..+-+...+..+++-.
T Consensus       265 ~-g~P~efa~Yl~yvR~---L~F~E~PDYdylr~Lf~dvldr~  303 (449)
T KOG1165|consen  265 E-GFPEEFATYLRYVRR---LDFFETPDYDYLRKLFDDVLDRL  303 (449)
T ss_pred             h-cCHHHHHHHHHHHHh---cCcccCCCHHHHHHHHHHHHHhc
Confidence            1 134455555554433   45556677776666555555433

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.85  E-value=6.4e-21  Score=156.01  Aligned_cols=185  Identities=17%  Similarity=0.184  Sum_probs=148.2

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccCCC-CCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRLHH-RHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h-~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      .++||.|+||.+|.|.. .+|..||+|+- ........+..|..+...|++ ..|..+..|..+ ....+||+.+ |.||
T Consensus        20 vrkiGsGSFGdIy~~~~i~~ge~VAiK~E-s~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL-GPsL   97 (341)
T KOG1163|consen   20 VRKIGSGSFGDIYLGISITSGEEVAIKLE-SSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL-GPSL   97 (341)
T ss_pred             EEeecCCchhheeeeeeccCCceEEEEee-cccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc-CccH
Confidence            37899999999999994 78999999964 344445568889999999975 566667666654 4566999987 6799


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC---CceeEecccccccccc-------
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN---FTAKLSDVGFFNSVRN-------  189 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~---~~~kl~dfg~~~~~~~-------  189 (309)
                      +++.+-- ...++..+++-++-|++.-++|+   |.++++||||||+|+++.-+   ..+.++|||+++...+       
T Consensus        98 EdLfnfC-~R~ftmkTvLMLaDQml~RiEyv---H~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HI  173 (341)
T KOG1163|consen   98 EDLFNFC-SRRFTMKTVLMLADQMLSRIEYV---HLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHI  173 (341)
T ss_pred             HHHHHHH-hhhhhHHhHHHHHHHHHHHHHHH---HhhccccccCCccceeeccccccceEEEEeccchhhhccccccccC
Confidence            9987632 56799999999999999999999   78899999999999999643   5689999999975532       


Q ss_pred             -------cCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHhCCCCCCCCcc
Q 021659          190 -------YATMPHSSCPEDC--STQDCSNIIFQLGVLILELVTGQSPEEGDVD  233 (309)
Q Consensus       190 -------~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~  233 (309)
                             -.||..|++--..  ...++..|+-|+|.++.++--|..||.+...
T Consensus       174 pyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka  226 (341)
T KOG1163|consen  174 PYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKA  226 (341)
T ss_pred             ccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccch
Confidence                   2566667664432  3346789999999999999999999987643

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.85  E-value=1.6e-20  Score=155.23  Aligned_cols=138  Identities=19%  Similarity=0.145  Sum_probs=108.2

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEecccccc---------------------------HHHHHHHHHHHccCCCCCcc
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLE---------------------------KDAFYREIQLLGRLHHRHLL   96 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~---------------------------~~~~~~ei~~l~~l~h~niv   96 (309)
                      ..||+|++|.||+|...+|+.||+|+.......                           ...+..|.+.+.++.++++.
T Consensus         3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~   82 (190)
T cd05145           3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVP   82 (190)
T ss_pred             ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            579999999999999878999999998543211                           11235788999999988875


Q ss_pred             eEeeeEeCCeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCC-CCeeecccCCCceeeCCCCc
Q 021659           97 ALQGFSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSN-LPMYYVSISSSSIMLDENFT  175 (309)
Q Consensus        97 ~~~~~~~~~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~-~~i~H~dl~p~nill~~~~~  175 (309)
                      ....+... ..++||||++++++......  ...++...+..++.+++.++.++   |. .|++|+||||.||+++ ++.
T Consensus        83 ~p~~~~~~-~~~lVmE~~~g~~~~~~~l~--~~~~~~~~~~~i~~~l~~~l~~l---H~~~givHrDlkP~NIll~-~~~  155 (190)
T cd05145          83 VPEPILLK-KNVLVMEFIGDDGSPAPRLK--DVPLEEEEAEELYEQVVEQMRRL---YQEAGLVHGDLSEYNILYH-DGK  155 (190)
T ss_pred             CceEEEec-CCEEEEEEecCCCchhhhhh--hccCCHHHHHHHHHHHHHHHHHH---HHhCCEecCCCChhhEEEE-CCC
Confidence            44443332 34899999998765443222  35677889999999999999999   55 8999999999999998 889


Q ss_pred             eeEeccccccccc
Q 021659          176 AKLSDVGFFNSVR  188 (309)
Q Consensus       176 ~kl~dfg~~~~~~  188 (309)
                      ++++|||++....
T Consensus       156 ~~liDFG~a~~~~  168 (190)
T cd05145         156 PYIIDVSQAVELD  168 (190)
T ss_pred             EEEEEcccceecC
Confidence            9999999987544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.84  E-value=1.4e-21  Score=186.00  Aligned_cols=240  Identities=13%  Similarity=0.085  Sum_probs=168.0

Q ss_pred             cccccccCCCceEEEEEE-cCCcEEEEEEec----cccccH---HHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEe
Q 021659           42 FHRIVYTNSHGAAYKARF-QDGEVALVKEIQ----ALNLEK---DAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFD  112 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~-~~~~~va~K~~~----~~~~~~---~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e  112 (309)
                      ....+|.|.+|.++.... ......+.|.+.    ......   ..+..|..+-..|.|+|++.....+.+ ...+-.||
T Consensus       322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE  401 (601)
T KOG0590|consen  322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME  401 (601)
T ss_pred             ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence            346899999997777763 233333334332    122111   125667777788899999887774433 22233499


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc----
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----  188 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----  188 (309)
                      ||+. +|...+..  ...++..++-.+++|++.|+.|+   |..|+.|||+||+|++++.+|.+|++|||.+..+.    
T Consensus       402 ~~~~-Dlf~~~~~--~~~~~~~e~~c~fKqL~~Gv~y~---h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e  475 (601)
T KOG0590|consen  402 YCPY-DLFSLVMS--NGKLTPLEADCFFKQLLRGVKYL---HSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE  475 (601)
T ss_pred             cccH-HHHHHHhc--ccccchhhhhHHHHHHHHHHHHH---HhcCceeccCccccEEEecCCceEEeecCcceeeccCcc
Confidence            9999 99999986  45788889999999999999999   88999999999999999999999999999875332    


Q ss_pred             -------ccCCCCCCCCCCCCCCC---CCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCC
Q 021659          189 -------NYATMPHSSCPEDCSTQ---DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGS  258 (309)
Q Consensus       189 -------~~~~~~~~~~PE~~~~~---~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  258 (309)
                             ...|+..|.|||.....   .+..||||.|+++..|.+|+.||........................   ...
T Consensus       476 ~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~---~~~  552 (601)
T KOG0590|consen  476 KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEG---PNR  552 (601)
T ss_pred             hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccC---hHH
Confidence                   34688899999976553   46799999999999999999999743221111101110000000000   011


Q ss_pred             CCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          259 YDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       259 ~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ...........++.++|+.||..|.|+.+|++
T Consensus       553 ~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  553 LLSLLPRETRIIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             HHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence            11223455566777999999999999999985

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.83  E-value=3.5e-19  Score=157.23  Aligned_cols=242  Identities=25%  Similarity=0.289  Sum_probs=179.6

Q ss_pred             ccccccCCCceEEEEEEcCCcEEEEEEeccccc----cHHHHHHHHHHHccCCCC-CcceEeeeEeC-CeeEEEEeeCCC
Q 021659           43 HRIVYTNSHGAAYKARFQDGEVALVKEIQALNL----EKDAFYREIQLLGRLHHR-HLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~----~~~~~~~ei~~l~~l~h~-niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      .+.||.|+|+.||.+...  ..+++|.+.....    ....+.+|+.++..+.|+ +++.+.+++.. ...+++++++.+
T Consensus         5 ~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~   82 (384)
T COG0515           5 LRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDG   82 (384)
T ss_pred             EEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCC
Confidence            357899999999999976  6788888854332    256789999999999987 79999997754 446899999999


Q ss_pred             CCHHHhhcCCCC-CCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCC-ceeEecccccccc-------
Q 021659          117 GSLKEHLNDPLK-TPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENF-TAKLSDVGFFNSV-------  187 (309)
Q Consensus       117 ~sL~~~i~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~-~~kl~dfg~~~~~-------  187 (309)
                      +++.+.+..... ..++......++.+++.++.++   |..+++|||+||.|++++..+ .++++|||.+...       
T Consensus        83 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~  159 (384)
T COG0515          83 GSLEDLLKKIGRKGPLSESEALFILAQILSALEYL---HSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTS  159 (384)
T ss_pred             CcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccc
Confidence            999977765211 2788999999999999999999   888899999999999999988 7999999987522       


Q ss_pred             ------cccCCCCCCCCCCCCC-----CCCCCCcEeehhhHHHHHHhCCCCCCCCcc---HHHHHHHhcccccccccccC
Q 021659          188 ------RNYATMPHSSCPEDCS-----TQDCSNIIFQLGVLILELVTGQSPEEGDVD---LIQWIQESSISSSIHRMIDP  253 (309)
Q Consensus       188 ------~~~~~~~~~~~PE~~~-----~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~  253 (309)
                            ....++..|.+||...     ......|+||+|++++++++|..||.....   ............ .. ....
T Consensus       160 ~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~-~~~~  237 (384)
T COG0515         160 SIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELP-TP-SLAS  237 (384)
T ss_pred             cccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcC-Cc-cccc
Confidence                  3446778899999643     457889999999999999999999876543   222221111111 00 0001


Q ss_pred             cCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          254 DLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       254 ~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      .............+.+++..|+..+|..|.+..+....
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         238 PLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             ccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence            11111011223456677779999999999998876653

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.83  E-value=1.5e-20  Score=157.51  Aligned_cols=160  Identities=13%  Similarity=0.103  Sum_probs=119.1

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccccHHH----------HHHHHHHHccCCCCCcceEeeeEe-C--------
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDA----------FYREIQLLGRLHHRHLLALQGFST-G--------  104 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~----------~~~ei~~l~~l~h~niv~~~~~~~-~--------  104 (309)
                      +.+|.|+||.||.... +++.+|+|.+.......+.          +.+|+..+.+++|++|..+.++.. .        
T Consensus        37 ~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~  115 (232)
T PRK10359         37 KVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLRYA  115 (232)
T ss_pred             EEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeeccccccccc
Confidence            6899999999999766 5668999999543333322          578999999999999999988633 1        


Q ss_pred             CeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccc
Q 021659          105 RKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFF  184 (309)
Q Consensus       105 ~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~  184 (309)
                      ...+++|||++|.+|.+...      ++.    ....+++.++..+   |..|++|||++|+|++++.++ ++++|||..
T Consensus       116 ~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~l---H~~gi~H~Dikp~Nili~~~g-i~liDfg~~  181 (232)
T PRK10359        116 HTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESL---HQHGMVSGDPHKGNFIVSKNG-LRIIDLSGK  181 (232)
T ss_pred             CCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHH---HHcCCccCCCChHHEEEeCCC-EEEEECCCc
Confidence            34789999999999988732      222    2456899999999   888999999999999999888 999999976


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCcEeehhhHHHHH
Q 021659          185 NSVRNYATMPHSSCPEDCSTQDCSNIIFQLGVLILEL  221 (309)
Q Consensus       185 ~~~~~~~~~~~~~~PE~~~~~~~~~Dv~slG~~l~~l  221 (309)
                      ...........+.   ..+....++|+||||+++..+
T Consensus       182 ~~~~e~~a~d~~v---ler~y~~~~di~~lg~~~~~~  215 (232)
T PRK10359        182 RCTAQRKAKDRID---LERHYGIKNEIKDLGYYLLIY  215 (232)
T ss_pred             ccccchhhHHHHH---HHhHhcccccccceeEeehHH
Confidence            5332111100000   012234689999999988755

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.80  E-value=3.6e-19  Score=146.30  Aligned_cols=172  Identities=13%  Similarity=0.066  Sum_probs=129.5

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccccHH-----HHHHHHHHHccCC-CCCcceEeeeEeCCeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKD-----AFYREIQLLGRLH-HRHLLALQGFSTGRKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~-----~~~~ei~~l~~l~-h~niv~~~~~~~~~~~~lv~e~~~~~  117 (309)
                      ..|+.|+||+||.+.- ++..++.+.+.....-.+     .+.+|+++|++|. ++++++++++   ...+++|+|+.|.
T Consensus         8 ~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~---~~~~lvmeyI~G~   83 (218)
T PRK12274          8 EPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW---DGRHLDRSYLAGA   83 (218)
T ss_pred             eeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE---cCEEEEEeeecCc
Confidence            5799999999997765 677787777754443222     5789999999995 5889999886   3468999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeeccc-CCCceeeCCCCceeEeccccccccccc------
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSI-SSSSIMLDENFTAKLSDVGFFNSVRNY------  190 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl-~p~nill~~~~~~kl~dfg~~~~~~~~------  190 (309)
                      +|.+.+..   .      ...++.+++.+|.++   |..|++|||| ||.||+++.++.++|+|||++......      
T Consensus        84 ~L~~~~~~---~------~~~~~~qi~~~L~~l---H~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~  151 (218)
T PRK12274         84 AMYQRPPR---G------DLAYFRAARRLLQQL---HRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRL  151 (218)
T ss_pred             cHHhhhhh---h------hHHHHHHHHHHHHHH---HHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHH
Confidence            99765421   1      135678999999999   8889999999 799999999999999999998743321      


Q ss_pred             --------------CCCCCCCCCCCCC---CC-CCCCcEeehhhHHHHHHhCCCCCCCC
Q 021659          191 --------------ATMPHSSCPEDCS---TQ-DCSNIIFQLGVLILELVTGQSPEEGD  231 (309)
Q Consensus       191 --------------~~~~~~~~PE~~~---~~-~~~~Dv~slG~~l~~l~tg~~p~~~~  231 (309)
                                    ..++.+..|+...   .. ..+.+-++.|+-+|.++|+..|.-++
T Consensus       152 L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~  210 (218)
T PRK12274        152 LAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED  210 (218)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence                          1244555554311   12 24566679999999999999986443

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.79  E-value=7e-19  Score=161.02  Aligned_cols=206  Identities=19%  Similarity=0.214  Sum_probs=151.9

Q ss_pred             HccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCC
Q 021659           87 LGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISS  165 (309)
Q Consensus        87 l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p  165 (309)
                      |+++.|.|+.+++|.+.+ ...+.|.+||..|+|.+.+.. ....+++--...++.++++|+.|+|  ++....||.+++
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh--~s~i~~hg~l~s   77 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLH--NSPIGYHGALKS   77 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHh--cCcceeeeeecc
Confidence            467899999999998765 566688899999999999976 3577888889999999999999996  333349999999


Q ss_pred             CceeeCCCCceeEecccccccccc----c-----CCCCCCCCCCCCCC---------CCCCCcEeehhhHHHHHHhCCCC
Q 021659          166 SSIMLDENFTAKLSDVGFFNSVRN----Y-----ATMPHSSCPEDCST---------QDCSNIIFQLGVLILELVTGQSP  227 (309)
Q Consensus       166 ~nill~~~~~~kl~dfg~~~~~~~----~-----~~~~~~~~PE~~~~---------~~~~~Dv~slG~~l~~l~tg~~p  227 (309)
                      .|-+++....+|+.|||+......    .     ....-|.+||..+.         .+.+.|+||||++++|+++++.|
T Consensus        78 ~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~  157 (484)
T KOG1023|consen   78 SNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGP  157 (484)
T ss_pred             ccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCc
Confidence            999999999999999999765532    1     11135779996544         35679999999999999999999


Q ss_pred             CCCCccH---HHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccc
Q 021659          228 EEGDVDL---IQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQ  299 (309)
Q Consensus       228 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~  299 (309)
                      |......   ...+.....  .....+.|.+....  .....+..++.+||..+|..||++..+-..++.+....
T Consensus       158 ~~~~~~~~~~~eii~~~~~--~~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~  228 (484)
T KOG1023|consen  158 FDLRNLVEDPDEIILRVKK--GGSNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKGG  228 (484)
T ss_pred             cccccccCChHHHHHHHHh--cCCCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcccc
Confidence            9752111   111111111  11222233332111  11225777777999999999999999999998776654

>PRK10345 hypothetical protein; Provisional

Probab=99.78  E-value=2.6e-18  Score=143.25  Aligned_cols=129  Identities=13%  Similarity=0.123  Sum_probs=99.8

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccc-cccHHHHHHHHHHHccC-----CCCCcceEeeeEeCC----eeE-EEEe
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQAL-NLEKDAFYREIQLLGRL-----HHRHLLALQGFSTGR----KRL-LVFD  112 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~-~~~~~~~~~ei~~l~~l-----~h~niv~~~~~~~~~----~~~-lv~e  112 (309)
                      +.||+|+++.||. ...++.. ++|++... ....+.+.+|+..++++     .||||++++|++..+    ..+ +|+|
T Consensus         8 ~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e   85 (210)
T PRK10345          8 SPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIAD   85 (210)
T ss_pred             ceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEec
Confidence            5799999999996 3234444 68887543 22456789999999999     579999999977543    333 7899


Q ss_pred             e--CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHH-hhhhhcCCCCeeecccCCCceeeCC----CCceeEeccc
Q 021659          113 N--IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAAL-EYLLLFSNLPMYYVSISSSSIMLDE----NFTAKLSDVG  182 (309)
Q Consensus       113 ~--~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l-~~lh~~h~~~i~H~dl~p~nill~~----~~~~kl~dfg  182 (309)
                      |  +.+++|.+++..   ..+++.  ..++.+++.++ .||   |+.+|+|+||||+||+++.    +..++|+||+
T Consensus        86 ~~G~~~~tL~~~l~~---~~~~e~--~~~~~~~L~~l~~yL---h~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~  154 (210)
T PRK10345         86 FDGKPSITLTEFAEQ---CRYEED--VAQLRQLLKKLKRYL---LDNRIVTMELKPQNILCQRISESEVIPVVCDNI  154 (210)
T ss_pred             CCCCcchhHHHHHHc---ccccHh--HHHHHHHHHHHHHHH---HHCCEeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence            9  557899999975   346555  35678888787 899   8889999999999999974    3479999954

>smart00090 RIO RIO-like kinase

Probab=99.76  E-value=4.8e-18  Score=144.86  Aligned_cols=137  Identities=16%  Similarity=0.123  Sum_probs=106.3

Q ss_pred             ccccccCCCceEEEEE--EcCCcEEEEEEecccccc-------------------------HHHHHHHHHHHccCCCC--
Q 021659           43 HRIVYTNSHGAAYKAR--FQDGEVALVKEIQALNLE-------------------------KDAFYREIQLLGRLHHR--   93 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~--~~~~~~va~K~~~~~~~~-------------------------~~~~~~ei~~l~~l~h~--   93 (309)
                      .+.||+|++|.||+|.  ..+|+.||+|.+......                         ...+..|+..++++.+.  
T Consensus        33 ~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~~i  112 (237)
T smart00090       33 GGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEAGV  112 (237)
T ss_pred             CCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            3689999999999998  467899999998543210                         12356899999999753  


Q ss_pred             CcceEeeeEeCCeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCC-eeecccCCCceeeCC
Q 021659           94 HLLALQGFSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLP-MYYVSISSSSIMLDE  172 (309)
Q Consensus        94 niv~~~~~~~~~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~-i~H~dl~p~nill~~  172 (309)
                      .+..++++   ...++||||+++.+|......  ...+....+..++.+++.++.+|   |..+ ++||||||+||+++ 
T Consensus       113 ~~p~~~~~---~~~~lV~E~~~g~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~L---H~~g~iiH~Dikp~NIli~-  183 (237)
T smart00090      113 PVPKPIAW---RRNVLVMEFIGGDGLPAPRLK--DVEPEEEEEFELYDDILEEMRKL---YKEGELVHGDLSEYNILVH-  183 (237)
T ss_pred             CCCeeeEe---cCceEEEEEecCCcccccccc--cCCcchHHHHHHHHHHHHHHHHH---HhcCCEEeCCCChhhEEEE-
Confidence            33444443   235899999999888776533  34566667789999999999999   7888 99999999999999 


Q ss_pred             CCceeEeccccccccc
Q 021659          173 NFTAKLSDVGFFNSVR  188 (309)
Q Consensus       173 ~~~~kl~dfg~~~~~~  188 (309)
                      ++.++++|||.+....
T Consensus       184 ~~~i~LiDFg~a~~~~  199 (237)
T smart00090      184 DGKVVIIDVSQSVELD  199 (237)
T ss_pred             CCCEEEEEChhhhccC
Confidence            8899999999876433

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.76  E-value=9.7e-19  Score=150.88  Aligned_cols=219  Identities=16%  Similarity=0.155  Sum_probs=132.1

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccCCC----------CCcceEee--------
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRLHH----------RHLLALQG--------  100 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h----------~niv~~~~--------  100 (309)
                      +.||.|+++.||.++.. .++.+|+|++-...    .+.+.+.+|.-....+.+          -.++..++        
T Consensus        18 ~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~~   97 (288)
T PF14531_consen   18 RIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGKP   97 (288)
T ss_dssp             EEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS-
T ss_pred             cccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCCC
Confidence            47999999999999984 48999999983222    223455555544433321          12222222        


Q ss_pred             -eEe---CC------eeEEEEeeCCCCCHHHhhcC---CCC--CCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCC
Q 021659          101 -FST---GR------KRLLVFDNIENGSLKEHLND---PLK--TPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISS  165 (309)
Q Consensus       101 -~~~---~~------~~~lv~e~~~~~sL~~~i~~---~~~--~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p  165 (309)
                       +..   +.      +.+++|+-+. ++|.+.+..   ...  ..+....++.+..|+++.+++|   |..|++|+||+|
T Consensus        98 ~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~L---h~~GlVHgdi~~  173 (288)
T PF14531_consen   98 PFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANL---HSYGLVHGDIKP  173 (288)
T ss_dssp             SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHH---HHTTEEEST-SG
T ss_pred             cceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHH---hhcceEecccce
Confidence             111   11      2345666664 488887642   111  2233445567779999999999   888999999999


Q ss_pred             CceeeCCCCceeEecccccccccc----cCCCCCCCCCCCCC----------CCCCCCcEeehhhHHHHHHhCCCCCCCC
Q 021659          166 SSIMLDENFTAKLSDVGFFNSVRN----YATMPHSSCPEDCS----------TQDCSNIIFQLGVLILELVTGQSPEEGD  231 (309)
Q Consensus       166 ~nill~~~~~~kl~dfg~~~~~~~----~~~~~~~~~PE~~~----------~~~~~~Dv~slG~~l~~l~tg~~p~~~~  231 (309)
                      +|++++.+|.++|+||+.....+.    ...+..|.+||...          ..+++.|.|+||+++|.++|+..||...
T Consensus       174 ~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~  253 (288)
T PF14531_consen  174 ENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLS  253 (288)
T ss_dssp             GGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCC
T ss_pred             eeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCC
Confidence            999999999999999987643332    33456788888421          2367899999999999999999999754


Q ss_pred             ccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCC
Q 021659          232 VDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPT  282 (309)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~R  282 (309)
                      ...       ..    .+.    .-..+. +....+..++..+|++||.+|
T Consensus       254 ~~~-------~~----~~~----~f~~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  254 SPE-------AD----PEW----DFSRCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             GGG-------ST----SGG----GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred             Ccc-------cc----ccc----cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence            210       00    000    112233 444556666669999999887

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.74  E-value=6.1e-19  Score=161.94  Aligned_cols=219  Identities=21%  Similarity=0.247  Sum_probs=171.9

Q ss_pred             cccCCCceEEEEEE----cCCcEEEEEEecccccc---HHHHHHHHHHHccCC-CCCcceEee-eEeCCeeEEEEeeCCC
Q 021659           46 VYTNSHGAAYKARF----QDGEVALVKEIQALNLE---KDAFYREIQLLGRLH-HRHLLALQG-FSTGRKRLLVFDNIEN  116 (309)
Q Consensus        46 lg~G~~~~v~~~~~----~~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~-h~niv~~~~-~~~~~~~~lv~e~~~~  116 (309)
                      +|+|++|.|+.+..    ..+..+|+|++......   +.....|..++...+ ||.++.+.- +..+...++++++..+
T Consensus         2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg   81 (612)
T KOG0603|consen    2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG   81 (612)
T ss_pred             CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence            68999999998872    45778999988543321   124556778888886 999999876 4556888999999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---ccCCC
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---NYATM  193 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---~~~~~  193 (309)
                      |.|...+..  ...+++..+..+...++-+++++   |+.+++++|+|+.||+++.+|.+++.|||+++..-   ...|+
T Consensus        82 g~lft~l~~--~~~f~~~~~~~~~aelaLald~l---h~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt  156 (612)
T KOG0603|consen   82 GDLFTRLSK--EVMFDELDVAFYLAELALALDHL---HKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGT  156 (612)
T ss_pred             chhhhcccc--CCchHHHHHHHHHHHHHHHHhhc---chhHHHHhcccccceeecccCccccCCchhhhHhHhhhhcccc
Confidence            999888876  67888999999999999999999   99999999999999999999999999999987442   23679


Q ss_pred             CCCCCCCCCCCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHH
Q 021659          194 PHSSCPEDCSTQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARL  273 (309)
Q Consensus       194 ~~~~~PE~~~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~  273 (309)
                      .-|+|||..++...++|-||||++.++|+||-.||.+  +....+...            .+  ..+.........++.+
T Consensus       157 ~eymApEI~~gh~~a~D~ws~gvl~felltg~~pf~~--~~~~~Il~~------------~~--~~p~~l~~~a~~~~~~  220 (612)
T KOG0603|consen  157 YEYRAPEIINGHLSAADWWSFGVLAFELLTGTLPFGG--DTMKRILKA------------EL--EMPRELSAEARSLFRQ  220 (612)
T ss_pred             hhhhhhHhhhccCCcccchhhhhhHHHHhhCCCCCch--HHHHHHhhh------------cc--CCchhhhHHHHHHHHH
Confidence            9999999988888999999999999999999999987  222222111            11  1122223344455558


Q ss_pred             ccCCCCCCCCCh
Q 021659          274 CIKTKDKPTISI  285 (309)
Q Consensus       274 cl~~dp~~Rps~  285 (309)
                      ++..+|..|.-.
T Consensus       221 l~~r~p~nrLg~  232 (612)
T KOG0603|consen  221 LFKRNPENRLGA  232 (612)
T ss_pred             HHhhCHHHHhcc
Confidence            888999988755

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.74  E-value=1.1e-17  Score=163.35  Aligned_cols=232  Identities=15%  Similarity=0.180  Sum_probs=160.2

Q ss_pred             cccccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCC---CCCcceEeee-EeCCeeEEEEeeCCCC
Q 021659           42 FHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLH---HRHLLALQGF-STGRKRLLVFDNIENG  117 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~---h~niv~~~~~-~~~~~~~lv~e~~~~~  117 (309)
                      +++.+|+|+||+||.|...+|+.+|+|+-......  +|.--.+++.+|+   -+-|.++... ...+..++|+||.+-|
T Consensus       702 I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W--EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~~~G  779 (974)
T KOG1166|consen  702 ISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW--EFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYSPYG  779 (974)
T ss_pred             EEeeeccccceEEEEeecCCCcEEEEEeecCCCce--eeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeeccccc
Confidence            34689999999999999878999999976433321  2211122233333   2344444442 2235678999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC-------CCceeEecccccccc---
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE-------NFTAKLSDVGFFNSV---  187 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~-------~~~~kl~dfg~~~~~---  187 (309)
                      ||.++++.  ....++..+..++.+++..++.|   |..+||||||||+|+||..       .-.++|+|||-+..+   
T Consensus       780 tlld~~N~--~~~m~e~lv~~~~~qml~ive~l---H~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lf  854 (974)
T KOG1166|consen  780 TLLDLINT--NKVMDEYLVMFFSCQMLRIVEHL---HAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLF  854 (974)
T ss_pred             cHHHhhcc--CCCCCchhhhHHHHHHHHHHHHH---HhcceecccCCcceeEeecccCCCCcccceEEEecccceeeeEc
Confidence            99999995  78899999999999999999999   8889999999999999942       346899999987422   


Q ss_pred             ------cccCCCCCCCCCCC--CCCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCC
Q 021659          188 ------RNYATMPHSSCPED--CSTQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSY  259 (309)
Q Consensus       188 ------~~~~~~~~~~~PE~--~~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  259 (309)
                            .....|-.+-++|.  .+..+++.|.|.|..+++.|+.|+.--              ..+.....+++.+++-+
T Consensus       855 p~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q--------------~~~g~~~~~~~~~~Ry~  920 (974)
T KOG1166|consen  855 PDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME--------------VKNGSSWMVKTNFPRYW  920 (974)
T ss_pred             CCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH--------------hcCCcceeccccchhhh
Confidence                  12245566778885  344589999999999999999987631              00111112222233222


Q ss_pred             CHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          260 DSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       260 ~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                      .-+.+..+..   .+|.+|-..=|...++...+++.++
T Consensus       921 ~~~~W~~~F~---~lLN~~~~~~p~l~~lr~~~~~~~~  955 (974)
T KOG1166|consen  921 KRDMWNKFFD---LLLNPDCDTLPNLQELRTELEEVLA  955 (974)
T ss_pred             hHHHHHHHHH---HHhCcCcccchhHHHHHHHHHHHHH
Confidence            3344555555   6666666666777777777766543

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.74  E-value=2e-17  Score=138.87  Aligned_cols=132  Identities=16%  Similarity=0.229  Sum_probs=107.3

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccc---------cHHHHHHHHHHHccCCCCCcceEeeeE-eCCeeEEEEee
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNL---------EKDAFYREIQLLGRLHHRHLLALQGFS-TGRKRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~---------~~~~~~~ei~~l~~l~h~niv~~~~~~-~~~~~~lv~e~  113 (309)
                      +.||+|++|.||+|.. .+..+++|.......         ....+.+|++++..+.|+++.....++ .....+++|||
T Consensus         2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   80 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY   80 (211)
T ss_pred             cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence            4689999999999987 566788887642211         123577899999999998887666644 44667899999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccc
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNS  186 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~  186 (309)
                      ++|++|.+.+...  .   . .+..++.+++.+|.++   |..+++|||++|.||+++ ++.++++|||.+..
T Consensus        81 ~~G~~L~~~~~~~--~---~-~~~~i~~~i~~~l~~l---H~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         81 IEGEPLKDLINSN--G---M-EELELSREIGRLVGKL---HSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             eCCcCHHHHHHhc--c---H-HHHHHHHHHHHHHHHH---HhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            9999999998652  1   1 7889999999999999   788999999999999998 78899999998654

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.72  E-value=5.9e-17  Score=134.79  Aligned_cols=131  Identities=13%  Similarity=0.026  Sum_probs=102.6

Q ss_pred             ccccccCCCceEEEEEEcCCcEEEEEEecccccc-----------------------HHHHHHHHHHHccCCCCC--cce
Q 021659           43 HRIVYTNSHGAAYKARFQDGEVALVKEIQALNLE-----------------------KDAFYREIQLLGRLHHRH--LLA   97 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~-----------------------~~~~~~ei~~l~~l~h~n--iv~   97 (309)
                      .+.||+|++|.||++...+|+.||+|++......                       ......|+..+..+.+++  +..
T Consensus        20 ~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~v~~   99 (198)
T cd05144          20 GNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFPVPK   99 (198)
T ss_pred             CCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCCCCc
Confidence            4689999999999999888999999987432210                       113567888888887764  344


Q ss_pred             EeeeEeCCeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCcee
Q 021659           98 LQGFSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAK  177 (309)
Q Consensus        98 ~~~~~~~~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~k  177 (309)
                      .++   ....++||||+++++|......        .....++.+++.++.++   |..+++|+||+|+||+++.++.++
T Consensus       100 ~~~---~~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~l---h~~gi~H~Dl~p~Nill~~~~~~~  165 (198)
T cd05144         100 PID---WNRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKA---YKHGIIHGDLSEFNILVDDDEKIY  165 (198)
T ss_pred             eee---cCCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHH---HHCCCCcCCCCcccEEEcCCCcEE
Confidence            443   2345899999999999776431        23567889999999999   678999999999999999999999


Q ss_pred             Eecccccccc
Q 021659          178 LSDVGFFNSV  187 (309)
Q Consensus       178 l~dfg~~~~~  187 (309)
                      |+|||.+...
T Consensus       166 liDfg~~~~~  175 (198)
T cd05144         166 IIDWPQMVST  175 (198)
T ss_pred             EEECCccccC
Confidence            9999987543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.71  E-value=8.1e-17  Score=140.72  Aligned_cols=170  Identities=15%  Similarity=0.103  Sum_probs=117.6

Q ss_pred             eeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeC--CC--CceeEecc
Q 021659          106 KRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLD--EN--FTAKLSDV  181 (309)
Q Consensus       106 ~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~--~~--~~~kl~df  181 (309)
                      ..|+||.-.+. +|++++-.   ...+.....-++.|+++|+.||   |++|+.|||+|.+||++.  .+  ..+.++||
T Consensus       317 tlylvMkrY~~-tLr~yl~~---~~~s~r~~~~~laQlLEav~hL---~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDF  389 (598)
T KOG4158|consen  317 TLYLVMKRYRQ-TLREYLWT---RHRSYRTGRVILAQLLEAVTHL---HKHGVAHRDLKSDNILLELDDDEIPQLVVADF  389 (598)
T ss_pred             eEEEehhcchh-hHHHHHhc---CCCchHHHHHHHHHHHHHHHHH---HHccchhhcccccceEEEecCCCCcEEEEccc
Confidence            35788887766 99999975   5566677788899999999999   889999999999999983  33  45789999


Q ss_pred             ccccc----------cc---ccCCCCCCCCCCCCCCC--------CCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHH
Q 021659          182 GFFNS----------VR---NYATMPHSSCPEDCSTQ--------DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQE  240 (309)
Q Consensus       182 g~~~~----------~~---~~~~~~~~~~PE~~~~~--------~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~  240 (309)
                      |.+--          .+   +..|....+|||.....        -.++|.|+.|.+.||++...+||.+.-...-....
T Consensus       390 GCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~  469 (598)
T KOG4158|consen  390 GCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRT  469 (598)
T ss_pred             ceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhh
Confidence            97621          11   12355567899975432        25799999999999999999999763221111111


Q ss_pred             hcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHH
Q 021659          241 SSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYL  292 (309)
Q Consensus       241 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L  292 (309)
                      +.+      -.-|.++..+++    .+.+++...|++||.+|++..=..+.|
T Consensus       470 Yqe------~qLPalp~~vpp----~~rqlV~~lL~r~pskRvsp~iAANvl  511 (598)
T KOG4158|consen  470 YQE------SQLPALPSRVPP----VARQLVFDLLKRDPSKRVSPNIAANVL  511 (598)
T ss_pred             hhh------hhCCCCcccCCh----HHHHHHHHHhcCCccccCCccHHHhHH
Confidence            111      111333333333    334556689999999999876444333

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.70  E-value=9.2e-17  Score=133.61  Aligned_cols=128  Identities=16%  Similarity=0.224  Sum_probs=100.7

Q ss_pred             ccccCCCceEEEEEEcCCcEEEEEEecccc--c-------cHHHHHHHHHHHccCCCCCcceEeee-EeCCeeEEEEeeC
Q 021659           45 IVYTNSHGAAYKARFQDGEVALVKEIQALN--L-------EKDAFYREIQLLGRLHHRHLLALQGF-STGRKRLLVFDNI  114 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~~~~~va~K~~~~~~--~-------~~~~~~~ei~~l~~l~h~niv~~~~~-~~~~~~~lv~e~~  114 (309)
                      .||+|++|.||++.+ ++..+++|......  .       ...++.+|++++..++|+++.....+ ..+...+++|||+
T Consensus         1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   79 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI   79 (199)
T ss_pred             CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence            489999999999986 46778888763211  1       12456789999999988765444333 3345668999999


Q ss_pred             CCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccc
Q 021659          115 ENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNS  186 (309)
Q Consensus       115 ~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~  186 (309)
                      +|++|.+.+...  ..       .++.+++.+|.++   |+.+++|||++|.||+++ ++.++++|||++..
T Consensus        80 ~g~~l~~~~~~~--~~-------~~~~~i~~~l~~l---H~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724        80 EGKPLKDVIEEG--ND-------ELLREIGRLVGKL---HKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             CCccHHHHHhhc--HH-------HHHHHHHHHHHHH---HHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence            999999987641  11       7899999999999   888999999999999998 88999999998754

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.69  E-value=1.7e-16  Score=151.25  Aligned_cols=129  Identities=12%  Similarity=0.174  Sum_probs=103.2

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEecccc--------ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeC
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALN--------LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNI  114 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~--------~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~  114 (309)
                      +.||+|+||.||++.+.+...++.+......        ...+++.+|+++++.++|++++....++.. ...++||||+
T Consensus       339 ~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E~~  418 (535)
T PRK09605        339 HLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVMEYI  418 (535)
T ss_pred             ceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEEec
Confidence            5799999999999997655443333222111        112467899999999999999887665543 5678999999


Q ss_pred             CCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccc
Q 021659          115 ENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNS  186 (309)
Q Consensus       115 ~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~  186 (309)
                      ++++|.+++.          ....++.+++.+|.+|   |+.+++||||||+||++ .++.++|+|||++..
T Consensus       419 ~g~~L~~~l~----------~~~~~~~~i~~~L~~l---H~~giiHrDlkp~NILl-~~~~~~liDFGla~~  476 (535)
T PRK09605        419 GGKDLKDVLE----------GNPELVRKVGEIVAKL---HKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY  476 (535)
T ss_pred             CCCcHHHHHH----------HHHHHHHHHHHHHHHH---HhCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence            9999999874          3567899999999999   78899999999999999 678999999999865

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.64  E-value=2.7e-15  Score=118.25  Aligned_cols=131  Identities=17%  Similarity=0.139  Sum_probs=108.0

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCC--CCcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHH--RHLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h--~niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      +.++.|.++.||++...+ ..+++|....... ...+..|+..++.+++  .++++++++... ...++++||++++++.
T Consensus         4 ~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~   81 (155)
T cd05120           4 KLLKGGLTNRVYLLGTKD-EDYVLKINPSREK-GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLD   81 (155)
T ss_pred             eecccccccceEEEEecC-CeEEEEecCCCCc-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecc
Confidence            568999999999999854 6788998754433 5678899999999975  588888886654 5678999999987775


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccc
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFN  185 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~  185 (309)
                      .+         +......++.+++.++..+|..+..+++|+|++|.|++++..+.++++|||.+.
T Consensus        82 ~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~  137 (155)
T cd05120          82 EV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAG  137 (155)
T ss_pred             cC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEeccccc
Confidence            54         456667789999999999976556789999999999999998999999999865

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.61  E-value=5.4e-15  Score=121.70  Aligned_cols=133  Identities=18%  Similarity=0.149  Sum_probs=94.2

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccccH---HHH----------------------HHHHHHHccCCCC--Ccc
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEK---DAF----------------------YREIQLLGRLHHR--HLL   96 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~---~~~----------------------~~ei~~l~~l~h~--niv   96 (309)
                      +.||+|++|.||++...+++.||+|++.......   ..+                      ..|.+.+.++.+.  .+.
T Consensus         3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~   82 (187)
T cd05119           3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPVP   82 (187)
T ss_pred             cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCCC
Confidence            5799999999999998789999999885432211   111                      2455555555432  233


Q ss_pred             eEeeeEeCCeeEEEEeeCCCCCHHHh-hcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCC-CCeeecccCCCceeeCCCC
Q 021659           97 ALQGFSTGRKRLLVFDNIENGSLKEH-LNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSN-LPMYYVSISSSSIMLDENF  174 (309)
Q Consensus        97 ~~~~~~~~~~~~lv~e~~~~~sL~~~-i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~-~~i~H~dl~p~nill~~~~  174 (309)
                      ..+++   ...++||||++++++... +..   .... .....++.+++.++.++   |. .+++|+||+|+||+++ ++
T Consensus        83 ~~~~~---~~~~lv~e~~~g~~~~~~~l~~---~~~~-~~~~~~~~~~~~~l~~l---h~~~~ivH~Dl~p~Nili~-~~  151 (187)
T cd05119          83 KPIDL---NRHVLVMEFIGGDGIPAPRLKD---VRLL-EDPEELYDQILELMRKL---YREAGLVHGDLSEYNILVD-DG  151 (187)
T ss_pred             ceEec---CCCEEEEEEeCCCCccChhhhh---hhhc-ccHHHHHHHHHHHHHHH---hhccCcCcCCCChhhEEEE-CC
Confidence            34432   245899999998543221 111   0011 56788999999999999   66 8999999999999999 88


Q ss_pred             ceeEecccccccc
Q 021659          175 TAKLSDVGFFNSV  187 (309)
Q Consensus       175 ~~kl~dfg~~~~~  187 (309)
                      .++++|||.+...
T Consensus       152 ~~~liDfg~a~~~  164 (187)
T cd05119         152 KVYIIDVPQAVEI  164 (187)
T ss_pred             cEEEEECcccccc
Confidence            9999999987543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.60  E-value=9.4e-15  Score=124.83  Aligned_cols=132  Identities=17%  Similarity=0.214  Sum_probs=101.7

Q ss_pred             cccc-cCCCceEEEEEEcCCcEEEEEEecccc--------------ccHHHHHHHHHHHccCCCCCc--ceEeeeEeC--
Q 021659           44 RIVY-TNSHGAAYKARFQDGEVALVKEIQALN--------------LEKDAFYREIQLLGRLHHRHL--LALQGFSTG--  104 (309)
Q Consensus        44 ~~lg-~G~~~~v~~~~~~~~~~va~K~~~~~~--------------~~~~~~~~ei~~l~~l~h~ni--v~~~~~~~~--  104 (309)
                      ..+| .|+.|+||.+... ++.+++|.+....              .....+.+|++++.+|+|+++  +..+++...  
T Consensus        37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~  115 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH  115 (239)
T ss_pred             ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence            4687 8999999999875 6677888774211              123467889999999988775  666665321  


Q ss_pred             C---eeEEEEeeCCC-CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEec
Q 021659          105 R---KRLLVFDNIEN-GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSD  180 (309)
Q Consensus       105 ~---~~~lv~e~~~~-~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~d  180 (309)
                      .   ..++|+|++++ .+|.+++..   ..++..    .+.+++.++.+|   |..||+|+||||.|||++.++.++|+|
T Consensus       116 ~~~~~~~lV~e~l~G~~~L~~~l~~---~~l~~~----~~~~i~~~l~~l---H~~GI~HrDlkp~NILv~~~~~v~LID  185 (239)
T PRK01723        116 GLFYRADILIERIEGARDLVALLQE---APLSEE----QWQAIGQLIARF---HDAGVYHADLNAHNILLDPDGKFWLID  185 (239)
T ss_pred             CcceeeeEEEEecCCCCCHHHHHhc---CCCCHH----HHHHHHHHHHHH---HHCCCCCCCCCchhEEEcCCCCEEEEE
Confidence            2   23599999997 699998864   345543    357889999999   889999999999999999888999999


Q ss_pred             cccccc
Q 021659          181 VGFFNS  186 (309)
Q Consensus       181 fg~~~~  186 (309)
                      ||.+..
T Consensus       186 fg~~~~  191 (239)
T PRK01723        186 FDRGEL  191 (239)
T ss_pred             CCCccc
Confidence            998754

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.48  E-value=1.3e-14  Score=138.63  Aligned_cols=236  Identities=18%  Similarity=0.177  Sum_probs=167.9

Q ss_pred             cccccccCCCceEEEEEEc--CCcEEEEEEecccccc---HHHHHHHHHHHccCC-CCCcceEeeeEeC-CeeEEEEeeC
Q 021659           42 FHRIVYTNSHGAAYKARFQ--DGEVALVKEIQALNLE---KDAFYREIQLLGRLH-HRHLLALQGFSTG-RKRLLVFDNI  114 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~--~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~-h~niv~~~~~~~~-~~~~lv~e~~  114 (309)
                      +.+.||+|+++.|-.....  ....+|.|.+......   ......|..+-+.+. |+|++..++...+ ...++.+++.
T Consensus        24 ~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s  103 (601)
T KOG0590|consen   24 LSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYS  103 (601)
T ss_pred             ccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccccCcc
Confidence            3456899999998877752  2445666665433222   234455777777776 9999999997765 5566888999


Q ss_pred             CCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcC-CCCeeecccCCCceeeCCCC-ceeEecccccccccc---
Q 021659          115 ENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFS-NLPMYYVSISSSSIMLDENF-TAKLSDVGFFNSVRN---  189 (309)
Q Consensus       115 ~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h-~~~i~H~dl~p~nill~~~~-~~kl~dfg~~~~~~~---  189 (309)
                      +++++.+-+........+...+..++.|+..++.|+   | ..++.|+|++|+|.+++..+ .++++|||++.....   
T Consensus       104 ~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~---H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g  180 (601)
T KOG0590|consen  104 DGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYL---HPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNG  180 (601)
T ss_pred             cccccccccccCCccCCCCcchhhhhhhhccCcccc---CcccccccCCCCCccchhccCCCcccCCCchhhccccccCC
Confidence            999999888321122566677888999999999999   7 89999999999999999999 999999999865443   


Q ss_pred             -------cCC-CCCCCCCCCCCCC---CCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCC--
Q 021659          190 -------YAT-MPHSSCPEDCSTQ---DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLG--  256 (309)
Q Consensus       190 -------~~~-~~~~~~PE~~~~~---~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--  256 (309)
                             ..+ ++.|.+||...+.   .+..|+||.|+++..+++|..|+.......         +....+......  
T Consensus       181 ~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~---------~~~~~~~~~~~~~~  251 (601)
T KOG0590|consen  181 AERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD---------GRYSSWKSNKGRFT  251 (601)
T ss_pred             cceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc---------ccceeecccccccc
Confidence                   356 8899999976553   788999999999999999999986432211         111111111100  


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHH
Q 021659          257 GSYDSKELKKLLAVARLCIKTKDKPTISIPQIS  289 (309)
Q Consensus       257 ~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl  289 (309)
                      ......-......++.+++..+|..|.+..++-
T Consensus       252 ~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~  284 (601)
T KOG0590|consen  252 QLPWNSISDQAHDLLHKILKENPSNRLSIEELK  284 (601)
T ss_pred             cCccccCChhhhhcccccccCCchhcccccccc
Confidence            001111123344555588889999999988764

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.46  E-value=2.6e-14  Score=129.30  Aligned_cols=163  Identities=18%  Similarity=0.206  Sum_probs=115.9

Q ss_pred             eeEEEEeeCCCCCHHHhhcC-CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccc
Q 021659          106 KRLLVFDNIENGSLKEHLND-PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFF  184 (309)
Q Consensus       106 ~~~lv~e~~~~~sL~~~i~~-~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~  184 (309)
                      ..|+.|++|...+|.+.+.. ......++...+.+..|+..|+.|      ++.+|+|+||.||+...+..+||+|||+.
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl~  403 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGLV  403 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhhe
Confidence            46789999999999999974 234567778889999999999988      68999999999999999999999999986


Q ss_pred             ccc-------------cccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhccccccc
Q 021659          185 NSV-------------RNYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIH  248 (309)
Q Consensus       185 ~~~-------------~~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~  248 (309)
                      ...             ....+|.-|++||...  .++.++||||||++|+|++. -.-++.    -.... .....+   
T Consensus       404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e----r~~t~-~d~r~g---  475 (516)
T KOG1033|consen  404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE----RIATL-TDIRDG---  475 (516)
T ss_pred             eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH----HHHhh-hhhhcC---
Confidence            432             2346889999999754  46899999999999999987 222221    00000 111112   


Q ss_pred             ccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHH
Q 021659          249 RMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQI  288 (309)
Q Consensus       249 ~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~ev  288 (309)
                       .++|....+++  +-.   .++.+++.+.|.+||++.++
T Consensus       476 -~ip~~~~~d~p--~e~---~ll~~lls~~p~~RP~~~~~  509 (516)
T KOG1033|consen  476 -IIPPEFLQDYP--EEY---TLLQQLLSPSPEERPSAIEV  509 (516)
T ss_pred             -CCChHHhhcCc--HHH---HHHHHhcCCCcccCchHHHH
Confidence             22222211111  112   45559999999999955443

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.45  E-value=1.8e-13  Score=132.48  Aligned_cols=198  Identities=20%  Similarity=0.275  Sum_probs=128.3

Q ss_pred             cccc--cccccCCCceEEEEEEcC-CcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCC
Q 021659           40 DGFH--RIVYTNSHGAAYKARFQD-GEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIEN  116 (309)
Q Consensus        40 ~~~~--~~lg~G~~~~v~~~~~~~-~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~  116 (309)
                      .+|.  +.+..|++|.||.++++. .+..|+| +.+...          +++     ||..+-+     +.+.|      
T Consensus        83 ~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~l----------ilR-----nilt~a~-----npfvv------  135 (1205)
T KOG0606|consen   83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL----------ILR-----NILTFAG-----NPFVV------  135 (1205)
T ss_pred             cccceeEeeccCCCCceeeeeccccccchhhc-ccccch----------hhh-----ccccccC-----Cccee------
Confidence            4454  578999999999998754 3456664 322221          111     2222221     22222      


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc--------
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR--------  188 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~--------  188 (309)
                      |+=.+.++.  .+.++..        .+.+++|+   |..||+|+|+||+|++|+.-|.+|+.|||+++...        
T Consensus       136 gDc~tllk~--~g~lPvd--------mvla~Eyl---h~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~  202 (1205)
T KOG0606|consen  136 GDCATLLKN--IGPLPVD--------MVLAVEYL---HSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLK  202 (1205)
T ss_pred             chhhhhccc--CCCCcch--------hhHHhHhh---ccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhh
Confidence            344444443  2333322        26789999   89999999999999999999999999999875321        


Q ss_pred             --------------ccCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccccccccc
Q 021659          189 --------------NYATMPHSSCPEDC--STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMID  252 (309)
Q Consensus       189 --------------~~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  252 (309)
                                    ...+|+.|.|||..  .+++...|=|++|+++|+++.|..||.+++.---.-.-.......++- |
T Consensus       203 eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~-d  281 (1205)
T KOG0606|consen  203 EGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEE-D  281 (1205)
T ss_pred             hcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcccccc-C
Confidence                          23689999999963  556888999999999999999999998874321111111111111111 2


Q ss_pred             CcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChH
Q 021659          253 PDLGGSYDSKELKKLLAVARLCIKTKDKPTISIP  286 (309)
Q Consensus       253 ~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~  286 (309)
                      .     ....+.+++++   +.|+.+|.+|.-..
T Consensus       282 e-----a~p~Ea~dli~---~LL~qnp~~Rlgt~  307 (1205)
T KOG0606|consen  282 E-----ALPPEAQDLIE---QLLRQNPLCRLGTG  307 (1205)
T ss_pred             c-----CCCHHHHHHHH---HHHHhChHhhcccc
Confidence            2     23345555555   99999999998544

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.42  E-value=7.3e-13  Score=107.07  Aligned_cols=129  Identities=14%  Similarity=0.027  Sum_probs=92.7

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcc-eEeeeEeCCeeEEEEeeCCCCCHHHh
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLL-ALQGFSTGRKRLLVFDNIENGSLKEH  122 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv-~~~~~~~~~~~~lv~e~~~~~sL~~~  122 (309)
                      +.++.|..+.||++... ++.+++|...........+..|+..++.+.+.+++ .++.+. ....++|||++++.++.+.
T Consensus         4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~-~~~~~lv~e~i~G~~l~~~   81 (170)
T cd05151           4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFD-PETGVLITEFIEGSELLTE   81 (170)
T ss_pred             eecCCcccCceEEEEEC-CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEe-CCCCeEEEEecCCCccccc
Confidence            45788999999999875 66789998754432233467899999988654443 445443 3446899999999887653


Q ss_pred             hcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcC--CCCeeecccCCCceeeCCCCceeEecccccc
Q 021659          123 LNDPLKTPLDWKTRLQIAIGVAAALEYLLLFS--NLPMYYVSISSSSIMLDENFTAKLSDVGFFN  185 (309)
Q Consensus       123 i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h--~~~i~H~dl~p~nill~~~~~~kl~dfg~~~  185 (309)
                        .     .   ....++.+++.+|..||...  ..+++|||++|.||+++ ++.++++||+.+.
T Consensus        82 --~-----~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~  135 (170)
T cd05151          82 --D-----F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG  135 (170)
T ss_pred             --c-----c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence              1     1   11335678999999995332  23369999999999998 6689999999764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.42  E-value=1.1e-12  Score=121.44  Aligned_cols=138  Identities=17%  Similarity=0.151  Sum_probs=94.7

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccccH-----------------------------------------HHHHH
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEK-----------------------------------------DAFYR   82 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~-----------------------------------------~~~~~   82 (309)
                      +.||.|++|.||+|+..+|+.||+|+....-...                                         -.|.+
T Consensus       123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~  202 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR  202 (437)
T ss_pred             cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence            3699999999999999999999999974321000                                         01344


Q ss_pred             HHHHHccC----CCCCcceEeeeEe--CCeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHH-HhhhhhcCC
Q 021659           83 EIQLLGRL----HHRHLLALQGFST--GRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAA-LEYLLLFSN  155 (309)
Q Consensus        83 ei~~l~~l----~h~niv~~~~~~~--~~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~-l~~lh~~h~  155 (309)
                      |+..+.++    ++.+-+.+-..+.  ....++||||++|++|.+..... ....+   ...++..++.+ +..+   |.
T Consensus       203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~-~~~~~---~~~ia~~~~~~~l~ql---~~  275 (437)
T TIGR01982       203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALD-EAGLD---RKALAENLARSFLNQV---LR  275 (437)
T ss_pred             HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHH-hcCCC---HHHHHHHHHHHHHHHH---Hh
Confidence            55555544    2333333333332  24578999999999998876421 11122   34455555553 4566   77


Q ss_pred             CCeeecccCCCceeeCCCCceeEeccccccccc
Q 021659          156 LPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR  188 (309)
Q Consensus       156 ~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~  188 (309)
                      .|++|+|++|.||+++.++.++++|||++....
T Consensus       276 ~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       276 DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS  308 (437)
T ss_pred             CCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence            899999999999999999999999999986554

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.41  E-value=3.2e-13  Score=115.79  Aligned_cols=191  Identities=18%  Similarity=0.233  Sum_probs=130.8

Q ss_pred             HHHccCCCCCcceEeeeEeC------CeeEEEEeeCCCCCHHHhhcCC--CCCCCCHHHHHHHHHHHHHHHhhhhhcCCC
Q 021659           85 QLLGRLHHRHLLALQGFSTG------RKRLLVFDNIENGSLKEHLNDP--LKTPLDWKTRLQIAIGVAAALEYLLLFSNL  156 (309)
Q Consensus        85 ~~l~~l~h~niv~~~~~~~~------~~~~lv~e~~~~~sL~~~i~~~--~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~  156 (309)
                      ..|-++-|.||+++..|+++      ....+++||+..|++.+.++..  ....+....-.+++.||++||.|||+ ...
T Consensus       119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~P  197 (458)
T KOG1266|consen  119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CDP  197 (458)
T ss_pred             HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cCC
Confidence            44556679999999987764      2346889999999999999752  34667777888999999999999987 478


Q ss_pred             CeeecccCCCceeeCCCCceeEecccccccc-----------cccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHh
Q 021659          157 PMYYVSISSSSIMLDENFTAKLSDVGFFNSV-----------RNYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVT  223 (309)
Q Consensus       157 ~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-----------~~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~t  223 (309)
                      .++|+++..+.|++..+|-+|++--......           +-..+.++|.+||....  .+.++|||+||....+|..
T Consensus       198 piihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai  277 (458)
T KOG1266|consen  198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI  277 (458)
T ss_pred             ccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence            8999999999999999988887633221100           11234578889986433  3578999999999999988


Q ss_pred             CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          224 GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       224 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      +..--.......  ..+......+..+-++.         -+   .++..|++..|..||+|.+++.
T Consensus       278 lEiq~tnseS~~--~~ee~ia~~i~~len~l---------qr---~~i~kcl~~eP~~rp~ar~llf  330 (458)
T KOG1266|consen  278 LEIQSTNSESKV--EVEENIANVIIGLENGL---------QR---GSITKCLEGEPNGRPDARLLLF  330 (458)
T ss_pred             heeccCCCccee--ehhhhhhhheeeccCcc---------cc---CcCcccccCCCCCCcchhhhhc
Confidence            776533221110  00000000000000110         01   3455999999999999998764

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.38  E-value=4.6e-12  Score=118.09  Aligned_cols=160  Identities=21%  Similarity=0.223  Sum_probs=121.8

Q ss_pred             EcCCcEEEEEEecccccc-HHHHHHHHHHHccCCCCCcceEeeeE-eCCeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHH
Q 021659           59 FQDGEVALVKEIQALNLE-KDAFYREIQLLGRLHHRHLLALQGFS-TGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTR  136 (309)
Q Consensus        59 ~~~~~~va~K~~~~~~~~-~~~~~~ei~~l~~l~h~niv~~~~~~-~~~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~  136 (309)
                      ..++..|.+........+ .+...+.+..|+.|+||||++++... .++..|+|+|-+  .+|..+++.     ++...+
T Consensus        34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~-----l~~~~v  106 (690)
T KOG1243|consen   34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKE-----LGKEEV  106 (690)
T ss_pred             eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHH-----hHHHHH
Confidence            456778888877554432 24467788999999999999999955 457889999988  688888876     335556


Q ss_pred             HHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccccCCC-------CCCCCCCCCCCCCCCC
Q 021659          137 LQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYATM-------PHSSCPEDCSTQDCSN  209 (309)
Q Consensus       137 ~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~~~~-------~~~~~PE~~~~~~~~~  209 (309)
                      .--+.||+.||.|||  +..+++|+++.-+.|+++..|.-||++|..+.........       -.|..|+.....+-+.
T Consensus       107 ~~Gl~qIl~AL~FL~--~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~~s~  184 (690)
T KOG1243|consen  107 CLGLFQILAALSFLN--DDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSEWSI  184 (690)
T ss_pred             HHHHHHHHHHHHHHh--ccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccccch
Confidence            666899999999997  6889999999999999999999999999887544433211       1234454433333456


Q ss_pred             cEeehhhHHHHHHhCCCC
Q 021659          210 IIFQLGVLILELVTGQSP  227 (309)
Q Consensus       210 Dv~slG~~l~~l~tg~~p  227 (309)
                      |.|.|||++++++.|..+
T Consensus       185 D~~~Lg~li~el~ng~~~  202 (690)
T KOG1243|consen  185 DSWGLGCLIEELFNGSLL  202 (690)
T ss_pred             hhhhHHHHHHHHhCcccC
Confidence            999999999999999443

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.28  E-value=1.1e-11  Score=116.63  Aligned_cols=133  Identities=14%  Similarity=0.124  Sum_probs=88.2

Q ss_pred             ccccCCCceEEEEEEcC-CcEEEEEEeccccc---------------------------c--------HH------HHHH
Q 021659           45 IVYTNSHGAAYKARFQD-GEVALVKEIQALNL---------------------------E--------KD------AFYR   82 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~~-~~~va~K~~~~~~~---------------------------~--------~~------~~~~   82 (309)
                      -+|.|++|.||+|+..+ |+.||+|+....-.                           .        .+      ++.+
T Consensus       126 PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~  205 (537)
T PRK04750        126 PLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLMR  205 (537)
T ss_pred             hhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHHH
Confidence            69999999999999877 99999999853210                           0        00      1344


Q ss_pred             HHHHHccCC----CCCcceEeeeEeC--CeeEEEEeeCCCCCHHHhh--cCCC--CCCCCHHHHHHHHHHHHHHHhhhhh
Q 021659           83 EIQLLGRLH----HRHLLALQGFSTG--RKRLLVFDNIENGSLKEHL--NDPL--KTPLDWKTRLQIAIGVAAALEYLLL  152 (309)
Q Consensus        83 ei~~l~~l~----h~niv~~~~~~~~--~~~~lv~e~~~~~sL~~~i--~~~~--~~~l~~~~~~~i~~~i~~~l~~lh~  152 (309)
                      |+..+.+++    +.+.+.+-..+.+  ...++||||++|+++.+.-  ...+  ...+....+..++.|+         
T Consensus       206 Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi---------  276 (537)
T PRK04750        206 EAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV---------  276 (537)
T ss_pred             HHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH---------
Confidence            555555552    4444444343332  5678999999999998742  2210  0112222233333333         


Q ss_pred             cCCCCeeecccCCCceeeCCCC----ceeEecccccccc
Q 021659          153 FSNLPMYYVSISSSSIMLDENF----TAKLSDVGFFNSV  187 (309)
Q Consensus       153 ~h~~~i~H~dl~p~nill~~~~----~~kl~dfg~~~~~  187 (309)
                       ...|++|+|++|.||+++.++    .++++|||++...
T Consensus       277 -f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l  314 (537)
T PRK04750        277 -FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL  314 (537)
T ss_pred             -HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence             457899999999999999887    9999999997644

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.27  E-value=9.5e-12  Score=114.67  Aligned_cols=237  Identities=15%  Similarity=0.126  Sum_probs=164.7

Q ss_pred             Hhhccccccccc--CCCceEEEEEE---cCCcEEEEEEecc---ccccHHHHHHHHHHHccCC-CCCcceEeeeEeC-Ce
Q 021659           37 MATDGFHRIVYT--NSHGAAYKARF---QDGEVALVKEIQA---LNLEKDAFYREIQLLGRLH-HRHLLALQGFSTG-RK  106 (309)
Q Consensus        37 ~~~~~~~~~lg~--G~~~~v~~~~~---~~~~~va~K~~~~---~~~~~~~~~~ei~~l~~l~-h~niv~~~~~~~~-~~  106 (309)
                      ...-++...+|.  |.+|.+|.+..   .++..+|+|.-..   ......+-.+|+....+++ |+|.++....+.. +.
T Consensus       113 ~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~  192 (524)
T KOG0601|consen  113 DQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGI  192 (524)
T ss_pred             hhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCc
Confidence            333445567999  99999999987   4577888887421   1223344567777777884 9999997776554 55


Q ss_pred             eEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHH----HHhhhhhcCCCCeeecccCCCceeeCCC-CceeEecc
Q 021659          107 RLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAA----ALEYLLLFSNLPMYYVSISSSSIMLDEN-FTAKLSDV  181 (309)
Q Consensus       107 ~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~----~l~~lh~~h~~~i~H~dl~p~nill~~~-~~~kl~df  181 (309)
                      .++-+|.+. .+|.++.... ..-++....+....+...    |+..+   |...++|-|++|.||++..+ ...+++||
T Consensus       193 lfiqtE~~~-~sl~~~~~~~-~~~~p~~~l~~~~~~~~~~~~~al~~~---hs~~~~~~~~kp~~i~~~~~~~s~~~~df  267 (524)
T KOG0601|consen  193 LFIQTELCG-ESLQSYCHTP-CNFLPDNLLWNSLRDWLSRDVTALSHL---HSNNIVHDDLKPANIFTTSDWTSCKLTDF  267 (524)
T ss_pred             ceeeecccc-chhHHhhhcc-cccCCchhhhhHHhhhhhccccccccc---CCCcccccccchhheecccccceeecCCc
Confidence            566667665 5888888653 233666777888888888    99999   88899999999999999999 88999999


Q ss_pred             ccccccccc------------CCCCCCCCCCCCCC-CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccccc
Q 021659          182 GFFNSVRNY------------ATMPHSSCPEDCST-QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIH  248 (309)
Q Consensus       182 g~~~~~~~~------------~~~~~~~~PE~~~~-~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~  248 (309)
                      |+...++..            .+...|++||...+ .+..+|+|++|.++.+..++..+...+... .|.       ...
T Consensus       268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~-~W~-------~~r  339 (524)
T KOG0601|consen  268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNS-SWS-------QLR  339 (524)
T ss_pred             ceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCC-Ccc-------ccc
Confidence            987654322            45567899997555 588999999999999999988776544110 011       001


Q ss_pred             ccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHH
Q 021659          249 RMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQIS  289 (309)
Q Consensus       249 ~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl  289 (309)
                      .+.   +..++-..-...+...+.++++.+|..|++.+.+.
T Consensus       340 ~~~---ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~  377 (524)
T KOG0601|consen  340 QGY---IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILT  377 (524)
T ss_pred             ccc---CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHh
Confidence            100   11111111123344477799999999999887765

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.27  E-value=8.2e-11  Score=96.71  Aligned_cols=136  Identities=13%  Similarity=0.106  Sum_probs=97.3

Q ss_pred             cccccCCCceEEEEEEcC-------CcEEEEEEeccccc----------------------c-HHHH----HHHHHHHcc
Q 021659           44 RIVYTNSHGAAYKARFQD-------GEVALVKEIQALNL----------------------E-KDAF----YREIQLLGR   89 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~-------~~~va~K~~~~~~~----------------------~-~~~~----~~ei~~l~~   89 (309)
                      ..||+|.=+.||.|...+       +..+|+|+...+..                      + .+.+    .+|+..|++
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            358899999999998543       47899998742110                      1 1122    379999998


Q ss_pred             CC--CCCcceEeeeEeCCeeEEEEeeCCCCCHH-HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCC
Q 021659           90 LH--HRHLLALQGFSTGRKRLLVFDNIENGSLK-EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSS  166 (309)
Q Consensus        90 l~--h~niv~~~~~~~~~~~~lv~e~~~~~sL~-~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~  166 (309)
                      +.  .-++..++++   ...++||||+.+..+. ..+.+   ..++......+..+++.++..|+  |..+++||||++.
T Consensus        83 l~~~Gv~vP~pi~~---~~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~--H~~glVHGDLs~~  154 (197)
T cd05146          83 MQKAGIPCPEVVVL---KKHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLY--KECNLVHADLSEY  154 (197)
T ss_pred             HHHcCCCCCeEEEe---cCCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHH--HhCCeecCCCCHH
Confidence            85  3466666765   4568899999764332 22322   34555667778899999999885  7789999999999


Q ss_pred             ceeeCCCCceeEeccccccccc
Q 021659          167 SIMLDENFTAKLSDVGFFNSVR  188 (309)
Q Consensus       167 nill~~~~~~kl~dfg~~~~~~  188 (309)
                      ||+++ ++.+.++|||.+....
T Consensus       155 NIL~~-~~~v~iIDF~qav~~~  175 (197)
T cd05146         155 NMLWH-DGKVWFIDVSQSVEPT  175 (197)
T ss_pred             HEEEE-CCcEEEEECCCceeCC
Confidence            99996 4689999999875443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.17  E-value=3.4e-10  Score=95.32  Aligned_cols=139  Identities=14%  Similarity=0.135  Sum_probs=104.4

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccc--cHHHHHHHHHHHccCCC--CCcceEeeeEeC----CeeEEEEeeCC
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNL--EKDAFYREIQLLGRLHH--RHLLALQGFSTG----RKRLLVFDNIE  115 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h--~niv~~~~~~~~----~~~~lv~e~~~  115 (309)
                      +.++.|..+.+|++...+|+.+++|.......  ....+..|+++++.+++  .++.+++.+...    +..++||||++
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~   83 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD   83 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence            35789999999999987667889998754332  34568899999999965  345677776654    25689999999


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhc------------------------------------------
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLF------------------------------------------  153 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~------------------------------------------  153 (309)
                      |.++.+.+..   ..++......++.+++++|..||..                                          
T Consensus        84 G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (223)
T cd05154          84 GRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL  160 (223)
T ss_pred             CEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence            9888775531   3466666777777787777777642                                          


Q ss_pred             -----------CCCCeeecccCCCceeeCC--CCceeEecccccc
Q 021659          154 -----------SNLPMYYVSISSSSIMLDE--NFTAKLSDVGFFN  185 (309)
Q Consensus       154 -----------h~~~i~H~dl~p~nill~~--~~~~kl~dfg~~~  185 (309)
                                 ....++|||++|.||+++.  ++.+.++||+.+.
T Consensus       161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~  205 (223)
T cd05154         161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT  205 (223)
T ss_pred             HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence                       1356799999999999988  5668899998764

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.15  E-value=5.2e-10  Score=89.45  Aligned_cols=127  Identities=20%  Similarity=0.254  Sum_probs=90.7

Q ss_pred             ccccCCCceEEEEEEcCCcEEEEEEe-ccc----ccc----HHHHHHHHHHHccCCCCCc--ceEeeeEeCCeeEEEEee
Q 021659           45 IVYTNSHGAAYKARFQDGEVALVKEI-QAL----NLE----KDAFYREIQLLGRLHHRHL--LALQGFSTGRKRLLVFDN  113 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~~~~~va~K~~-~~~----~~~----~~~~~~ei~~l~~l~h~ni--v~~~~~~~~~~~~lv~e~  113 (309)
                      .+.+|+=+.++.+.+.+. .+++|.- ++.    ..+    ..+-.+|+.++.+++--.+  ..+++ ++...-.++|||
T Consensus         3 ~i~~GAEa~i~~~~~~g~-~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~d-vD~~~~~I~me~   80 (204)
T COG3642           3 LIKQGAEAIIYLTDFLGL-PAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYD-VDPDNGLIVMEY   80 (204)
T ss_pred             hhhCCcceeEEeeeccCc-ceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEE-EcCCCCEEEEEE
Confidence            578899999999977433 3555543 221    111    2345678999888853333  33333 333556789999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccc
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNS  186 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~  186 (309)
                      ++|..|.+.+...         ...++..+-.-+.-|   |..||+||||.++|+++++.+ +.++|||++..
T Consensus        81 I~G~~lkd~l~~~---------~~~~~r~vG~~vg~l---H~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642          81 IEGELLKDALEEA---------RPDLLREVGRLVGKL---HKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             eCChhHHHHHHhc---------chHHHHHHHHHHHHH---HhcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence            9999999998762         255677777778889   899999999999999997664 89999999763

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.12  E-value=4.4e-10  Score=89.56  Aligned_cols=139  Identities=16%  Similarity=0.218  Sum_probs=97.9

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEe-cc----c----cccHHHHHHHHHHHccCCCCCcce-EeeeEeCCeeEEEEee
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEI-QA----L----NLEKDAFYREIQLLGRLHHRHLLA-LQGFSTGRKRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~-~~----~----~~~~~~~~~ei~~l~~l~h~niv~-~~~~~~~~~~~lv~e~  113 (309)
                      ..+.||+=+.|+++.+. |+.+++|.- .+    .    ....++-..|+..|.++.--.|.. -+-|++.....++|||
T Consensus        13 ~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~   91 (229)
T KOG3087|consen   13 ELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEF   91 (229)
T ss_pred             eeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEe
Confidence            57889999999999884 666555543 21    1    222456678999998886433332 2234555667789999


Q ss_pred             CCC-CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCc---eeEeccccccc
Q 021659          114 IEN-GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFT---AKLSDVGFFNS  186 (309)
Q Consensus       114 ~~~-~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~---~kl~dfg~~~~  186 (309)
                      +++ .++.+++..-....-.......++..+-..+.-|   |..+++||||..+||++..++.   +.++|||++..
T Consensus        92 ~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igkl---H~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen   92 IDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKL---HDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             ccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHh---hhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence            987 5778877542222222333367889999999999   8999999999999999976543   57999998653

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.08  E-value=8e-10  Score=90.46  Aligned_cols=125  Identities=17%  Similarity=0.169  Sum_probs=82.1

Q ss_pred             eEEEEEEcCCcEEEEEEecccccc---------------------------HHHHHHHHHHHccCCCC--CcceEeeeEe
Q 021659           53 AAYKARFQDGEVALVKEIQALNLE---------------------------KDAFYREIQLLGRLHHR--HLLALQGFST  103 (309)
Q Consensus        53 ~v~~~~~~~~~~va~K~~~~~~~~---------------------------~~~~~~ei~~l~~l~h~--niv~~~~~~~  103 (309)
                      .||.|...++..+|+|.-.....+                           .....+|.+.|.++..-  ++..++++. 
T Consensus         1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~-   79 (188)
T PF01163_consen    1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN-   79 (188)
T ss_dssp             EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred             CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence            389999888999999987421100                           12346899999999744  566676554 


Q ss_pred             CCeeEEEEeeCC--CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecc
Q 021659          104 GRKRLLVFDNIE--NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDV  181 (309)
Q Consensus       104 ~~~~~lv~e~~~--~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~df  181 (309)
                        ...+||||++  |.++..+...    .++......++.+++..+..++  |..|++||||++.||+++.+ .+.++||
T Consensus        80 --~~~ivME~I~~~G~~~~~l~~~----~~~~~~~~~~~~~il~~~~~~~--~~~givHGDLs~~NIlv~~~-~~~iIDf  150 (188)
T PF01163_consen   80 --RNVIVMEYIGEDGVPLPRLKDV----DLSPEEPKELLEEILEEIIKML--HKAGIVHGDLSEYNILVDDG-KVYIIDF  150 (188)
T ss_dssp             --TTEEEEE--EETTEEGGCHHHC----GGGGSTHHHHHHHHHHHHHHHH--HCTTEEESS-STTSEEEETT-CEEE--G
T ss_pred             --CCEEEEEecCCCccchhhHHhc----cccchhHHHHHHHHHHHHHHHH--HhcCceecCCChhhEEeecc-eEEEEec
Confidence              3479999998  6555544332    1213345667778888666543  78899999999999999877 9999999


Q ss_pred             cccccc
Q 021659          182 GFFNSV  187 (309)
Q Consensus       182 g~~~~~  187 (309)
                      |.+...
T Consensus       151 ~qav~~  156 (188)
T PF01163_consen  151 GQAVDS  156 (188)
T ss_dssp             TTEEET
T ss_pred             Ccceec
Confidence            987543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=99.00  E-value=9.6e-09  Score=89.00  Aligned_cols=137  Identities=13%  Similarity=0.124  Sum_probs=95.7

Q ss_pred             ccccCCCceEEEEEEcCCcEEEEEEeccccc------------cHHHHHHHHHHHccCCCC--CcceEeeeEe------C
Q 021659           45 IVYTNSHGAAYKARFQDGEVALVKEIQALNL------------EKDAFYREIQLLGRLHHR--HLLALQGFST------G  104 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~------------~~~~~~~ei~~l~~l~h~--niv~~~~~~~------~  104 (309)
                      .+.......|.+..+ +|+.+.+|.......            ....+.+|...+.+|...  ..+.++++..      .
T Consensus        29 ~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~  107 (268)
T PRK15123         29 VFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPAT  107 (268)
T ss_pred             EEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCcc
Confidence            344334445667766 566788886532110            011477888888888432  2334444432      1


Q ss_pred             CeeEEEEeeCCCC-CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC-------CCce
Q 021659          105 RKRLLVFDNIENG-SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE-------NFTA  176 (309)
Q Consensus       105 ~~~~lv~e~~~~~-sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~-------~~~~  176 (309)
                      ...++|+|++++. +|.+++........+...+..++.+++..+.-|   |..|++|||+++.|||++.       +..+
T Consensus       108 ~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~L---H~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~  184 (268)
T PRK15123        108 RTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDM---HAAGINHRDCYICHFLLHLPFPGREEDLKL  184 (268)
T ss_pred             ceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHH---HHCcCccCCCChhhEEEeccccCCCCCceE
Confidence            3467999999886 899998643234556677788999999999999   8899999999999999975       4678


Q ss_pred             eEecccccc
Q 021659          177 KLSDVGFFN  185 (309)
Q Consensus       177 kl~dfg~~~  185 (309)
                      .++||+.+.
T Consensus       185 ~LIDl~r~~  193 (268)
T PRK15123        185 SVIDLHRAQ  193 (268)
T ss_pred             EEEECCccc
Confidence            999999764

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.96  E-value=2.5e-08  Score=91.00  Aligned_cols=167  Identities=17%  Similarity=0.208  Sum_probs=126.1

Q ss_pred             CCceEEEEEE-cCCcEEEEEEecccc-ccHHHHHHHHHHHccCCCCCcceEeeeE-----eCCeeEEEEeeCCC-CCHHH
Q 021659           50 SHGAAYKARF-QDGEVALVKEIQALN-LEKDAFYREIQLLGRLHHRHLLALQGFS-----TGRKRLLVFDNIEN-GSLKE  121 (309)
Q Consensus        50 ~~~~v~~~~~-~~~~~va~K~~~~~~-~~~~~~~~ei~~l~~l~h~niv~~~~~~-----~~~~~~lv~e~~~~-~sL~~  121 (309)
                      ...+.|++.. .||..|++|+++... .....-..-++.++++.|+|+|++.+++     .+...++|++|.++ ++|.+
T Consensus       288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d  367 (655)
T KOG3741|consen  288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD  367 (655)
T ss_pred             ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence            3467788874 678899999983222 2223445668899999999999998843     24677899999975 58887


Q ss_pred             hhcCC-------------CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc
Q 021659          122 HLNDP-------------LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR  188 (309)
Q Consensus       122 ~i~~~-------------~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~  188 (309)
                      +-...             .+...++...|.++.|+..||.++   |+.|...+-|.|.+|+++++-+++|...|+.....
T Consensus       368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sI---HssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~  444 (655)
T KOG3741|consen  368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSI---HSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQ  444 (655)
T ss_pred             HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHH---HhcCceeecccHhHeEeeCcceEEEecccceeeec
Confidence            66431             234567889999999999999999   88899999999999999999999999888876554


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCcEeehhhHHHHHHhCCCC
Q 021659          189 NYATMPHSSCPEDCSTQDCSNIIFQLGVLILELVTGQSP  227 (309)
Q Consensus       189 ~~~~~~~~~~PE~~~~~~~~~Dv~slG~~l~~l~tg~~p  227 (309)
                      ...++     |   .....+-|.=.||.+++.|.||..-
T Consensus       445 ~d~~~-----~---le~~Qq~D~~~lG~ll~aLAt~~~n  475 (655)
T KOG3741|consen  445 EDPTE-----P---LESQQQNDLRDLGLLLLALATGTEN  475 (655)
T ss_pred             CCCCc-----c---hhHHhhhhHHHHHHHHHHHhhcccc
Confidence            33211     1   0113457888999999999999653

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.89  E-value=2.7e-09  Score=98.70  Aligned_cols=230  Identities=19%  Similarity=0.202  Sum_probs=154.7

Q ss_pred             cccccCCCceEEEEEE--cCCcEEEEEEecccccc-HH--HHHHHHHHHccC-CCCCcceEee-eEeCCeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARF--QDGEVALVKEIQALNLE-KD--AFYREIQLLGRL-HHRHLLALQG-FSTGRKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~--~~~~~va~K~~~~~~~~-~~--~~~~ei~~l~~l-~h~niv~~~~-~~~~~~~~lv~e~~~~  116 (309)
                      ..||.|.|+.|+....  .++..|++|.+.+.... ..  .-..|+-+...+ .|.+++.++. |....+.|+=.||+++
T Consensus       271 ~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~  350 (524)
T KOG0601|consen  271 SKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEG  350 (524)
T ss_pred             EEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhcC
Confidence            5799999999998875  35677888877443322 12  224566555566 4778887766 5555677777899999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC-CceeEeccccccccccc----C
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN-FTAKLSDVGFFNSVRNY----A  191 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~-~~~kl~dfg~~~~~~~~----~  191 (309)
                      +++...+..  ...+.+..++++..+++.++.++   |+..++|+|++|+||++..+ +..++.|||+...+...    .
T Consensus       351 ~s~~l~~~~--~~~~d~~~~~~~~~q~~~~l~~i---~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~~~~  425 (524)
T KOG0601|consen  351 GSSSLRSVT--SQMLDEDPRLRLTAQILTALNVI---HSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSGVFH  425 (524)
T ss_pred             cchhhhhHH--HHhcCcchhhhhHHHHHhccccc---cchhhhcccccccceeeccchhhhhccccccccccceeccccc
Confidence            988877643  56788888999999999999999   89999999999999999876 78899999987532211    1


Q ss_pred             CCCCCC--CCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          192 TMPHSS--CPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       192 ~~~~~~--~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ....+.  ++.....  ...+.|++|||....+..++...-......   .       .+..-..+.....     ...+
T Consensus       426 ~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~---~-------~i~~~~~p~~~~~-----~~~~  490 (524)
T KOG0601|consen  426 HIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQS---L-------TIRSGDTPNLPGL-----KLQL  490 (524)
T ss_pred             ccccccccchhhccccccccccccccccccccccccCcccCcccccc---e-------eeecccccCCCch-----HHhh
Confidence            222222  3332222  357899999999999999988754332111   0       0000011111111     1334


Q ss_pred             HHHHHHccCCCCCCCCChHHHHHHHh
Q 021659          268 LAVARLCIKTKDKPTISIPQISRYLQ  293 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~evl~~L~  293 (309)
                      ..++..+..++++.||.+.++....+
T Consensus       491 q~~~kv~~~~~~~~~~l~~~l~~~~~  516 (524)
T KOG0601|consen  491 QVLLKVMINPDRKRRPSAVELSLHSE  516 (524)
T ss_pred             hhhhhhhcCCccccchhhhhhcccch
Confidence            44444888999999999888765544

>PRK09902 hypothetical protein; Provisional

Probab=98.79  E-value=1e-07  Score=78.80  Aligned_cols=135  Identities=14%  Similarity=0.115  Sum_probs=100.4

Q ss_pred             cccCCCceEEEEEEcCCcEEEEEEeccc-------cccHHHHHHHHHHHccCCC--CCcceEeeeEe---C---CeeEEE
Q 021659           46 VYTNSHGAAYKARFQDGEVALVKEIQAL-------NLEKDAFYREIQLLGRLHH--RHLLALQGFST---G---RKRLLV  110 (309)
Q Consensus        46 lg~G~~~~v~~~~~~~~~~va~K~~~~~-------~~~~~~~~~ei~~l~~l~h--~niv~~~~~~~---~---~~~~lv  110 (309)
                      -|.|+.+.|++....+. .+-+|.-.+.       +.+...|.+|+..|++|..  -++..+. |+.   .   ...++|
T Consensus        26 ~~rgG~SgV~r~~~~g~-~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV  103 (216)
T PRK09902         26 YRRNGMSGVQCVERNGK-KLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV  103 (216)
T ss_pred             cCCCCcceEEEEEeCCc-EEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence            56688899999887544 5667765311       3356779999999999953  2244444 322   1   235699


Q ss_pred             EeeCCC-CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCc--eeEecccccc
Q 021659          111 FDNIEN-GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFT--AKLSDVGFFN  185 (309)
Q Consensus       111 ~e~~~~-~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~--~kl~dfg~~~  185 (309)
                      +|-+++ .||.+++.+..-.+.+...+..++.++++.+.-|   |..|+.|+|+.+.||+++.++.  ++++||.-++
T Consensus       104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~L---H~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r  178 (216)
T PRK09902        104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKM---HSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR  178 (216)
T ss_pred             EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHH---HHCCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence            998864 4999988764445567777889999999999999   8899999999999999986666  8999997543

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.78  E-value=3e-07  Score=82.28  Aligned_cols=243  Identities=14%  Similarity=0.101  Sum_probs=146.1

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccc-cccHHHHHHHHHHHccC-CCCCcce--------EeeeEeCCeeEEEEee
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQAL-NLEKDAFYREIQLLGRL-HHRHLLA--------LQGFSTGRKRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~-~~~~~~~~~ei~~l~~l-~h~niv~--------~~~~~~~~~~~lv~e~  113 (309)
                      +-||+|+-+.+|..-- -+..| .|+.... ..-+.+.   ++.|... .||-+..        ++|--......++|..
T Consensus        17 r~LgqGgea~ly~l~e-~~d~V-AKIYh~Pppa~~aqk---~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflmP~   91 (637)
T COG4248          17 RPLGQGGEADLYTLGE-VRDQV-AKIYHAPPPAAQAQK---VAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLMPK   91 (637)
T ss_pred             ccccCCccceeeecch-hhchh-heeecCCCchHHHHH---HHHhccCCCCcchhhhhcccHHHhhCCCccceeEEeccc
Confidence            6799999999996542 12233 3444322 2111111   2223333 4543322        1111111224477777


Q ss_pred             CCCC-CHHHhhcC----CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccc---
Q 021659          114 IENG-SLKEHLND----PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFN---  185 (309)
Q Consensus       114 ~~~~-sL~~~i~~----~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~---  185 (309)
                      +.+. .+.++.+.    .+..-+.|.-.++.+..++.+.+.|   |..|.+-||+++.|+|+++++.|.+.|-....   
T Consensus        92 v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~l---H~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~  168 (637)
T COG4248          92 VSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATL---HEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINA  168 (637)
T ss_pred             CCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHH---HhcCCcccccCccceeeecCceEEEEcccceeecc
Confidence            7653 44444432    2345688999999999999999999   78899999999999999999999998754322   


Q ss_pred             ---cccccCCCCCCCCCCCCC-------CCCCCCcEeehhhHHHHHHhC-CCCCCCCccH-----------HHHHHHhcc
Q 021659          186 ---SVRNYATMPHSSCPEDCS-------TQDCSNIIFQLGVLILELVTG-QSPEEGDVDL-----------IQWIQESSI  243 (309)
Q Consensus       186 ---~~~~~~~~~~~~~PE~~~-------~~~~~~Dv~slG~~l~~l~tg-~~p~~~~~~~-----------~~~~~~~~~  243 (309)
                         ......+.+.|.+||...       +.+..+|.|.||+++++++.| ..||.+-...           ......+..
T Consensus       169 ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~  248 (637)
T COG4248         169 NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYAS  248 (637)
T ss_pred             CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeech
Confidence               233457788999999643       236789999999999999986 8998753211           000000000


Q ss_pred             cccccccccCcC--CCCCCHHHHHHHHHHHHHccCCC--CCCCCChHHHHHHHhhhhcc
Q 021659          244 SSSIHRMIDPDL--GGSYDSKELKKLLAVARLCIKTK--DKPTISIPQISRYLQNEVDI  298 (309)
Q Consensus       244 ~~~~~~~~~~~l--~~~~~~~~~~~l~~l~~~cl~~d--p~~Rps~~evl~~L~~~~~~  298 (309)
                      .. ......+..  +-+.-+..+..|..   +|+...  +..|||+...+.+|..+.+.
T Consensus       249 ~~-~~g~~p~P~~~P~~~Lpp~vqAlF~---qaF~~~~~~~~RP~a~aW~aAl~al~~~  303 (637)
T COG4248         249 DQ-RRGLKPPPRSIPLSMLPPDVQALFQ---QAFTESGVATPRPTAKAWVAALDALRQQ  303 (637)
T ss_pred             hc-cCCCCCCCCCCChhhcCHHHHHHHH---HHhcccCCCCCCCCHHHHHHHHHHHHHh
Confidence            00 001111110  11111233455555   887764  56899999999988776654

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.77  E-value=5.2e-08  Score=82.64  Aligned_cols=129  Identities=17%  Similarity=0.071  Sum_probs=93.0

Q ss_pred             ccccccCCCceEEEEEEcCCcEEEEEEeccccc-----------------------cHHHHHHHHHHHccCCCC--Ccce
Q 021659           43 HRIVYTNSHGAAYKARFQDGEVALVKEIQALNL-----------------------EKDAFYREIQLLGRLHHR--HLLA   97 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~-----------------------~~~~~~~ei~~l~~l~h~--niv~   97 (309)
                      ...||.|.=+.||.|..++|..+|+|.=.....                       ......+|.+.|++|...  .+..
T Consensus        96 G~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~VP~  175 (304)
T COG0478          96 GTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKVPK  175 (304)
T ss_pred             ccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCCCC
Confidence            368999999999999999999999995321110                       012346899999998644  6666


Q ss_pred             EeeeEeCCeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCcee
Q 021659           98 LQGFSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAK  177 (309)
Q Consensus        98 ~~~~~~~~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~k  177 (309)
                      .+++.   ...+|||+++|..|...-       ++......++..++.-+..+   -..|++|||+++-||+++.+|.+.
T Consensus       176 P~~~n---RHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~---~~~GiVHGDlSefNIlV~~dg~~~  242 (304)
T COG0478         176 PIAWN---RHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKA---YRRGIVHGDLSEFNILVTEDGDIV  242 (304)
T ss_pred             ccccc---cceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHH---HHcCccccCCchheEEEecCCCEE
Confidence            66543   346899999996665532       12233444555555555555   456899999999999999999999


Q ss_pred             Eeccccc
Q 021659          178 LSDVGFF  184 (309)
Q Consensus       178 l~dfg~~  184 (309)
                      ++||-.+
T Consensus       243 vIDwPQ~  249 (304)
T COG0478         243 VIDWPQA  249 (304)
T ss_pred             EEeCccc
Confidence            9999654

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.65  E-value=1.7e-07  Score=78.38  Aligned_cols=105  Identities=18%  Similarity=0.208  Sum_probs=81.2

Q ss_pred             HHHHHHHHHHHccCCC--CCcceEeeeEeC-----CeeEEEEeeCCC-CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHh
Q 021659           77 KDAFYREIQLLGRLHH--RHLLALQGFSTG-----RKRLLVFDNIEN-GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALE  148 (309)
Q Consensus        77 ~~~~~~ei~~l~~l~h--~niv~~~~~~~~-----~~~~lv~e~~~~-~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~  148 (309)
                      .....+|...+..|..  =.....+++...     ...++|+|++++ .+|.+++...  ...+......++.+++..+.
T Consensus        55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~--~~~~~~~~~~ll~~l~~~i~  132 (206)
T PF06293_consen   55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQW--EQLDPSQRRELLRALARLIA  132 (206)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhh--cccchhhHHHHHHHHHHHHH
Confidence            4467788888887742  234455555432     245799999987 4899998762  23666778889999999999


Q ss_pred             hhhhcCCCCeeecccCCCceeeCCCC---ceeEeccccccc
Q 021659          149 YLLLFSNLPMYYVSISSSSIMLDENF---TAKLSDVGFFNS  186 (309)
Q Consensus       149 ~lh~~h~~~i~H~dl~p~nill~~~~---~~kl~dfg~~~~  186 (309)
                      -|   |..|++|+|+++.|||++.++   .+.++||+-+..
T Consensus       133 ~l---H~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  133 KL---HDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF  170 (206)
T ss_pred             HH---HHCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence            99   889999999999999999887   799999997653

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.55  E-value=6.5e-08  Score=91.13  Aligned_cols=139  Identities=17%  Similarity=0.171  Sum_probs=90.6

Q ss_pred             HHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc----------------cCCCCCCCCCCCCCC
Q 021659          141 IGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN----------------YATMPHSSCPEDCST  204 (309)
Q Consensus       141 ~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~----------------~~~~~~~~~PE~~~~  204 (309)
                      .+++.|+.|+|  .+.+++|++|.|++|.+++.+..|++.|+.+.....                ......|.+||....
T Consensus       106 ~~v~dgl~flh--~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~  183 (700)
T KOG2137|consen  106 GNVADGLAFLH--RSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG  183 (700)
T ss_pred             hcccchhhhhc--cCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence            34448999997  467899999999999999999999999987642221                123356889997544


Q ss_pred             --CCCCCcEeehhhHHHHHH-hCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCC
Q 021659          205 --QDCSNIIFQLGVLILELV-TGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKP  281 (309)
Q Consensus       205 --~~~~~Dv~slG~~l~~l~-tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~  281 (309)
                        .++++|+||+|+++|.+. .|+..+................+..        ....+.+-..++.+-+.+++..++.-
T Consensus       184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~--------~~~~s~~~p~el~~~l~k~l~~~~~~  255 (700)
T KOG2137|consen  184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAG--------AFGYSNNLPSELRESLKKLLNGDSAV  255 (700)
T ss_pred             ccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccc--------cccccccCcHHHHHHHHHHhcCCccc
Confidence              378999999999999998 4555554332111111111111111        11112222344555555899999999


Q ss_pred             CCChHHHH
Q 021659          282 TISIPQIS  289 (309)
Q Consensus       282 Rps~~evl  289 (309)
                      ||++.++.
T Consensus       256 rp~~~~l~  263 (700)
T KOG2137|consen  256 RPTLDLLL  263 (700)
T ss_pred             Ccchhhhh
Confidence            99776654

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.52  E-value=8.8e-07  Score=83.22  Aligned_cols=138  Identities=17%  Similarity=0.137  Sum_probs=90.7

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEecccccc---------------------------H----H----------HHHH
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLE---------------------------K----D----------AFYR   82 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~---------------------------~----~----------~~~~   82 (309)
                      .-++.++-|.||+|++.+|+.||+|+...+-..                           .    +          .+.+
T Consensus       131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~  210 (517)
T COG0661         131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR  210 (517)
T ss_pred             CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence            368899999999999999999999988432110                           0    0          1234


Q ss_pred             HHHHHccCC----CCCcceEeeeEe--CCeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHH-HhhhhhcCC
Q 021659           83 EIQLLGRLH----HRHLLALQGFST--GRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAA-LEYLLLFSN  155 (309)
Q Consensus        83 ei~~l~~l~----h~niv~~~~~~~--~~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~-l~~lh~~h~  155 (309)
                      |+..+.+++    ...-+.+-..+.  .....++|||++|..+.+...-. ...++....   +..++.+ +..+   -.
T Consensus       211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~-~~g~d~k~i---a~~~~~~f~~q~---~~  283 (517)
T COG0661         211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALK-SAGIDRKEL---AELLVRAFLRQL---LR  283 (517)
T ss_pred             HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHH-hcCCCHHHH---HHHHHHHHHHHH---Hh
Confidence            555554442    222223333333  25678999999998888874321 244553333   3333332 2233   34


Q ss_pred             CCeeecccCCCceeeCCCCceeEeccccccccc
Q 021659          156 LPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR  188 (309)
Q Consensus       156 ~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~  188 (309)
                      .|+.|+|.+|.||+++.+|.+.+.|||+.....
T Consensus       284 dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~  316 (517)
T COG0661         284 DGFFHADPHPGNILVRSDGRIVLLDFGIVGRLD  316 (517)
T ss_pred             cCccccCCCccceEEecCCcEEEEcCcceecCC
Confidence            689999999999999999999999999876443

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.49  E-value=1.3e-07  Score=92.62  Aligned_cols=124  Identities=19%  Similarity=0.208  Sum_probs=97.1

Q ss_pred             CeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccc
Q 021659          105 RKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFF  184 (309)
Q Consensus       105 ~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~  184 (309)
                      ...+++++|+.+++|...+..  ....+..-+......+..++++|   |...+.|+|++|.|++...++..++.+|+..
T Consensus       877 sP~~L~~~~~~~~~~~Skl~~--~~~~saepaRs~i~~~vqs~e~L---~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~  951 (1205)
T KOG0606|consen  877 SPLPLVGHYLNGGDLPSKLHN--SGCLSAEPARSPILERVQSLESL---HSSLRKHRDLKPDSLLIAYDGHRPLTDFGTL  951 (1205)
T ss_pred             CCcchhhHHhccCCchhhhhc--CCCcccccccchhHHHHhhhhcc---ccchhhcccccccchhhcccCCcccCccccc
Confidence            567899999999999998876  33444444455667778899999   7777999999999999999999999999732


Q ss_pred             ccc--------------------------------------cccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhC
Q 021659          185 NSV--------------------------------------RNYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTG  224 (309)
Q Consensus       185 ~~~--------------------------------------~~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg  224 (309)
                      ...                                      ....+|+.|.+||...+  ....+|.|+.|+++++.++|
T Consensus       952 ~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g 1031 (1205)
T KOG0606|consen  952 SKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTG 1031 (1205)
T ss_pred             cccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcC
Confidence            100                                      01246788999996443  47889999999999999999


Q ss_pred             CCCCCCCcc
Q 021659          225 QSPEEGDVD  233 (309)
Q Consensus       225 ~~p~~~~~~  233 (309)
                      .+||.....
T Consensus      1032 ~pp~na~tp 1040 (1205)
T KOG0606|consen 1032 IPPFNAETP 1040 (1205)
T ss_pred             CCCCCCcch
Confidence            999986543

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=98.46  E-value=3e-06  Score=69.64  Aligned_cols=102  Identities=22%  Similarity=0.177  Sum_probs=80.4

Q ss_pred             HHHHHHccCCC-CCcceEeeeEeCCeeEEEEeeCCCCCHHHhhcC-CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCee
Q 021659           82 REIQLLGRLHH-RHLLALQGFSTGRKRLLVFDNIENGSLKEHLND-PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMY  159 (309)
Q Consensus        82 ~ei~~l~~l~h-~niv~~~~~~~~~~~~lv~e~~~~~sL~~~i~~-~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~  159 (309)
                      .|.-+++.+++ +++++++|.|..   ++++||...+++...-.. ..--..+|..+.+++.+++..+.++++.....+.
T Consensus         8 ~E~lll~~l~~~~~~pk~lG~CG~---~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~   84 (188)
T PF12260_consen    8 NEPLLLQLLQGSEPFPKLLGSCGR---FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFFY   84 (188)
T ss_pred             cHHHHHHHcCCCCCCCCeeeECCC---EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcEE
Confidence            47778888865 699999999964   678999987665421100 0023468999999999999999999765556699


Q ss_pred             ecccCCCceeeCCCCceeEeccccccc
Q 021659          160 YVSISSSSIMLDENFTAKLSDVGFFNS  186 (309)
Q Consensus       160 H~dl~p~nill~~~~~~kl~dfg~~~~  186 (309)
                      ..|++|+|+-++.++.+|++|......
T Consensus        85 lcDv~~~nfgv~~~~~lk~iDld~v~~  111 (188)
T PF12260_consen   85 LCDVSPDNFGVNDDGRLKLIDLDDVFV  111 (188)
T ss_pred             EeecchHHeEEeCCCcEEEEechhcch
Confidence            999999999999999999999987543

Proteins in this uncharacterised family are described as transmembrane proteins.

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.40  E-value=3.4e-06  Score=71.00  Aligned_cols=135  Identities=18%  Similarity=0.169  Sum_probs=92.7

Q ss_pred             ccccCCCceEEEEEEcCCcEEEEEEeccccccH--------------------HH-----HHHHHHHHccCC--CCCcce
Q 021659           45 IVYTNSHGAAYKARFQDGEVALVKEIQALNLEK--------------------DA-----FYREIQLLGRLH--HRHLLA   97 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~--------------------~~-----~~~ei~~l~~l~--h~niv~   97 (309)
                      .|.+|.-+.||+|...++..+|+|+.......-                    ++     ..+|..-|+++.  +=.+.+
T Consensus        55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~  134 (268)
T COG1718          55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPE  134 (268)
T ss_pred             eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence            577888899999988789999999985433221                    11     246777777773  344455


Q ss_pred             EeeeEeCCeeEEEEeeCCCC-CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCce
Q 021659           98 LQGFSTGRKRLLVFDNIENG-SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTA  176 (309)
Q Consensus        98 ~~~~~~~~~~~lv~e~~~~~-sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~  176 (309)
                      .+++..   ..+||||+... .-.-.+.   ..++.......+..++++.+.-|.  +..+++||||+.-|||+. ++.+
T Consensus       135 Pi~~~~---nVLvMEfIg~~g~pAP~Lk---Dv~~e~~e~~~~~~~~v~~~~~l~--~~a~LVHgDLSEyNiL~~-~~~p  205 (268)
T COG1718         135 PIAFRN---NVLVMEFIGDDGLPAPRLK---DVPLELEEAEGLYEDVVEYMRRLY--KEAGLVHGDLSEYNILVH-DGEP  205 (268)
T ss_pred             ceeecC---CeEEEEeccCCCCCCCCcc---cCCcCchhHHHHHHHHHHHHHHHH--HhcCcccccchhhheEEE-CCeE
Confidence            555543   47899998553 1111222   233333356777788888887774  457999999999999998 8899


Q ss_pred             eEeccccccccc
Q 021659          177 KLSDVGFFNSVR  188 (309)
Q Consensus       177 kl~dfg~~~~~~  188 (309)
                      .++|++.+....
T Consensus       206 ~iID~~QaV~~~  217 (268)
T COG1718         206 YIIDVSQAVTID  217 (268)
T ss_pred             EEEECccccccC
Confidence            999999775433

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.35  E-value=8.5e-06  Score=67.81  Aligned_cols=126  Identities=15%  Similarity=0.157  Sum_probs=76.9

Q ss_pred             ccccCCCceEEEEEEcCCcEEEEEEeccccccH-HHH---------HHHHHHHccCCC---CCcceEeeeEe------CC
Q 021659           45 IVYTNSHGAAYKARFQDGEVALVKEIQALNLEK-DAF---------YREIQLLGRLHH---RHLLALQGFST------GR  105 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~-~~~---------~~ei~~l~~l~h---~niv~~~~~~~------~~  105 (309)
                      .+.......|.+... +|+.+++|.......-. +.|         .+.+..+..++.   ...+.++....      ..
T Consensus        38 v~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ekk~~~~~~  116 (229)
T PF06176_consen   38 VFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAEKKIFRYTS  116 (229)
T ss_pred             eecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeeeeeecccee
Confidence            344444555666555 56788899874322212 222         234444444432   22233232221      13


Q ss_pred             eeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccc
Q 021659          106 KRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFN  185 (309)
Q Consensus       106 ~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~  185 (309)
                      ..+++|||++|..|.+...      +++    .+...+.+++.-+   |+.|+.|||.+|.|++++.+ .++++||+..+
T Consensus       117 ~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikql---H~~G~~HGD~hpgNFlv~~~-~i~iID~~~k~  182 (229)
T PF06176_consen  117 SYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQL---HKHGFYHGDPHPGNFLVSNN-GIRIIDTQGKR  182 (229)
T ss_pred             EEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHH---HHcCCccCCCCcCcEEEECC-cEEEEECcccc
Confidence            3458999999988876532      222    2345566778888   88899999999999999855 58999998543

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.33  E-value=9.1e-06  Score=68.65  Aligned_cols=140  Identities=15%  Similarity=0.104  Sum_probs=81.5

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCC--CcceEeeeEeC----CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHR--HLLALQGFSTG----RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~--niv~~~~~~~~----~~~~lv~e~~~~~  117 (309)
                      +.++.|..+.||+....+ +.+++|..... .....+..|..+++.|...  .+..++.+...    ...+++|+++++.
T Consensus         3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~-~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~   80 (239)
T PF01636_consen    3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPP-DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGR   80 (239)
T ss_dssp             EEEEESSSSEEEEEEETT-SEEEEEEESSH-HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSE
T ss_pred             ccCCCCCeeeEEEEEECC-cEEEEEEeCCC-CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccc
Confidence            357889999999999876 57889986544 3456788899999888522  35566664432    3467999999998


Q ss_pred             CHHH----------------hhc---CC--CCCCCCHHH-----HHH----H------------HHHHHH-HHhhhhh--
Q 021659          118 SLKE----------------HLN---DP--LKTPLDWKT-----RLQ----I------------AIGVAA-ALEYLLL--  152 (309)
Q Consensus       118 sL~~----------------~i~---~~--~~~~l~~~~-----~~~----i------------~~~i~~-~l~~lh~--  152 (309)
                      ++..                .+.   ..  ....+....     ...    .            ...+.. .+..++.  
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (239)
T PF01636_consen   81 PLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEALL  160 (239)
T ss_dssp             EHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhhh
Confidence            7777                110   00  111111110     000    0            011111 2222221  


Q ss_pred             --cCCCCeeecccCCCceeeC-CCCceeEecccccc
Q 021659          153 --FSNLPMYYVSISSSSIMLD-ENFTAKLSDVGFFN  185 (309)
Q Consensus       153 --~h~~~i~H~dl~p~nill~-~~~~~kl~dfg~~~  185 (309)
                        .....++|||+.|.||+++ +++.+.|+||+.+.
T Consensus       161 ~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~  196 (239)
T PF01636_consen  161 PKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG  196 (239)
T ss_dssp             HCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred             ccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence              2467899999999999999 56666799998654

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.31  E-value=1.4e-05  Score=67.74  Aligned_cols=137  Identities=9%  Similarity=0.076  Sum_probs=81.0

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCC--CcceEeeeEeC-CeeEEEEeeCCCCC-H
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHR--HLLALQGFSTG-RKRLLVFDNIENGS-L  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~--niv~~~~~~~~-~~~~lv~e~~~~~s-L  119 (309)
                      ..|++|..+.||+.   .+..+++|.... ........+|.+.++.+..-  .+...++++.+ ....+|||+++|.+ +
T Consensus         7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~-~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~   82 (226)
T TIGR02172         7 TQTGEGGNGESYTH---KTGKWMLKLYNP-GFDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSF   82 (226)
T ss_pred             eeecCCCCcceeEe---cCCCEEEEeCCC-CCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccch
Confidence            46899999999984   244567887654 33456678999999888532  34667777654 44568999999863 2


Q ss_pred             HHhhc---------------------CCCCCCCCHHHHHH-HHH----------HHHHH-Hhhhhh-cCCCCeeecccCC
Q 021659          120 KEHLN---------------------DPLKTPLDWKTRLQ-IAI----------GVAAA-LEYLLL-FSNLPMYYVSISS  165 (309)
Q Consensus       120 ~~~i~---------------------~~~~~~l~~~~~~~-i~~----------~i~~~-l~~lh~-~h~~~i~H~dl~p  165 (309)
                      ...+.                     .-.....+...... +..          .+... ..+|.. .....++|||+.|
T Consensus        83 ~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~~  162 (226)
T TIGR02172        83 SRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQI  162 (226)
T ss_pred             hhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCCC
Confidence            21111                     00001111111100 000          01111 111111 1244678999999


Q ss_pred             CceeeCCCCceeEecccccc
Q 021659          166 SSIMLDENFTAKLSDVGFFN  185 (309)
Q Consensus       166 ~nill~~~~~~kl~dfg~~~  185 (309)
                      .|++++.++ +.++||+.+.
T Consensus       163 ~Nii~~~~~-~~iIDwe~a~  181 (226)
T TIGR02172       163 GNLITSGKG-TYWIDLGDFG  181 (226)
T ss_pred             CcEEEcCCC-cEEEechhcC
Confidence            999999887 9999998654

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=98.28  E-value=1.1e-05  Score=64.41  Aligned_cols=125  Identities=13%  Similarity=0.102  Sum_probs=86.5

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcc-eEeeeEeCCeeEEEEeeCCCCCHHHh
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLL-ALQGFSTGRKRLLVFDNIENGSLKEH  122 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv-~~~~~~~~~~~~lv~e~~~~~sL~~~  122 (309)
                      +.|++|.+|.||++.+..+ .+|+|+- ..+..+..+..|+++|..+...++. .++.+..+   ++.|||++|.+|.+.
T Consensus        28 ~~L~KG~~s~Vyl~~~~~~-~~a~Kvr-r~ds~r~~l~kEakiLeil~g~~~~p~vy~yg~~---~i~me~i~G~~L~~~  102 (201)
T COG2112          28 KELAKGTTSVVYLGEWRGG-EVALKVR-RRDSPRRNLEKEAKILEILAGEGVTPEVYFYGED---FIRMEYIDGRPLGKL  102 (201)
T ss_pred             hhhhcccccEEEEeeccCc-eEEEEEe-cCCcchhhHHHHHHHHHHhhhcCCCceEEEechh---hhhhhhhcCcchhhh
Confidence            5799999999999998644 6778854 3455677899999999998765554 44444433   345999999888876


Q ss_pred             hcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccC-CCceeeCCCCceeEecccccc
Q 021659          123 LNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSIS-SSSIMLDENFTAKLSDVGFFN  185 (309)
Q Consensus       123 i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~-p~nill~~~~~~kl~dfg~~~  185 (309)
                      -..     .+...+    ..++.+---|   ...||-|+.|+ |...++..++.+.|+||.-|.
T Consensus       103 ~~~-----~~rk~l----~~vlE~a~~L---D~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At  154 (201)
T COG2112         103 EIG-----GDRKHL----LRVLEKAYKL---DRLGIEHGELSRPWKNVLVNDRDVYIIDFDSAT  154 (201)
T ss_pred             hhc-----ccHHHH----HHHHHHHHHH---HHhccchhhhcCCceeEEecCCcEEEEEccchh
Confidence            542     122233    3344443344   56689999998 444444455589999999776

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.22  E-value=2e-05  Score=67.58  Aligned_cols=137  Identities=15%  Similarity=0.113  Sum_probs=80.8

Q ss_pred             cccCCC-ceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCC-CCCcceEeeeEeC-CeeEEEEeeCCCCCHHHh
Q 021659           46 VYTNSH-GAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLH-HRHLLALQGFSTG-RKRLLVFDNIENGSLKEH  122 (309)
Q Consensus        46 lg~G~~-~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~-h~niv~~~~~~~~-~~~~lv~e~~~~~sL~~~  122 (309)
                      |..|.+ +.||+.... ++.+.+|......  ...+.+|+++++.+. +-.+.+++++... ...++||++++|.++...
T Consensus         6 ~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~--~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~   82 (244)
T cd05150           6 VTEGQSGATVYRLDGK-NPGLYLKIAPSGP--TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAAL   82 (244)
T ss_pred             cCCCCCcCeEEEEcCC-CCcEEEEecCCCc--ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHh
Confidence            333444 888999764 4677788765432  345778898888884 4445567776654 457899999999877643


Q ss_pred             hc-------------------CCC--CCCCCHH--HHHHH-----------------------HHHHHHHHhhhh-hcCC
Q 021659          123 LN-------------------DPL--KTPLDWK--TRLQI-----------------------AIGVAAALEYLL-LFSN  155 (309)
Q Consensus       123 i~-------------------~~~--~~~l~~~--~~~~i-----------------------~~~i~~~l~~lh-~~h~  155 (309)
                      ..                   ...  ..++...  .....                       ..++...|.... ....
T Consensus        83 ~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (244)
T cd05150          83 WEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEED  162 (244)
T ss_pred             hcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcCc
Confidence            21                   000  1111100  00000                       111111111110 1134


Q ss_pred             CCeeecccCCCceeeCCCCceeEecccccc
Q 021659          156 LPMYYVSISSSSIMLDENFTAKLSDVGFFN  185 (309)
Q Consensus       156 ~~i~H~dl~p~nill~~~~~~kl~dfg~~~  185 (309)
                      ..++|||+.|.|++++.++.+.|+||+.+.
T Consensus       163 ~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~  192 (244)
T cd05150         163 LVVTHGDACLPNIIVDPGKFSGFIDLGRLG  192 (244)
T ss_pred             eEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence            568999999999999988778899998653

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=98.08  E-value=2.5e-05  Score=73.44  Aligned_cols=140  Identities=16%  Similarity=0.151  Sum_probs=87.8

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccccH----------------------------H----------HHHHHHH
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEK----------------------------D----------AFYREIQ   85 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~----------------------------~----------~~~~ei~   85 (309)
                      +-|+.-+.+.||+++.++|+.||+|+-+..-...                            +          .|..|++
T Consensus       167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~  246 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK  246 (538)
T ss_pred             chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence            3699999999999999999999999764321100                            0          1234443


Q ss_pred             HHcc----CCCCCc---ceEeeeEeC--CeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCC
Q 021659           86 LLGR----LHHRHL---LALQGFSTG--RKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNL  156 (309)
Q Consensus        86 ~l~~----l~h~ni---v~~~~~~~~--~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~  156 (309)
                      ...+    +.|-+.   +.+-..+.+  ..+.++|||++|..+.+.-.= ....++..   .++..+.++...+.  -..
T Consensus       247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i-~~~gi~~~---~i~~~l~~~~~~qI--f~~  320 (538)
T KOG1235|consen  247 NAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAI-DKRGISPH---DILNKLVEAYLEQI--FKT  320 (538)
T ss_pred             hHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHH-HHcCCCHH---HHHHHHHHHHHHHH--Hhc
Confidence            3332    234441   112222222  578899999999866654211 12445544   34444444433221  456


Q ss_pred             CeeecccCCCceeeCC----CCceeEecccccccccc
Q 021659          157 PMYYVSISSSSIMLDE----NFTAKLSDVGFFNSVRN  189 (309)
Q Consensus       157 ~i~H~dl~p~nill~~----~~~~kl~dfg~~~~~~~  189 (309)
                      |++|+|=+|.||++..    ++.+.+-|||+....++
T Consensus       321 GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~  357 (538)
T KOG1235|consen  321 GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH  357 (538)
T ss_pred             CCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence            7999999999999983    67899999999765543

>PLN02876 acyl-CoA dehydrogenase

Probab=98.01  E-value=0.00011  Score=74.00  Aligned_cols=75  Identities=13%  Similarity=0.173  Sum_probs=54.6

Q ss_pred             cccccCCCceEEEEEEcCC---cEEEEEEecccc--ccHHHHHHHHHHHccCC-CCCc--ceEeeeEeC----CeeEEEE
Q 021659           44 RIVYTNSHGAAYKARFQDG---EVALVKEIQALN--LEKDAFYREIQLLGRLH-HRHL--LALQGFSTG----RKRLLVF  111 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~---~~va~K~~~~~~--~~~~~~~~ei~~l~~l~-h~ni--v~~~~~~~~----~~~~lv~  111 (309)
                      +.++.|.++.+|+....++   ..+++|+.....  .....+.+|+++++.|. |.++  .+++.+|.+    +..|+||
T Consensus        44 ~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVM  123 (822)
T PLN02876         44 SQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIM  123 (822)
T ss_pred             EEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEE
Confidence            4688899999999887553   356777664322  23456889999999995 6654  777787765    3678999


Q ss_pred             eeCCCCC
Q 021659          112 DNIENGS  118 (309)
Q Consensus       112 e~~~~~s  118 (309)
                      ||++|..
T Consensus       124 E~v~G~~  130 (822)
T PLN02876        124 EYLEGRI  130 (822)
T ss_pred             EecCCcc
Confidence            9998864

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.97  E-value=9.9e-05  Score=62.78  Aligned_cols=74  Identities=15%  Similarity=0.069  Sum_probs=46.8

Q ss_pred             cccccCCCceEEEEEEcC--CcEEEEEEeccccccHHHHHHHHHHHccCC-CCCcceEeeeEeCCeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARFQD--GEVALVKEIQALNLEKDAFYREIQLLGRLH-HRHLLALQGFSTGRKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~--~~~va~K~~~~~~~~~~~~~~ei~~l~~l~-h~niv~~~~~~~~~~~~lv~e~~~~~sL~  120 (309)
                      +.|..|-.+.+|+....+  +..|++|+........-...+|+.+++.+. +.-..++++...   ..+++||++|.++.
T Consensus         4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~---~~~l~e~i~G~~l~   80 (235)
T cd05157           4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATFQ---NGLIYEFIPGRTLE   80 (235)
T ss_pred             EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEeC---CcEEEEeeCCCcCC
Confidence            346778888999998764  677889976432211112346888888884 333344544433   24799999987653

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=97.89  E-value=0.00013  Score=62.28  Aligned_cols=71  Identities=17%  Similarity=0.103  Sum_probs=43.1

Q ss_pred             ccccCCCc-eEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCC---CcceEeeeEeC----CeeEEEEeeCCC
Q 021659           45 IVYTNSHG-AAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHR---HLLALQGFSTG----RKRLLVFDNIEN  116 (309)
Q Consensus        45 ~lg~G~~~-~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~---niv~~~~~~~~----~~~~lv~e~~~~  116 (309)
                      .++.|+.. .||+.    +..+++|.... ......+.+|.+.+..|...   .+..+++....    ...+++|++++|
T Consensus         4 ~~~~gG~~n~vy~~----~~~~VlR~~~~-~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~G   78 (235)
T cd05155           4 PVDSGGTDNATFRL----GDDMSVRLPSA-AGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLEG   78 (235)
T ss_pred             eccCCCcccceEEc----CCceEEEcCCc-cchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeecC
Confidence            35555554 58876    23466776543 22345788999999887531   33444444332    234789999998


Q ss_pred             CCHH
Q 021659          117 GSLK  120 (309)
Q Consensus       117 ~sL~  120 (309)
                      .++.
T Consensus        79 ~~l~   82 (235)
T cd05155          79 ETAT   82 (235)
T ss_pred             CCCC
Confidence            7664

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PRK10593 hypothetical protein; Provisional

Probab=97.78  E-value=0.00058  Score=60.38  Aligned_cols=74  Identities=12%  Similarity=0.088  Sum_probs=54.3

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCC---CCcceEeeeEeC----CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHH---RHLLALQGFSTG----RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h---~niv~~~~~~~~----~~~~lv~e~~~~  116 (309)
                      +.|+.|..+.||.....+++ +.+|..+ .......+..|.+.|+.|..   -.+.++++++..    +..++|||++++
T Consensus        20 ~~i~~G~~~~vy~~~~~~~~-~~~k~~~-~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G   97 (297)
T PRK10593         20 ECISEQPYAALWALYDSQGN-PMPLMAR-SFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLRG   97 (297)
T ss_pred             eecCCccceeEEEEEcCCCC-EEEEEec-ccccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccCC
Confidence            46999999999999765564 5566643 22234678999999998852   367788887642    457999999998


Q ss_pred             CCH
Q 021659          117 GSL  119 (309)
Q Consensus       117 ~sL  119 (309)
                      +++
T Consensus        98 ~~~  100 (297)
T PRK10593         98 VSV  100 (297)
T ss_pred             Eec
Confidence            754

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.77  E-value=0.00058  Score=56.50  Aligned_cols=125  Identities=16%  Similarity=0.150  Sum_probs=82.5

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEecccc-----------------ccHHHHHHHHHHHccCC------CCCcceEee
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALN-----------------LEKDAFYREIQLLGRLH------HRHLLALQG  100 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~-----------------~~~~~~~~ei~~l~~l~------h~niv~~~~  100 (309)
                      ..||+|+.-.||.--.  .....+|+.....                 ...++..+|+.....+.      +.+|.+++|
T Consensus         7 ~~i~~G~~R~cy~HP~--dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G   84 (199)
T PF10707_consen    7 DLIAQGGERDCYQHPD--DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFYG   84 (199)
T ss_pred             cccccCCCceEEECCC--CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEeE
Confidence            4699999999996543  3334578775433                 12345566766665554      788999999


Q ss_pred             eEe-CCeeEEEEeeCC------CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC
Q 021659          101 FST-GRKRLLVFDNIE------NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN  173 (309)
Q Consensus       101 ~~~-~~~~~lv~e~~~------~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~  173 (309)
                      +.. +....+|+|.+.      ..||.+++..   ..++. ...+.+.++   ..+|   -...|+.+|++|.||++...
T Consensus        85 ~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~---~~~~~-~~~~~L~~f---~~~l---~~~~Iv~~dl~~~NIv~~~~  154 (199)
T PF10707_consen   85 FVETNLGLGLVVELIRDADGNISPTLEDYLKE---GGLTE-ELRQALDEF---KRYL---LDHHIVIRDLNPHNIVVQRR  154 (199)
T ss_pred             EEecCCceEEEEEEEECCCCCcCccHHHHHHc---CCccH-HHHHHHHHH---HHHH---HHcCCeecCCCcccEEEEec
Confidence            775 455668888752      2488899864   44655 444444444   3455   55679999999999999643


Q ss_pred             --C--ceeEec
Q 021659          174 --F--TAKLSD  180 (309)
Q Consensus       174 --~--~~kl~d  180 (309)
                        +  .+.|+|
T Consensus       155 ~~~~~~lvlID  165 (199)
T PF10707_consen  155 DSGEFRLVLID  165 (199)
T ss_pred             CCCceEEEEEe
Confidence              2  466665

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.66  E-value=0.00038  Score=60.08  Aligned_cols=135  Identities=13%  Similarity=0.077  Sum_probs=74.9

Q ss_pred             cccCCCceEEEEEEcCCcEEEEEEeccccccH-HHHHHHHHHHccCCCCCc-ceEeeeEeCCeeEEEEeeCCCCCHHHh-
Q 021659           46 VYTNSHGAAYKARFQDGEVALVKEIQALNLEK-DAFYREIQLLGRLHHRHL-LALQGFSTGRKRLLVFDNIENGSLKEH-  122 (309)
Q Consensus        46 lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~-~~~~~ei~~l~~l~h~ni-v~~~~~~~~~~~~lv~e~~~~~sL~~~-  122 (309)
                      +..|-.+.+|+... ++..+++|........- -...+|.++++.+....+ .+++....   .++|+||++|.++... 
T Consensus         4 ~~~G~tn~~y~~~~-~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~---~~~v~e~i~G~~~~~~~   79 (256)
T TIGR02721         4 LSGGLTNRSWRIEH-PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE---HWLLVEWLEGEVITLDQ   79 (256)
T ss_pred             CCCcCcCCeEEEEe-CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC---CEEEEEeccCccccccc
Confidence            45677889998874 46677788754322111 134678888888853323 34444332   3689999998665421 


Q ss_pred             ----------------hcCC--CCCCCCHH-HHHHHHHHH---------HHHHhhhhh-----cCCCCeeecccCCCcee
Q 021659          123 ----------------LNDP--LKTPLDWK-TRLQIAIGV---------AAALEYLLL-----FSNLPMYYVSISSSSIM  169 (309)
Q Consensus       123 ----------------i~~~--~~~~l~~~-~~~~i~~~i---------~~~l~~lh~-----~h~~~i~H~dl~p~nil  169 (309)
                                      +...  ...+++.. ....+..++         ...+..+-.     .-...++|+|+.|.||+
T Consensus        80 ~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Nil  159 (256)
T TIGR02721        80 FVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNLV  159 (256)
T ss_pred             ccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcEE
Confidence                            1111  11122221 111111111         111111100     01346899999999999


Q ss_pred             eCCCCceeEecccccc
Q 021659          170 LDENFTAKLSDVGFFN  185 (309)
Q Consensus       170 l~~~~~~kl~dfg~~~  185 (309)
                      ++.++ +.++||..+.
T Consensus       160 ~~~~~-~~lIDwE~a~  174 (256)
T TIGR02721       160 VTPQG-LKLIDWEYAS  174 (256)
T ss_pred             EeCCC-CEEEeccccC
Confidence            98876 7899998653

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=97.58  E-value=0.0028  Score=58.15  Aligned_cols=73  Identities=12%  Similarity=0.142  Sum_probs=52.1

Q ss_pred             cccccCCCceEEEEEEcCC-cEEEEEEecc-------c-cccHHHHHHHHHHHccCC---CCCcceEeeeEeCCeeEEEE
Q 021659           44 RIVYTNSHGAAYKARFQDG-EVALVKEIQA-------L-NLEKDAFYREIQLLGRLH---HRHLLALQGFSTGRKRLLVF  111 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~-~~va~K~~~~-------~-~~~~~~~~~ei~~l~~l~---h~niv~~~~~~~~~~~~lv~  111 (309)
                      +.+|.|..+.||++...+| +.+++|.-..       . ....++...|.+.|+.+.   ..++.+++.+. ....++||
T Consensus        32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D-~~~~~lVM  110 (401)
T PRK09550         32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYD-EELAVTVM  110 (401)
T ss_pred             eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEEC-CCCCEEEE
Confidence            4689999999999998776 4788887421       1 234567778888888873   24566666663 35578999


Q ss_pred             eeCCCC
Q 021659          112 DNIENG  117 (309)
Q Consensus       112 e~~~~~  117 (309)
                      |++++.
T Consensus       111 E~L~~~  116 (401)
T PRK09550        111 EDLSDH  116 (401)
T ss_pred             ecCCCc
Confidence            999763

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=97.52  E-value=0.00049  Score=60.90  Aligned_cols=73  Identities=19%  Similarity=0.124  Sum_probs=46.8

Q ss_pred             ccccCCCceEEEEEEcC-------CcEEEEEEeccccccHHHHHHHHHHHccCCCCC-cceEeeeEeCCeeEEEEeeCCC
Q 021659           45 IVYTNSHGAAYKARFQD-------GEVALVKEIQALNLEKDAFYREIQLLGRLHHRH-LLALQGFSTGRKRLLVFDNIEN  116 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~~-------~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~n-iv~~~~~~~~~~~~lv~e~~~~  116 (309)
                      .+..|-.+.+|+....+       ++.+++|+.............|.+++..+.... ..++++++.+   ..|++|++|
T Consensus         5 ~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~---~~v~e~i~G   81 (302)
T cd05156           5 KISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNLGPKLYGIFPN---GRIEEFIPS   81 (302)
T ss_pred             EecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCCCCceEEEeCC---CchhheeCC
Confidence            45567778999998654       478889987543322234567888888885322 3345554432   357899888


Q ss_pred             CCHH
Q 021659          117 GSLK  120 (309)
Q Consensus       117 ~sL~  120 (309)
                      .++.
T Consensus        82 ~~l~   85 (302)
T cd05156          82 RTLT   85 (302)
T ss_pred             CcCC
Confidence            6654

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.49  E-value=0.00093  Score=58.90  Aligned_cols=138  Identities=12%  Similarity=0.043  Sum_probs=79.6

Q ss_pred             ccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCC--CcceEeee-----E--eCCeeEEEEeeCC
Q 021659           45 IVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHR--HLLALQGF-----S--TGRKRLLVFDNIE  115 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~--niv~~~~~-----~--~~~~~~lv~e~~~  115 (309)
                      .+..|....+|+....+ ..+++|....  .....+..|++++..|.+.  .+.+++..     .  .++..++++++++
T Consensus        21 ~i~~G~~n~~y~v~~~~-~~~vLr~~~~--~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~i~   97 (296)
T cd05153          21 GISAGIENTNYFVTTDS-GRYVLTLFEK--VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEFLA   97 (296)
T ss_pred             cccCccccceEEEEeCC-CcEEEEEcCC--CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEeCC
Confidence            56778778999987644 4677887754  3445677788888877422  23343331     1  1245678999999


Q ss_pred             CCCHHH-----------hh---cC---C-CC-----CCCCHHHHH----------HHHHHHHHHHhhhhh----cCCCCe
Q 021659          116 NGSLKE-----------HL---ND---P-LK-----TPLDWKTRL----------QIAIGVAAALEYLLL----FSNLPM  158 (309)
Q Consensus       116 ~~sL~~-----------~i---~~---~-~~-----~~l~~~~~~----------~i~~~i~~~l~~lh~----~h~~~i  158 (309)
                      |.++..           .+   ..   . ..     ....|....          .....+..++.++-.    .-..++
T Consensus        98 G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~l  177 (296)
T cd05153          98 GEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPRGV  177 (296)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCCcC
Confidence            866432           00   00   0 00     011111110          011112223333321    123579


Q ss_pred             eecccCCCceeeCCCCceeEecccccc
Q 021659          159 YYVSISSSSIMLDENFTAKLSDVGFFN  185 (309)
Q Consensus       159 ~H~dl~p~nill~~~~~~kl~dfg~~~  185 (309)
                      +|||+.|.|++++.++.+.|+||+.+.
T Consensus       178 ~HgD~~~~Nil~~~~~~~~iIDfe~a~  204 (296)
T cd05153         178 IHADLFRDNVLFDGDELSGVIDFYFAC  204 (296)
T ss_pred             CccCcCcccEEEeCCceEEEeehhhhc
Confidence            999999999999988777899998653

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=97.45  E-value=0.00011  Score=64.45  Aligned_cols=129  Identities=11%  Similarity=0.072  Sum_probs=89.5

Q ss_pred             cccccccCCCceEEEEEEcCCcEEEEEEecccccc-----------------------HHHHHHHHHHHccCC-CC-Ccc
Q 021659           42 FHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLE-----------------------KDAFYREIQLLGRLH-HR-HLL   96 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~-----------------------~~~~~~ei~~l~~l~-h~-niv   96 (309)
                      +..+||-|.-+.+|.+-.+.|.+.++|.=.....+                       +-...+|...++.|. |. .+.
T Consensus        96 vGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gfpVP  175 (465)
T KOG2268|consen   96 VGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGFPVP  175 (465)
T ss_pred             hccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCCCCC
Confidence            34689999999999999988999888843211110                       112356788887774 22 334


Q ss_pred             eEeeeEeCCeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCce
Q 021659           97 ALQGFSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTA  176 (309)
Q Consensus        97 ~~~~~~~~~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~  176 (309)
                      +.++++   ..++|||++.+-+|.+.-.-     .+.+   .+...+..-+--|   ...|+||||.+--||++..++.+
T Consensus       176 kpiD~~---RH~Vvmelv~g~Pl~~v~~v-----~d~~---~ly~~lm~~Iv~l---a~~GlIHgDFNEFNimv~dd~~i  241 (465)
T KOG2268|consen  176 KPIDHN---RHCVVMELVDGYPLRQVRHV-----EDPP---TLYDDLMGLIVRL---ANHGLIHGDFNEFNIMVKDDDKI  241 (465)
T ss_pred             Cccccc---ceeeHHHhhcccceeeeeec-----CChH---HHHHHHHHHHHHH---HHcCceecccchheeEEecCCCE
Confidence            445433   45789999999888775421     2222   2334444455666   77899999999999999999999


Q ss_pred             eEeccccc
Q 021659          177 KLSDVGFF  184 (309)
Q Consensus       177 kl~dfg~~  184 (309)
                      +++||-.+
T Consensus       242 ~vIDFPQm  249 (465)
T KOG2268|consen  242 VVIDFPQM  249 (465)
T ss_pred             EEeechHh
Confidence            99999754

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=97.33  E-value=0.00011  Score=69.53  Aligned_cols=171  Identities=13%  Similarity=0.018  Sum_probs=113.0

Q ss_pred             ccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCC-cceEeeeEe-CCeeEEEEeeCCCC-CHHH
Q 021659           45 IVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRH-LLALQGFST-GRKRLLVFDNIENG-SLKE  121 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~n-iv~~~~~~~-~~~~~lv~e~~~~~-sL~~  121 (309)
                      .+++|+++++++.+....+....+.+...    ....-++++|.+++||| .+..++-++ +...+++++++.++ +...
T Consensus       249 ~fvK~altknpKkRptaeklL~h~fvs~~----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~~~  324 (829)
T KOG0576|consen  249 NFVKGALTKNPKKRPTAEKLLQHPFVSQT----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSSAL  324 (829)
T ss_pred             HHHHHHhcCCCccCCChhhheeceeeccc----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCccccc
Confidence            47888999999988533333334444322    34567899999999999 444444222 34566889999876 3322


Q ss_pred             hhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------ccCCCCC
Q 021659          122 HLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------NYATMPH  195 (309)
Q Consensus       122 ~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------~~~~~~~  195 (309)
                      .... ....+.......+...-.++++++   |+..-+|+|    ||+.++ +..+..+|+....+.      ...+++.
T Consensus       325 ~~~~-se~~~~~~~~~~~~r~et~~l~~l---~~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~~~~t~~~~~~  395 (829)
T KOG0576|consen  325 EMTV-SEIALEQYQFAYPLRKETRPLAEL---HSSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTMKPRTAIGTPE  395 (829)
T ss_pred             cCCh-hhHhhhhhhhhhhhhhhccccccc---ccccccCcc----cccccc-cccccccccCCcccCcccccccCCCCCC
Confidence            2221 123455555566677777888899   555456777    666544 678899999875443      3467788


Q ss_pred             CCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCC
Q 021659          196 SSCPEDCST--QDCSNIIFQLGVLILELVTGQSPE  228 (309)
Q Consensus       196 ~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~  228 (309)
                      +++||....  .....|+|++|.-..++.-|-+|-
T Consensus       396 ~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr  430 (829)
T KOG0576|consen  396 PLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR  430 (829)
T ss_pred             CCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence            899995333  367789999998777877777764

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=97.32  E-value=0.00046  Score=69.43  Aligned_cols=186  Identities=17%  Similarity=0.204  Sum_probs=121.0

Q ss_pred             HHHHHHHccCCCCCcceEeeeEeC---Ce--eEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCC
Q 021659           81 YREIQLLGRLHHRHLLALQGFSTG---RK--RLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSN  155 (309)
Q Consensus        81 ~~ei~~l~~l~h~niv~~~~~~~~---~~--~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~  155 (309)
                      .-|.+.+.+..|+|++.++.|...   ..  ..+..+++..-++...+..  -..++..++..+..++.+||.++|..  
T Consensus       230 E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~--v~~i~~~~~r~~~~~~~~GL~~~h~~--  305 (1351)
T KOG1035|consen  230 EIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQS--VGSIPLETLRILHQKLLEGLAYLHSL--  305 (1351)
T ss_pred             HHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhh--ccccCHHHHHHHHHHHhhhHHHHHHh--
Confidence            346677788899999999987643   11  1234578888888888876  56778888999999999999999654  


Q ss_pred             CCeeecccCCC---ceeeCCCCceeEe--cccccccccccC------CCCCCCCCCCCCC----CCCCCcEeehhhHHHH
Q 021659          156 LPMYYVSISSS---SIMLDENFTAKLS--DVGFFNSVRNYA------TMPHSSCPEDCST----QDCSNIIFQLGVLILE  220 (309)
Q Consensus       156 ~~i~H~dl~p~---nill~~~~~~kl~--dfg~~~~~~~~~------~~~~~~~PE~~~~----~~~~~Dv~slG~~l~~  220 (309)
                       ...|.-+..+   +..++..+.+.+.  ||+.+.......      .+..+.++|....    ..+..|+|++|.....
T Consensus       306 -~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~  384 (1351)
T KOG1035|consen  306 -SLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQ  384 (1351)
T ss_pred             -ccceeEEecccccccccCccceeecchhhhcccccCCCcccchhhcCccccccccccccccchhhhhhHHHHHHHHHhh
Confidence             3334444433   4445566666666  887766554332      2334445553222    2345799999999999


Q ss_pred             HHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHH
Q 021659          221 LVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYL  292 (309)
Q Consensus       221 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L  292 (309)
                      +..|..+-........             +.+.     ....   .+.....+|+..++++|+++.+++...
T Consensus       385 ~~~~~~i~~~~~~~~~-------------~l~~-----~~~~---~~~d~~~~~~~~~~~~Rl~~~~ll~~~  435 (1351)
T KOG1035|consen  385 LSQGEDISEKSAVPVS-------------LLDV-----LSTS---ELLDALPKCLDEDSEERLSALELLTHP  435 (1351)
T ss_pred             hhhcCcccccccchhh-------------hhcc-----ccch---hhhhhhhhhcchhhhhccchhhhhhch
Confidence            9888876432211100             0011     0111   344556699999999999999998654

>PRK05231 homoserine kinase; Provisional

Probab=97.27  E-value=0.0031  Score=56.24  Aligned_cols=138  Identities=12%  Similarity=0.090  Sum_probs=74.1

Q ss_pred             ccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCC--CcceEee-----e--EeCCeeEEEEeeCC
Q 021659           45 IVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHR--HLLALQG-----F--STGRKRLLVFDNIE  115 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~--niv~~~~-----~--~~~~~~~lv~e~~~  115 (309)
                      .++.|....+|+....+| .+++|+..  ....+.+..|+..+..|...  .+..++.     .  ...+..++++++++
T Consensus        29 ~l~~G~~n~~y~v~t~~g-~~vLK~~~--~~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~~l~  105 (319)
T PRK05231         29 GIAEGIENSNFFLTTTQG-EYVLTLFE--RLTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVTFLE  105 (319)
T ss_pred             hhccccccceEEEEeCCC-cEEEEEec--cCChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEEecC
Confidence            466777788999887655 57788775  22334455566666666311  1233332     1  12356789999998


Q ss_pred             CCCHH-----------HhhcC-----CC-------CCCCCH-HHHHH------------HHHHHHH-HHhhhhhc----C
Q 021659          116 NGSLK-----------EHLND-----PL-------KTPLDW-KTRLQ------------IAIGVAA-ALEYLLLF----S  154 (309)
Q Consensus       116 ~~sL~-----------~~i~~-----~~-------~~~l~~-~~~~~------------i~~~i~~-~l~~lh~~----h  154 (309)
                      |..+.           +.+..     ..       ...+.+ .....            .+.+.++ .+..+-..    -
T Consensus       106 G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l  185 (319)
T PRK05231        106 GKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLASAAWPAL  185 (319)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhhccccccC
Confidence            86431           11110     00       001111 11111            1111111 11222100    1


Q ss_pred             CCCeeecccCCCceeeCCCCceeEecccccc
Q 021659          155 NLPMYYVSISSSSIMLDENFTAKLSDVGFFN  185 (309)
Q Consensus       155 ~~~i~H~dl~p~nill~~~~~~kl~dfg~~~  185 (309)
                      ..+++|||+.|.||+++.+...-++||+.+.
T Consensus       186 p~~liHgD~~~~Nil~~~~~~~~iIDf~~~~  216 (319)
T PRK05231        186 PRGVIHADLFRDNVLFEGDRLSGFIDFYFAC  216 (319)
T ss_pred             CcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence            4589999999999999876666899998653

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.24  E-value=0.0037  Score=51.60  Aligned_cols=116  Identities=22%  Similarity=0.308  Sum_probs=76.8

Q ss_pred             cccccCCC-ceEEEEEEcCCcEEEEEEecc-----c-----c------------ccHHHHHHHHHHHccCC---CCCc--
Q 021659           44 RIVYTNSH-GAAYKARFQDGEVALVKEIQA-----L-----N------------LEKDAFYREIQLLGRLH---HRHL--   95 (309)
Q Consensus        44 ~~lg~G~~-~~v~~~~~~~~~~va~K~~~~-----~-----~------------~~~~~~~~ei~~l~~l~---h~ni--   95 (309)
                      +.||.|.- |.||+++. +|..+|+|++..     .     .            .....|..|.+...+|+   +.++  
T Consensus        43 efLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~~e~~~A  121 (207)
T PF13095_consen   43 EFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAGREGLWA  121 (207)
T ss_pred             eecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhccccCceE
Confidence            68999999 99999998 567999999311     0     0            00124677887777774   4566  


Q ss_pred             ceEeeeEe-C------------------CeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCC
Q 021659           96 LALQGFST-G------------------RKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNL  156 (309)
Q Consensus        96 v~~~~~~~-~------------------~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~  156 (309)
                      ++.+||.. +                  ..+.+|.||++...           .+....    +.++++-+..+   |..
T Consensus       122 vkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-----------~~~~~~----~~~~~~dl~~~---~k~  183 (207)
T PF13095_consen  122 VKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-----------PLQIRD----IPQMLRDLKIL---HKL  183 (207)
T ss_pred             EEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-----------ccchhH----HHHHHHHHHHH---HHC
Confidence            77788641 1                  11235666655422           222222    34455555666   899


Q ss_pred             CeeecccCCCceeeCCCCceeEecccc
Q 021659          157 PMYYVSISSSSIMLDENFTAKLSDVGF  183 (309)
Q Consensus       157 ~i~H~dl~p~nill~~~~~~kl~dfg~  183 (309)
                      ||+-+|+++.|..     .-+|+|||.
T Consensus       184 gI~~~Dv~~~ny~-----~G~lvDfs~  205 (207)
T PF13095_consen  184 GIVPRDVKPRNYR-----GGKLVDFSS  205 (207)
T ss_pred             CeeeccCcccccc-----CCEEEeccc
Confidence            9999999999997     457889985

>PLN02756 S-methyl-5-thioribose kinase

Probab=97.20  E-value=0.0082  Score=55.05  Aligned_cols=78  Identities=17%  Similarity=0.129  Sum_probs=51.3

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEec-----ccc---ccHHHHHHHHHHHccCC---CCCcceEeeeEeCCeeEEEEe
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQ-----ALN---LEKDAFYREIQLLGRLH---HRHLLALQGFSTGRKRLLVFD  112 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~-----~~~---~~~~~~~~ei~~l~~l~---h~niv~~~~~~~~~~~~lv~e  112 (309)
                      +.+|.|..+.||+.... ++.+++|.-.     .+.   ....+-..|.+.|+.+.   ..++.+++.++.+ ..+++||
T Consensus        38 ~eiggGn~N~VyrV~~~-~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded-~~vlvME  115 (418)
T PLN02756         38 KEVGDGNLNFVYIVVSS-SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRT-MALIGMR  115 (418)
T ss_pred             EEcCCCceeeEEEEEcC-CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCC-CCEEEEe
Confidence            47899999999998874 4457788764     111   23344455677776663   3477788888874 4577899


Q ss_pred             eCCC--CCHHHhh
Q 021659          113 NIEN--GSLKEHL  123 (309)
Q Consensus       113 ~~~~--~sL~~~i  123 (309)
                      ++++  ..+.+-+
T Consensus       116 ~L~~~~~ilr~~L  128 (418)
T PLN02756        116 YLEPPHIILRKGL  128 (418)
T ss_pred             ecCCcceehhhhh
Confidence            9976  3444433

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=97.13  E-value=0.0088  Score=53.91  Aligned_cols=79  Identities=19%  Similarity=0.127  Sum_probs=48.8

Q ss_pred             ccccCCCceEEEEEEcCC-cEEEEEEec----c----ccccHHHHHHHHHHHccCC--CCCcceEeeeEeCCeeEEEEee
Q 021659           45 IVYTNSHGAAYKARFQDG-EVALVKEIQ----A----LNLEKDAFYREIQLLGRLH--HRHLLALQGFSTGRKRLLVFDN  113 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~~~-~~va~K~~~----~----~~~~~~~~~~ei~~l~~l~--h~niv~~~~~~~~~~~~lv~e~  113 (309)
                      .+|-|..+.||++..+++ +.+++|--.    .    -+...++..-|.+.|+...  -|..++-+-+++.....+|||+
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D~e~~~~vMEd   81 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHFDTEMAVTVMED   81 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEEccccceehHhh
Confidence            478899999999997654 567777552    1    1233455667778887663  3433433334445566789999


Q ss_pred             CCC-CCHHHhh
Q 021659          114 IEN-GSLKEHL  123 (309)
Q Consensus       114 ~~~-~sL~~~i  123 (309)
                      ++. ..|++.+
T Consensus        82 L~~~~ilR~~L   92 (370)
T TIGR01767        82 LSHHKIARKGL   92 (370)
T ss_pred             CccchHHHHHH
Confidence            854 3343433

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=97.04  E-value=0.0095  Score=52.87  Aligned_cols=139  Identities=10%  Similarity=0.053  Sum_probs=78.0

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCC--CCcceEeee-----E--eCCeeEEEEeeC
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHH--RHLLALQGF-----S--TGRKRLLVFDNI  114 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h--~niv~~~~~-----~--~~~~~~lv~e~~  114 (309)
                      +.++.|..+.+|+....++ .+++|..... ...+.+..|++++..|..  -++.+++..     .  .++..+++++|+
T Consensus        28 ~~~~~G~~n~~y~v~t~~~-~~vLK~~~~~-~~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e~i  105 (307)
T TIGR00938        28 KGIAEGVENSNYLLTTDVG-RYILTLYEKR-VKAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVEFL  105 (307)
T ss_pred             cccCCccccceEEEEeCCC-cEEEEEecCC-CCHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEEeC
Confidence            3466777789999876555 5668876432 124456677777777742  123343331     1  135567999999


Q ss_pred             CCCCHHH-----------hh---cC-CCC--C------C-CCHHHHH------------HHHHHHHHHHhhhhh----cC
Q 021659          115 ENGSLKE-----------HL---ND-PLK--T------P-LDWKTRL------------QIAIGVAAALEYLLL----FS  154 (309)
Q Consensus       115 ~~~sL~~-----------~i---~~-~~~--~------~-l~~~~~~------------~i~~~i~~~l~~lh~----~h  154 (309)
                      +|.++..           .+   .. ...  .      . -.|....            .....+.+.++++..    ..
T Consensus       106 ~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~  185 (307)
T TIGR00938       106 QGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPRDL  185 (307)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhhcC
Confidence            8854321           11   00 000  0      0 0111100            001112233444421    13


Q ss_pred             CCCeeecccCCCceeeCCCCceeEeccccc
Q 021659          155 NLPMYYVSISSSSIMLDENFTAKLSDVGFF  184 (309)
Q Consensus       155 ~~~i~H~dl~p~nill~~~~~~kl~dfg~~  184 (309)
                      ..+++|||+++.|++++.++.+.|+||+.+
T Consensus       186 ~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~  215 (307)
T TIGR00938       186 PRGVIHADLFPDNVLFDGDSVKGVIDFYFA  215 (307)
T ss_pred             CCccCCCCCCcCcEEEECCceEEEeecccc
Confidence            578999999999999998877789999865

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=96.91  E-value=0.0076  Score=54.08  Aligned_cols=134  Identities=14%  Similarity=0.150  Sum_probs=92.2

Q ss_pred             ccccCCCceEEEEEEcCCcEEEEEEeccccc---c--------------------HH----HHHHHHHHHccCCCCCcce
Q 021659           45 IVYTNSHGAAYKARFQDGEVALVKEIQALNL---E--------------------KD----AFYREIQLLGRLHHRHLLA   97 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~---~--------------------~~----~~~~ei~~l~~l~h~niv~   97 (309)
                      .|.+|.-+.||.+...+|..+|+|+.+-+-.   +                    ++    ....|+.-|++|+.-.|.-
T Consensus       151 CiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGIP~  230 (520)
T KOG2270|consen  151 CISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGIPC  230 (520)
T ss_pred             ccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            5888989999999998999999998753211   0                    11    1346888888886444332


Q ss_pred             EeeeEeCCeeEEEEeeCCCC-CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCce
Q 021659           98 LQGFSTGRKRLLVFDNIENG-SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTA  176 (309)
Q Consensus        98 ~~~~~~~~~~~lv~e~~~~~-sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~  176 (309)
                      .--... ....|||+|+... =-.-.+.   ...++...+..+-.+++.-+.-|.  +..+.+|.||+--|+|+ .+|.+
T Consensus       231 PePIlL-k~hVLVM~FlGrdgw~aPkLK---d~~ls~~ka~~~Y~~~v~~MR~lY--~~c~LVHADLSEfN~Ly-hdG~l  303 (520)
T KOG2270|consen  231 PEPILL-KNHVLVMEFLGRDGWAAPKLK---DASLSTSKARELYQQCVRIMRRLY--QKCRLVHADLSEFNLLY-HDGKL  303 (520)
T ss_pred             CCceee-ecceEeeeeccCCCCcCcccc---cccCChHHHHHHHHHHHHHHHHHH--HHhceeccchhhhhheE-ECCEE
Confidence            111111 3457899998531 1112222   356777777777788888787776  67789999999999998 66789


Q ss_pred             eEecccccc
Q 021659          177 KLSDVGFFN  185 (309)
Q Consensus       177 kl~dfg~~~  185 (309)
                      .++|.+.+.
T Consensus       304 yiIDVSQSV  312 (520)
T KOG2270|consen  304 YIIDVSQSV  312 (520)
T ss_pred             EEEEccccc
Confidence            999998664

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=96.87  E-value=0.0093  Score=52.15  Aligned_cols=31  Identities=16%  Similarity=0.141  Sum_probs=25.1

Q ss_pred             CCCeeecccCCCceeeCCCCc-eeEecccccc
Q 021659          155 NLPMYYVSISSSSIMLDENFT-AKLSDVGFFN  185 (309)
Q Consensus       155 ~~~i~H~dl~p~nill~~~~~-~kl~dfg~~~  185 (309)
                      ...++|||++|.|++++.++. .-|+||+.+.
T Consensus       184 ~~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~  215 (276)
T cd05152         184 HTVLVHGDLHPGHILIDEDARVTGLIDWTEAK  215 (276)
T ss_pred             CCeeEeCCCCCCcEEEeCCCCEEEEECcHhcc
Confidence            446899999999999987555 4699999764

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PRK12396 5-methylribose kinase; Reviewed

Probab=96.71  E-value=0.011  Score=54.06  Aligned_cols=72  Identities=10%  Similarity=0.057  Sum_probs=46.4

Q ss_pred             cccccCCCceEEEEEEcC-CcEEEEEEec----c--c-cccHHHHHHHHHHHccCC--CCCcceEeeeEeCCeeEEEEee
Q 021659           44 RIVYTNSHGAAYKARFQD-GEVALVKEIQ----A--L-NLEKDAFYREIQLLGRLH--HRHLLALQGFSTGRKRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~-~~~va~K~~~----~--~-~~~~~~~~~ei~~l~~l~--h~niv~~~~~~~~~~~~lv~e~  113 (309)
                      +.||-|..+.||++...+ ++.+++|--.    .  + +...++..-|.+.|+.+.  .|..++-+-+++.....+|||+
T Consensus        35 ~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~D~e~~~~vMEd  114 (409)
T PRK12396         35 KEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLFDSVMNCCVMED  114 (409)
T ss_pred             eEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEECcHHhhHHHHh
Confidence            468999999999999742 4567777541    1  1 334566777888888763  3544443334444556678888


Q ss_pred             CC
Q 021659          114 IE  115 (309)
Q Consensus       114 ~~  115 (309)
                      ++
T Consensus       115 L~  116 (409)
T PRK12396        115 LS  116 (409)
T ss_pred             Cc
Confidence            85

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=96.67  E-value=0.025  Score=50.61  Aligned_cols=134  Identities=17%  Similarity=0.268  Sum_probs=80.5

Q ss_pred             CCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCC------cceEeee---EeCC--eeEEEEeeCCCCC
Q 021659           50 SHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRH------LLALQGF---STGR--KRLLVFDNIENGS  118 (309)
Q Consensus        50 ~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~n------iv~~~~~---~~~~--~~~lv~e~~~~~s  118 (309)
                      .-..+|+....+|+. ++|+.... ....++..|++.++.|.-..      +...-|-   ..+.  ..+-+++|++|..
T Consensus        37 ~eN~~f~~~~~~g~~-iLki~~~~-~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~l~G~~  114 (331)
T COG2334          37 EENSNFRVQTEDGRY-ILKIYRPG-WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFEYLPGRP  114 (331)
T ss_pred             ccCceEEEEecCCCe-EEEEecCC-CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEEecCCcC
Confidence            457789999877766 88987665 56677888999999884211      2233331   1123  5668899999987


Q ss_pred             HHH-hh------------------cCC---C---CCCCCHHH-------------HHHHHHHHHHHHhhhhhc-----CC
Q 021659          119 LKE-HL------------------NDP---L---KTPLDWKT-------------RLQIAIGVAAALEYLLLF-----SN  155 (309)
Q Consensus       119 L~~-~i------------------~~~---~---~~~l~~~~-------------~~~i~~~i~~~l~~lh~~-----h~  155 (309)
                      +.. ..                  .+-   .   .....|..             .......+...+..+...     ..
T Consensus       115 ~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~~~lp~  194 (331)
T COG2334         115 LERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARLPAHLPA  194 (331)
T ss_pred             cCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhchhhCCc
Confidence            772 11                  000   0   01122220             011222333333333211     23


Q ss_pred             CC--eeecccCCCceeeCCCCc-eeEecccccc
Q 021659          156 LP--MYYVSISSSSIMLDENFT-AKLSDVGFFN  185 (309)
Q Consensus       156 ~~--i~H~dl~p~nill~~~~~-~kl~dfg~~~  185 (309)
                      .+  +||+|+.|.||+++.+.. +.++||+.+.
T Consensus       195 ~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~  227 (331)
T COG2334         195 LGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAG  227 (331)
T ss_pred             ccceeeecCCCccceeEcCCCCeeeEEEccccc
Confidence            34  999999999999998874 8899999764

>PLN02236 choline kinase

Probab=96.64  E-value=0.022  Score=51.45  Aligned_cols=138  Identities=13%  Similarity=0.064  Sum_probs=76.7

Q ss_pred             ccccCCCceEEEEEEcC-----CcEEEEEEeccccccHHHHHHHHHHHccCCCCCc-ceEeeeEeCCeeEEEEeeCCCCC
Q 021659           45 IVYTNSHGAAYKARFQD-----GEVALVKEIQALNLEKDAFYREIQLLGRLHHRHL-LALQGFSTGRKRLLVFDNIENGS  118 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~~-----~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~ni-v~~~~~~~~~~~~lv~e~~~~~s  118 (309)
                      .+..|-...+|++...+     ++.+++|........--.-..|..+++.+..-++ .+++++..+.   .|.+|+++.+
T Consensus        43 ~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~gl~P~~~~~~~~g---~v~efi~g~~  119 (344)
T PLN02236         43 PLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHGQGPRLLGRFPNG---RVEEFIHART  119 (344)
T ss_pred             EcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcCCCCceEEEECCc---eEEEeeCCCC
Confidence            45567888999987532     3578888774332111112568888888853333 3555555333   5788887766


Q ss_pred             HHHh-----------------hcCCC---CC-CCCHHHHHHHHHHH-----------------HHHHhh----hhh-cCC
Q 021659          119 LKEH-----------------LNDPL---KT-PLDWKTRLQIAIGV-----------------AAALEY----LLL-FSN  155 (309)
Q Consensus       119 L~~~-----------------i~~~~---~~-~l~~~~~~~i~~~i-----------------~~~l~~----lh~-~h~  155 (309)
                      +...                 +.+..   .. ...+.+...+..++                 ...+..    +.. .+.
T Consensus       120 l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~~~  199 (344)
T PLN02236        120 LSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDDQE  199 (344)
T ss_pred             CCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccCCC
Confidence            5421                 01100   01 11122222332111                 111111    111 245


Q ss_pred             CCeeecccCCCceeeCC-CCceeEecccccc
Q 021659          156 LPMYYVSISSSSIMLDE-NFTAKLSDVGFFN  185 (309)
Q Consensus       156 ~~i~H~dl~p~nill~~-~~~~kl~dfg~~~  185 (309)
                      ..++|+|+++.||+++. ++.+.++||..+.
T Consensus       200 ~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~  230 (344)
T PLN02236        200 IGFCHNDLQYGNIMIDEETRAITIIDYEYAS  230 (344)
T ss_pred             ceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence            67899999999999976 4679999998653

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=96.45  E-value=0.051  Score=48.27  Aligned_cols=31  Identities=13%  Similarity=0.025  Sum_probs=27.5

Q ss_pred             CCCeeecccCCCceeeCCCCceeEecccccc
Q 021659          155 NLPMYYVSISSSSIMLDENFTAKLSDVGFFN  185 (309)
Q Consensus       155 ~~~i~H~dl~p~nill~~~~~~kl~dfg~~~  185 (309)
                      ..+++|||+.++|+++++++.+.++||..+.
T Consensus       195 ~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~  225 (309)
T TIGR02904       195 RTVLVHGKLSLSHFLYDETRGGYFINFEKAS  225 (309)
T ss_pred             ceeeeCCCCcHHhEEEcCCCCEEEEEhhhcc
Confidence            4589999999999999999899999998654

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=96.34  E-value=0.035  Score=49.84  Aligned_cols=72  Identities=14%  Similarity=0.037  Sum_probs=42.7

Q ss_pred             ccccCCCceEEEEEEcC----CcEEEEEEeccccccHHHHHHHHHHHccCCCCCc-ceEeeeEeCCeeEEEEeeCCCCCH
Q 021659           45 IVYTNSHGAAYKARFQD----GEVALVKEIQALNLEKDAFYREIQLLGRLHHRHL-LALQGFSTGRKRLLVFDNIENGSL  119 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~~----~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~ni-v~~~~~~~~~~~~lv~e~~~~~sL  119 (309)
                      .+..|-...+|+....+    +..|++|........--.-.+|..+++.+..-++ .+++++..++   +|.+|+++.++
T Consensus        21 ~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~gl~P~~l~~~~~G---~i~~fi~g~~l   97 (330)
T PLN02421         21 RISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAAGFGAKLLGVFGNG---MIQSFINARTL   97 (330)
T ss_pred             EeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhcCCCCceeEEeCCc---EeehhhcCCCC
Confidence            45557778899887543    2378888774332111122568888888854333 3455554322   47888877654

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=96.32  E-value=0.015  Score=48.59  Aligned_cols=31  Identities=16%  Similarity=0.286  Sum_probs=21.7

Q ss_pred             CCCeeecccCCCceee-CCCCceeEecccccc
Q 021659          155 NLPMYYVSISSSSIML-DENFTAKLSDVGFFN  185 (309)
Q Consensus       155 ~~~i~H~dl~p~nill-~~~~~~kl~dfg~~~  185 (309)
                      ...++|+|+.|.||++ +.++.++++||..+.
T Consensus       142 ~~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~  173 (211)
T PF01633_consen  142 PLVFCHNDLNPGNILINNKDGEVKLIDFEYAG  173 (211)
T ss_dssp             GEEEE-S--SGGGEEETSSSSCEEE--GTT-E
T ss_pred             CceEeeccCccccEEeccCCCeEEEecHHHHh
Confidence            3578899999999999 888999999998654

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>PRK11768 serine/threonine protein kinase; Provisional

Probab=96.32  E-value=0.13  Score=46.01  Aligned_cols=70  Identities=14%  Similarity=0.173  Sum_probs=44.3

Q ss_pred             CCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCC--Ccce---Eee--e-EeCCeeEEEEeeCCCCC
Q 021659           49 NSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHR--HLLA---LQG--F-STGRKRLLVFDNIENGS  118 (309)
Q Consensus        49 G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~--niv~---~~~--~-~~~~~~~lv~e~~~~~s  118 (309)
                      +.-+.||+...+++..+++|+..........+..|++.+..|...  .++.   .-|  + ..++..+.++++++|..
T Consensus        36 s~eN~vy~v~~~~~~~~vlKv~r~~~~~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~~G~~  113 (325)
T PRK11768         36 SYENRVYQFGDEDGRRVVAKFYRPERWSDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRRGGRA  113 (325)
T ss_pred             cccceEEEEecCCCCEEEEEEcCcccCCHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeeeCCCC
Confidence            345779999887787888997654444566777888888777321  1222   112  1 12355678889988754

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=96.28  E-value=0.027  Score=49.52  Aligned_cols=71  Identities=21%  Similarity=0.256  Sum_probs=45.1

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCC---CCCcceEeeeEe-CCeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLH---HRHLLALQGFST-GRKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~---h~niv~~~~~~~-~~~~~lv~e~~~~~  117 (309)
                      +.++.|..+.+|+.. .+++.+-+|.-.  ......|..|.+-|+.|.   .-.+.+++++.. +...++|+||++.+
T Consensus        23 ~~v~GG~i~~a~~~~-~~~~~~FvK~~~--~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~~   97 (288)
T PF03881_consen   23 EPVSGGDINEAYRLD-TDGGSYFVKVNS--ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEMG   97 (288)
T ss_dssp             EEE--SSSSEEEEEE-TTS-EEEEEEEE--GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred             EecCCCChhheEEEE-CCCccEEEEecC--hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecCC
Confidence            368889999999988 567778888765  333457899999999884   335667777654 35568999999765

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=95.98  E-value=0.0086  Score=55.90  Aligned_cols=68  Identities=22%  Similarity=0.347  Sum_probs=45.6

Q ss_pred             EEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC--CeeEEEEeeCCCCCHHHhhcC
Q 021659           55 YKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG--RKRLLVFDNIENGSLKEHLND  125 (309)
Q Consensus        55 ~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~--~~~~lv~e~~~~~sL~~~i~~  125 (309)
                      +.+...+|+.+ .-=++..+ ....+......++.+.|+|...++++...  ....+|+|++.. ||++....
T Consensus         6 ~~a~~~~~~~c-~nglplt~-~s~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~~~-Sled~~~~   75 (725)
T KOG1093|consen    6 FFAQEKPGDVC-SNGLPLTP-NSIQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHYTM-SLEDILKT   75 (725)
T ss_pred             EehhcCCCccc-cCCCcCCC-cHHHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhhcc-chHHHHHh
Confidence            45555555544 11122222 23345666788999999999999998765  445688899855 99999875

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=95.84  E-value=0.13  Score=45.79  Aligned_cols=33  Identities=6%  Similarity=0.014  Sum_probs=28.6

Q ss_pred             CCCCeeecccCCCceeeCCCCceeEeccccccc
Q 021659          154 SNLPMYYVSISSSSIMLDENFTAKLSDVGFFNS  186 (309)
Q Consensus       154 h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~  186 (309)
                      +...++|||+.+.|++++..+-+=|.||+.+..
T Consensus       196 ~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~l  228 (321)
T COG3173         196 GPPVLVHGDYRPGNLIIDPGRPTGVLDWELATL  228 (321)
T ss_pred             CCceeeeCCcccCCEEEeCCCeeEEEecccccc
Confidence            456899999999999999887888999998754

>PRK06148 hypothetical protein; Provisional

Probab=95.83  E-value=0.13  Score=53.17  Aligned_cols=138  Identities=14%  Similarity=0.105  Sum_probs=76.7

Q ss_pred             ccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCC-------CCCcceEee--eE---e--CC--eeE
Q 021659           45 IVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLH-------HRHLLALQG--FS---T--GR--KRL  108 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~-------h~niv~~~~--~~---~--~~--~~~  108 (309)
                      .|+ |....+|+....+++.+++|+..... .......|...+..|.       -|.++...+  ..   .  ++  ..+
T Consensus        32 ~L~-s~~d~nf~v~~~~g~~yVLKi~~~~~-~~~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G~~~~v  109 (1013)
T PRK06148         32 PLD-GERDLNFRLTTDDGADYILKIVNPSE-PRVESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLASAQDPDGEPRLL  109 (1013)
T ss_pred             ecC-CcCCceEEEEeCCCCeEEEEEcCCcc-chhHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEEeecCCCceEEE
Confidence            453 45688899988778789999876432 3344555666666552       223333221  11   1  12  345


Q ss_pred             EEEeeCCCCCHHHhhc---------------------CC----CCCCCCHH-----------------HHHHHHHHHHHH
Q 021659          109 LVFDNIENGSLKEHLN---------------------DP----LKTPLDWK-----------------TRLQIAIGVAAA  146 (309)
Q Consensus       109 lv~e~~~~~sL~~~i~---------------------~~----~~~~l~~~-----------------~~~~i~~~i~~~  146 (309)
                      .+++|++|..+.+...                     +-    ....+.|.                 ....++.+++..
T Consensus       110 rLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~F~~p~~~r~~~Wdl~~~~~l~~~l~~i~d~~~r~~l~~~~~~  189 (1013)
T PRK06148        110 RLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQGFMHPGALRDLDWDLRHAGRARDRLHFIDDPEDRALVERFLAR  189 (1013)
T ss_pred             EEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccchhhhhhhhhcCCHHHHHHHHHHHHH
Confidence            7899999977765110                     00    01111221                 111222233322


Q ss_pred             Hh-----hhhhcCCCCeeecccCCCceeeCCCC--cee-Eecccccc
Q 021659          147 LE-----YLLLFSNLPMYYVSISSSSIMLDENF--TAK-LSDVGFFN  185 (309)
Q Consensus       147 l~-----~lh~~h~~~i~H~dl~p~nill~~~~--~~k-l~dfg~~~  185 (309)
                      ..     .+ ..-..++||+|+++.||+++.++  .+. |+|||.+.
T Consensus       190 ~~~~v~p~l-~~Lp~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~  235 (1013)
T PRK06148        190 FERNVAPRL-AALPAQVIHNDANDYNILVDADDGERISGLIDFGDAV  235 (1013)
T ss_pred             HHHHHHHHH-hcCCcceECCCCCcccEEEcCCCCcceEEEEECcccc
Confidence            21     11 11245799999999999998775  454 99999764

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=95.80  E-value=0.037  Score=46.32  Aligned_cols=151  Identities=14%  Similarity=0.110  Sum_probs=83.5

Q ss_pred             CCCceEEEEEEcCCcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeCCeeE-EEEeeCCCCCHHHhhcC
Q 021659           49 NSHGAAYKARFQDGEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTGRKRL-LVFDNIENGSLKEHLND  125 (309)
Q Consensus        49 G~~~~v~~~~~~~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~-lv~e~~~~~sL~~~i~~  125 (309)
                      ++.++.-.++.+-|... +|++...+.  ...-|..+..++.++.  .|+++..  ++..-| ++.|.|-....      
T Consensus        73 ~gNsTl~~~kt~iG~L~-lKKi~slp~~~~~~~y~nky~v~Armh--GilrL~N--Dn~~~yGvIlE~Cy~~~i------  141 (308)
T PF07387_consen   73 NGNSTLLIGKTKIGPLF-LKKIRSLPCCINDALYFNKYRVFARMH--GILRLKN--DNNYKYGVILERCYKIKI------  141 (308)
T ss_pred             CCceEEEEeccccchhh-hhhccCCCcccchhhhhhhhhHHHHhh--heeEeec--CCCceeEEEEeeccCccc------
Confidence            44555555554444444 455543333  2345667777776654  2444441  123333 78888844111      


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccccCCCCCCCCCCCCCCC
Q 021659          126 PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYATMPHSSCPEDCSTQ  205 (309)
Q Consensus       126 ~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~PE~~~~~  205 (309)
                           ..   .- ++.--+++|...|+ ...+.+|||.+|+|||-|+.|.+|+.|-+..-  .   .+..|.- +.+.+-
T Consensus       142 -----~~---~N-~i~agi~~L~~fH~-~~~~~lHGD~np~NiM~D~~G~lKlVDP~~Ll--~---~~V~~vN-~~Y~~l  205 (308)
T PF07387_consen  142 -----NF---SN-FITAGIKDLMDFHS-ENQHCLHGDCNPDNIMCDKFGYLKLVDPVCLL--E---NQVNMVN-IEYESL  205 (308)
T ss_pred             -----ch---hH-HHHHhHHHHHHhhc-cCCCeecCCCChhheeecCCCCEEecChhhhh--h---heeeEEe-eecccc
Confidence                 00   01 11222356677765 35679999999999999999999999987421  1   1122222 223333


Q ss_pred             CCCCcEeehhhHHHHHHhCCC
Q 021659          206 DCSNIIFQLGVLILELVTGQS  226 (309)
Q Consensus       206 ~~~~Dv~slG~~l~~l~tg~~  226 (309)
                      +..+.+-+|-..+++++..+.
T Consensus       206 T~~aE~~~fv~s~l~~v~~~~  226 (308)
T PF07387_consen  206 TQEAEVKVFVKSCLKLVEKQR  226 (308)
T ss_pred             ChHHHHHHHHHHHHHHHHHHh
Confidence            555666666556666655443

The function of this family is unknown.

>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []

Probab=94.68  E-value=0.2  Score=43.07  Aligned_cols=77  Identities=17%  Similarity=0.104  Sum_probs=51.6

Q ss_pred             ccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeC-CCCCHHHhh
Q 021659           45 IVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNI-ENGSLKEHL  123 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~-~~~sL~~~i  123 (309)
                      .+..|..+.|+.++..+|..+++|+.........+...+ ..|+..+....+++++.-. ....+++|.+ ++.+|.+..
T Consensus         9 ~~~~g~~s~V~pv~~~dG~~avLKl~~p~~~~~~E~~g~-~~L~~w~G~GaVrll~~d~-~~~AlLLErl~~g~~L~~~~   86 (253)
T PF04655_consen    9 PPAHGSSSLVVPVRRADGTPAVLKLAPPHAEAEHEARGE-AALRWWNGRGAVRLLAADP-ERGALLLERLDPGRSLASLP   86 (253)
T ss_pred             CCCCCcceEEEEEEcCCCCeEEEEecCCcccchhhhhHH-hHhheeCCCCceeeecccc-ccchhhhhhccCCCchhhcc
Confidence            466788999999998899999999875433222222111 4477777777888887553 2345678888 555776554

Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process

>PTZ00384 choline kinase; Provisional

Probab=94.35  E-value=0.52  Score=43.26  Aligned_cols=73  Identities=12%  Similarity=0.126  Sum_probs=41.7

Q ss_pred             ccccCCCceEEEEEEcCC--c-----EEEEEEeccccccHHHHHHHHHHHccCCCCCc-ceEeeeEeCCeeEEEEeeCCC
Q 021659           45 IVYTNSHGAAYKARFQDG--E-----VALVKEIQALNLEKDAFYREIQLLGRLHHRHL-LALQGFSTGRKRLLVFDNIEN  116 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~~~--~-----~va~K~~~~~~~~~~~~~~ei~~l~~l~h~ni-v~~~~~~~~~~~~lv~e~~~~  116 (309)
                      .+..|-.+.+|++...++  .     .|+++.......---.-..|+++++.|...++ .++++...   .+++.||++|
T Consensus        57 ~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~---~g~l~efIeG  133 (383)
T PTZ00384         57 KMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLGDNNFGPKIIGRFG---DFTIQEWVEG  133 (383)
T ss_pred             EeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHHhCCCCCeEEEecC---CEEEEEEecc
Confidence            455687889999976432  1     24444321111000112468888988864444 44555443   2588999988


Q ss_pred             CCHH
Q 021659          117 GSLK  120 (309)
Q Consensus       117 ~sL~  120 (309)
                      .+|.
T Consensus       134 r~l~  137 (383)
T PTZ00384        134 NTMG  137 (383)
T ss_pred             ccCC
Confidence            7654

>PTZ00296 choline kinase; Provisional

Probab=93.73  E-value=0.86  Score=42.68  Aligned_cols=72  Identities=7%  Similarity=0.004  Sum_probs=41.6

Q ss_pred             ccccCCCceEEEEEEcC---------CcEEEEEEeccccccHHHHHHHHHHHccCCCCCcc-eEeeeEeCCeeEEEEeeC
Q 021659           45 IVYTNSHGAAYKARFQD---------GEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLL-ALQGFSTGRKRLLVFDNI  114 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~~---------~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv-~~~~~~~~~~~~lv~e~~  114 (309)
                      .|..|-...+|++...+         ++.|++|+.......--.-..|..+++.+...+|. ++++...   .+.|.+|+
T Consensus       112 ~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lIdR~~E~~v~~~ls~~gi~P~l~~~f~---gg~I~efi  188 (442)
T PTZ00296        112 QILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYNPISEFEVYKTMSKYRIAPQLLNTFS---GGRIEEWL  188 (442)
T ss_pred             EecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeCHHHHHHHHHHHHHCCCCCceEEEeC---CCEEEEee
Confidence            45667778889887542         35788887643221111224577777776433332 4455443   34578998


Q ss_pred             CCCCH
Q 021659          115 ENGSL  119 (309)
Q Consensus       115 ~~~sL  119 (309)
                      +|.+|
T Consensus       189 ~g~~l  193 (442)
T PTZ00296        189 YGDPL  193 (442)
T ss_pred             CCccC
Confidence            87644

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=93.22  E-value=0.0041  Score=64.72  Aligned_cols=151  Identities=13%  Similarity=-0.050  Sum_probs=103.4

Q ss_pred             HHHHHHHHHccCCCCCcceEeeeEe---CCeeEEEEeeCCCCCHHHhhcCCC--CCCCCHHHHHHHHHHHHHHHhhhhhc
Q 021659           79 AFYREIQLLGRLHHRHLLALQGFST---GRKRLLVFDNIENGSLKEHLNDPL--KTPLDWKTRLQIAIGVAAALEYLLLF  153 (309)
Q Consensus        79 ~~~~ei~~l~~l~h~niv~~~~~~~---~~~~~lv~e~~~~~sL~~~i~~~~--~~~l~~~~~~~i~~~i~~~l~~lh~~  153 (309)
                      ....|.+.++...|+++...+.-..   +...+.+++++.+|.+.+.|-++.  .+.+...-+.............+|+.
T Consensus      1275 mll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~ 1354 (2724)
T KOG1826|consen 1275 MLLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSL 1354 (2724)
T ss_pred             hhhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhc
Confidence            3344555556667888877766332   245578889999999999886542  23444444444444435555565543


Q ss_pred             C--CCCeeecccCCCceeeCCCCceeEeccccccccc-------ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHH
Q 021659          154 S--NLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELV  222 (309)
Q Consensus       154 h--~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~  222 (309)
                      .  +.-.+|.++++.|.++..+..++++++|+.+...       ...+++.|++|+....  .+.++|+|..|+-+|...
T Consensus      1355 tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs 1434 (2724)
T KOG1826|consen 1355 TNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRS 1434 (2724)
T ss_pred             ccCCccchhhhhhhhccceecCCcccccccccccccCchHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHh
Confidence            2  4456899999999999999999999999988332       3355666666665433  244599999999999988


Q ss_pred             hCCCCCC
Q 021659          223 TGQSPEE  229 (309)
Q Consensus       223 tg~~p~~  229 (309)
                      -|..+|.
T Consensus      1435 ~~n~~fi 1441 (2724)
T KOG1826|consen 1435 DGNAYFI 1441 (2724)
T ss_pred             cccHHHH
Confidence            8887763

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=92.83  E-value=0.52  Score=42.62  Aligned_cols=53  Identities=15%  Similarity=0.164  Sum_probs=44.2

Q ss_pred             CCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccc
Q 021659          131 LDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNS  186 (309)
Q Consensus       131 l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~  186 (309)
                      -.+.+++.++.+.+..+.-+-  .+-..-|+++.-.||+|+ +|++.|+||-+++.
T Consensus       318 ~~~~e~lsff~s~~sil~~le--kkf~fehrnlt~~niLId-~GnvtLIDfklsRl  370 (488)
T COG5072         318 DRSEEELSFFWSCISILDILE--KKFPFEHRNLTLDNILID-EGNVTLIDFKLSRL  370 (488)
T ss_pred             ccHHHHHHHHHHHHHHHhhhh--hcCCcccccccccceeee-cCceEEEEeeeeec
Confidence            346778888888887777773  356788999999999999 99999999999883

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=92.82  E-value=2.1  Score=36.38  Aligned_cols=73  Identities=19%  Similarity=0.181  Sum_probs=47.6

Q ss_pred             ccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCC---CcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           45 IVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHR---HLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~---niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      .+..|--...|...+ +...+-+|.-.  ......|..|+.-|..|.-.   ++.+++....+ .+.|+|+||++.+++.
T Consensus        23 ~v~gG~inea~~v~d-g~~~~FvK~n~--~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~~d   99 (286)
T COG3001          23 EVSGGDINEAWRLRD-GTDPFFVKCNQ--REQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGPLD   99 (286)
T ss_pred             ccCCccccceeEeec-CCcceEEEecc--hhhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCCCC
Confidence            455566666777664 34566677532  22235688999888888543   44556655433 7889999999886665

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	309
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		3e-21
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		9e-21
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		8e-09
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		1e-08
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		8e-07
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		2e-06
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		3e-06
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		6e-06

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 135/296 (45%), Gaps = 30/296 (10%)
Query: 27  IRRFSYKDIKMATDGF--HRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDA--FYR 82
           ++RFS +++++A+D F    I+     G  YK R  DG +  VK ++    +     F  
Sbjct: 25  LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQT 84
Query: 83  EIXXXXXXXXXXXXXXXXFS-TGRKRLLVFDNIENGSLKEHLNDPLKT--PLDWKTRLQI 139
           E+                F  T  +RLLV+  + NGS+   L +  ++  PLDW  R +I
Sbjct: 85  EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 144
Query: 140 AIGVAAALEYLLLFSNLPMYYVXXXXXXXMLDENFTAKLSDVGFFN-----------SVR 188
           A+G A  L YL    +  + +        +LDE F A + D G              +VR
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 204
Query: 189 NYATMPHSSCPEDCSTQDCSNI--IFQLGVLILELVTGQSP-------EEGDVDLIQWIQ 239
              T+ H + PE  ST   S    +F  GV++LEL+TGQ          + DV L+ W++
Sbjct: 205 --GTIGHIA-PEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 261
Query: 240 EXXXXXXXHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNE 295
                     ++D DL G+Y  +E+++L+ VA LC ++       + ++ R L+ +
Sbjct: 262 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 317

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 97.4 bits (241), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 134/296 (45%), Gaps = 30/296 (10%)
Query: 27  IRRFSYKDIKMATDGF--HRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDA--FYR 82
           ++RFS +++++A+D F    I+     G  YK R  DG +  VK ++    +     F  
Sbjct: 17  LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQT 76
Query: 83  EIXXXXXXXXXXXXXXXXFS-TGRKRLLVFDNIENGSLKEHLNDPLKT--PLDWKTRLQI 139
           E+                F  T  +RLLV+  + NGS+   L +  ++  PLDW  R +I
Sbjct: 77  EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 140 AIGVAAALEYLLLFSNLPMYYVXXXXXXXMLDENFTAKLSDVGFFN-----------SVR 188
           A+G A  L YL    +  + +        +LDE F A + D G              +VR
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 196
Query: 189 NYATMPHSSCPEDCSTQDCSNI--IFQLGVLILELVTGQSP-------EEGDVDLIQWIQ 239
               + H + PE  ST   S    +F  GV++LEL+TGQ          + DV L+ W++
Sbjct: 197 --GXIGHIA-PEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253
Query: 240 EXXXXXXXHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNE 295
                     ++D DL G+Y  +E+++L+ VA LC ++       + ++ R L+ +
Sbjct: 254 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 27/199 (13%)
Query: 108 LLVFDNIENGSLKEHL--NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXX 165
           +L++  +ENG+LK HL  +D     + W+ RL+I IG A  L YL       + +     
Sbjct: 111 ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL---HTRAIIHRDVKS 167
Query: 166 XXXMLDENFTAKLSDVGFFNSVRNYATMPHSSC---------PE---DCSTQDCSNIIFQ 213
              +LDENF  K++D G                         PE        + S+ ++ 
Sbjct: 168 INILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSD-VYS 226
Query: 214 LGVLILELVTGQS------PEEGDVDLIQWIQEXXXXXXXHRMIDPDLGGSYDSKELKKL 267
            GV++ E++  +S      P E  V+L +W  E        +++DP+L      + L+K 
Sbjct: 227 FGVVLFEVLCARSAIVQSLPREM-VNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKF 285
Query: 268 --LAVARLCIKTKDKPTIS 284
              AV  L + ++D+P++ 
Sbjct: 286 GDTAVKCLALSSEDRPSMG 304

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 29/200 (14%)
Query: 108 LLVFDNIENGSLKEHL--NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVXXXX 165
           +L++  +ENG+LK HL  +D     + W+ RL+I IG A  L YL       + +     
Sbjct: 111 ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL---HTRAIIHRDVKS 167
Query: 166 XXXMLDENFTAKLSDVGFFNSVRNY----------ATMPHSSCPE---DCSTQDCSNIIF 212
              +LDENF  K++D G                   T+ +   PE        + S+ ++
Sbjct: 168 INILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID-PEYFIKGRLTEKSD-VY 225
Query: 213 QLGVLILELVTGQS------PEEGDVDLIQWIQEXXXXXXXHRMIDPDLGGSYDSKELKK 266
             GV++ E++  +S      P E  V+L +W  E        +++DP+L      + L+K
Sbjct: 226 SFGVVLFEVLCARSAIVQSLPREM-VNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRK 284
Query: 267 L--LAVARLCIKTKDKPTIS 284
               AV  L + ++D+P++ 
Sbjct: 285 FGDTAVKCLALSSEDRPSMG 304

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 110/286 (38%), Gaps = 33/286 (11%)
Query: 28  RRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLE----KDAFYRE 83
           R  S    KM   GF         G  YK    +  VA+ K    +++     K  F +E
Sbjct: 30  RPISVGGNKMGEGGF---------GVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQE 80
Query: 84  IXXXXXXXXXXXXXXXXFST-GRKRLLVFDNIENGSLKEHLNDPLKTP-LDWKTRLQIAI 141
           I                FS+ G    LV+  + NGSL + L+    TP L W  R +IA 
Sbjct: 81  IKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQ 140
Query: 142 GVAAALEYLLLFSNLPMYYVXXXXXXXMLDENFTAKLSDVGFFNSVRNYATMPHSS---- 197
           G A  + +L    ++   +        +LDE FTAK+SD G   +   +A     S    
Sbjct: 141 GAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVG 197
Query: 198 -----CPEDCSTQ-DCSNIIFQLGVLILELVTG----QSPEEGDVDLIQWIQEXXXXXXX 247
                 PE    +    + I+  GV++LE++TG        E  + L    +        
Sbjct: 198 TTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTI 257
Query: 248 HRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQ 293
              ID  +  + DS  ++ + +VA  C+  K      I ++ + LQ
Sbjct: 258 EDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 109/290 (37%), Gaps = 41/290 (14%)
Query: 28  RRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLE----KDAFYRE 83
           R  S    KM   GF         G  YK    +  VA+ K    +++     K  F +E
Sbjct: 24  RPISVGGNKMGEGGF---------GVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQE 74
Query: 84  IXXXXXXXXXXXXXXXXFST-GRKRLLVFDNIENGSLKEHLNDPLKTP-LDWKTRLQIAI 141
           I                FS+ G    LV+  + NGSL + L+    TP L W  R +IA 
Sbjct: 75  IKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQ 134
Query: 142 GVAAALEYLLLFSNLPMYYVXXXXXXXMLDENFTAKLSDVGFFNSVRNYA---------- 191
           G A  + +L    ++   +        +LDE FTAK+SD G   +   +A          
Sbjct: 135 GAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVG 191
Query: 192 ----TMPHSSCPEDCSTQDCSNIIFQLGVLILELVTG----QSPEEGDVDLIQWIQEXXX 243
                 P +   E     D    I+  GV++LE++TG        E  + L    +    
Sbjct: 192 TTAYMAPEALRGEITPKSD----IYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDE 247
Query: 244 XXXXHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQ 293
                  ID  +  + DS  ++ + +VA  C+  K      I ++ + LQ
Sbjct: 248 EKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 109/290 (37%), Gaps = 41/290 (14%)
Query: 28  RRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLE----KDAFYRE 83
           R  S    KM   GF         G  YK    +  VA+ K    +++     K  F +E
Sbjct: 30  RPISVGGNKMGEGGF---------GVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQE 80
Query: 84  IXXXXXXXXXXXXXXXXFST-GRKRLLVFDNIENGSLKEHLNDPLKTP-LDWKTRLQIAI 141
           I                FS+ G    LV+  + NGSL + L+    TP L W  R +IA 
Sbjct: 81  IKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQ 140
Query: 142 GVAAALEYLLLFSNLPMYYVXXXXXXXMLDENFTAKLSDVGFFNSVRNYATM-------- 193
           G A  + +L    ++   +        +LDE FTAK+SD G   +   +A          
Sbjct: 141 GAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVG 197
Query: 194 ------PHSSCPEDCSTQDCSNIIFQLGVLILELVTG----QSPEEGDVDLIQWIQEXXX 243
                 P +   E     D    I+  GV++LE++TG        E  + L    +    
Sbjct: 198 TTAYMAPEALRGEITPKSD----IYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDE 253
Query: 244 XXXXHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQ 293
                  ID  +  + DS  ++ + +VA  C+  K      I ++ + LQ
Sbjct: 254 EKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 91/219 (41%), Gaps = 27/219 (12%)
Query: 30  FSYKDIKMATDGF-HRIVYTNSH-------GAAYKARFQDGEVALVKEIQALNLE----K 77
           FS+ ++K  T+ F  R +    +       G  YK    +  VA+ K    +++     K
Sbjct: 6   FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 78  DAFYREIXXXXXXXXXXXXXXXXFST-GRKRLLVFDNIENGSLKEHLNDPLKTP-LDWKT 135
             F +EI                FS+ G    LV+    NGSL + L+    TP L W  
Sbjct: 66  QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHX 125
Query: 136 RLQIAIGVAAALEYLLLFSNLPMYYVXXXXXXXMLDENFTAKLSDVGFFNSVRNYATMPH 195
           R +IA G A  + +L    ++   +        +LDE FTAK+SD G   +   +A    
Sbjct: 126 RCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVX 182
Query: 196 SS---------CPEDCSTQ-DCSNIIFQLGVLILELVTG 224
            S          PE    +    + I+  GV++LE++TG
Sbjct: 183 XSRIVGTTAYXAPEALRGEITPKSDIYSFGVVLLEIITG 221

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	309
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-56
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	9e-53
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	2e-47
3soc_A	322	Activin receptor type-2A; structural genomics cons	6e-27
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	3e-20
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	6e-19
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	4e-18
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	4e-17
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-16
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-16
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	3e-16
3q4u_A	301	Activin receptor type-1; structural genomics conso	3e-16
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	4e-16
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	6e-15
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	7e-15
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	1e-14
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	5e-14
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-13
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-13
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	8e-13
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	3e-12
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	4e-12
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	5e-12
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	9e-12
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	1e-11
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	1e-10
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-10
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	1e-10
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	4e-10
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	5e-10
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	1e-09
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	1e-09
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-09
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	1e-09
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	4e-09
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	5e-09
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	6e-09
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	7e-09
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	9e-09
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	1e-08
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-08
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	3e-08
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	3e-08
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	4e-08
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	4e-08
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	5e-08
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	6e-08
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	6e-08
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	8e-08
3pls_A	298	Macrophage-stimulating protein receptor; protein k	8e-08
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	8e-08
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-07
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-07
4aoj_A	329	High affinity nerve growth factor receptor; transf	1e-07
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-07
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	2e-07
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-07
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	2e-07
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-07
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	4e-07
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	4e-07
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	5e-07
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	5e-07
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	8e-07
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	8e-07
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	9e-07
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	3e-06
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	3e-06
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	3e-06
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	4e-06
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	7e-06
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	8e-06
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	9e-06
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-05
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	1e-05
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-05
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	2e-05
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	2e-05
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	2e-05
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	4e-05
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	4e-05
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	5e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-05
3uqc_A	286	Probable conserved transmembrane protein; structur	7e-05
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	9e-05
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-04
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	2e-04
3niz_A	311	Rhodanese family protein; structural genomics, str	3e-04
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	4e-04
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	4e-04
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	4e-04
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	4e-04
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	5e-04
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	5e-04
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	6e-04
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	6e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  184 bits (470), Expect = 1e-56
 Identities = 87/307 (28%), Positives = 150/307 (48%), Gaps = 52/307 (16%)

Query: 27  IRRFSYKDIKMATDGFHR--IVYTNSHGAAYKARFQDGEVALVKEI-----QALNLEKDA 79
           ++RFS +++++A+D F    I+     G  YK R  DG +  VK +     Q   L+   
Sbjct: 17  LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQ--- 73

Query: 80  FYREIQLLGRLHHRHLLALQGF-STGRKRLLVFDNIENGSLKEHL--NDPLKTPLDWKTR 136
           F  E++++    HR+LL L+GF  T  +RLLV+  + NGS+   L      + PLDW  R
Sbjct: 74  FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKR 133

Query: 137 LQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGF--FNSVRN----- 189
            +IA+G A  L YL    +  + +  + +++I+LDE F A + D G       ++     
Sbjct: 134 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT 193

Query: 190 ------------YATMPHSSCPEDCSTQDCSNIIFQLGVLILELVTGQSP-------EEG 230
                       Y +   SS   D         +F  GV++LEL+TGQ          + 
Sbjct: 194 AVRGTIGHIAPEYLSTGKSSEKTD---------VFGYGVMLLELITGQRAFDLARLANDD 244

Query: 231 DVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKT--KDKPTISIPQI 288
           DV L+ W++       +  ++D DL G+Y  +E+++L+ VA LC ++   ++P +S  ++
Sbjct: 245 DVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMS--EV 302

Query: 289 SRYLQNE 295
            R L+ +
Sbjct: 303 VRMLEGD 309

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  174 bits (444), Expect = 9e-53
 Identities = 76/310 (24%), Positives = 131/310 (42%), Gaps = 39/310 (12%)

Query: 19  SRSGPKCFIRRFSYKDIKMATDGFH--RIVYTNSHGAAYKARFQDGEVALVKEIQALNLE 76
           S         R    D++ AT+ F    ++     G  YK   +DG    +K     + +
Sbjct: 18  SSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQ 77

Query: 77  KDA-FYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLKEHL--NDPLKTPLD 132
               F  EI+ L    H HL++L GF     + +L++  +ENG+LK HL  +D     + 
Sbjct: 78  GIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMS 137

Query: 133 WKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYAT 192
           W+ RL+I IG A  L YL       + +  + S +I+LDENF  K++D G          
Sbjct: 138 WEQRLEICIGAARGLHYL---HTRAIIHRDVKSINILLDENFVPKITDFGISKKGTE-LD 193

Query: 193 MPHSS----------CPEDCSTQ------DCSNIIFQLGVLILELVTGQSP-----EEGD 231
             H S           PE           D    ++  GV++ E++  +S          
Sbjct: 194 QTHLSTVVKGTLGYIDPEYFIKGRLTEKSD----VYSFGVVLFEVLCARSAIVQSLPREM 249

Query: 232 VDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKT--KDKPTISIPQIS 289
           V+L +W  ES  +  + +++DP+L      + L+K    A  C+    +D+P++    + 
Sbjct: 250 VNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMG--DVL 307

Query: 290 RYLQNEVDIQ 299
             L+  + +Q
Sbjct: 308 WKLEYALRLQ 317

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  160 bits (406), Expect = 2e-47
 Identities = 77/298 (25%), Positives = 124/298 (41%), Gaps = 56/298 (18%)

Query: 28  RRFSYKDIKMATDGFHRIVYTNSH--------GAAYKARFQDGEVALVKEIQALNLEKDA 79
             FS+ ++K  T+ F     +           G  YK    +  VA VK++ A+      
Sbjct: 13  HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVA-VKKLAAMVDITTE 71

Query: 80  -----FYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLKEHLNDPLKT-PLD 132
                F +EI+++ +  H +L+ L GFS+ G    LV+  + NGSL + L+    T PL 
Sbjct: 72  ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLS 131

Query: 133 WKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGF--------- 183
           W  R +IA G A  + +L         +  I S++I+LDE FTAK+SD G          
Sbjct: 132 WHMRCKIAQGAANGINFL---HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188

Query: 184 -FNSVRNYATMPHSSCPE----------DCSTQDCSNIIFQLGVLILELVTGQSP---EE 229
              + R   T  + + PE          D         I+  GV++LE++TG        
Sbjct: 189 TVMTSRIVGTTAYMA-PEALRGEITPKSD---------IYSFGVVLLEIITGLPAVDEHR 238

Query: 230 GDVDLIQWIQESSISS-SIHRMIDPDLGGSYDSKELKKLLAVARLCIKT--KDKPTIS 284
               L+   +E      +I   ID  +    DS  ++ + +VA  C+      +P I 
Sbjct: 239 EPQLLLDIKEEIEDEEKTIEDYIDKKMND-ADSTSVEAMYSVASQCLHEKKNKRPDIK 295

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  106 bits (267), Expect = 6e-27
 Identities = 54/300 (18%), Positives = 101/300 (33%), Gaps = 52/300 (17%)

Query: 17  HRSRSGPKCFIRRFSYKDIKMATDGFH--RIVYTNSHGAAYKARFQDGEVALVKEIQALN 74
           H   SG          +++   +       +      G  +KA+  +  VA VK     +
Sbjct: 6   HHHSSGV-----DLGTENLYFQSMPLQLLEVKARGRFGCVWKAQLLNEYVA-VKIFPIQD 59

Query: 75  LEKDAFYREIQLLGRLHHRHLLALQGFSTG-----RKRLLVFDNIENGSLKEHLNDPLKT 129
            +      E+  L  + H ++L   G             L+    E GSL + L      
Sbjct: 60  KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLK---AN 116

Query: 130 PLDWKTRLQIAIGVAAALEYL-------LLFSNLPMYYVSISSSSIMLDENFTAKLSDVG 182
            + W     IA  +A  L YL              + +  I S +++L  N TA ++D G
Sbjct: 117 VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFG 176

Query: 183 F---FNSVRNYATMPHSSC-------PE----DCSTQDCSNI---IFQLGVLILELVTGQ 225
               F + ++     H          PE      + Q  + +   ++ +G+++ EL +  
Sbjct: 177 LALKFEAGKSAGDT-HGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRC 235

Query: 226 SPEEGDVD--LIQWIQESSISSSIHRM--------IDPDLGGSYDSKE-LKKLLAVARLC 274
           +  +G VD  ++ + +E     S+  M          P L   +     +  L      C
Sbjct: 236 TAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEEC 295

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 86.9 bits (216), Expect = 3e-20
 Identities = 46/202 (22%), Positives = 85/202 (42%), Gaps = 21/202 (10%)

Query: 42  FHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDA---FYREIQLLGRLHHRHLLAL 98
           F   +  N  G  +K R+Q  ++  VK ++  +        F  E   L    H ++L +
Sbjct: 14  FLTKLNENHSGELWKGRWQGNDIV-VKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPV 72

Query: 99  QGFST---GRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYL-LLFS 154
            G           L+   +  GSL   L++     +D    ++ A+ +A  + +L  L  
Sbjct: 73  LGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEP 132

Query: 155 NLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYATM--PH-------SSCPEDCSTQ 205
            +P +   ++S S+M+DE+ TA++S      S ++   M  P           PED + +
Sbjct: 133 LIPRHA--LNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRR 190

Query: 206 DCSNIIFQLGVLILELVTGQSP 227
                ++   VL+ ELVT + P
Sbjct: 191 SAD--MWSFAVLLWELVTREVP 210

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 84.3 bits (209), Expect = 6e-19
 Identities = 39/189 (20%), Positives = 81/189 (42%), Gaps = 17/189 (8%)

Query: 50  SHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLL 109
           + G   KA+++  +VA +K+I++ +  K  F  E++ L R++H +++ L G        L
Sbjct: 20  AFGVVCKAKWRAKDVA-IKQIESESERKA-FIVELRQLSRVNHPNIVKLYGACL-NPVCL 76

Query: 110 VFDNIENGSLKEHLNDPLKTP-LDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSI 168
           V +  E GSL   L+     P       +   +  +  + YL       + +  +   ++
Sbjct: 77  VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNL 136

Query: 169 MLDENFT-AKLSDVGFFNSVRNYATMPHSSC-------PEDCSTQDCSNI--IFQLGVLI 218
           +L    T  K+ D   F +  +  T   ++        PE     + S    +F  G+++
Sbjct: 137 LLVAGGTVLKICD---FGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIIL 193

Query: 219 LELVTGQSP 227
            E++T + P
Sbjct: 194 WEVITRRKP 202

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 82.0 bits (203), Expect = 4e-18
 Identities = 48/195 (24%), Positives = 88/195 (45%), Gaps = 16/195 (8%)

Query: 50  SHGAAYKARFQDGEVALVKEIQALNLEKD---AFYREIQLLGRLHHRHLLALQGFSTGRK 106
           S G  ++A +   +VA VK +   +   +    F RE+ ++ RL H +++   G  T   
Sbjct: 49  SFGTVHRAEWHGSDVA-VKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP 107

Query: 107 RL-LVFDNIENGSLKEHLNDP-LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSIS 164
            L +V + +  GSL   L+    +  LD + RL +A  VA  + Y L   N P+ + ++ 
Sbjct: 108 NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNY-LHNRNPPIVHRNLK 166

Query: 165 SSSIMLDENFTAKLSDVGFFNSVRNYATMPHSSC-------PEDCSTQDCSNI--IFQLG 215
           S ++++D+ +T K+ D G      +      S+        PE    +  +    ++  G
Sbjct: 167 SPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFG 226

Query: 216 VLILELVTGQSPEEG 230
           V++ EL T Q P   
Sbjct: 227 VILWELATLQQPWGN 241

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 79.3 bits (196), Expect = 4e-17
 Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 27/147 (18%)

Query: 50  SHGAAYKARF-QDGEVALVKEIQALNLE-KDAFYREIQLLGRLHHRHLLALQGFSTGRKR 107
             G A K    + GEV ++KE+   + E +  F +E++++  L H ++L   G     KR
Sbjct: 22  CFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKR 81

Query: 108 L-LVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSS 166
           L  + + I+ G+L+  +     +   W  R+  A  +A+ + YL              S 
Sbjct: 82  LNFITEYIKGGTLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYL-------------HSM 127

Query: 167 SIM----------LDENFTAKLSDVGF 183
           +I+          + EN    ++D G 
Sbjct: 128 NIIHRDLNSHNCLVRENKNVVVADFGL 154

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 78.0 bits (192), Expect = 1e-16
 Identities = 47/277 (16%), Positives = 87/277 (31%), Gaps = 58/277 (20%)

Query: 50  SHGAAYKARFQDGEVALVKEIQALNLEKDAFYRE--IQLLGRLHHRHLLALQGFSTG--- 104
            +GA YK    +  VA VK        +  F  E  I  +  + H ++            
Sbjct: 25  RYGAVYKGSLDERPVA-VKVFSFA--NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTA 81

Query: 105 ---RKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYL------LLFSN 155
               + LLV +   NGSL ++L+       DW +  ++A  V   L YL           
Sbjct: 82  DGRMEYLLVMEYYPNGSLXKYLS---LHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYK 138

Query: 156 LPMYYVSISSSSIMLDENFTAKLSDVGF---FNSVRNYATMPHSSC------------PE 200
             + +  ++S ++++  + T  +SD G        R        +             PE
Sbjct: 139 PAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPE 198

Query: 201 ---------DCSTQDCSNIIFQLGVLILELVTGQSPEE--GDVDLIQ--WIQESSISSSI 247
                    D  +      ++ LG++  E+    +       V   Q  +  E     + 
Sbjct: 199 VLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTF 258

Query: 248 HRMID--------PDLGGSY--DSKELKKLLAVARLC 274
             M          P    ++  +S  ++ L      C
Sbjct: 259 EDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDC 295

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 77.9 bits (192), Expect = 2e-16
 Identities = 35/175 (20%), Positives = 69/175 (39%), Gaps = 19/175 (10%)

Query: 19  SRSGPKCFIRRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKD 78
           S SG    ++R   + I          +     G  ++ +++  EVA VK   +      
Sbjct: 28  SGSGLPLLVQRTIARTIV-----LQESIGKGRFGEVWRGKWRGEEVA-VKIFSSREERSW 81

Query: 79  AFYREIQLLGRLHHRHLLALQGFSTGRKRL-----LVFDNIENGSLKEHLNDPLKTPLDW 133
               EI     L H ++L                 LV D  E+GSL ++LN   +  +  
Sbjct: 82  FREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTV 138

Query: 134 KTRLQIAIGVAAALEYL-----LLFSNLPMYYVSISSSSIMLDENFTAKLSDVGF 183
           +  +++A+  A+ L +L            + +  + S +I++ +N T  ++D+G 
Sbjct: 139 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 193

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 77.1 bits (190), Expect = 3e-16
 Identities = 39/175 (22%), Positives = 73/175 (41%), Gaps = 19/175 (10%)

Query: 19  SRSGPKCFIRRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKD 78
           S SG    ++R   K I+       + +    +G  +  +++  +VA VK          
Sbjct: 23  SGSGLPLLVQRTIAKQIQ-----MVKQIGKGRYGEVWMGKWRGEKVA-VKVFFTTEEASW 76

Query: 79  AFYREIQLLGRLHHRHLLAL-----QGFSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDW 133
               EI     + H ++L       +G  +  +  L+ D  ENGSL ++L     T LD 
Sbjct: 77  FRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLK---STTLDA 133

Query: 134 KTRLQIAIGVAAALEYLLLFSNLPMYYVSIS-----SSSIMLDENFTAKLSDVGF 183
           K+ L++A    + L +L           +I+     S +I++ +N T  ++D+G 
Sbjct: 134 KSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 188

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 76.6 bits (189), Expect = 3e-16
 Identities = 30/144 (20%), Positives = 59/144 (40%), Gaps = 14/144 (9%)

Query: 50  SHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRL- 108
            +G  ++  +Q   VA VK   + + +      E+     L H ++L         +   
Sbjct: 20  RYGEVWRGSWQGENVA-VKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSS 78

Query: 109 ----LVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSI- 163
               L+    E GSL ++L     T LD  + L+I + +A+ L +L +         +I 
Sbjct: 79  TQLWLITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIA 135

Query: 164 ----SSSSIMLDENFTAKLSDVGF 183
                S +I++ +N    ++D+G 
Sbjct: 136 HRDLKSKNILVKKNGQCCIADLGL 159

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 72.7 bits (179), Expect = 6e-15
 Identities = 51/207 (24%), Positives = 82/207 (39%), Gaps = 41/207 (19%)

Query: 50  SHGAAYKARFQDGEVALVKEIQALNLEKD---AFYREIQLLGRLHHRHLLALQGFSTGRK 106
           S G  YK ++  G+VA VK +           AF  E+ +L +  H ++L   G+ST  +
Sbjct: 36  SFGTVYKGKW-HGDVA-VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQ 93

Query: 107 RLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYL---------LLFSNLP 157
             +V    E  SL  HL+   +T  + K  + IA   A  ++YL         L      
Sbjct: 94  LAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAKSIIHRDL------ 146

Query: 158 MYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYATMPHSSC---------PEDCSTQDCS 208
                  S++I L E+ T K+ D G       ++                PE    QD +
Sbjct: 147 ------KSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200

Query: 209 NI-----IFQLGVLILELVTGQSPEEG 230
                  ++  G+++ EL+TGQ P   
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLPYSN 227

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 72.3 bits (178), Expect = 7e-15
 Identities = 49/206 (23%), Positives = 84/206 (40%), Gaps = 33/206 (16%)

Query: 50  SHGAAYKARFQDGEVALVKEIQALNLEKDA-----FYREIQLLGRLHHRHLLALQGFSTG 104
             G  Y+A +   EVA VK  +    E  +       +E +L   L H +++AL+G    
Sbjct: 19  GFGKVYRAFWIGDEVA-VKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLK 77

Query: 105 RKRL-LVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSI 163
              L LV +    G L   L+      +     +  A+ +A  + YL   + +P+ +  +
Sbjct: 78  EPNLCLVMEFARGGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDL 134

Query: 164 SSSSIMLDE--------NFTAKLSDVGF---------FNSVRNYATMPHSSCPEDCSTQD 206
            SS+I++ +        N   K++D G           ++   YA M     PE      
Sbjct: 135 KSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMA----PEVIRASM 190

Query: 207 CSNI--IFQLGVLILELVTGQSPEEG 230
            S    ++  GVL+ EL+TG+ P  G
Sbjct: 191 FSKGSDVWSYGVLLWELLTGEVPFRG 216

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 72.0 bits (177), Expect = 1e-14
 Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 13/111 (11%)

Query: 50  SHGAAYKARF--QDGEVALVKEIQALNLEKDA--------FYREIQLLGRLHHRHLLALQ 99
             G  +K R       VA +K +   + E +         F RE+ ++  L+H +++ L 
Sbjct: 31  GFGLVHKGRLVKDKSVVA-IKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLY 89

Query: 100 GFSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYL 150
           G        +V + +  G L   L D    P+ W  +L++ + +A  +EY+
Sbjct: 90  GLMH-NPPRMVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYM 138

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 69.3 bits (170), Expect = 1e-13
 Identities = 50/283 (17%), Positives = 88/283 (31%), Gaps = 66/283 (23%)

Query: 50  SHGAAYKARFQDGEVALVKEIQALNLEKD---AFYREIQLLGRLHHRHLLALQGFSTGRK 106
             G  Y  R+  GEVA ++ I      +D   AF RE+    +  H +++   G      
Sbjct: 45  RFGQVYHGRW-HGEVA-IRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP 102

Query: 107 RL-LVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYL---------LLFSNL 156
            L ++    +  +L   + D  K  LD     QIA  +   + YL         L   N+
Sbjct: 103 HLAIITSLCKGRTLYSVVRDA-KIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNV 161

Query: 157 PMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYATMPHSSC------------PEDCST 204
                          +N    ++D G F+                         PE    
Sbjct: 162 -------------FYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQ 208

Query: 205 QDCSNI-----------IFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDP 253
                            +F LG +  EL   + P +            +I   +   + P
Sbjct: 209 LSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKT-------QPAEAIIWQMGTGMKP 261

Query: 254 DLGGSYDSKELKKLLAVARLCIKT--KDKPTISIPQISRYLQN 294
           +L      KE+  +L     C     +++PT +  ++   L+ 
Sbjct: 262 NLSQIGMGKEISDIL---LFCWAFEQEERPTFT--KLMDMLEK 299

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 69.0 bits (169), Expect = 2e-13
 Identities = 57/267 (21%), Positives = 109/267 (40%), Gaps = 38/267 (14%)

Query: 50  SHGAAYKAR-FQDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQG-FSTG 104
           S G A   +  +DG   ++KEI    +   E++   RE+ +L  + H +++  +  F   
Sbjct: 36  SFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEEN 95

Query: 105 RKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSIS 164
               +V D  E G L + +N            L   + +  AL+++    +  + +  I 
Sbjct: 96  GSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV---HDRKILHRDIK 152

Query: 165 SSSIMLDENFTAKLSDVGF---FNSVRNYAT----MPHSSCPEDCSTQ--DCSNIIFQLG 215
           S +I L ++ T +L D G     NS    A      P+   PE C  +  +  + I+ LG
Sbjct: 153 SQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALG 212

Query: 216 VLILELVTGQSPEEGD--VDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARL 273
            ++ EL T +   E     +L+  I   S          P +   Y S +L+ L+     
Sbjct: 213 CVLYELCTLKHAFEAGSMKNLVLKIISGSF---------PPVSLHY-SYDLRSLV---SQ 259

Query: 274 CIKT--KDKPTIS----IPQISRYLQN 294
             K   +D+P+++       I++ ++ 
Sbjct: 260 LFKRNPRDRPSVNSILEKGFIAKRIEK 286

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 67.4 bits (165), Expect = 8e-13
 Identities = 24/134 (17%), Positives = 57/134 (42%), Gaps = 9/134 (6%)

Query: 52  GAAYKARFQD-GEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLV 110
           G  + A +    +VA VK ++  ++  +AF  E  ++  L H  L+ L    T     ++
Sbjct: 202 GEVWMATYNKHTKVA-VKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYII 260

Query: 111 FDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYV--SISSSSI 168
            + +  GSL + L     +       +  +  +A  + ++         Y+   + +++I
Sbjct: 261 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ-----RNYIHRDLRAANI 315

Query: 169 MLDENFTAKLSDVG 182
           ++  +   K++D G
Sbjct: 316 LVSASLVCKIADFG 329

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 64.9 bits (159), Expect = 3e-12
 Identities = 31/134 (23%), Positives = 63/134 (47%), Gaps = 9/134 (6%)

Query: 52  GAAYKARFQD-GEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLV 110
           G  +   +    +VA VK ++  ++  DAF  E  L+ +L H+ L+ L    T     ++
Sbjct: 27  GEVWMGYYNGHTKVA-VKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYII 85

Query: 111 FDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYV--SISSSSI 168
            + +ENGSL + L  P    L     L +A  +A  + ++         Y+   + +++I
Sbjct: 86  TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE-----RNYIHRDLRAANI 140

Query: 169 MLDENFTAKLSDVG 182
           ++ +  + K++D G
Sbjct: 141 LVSDTLSCKIADFG 154

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 65.5 bits (160), Expect = 4e-12
 Identities = 30/134 (22%), Positives = 61/134 (45%), Gaps = 9/134 (6%)

Query: 52  GAAYKARFQD-GEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLV 110
           G  +   +     VA +K ++   +  +AF +E Q++ +L H  L+ L    +     +V
Sbjct: 198 GEVWMGTWNGTTRVA-IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIV 256

Query: 111 FDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYV--SISSSSI 168
            + +  GSL + L       L     + +A  +A+ + Y+       M YV   + +++I
Sbjct: 257 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER-----MNYVHRDLRAANI 311

Query: 169 MLDENFTAKLSDVG 182
           ++ EN   K++D G
Sbjct: 312 LVGENLVCKVADFG 325

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 65.3 bits (159), Expect = 5e-12
 Identities = 30/134 (22%), Positives = 61/134 (45%), Gaps = 9/134 (6%)

Query: 52  GAAYKARFQD-GEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLV 110
           G  +   +     VA +K ++   +  +AF +E Q++ +L H  L+ L    +     +V
Sbjct: 281 GEVWMGTWNGTTRVA-IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIV 339

Query: 111 FDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYV--SISSSSI 168
            + +  GSL + L       L     + +A  +A+ + Y+       M YV   + +++I
Sbjct: 340 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER-----MNYVHRDLRAANI 394

Query: 169 MLDENFTAKLSDVG 182
           ++ EN   K++D G
Sbjct: 395 LVGENLVCKVADFG 408

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 63.4 bits (155), Expect = 9e-12
 Identities = 57/272 (20%), Positives = 102/272 (37%), Gaps = 37/272 (13%)

Query: 50  SHGAAYKAR-FQDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGF---S 102
           S+G   K R   DG++ + KE+   ++   EK     E+ LL  L H +++         
Sbjct: 18  SYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR 77

Query: 103 TGRKRLLVFDNIENGSLKEHLNDPLK--TPLDWKTRLQIAIGVAAALEYLLLFSNLPMYY 160
           T     +V +  E G L   +    K    LD +  L++   +  AL+     S+     
Sbjct: 78  TNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTV 137

Query: 161 V--SISSSSIMLDENFTAKLSDVGF---FNSVRNYAT----MPHSSCPEDCSTQ--DCSN 209
           +   +  +++ LD     KL D G     N   ++A      P+   PE  +    +  +
Sbjct: 138 LHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKS 197

Query: 210 IIFQLGVLILELVTGQSPEEGD--VDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL 267
            I+ LG L+ EL     P       +L   I+E              +   Y S EL ++
Sbjct: 198 DIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF---------RRIPYRY-SDELNEI 247

Query: 268 LAVARLCIKTKDKPTIS----IPQISRYLQNE 295
           +    L +K   +P++      P I  +  + 
Sbjct: 248 IT-RMLNLKDYHRPSVEEILENPLILEHHHHH 278

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 63.6 bits (155), Expect = 1e-11
 Identities = 28/136 (20%), Positives = 67/136 (49%), Gaps = 11/136 (8%)

Query: 52  GAAYKARFQDGE--VALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRL- 108
           G  Y+  ++     VA VK ++   +E + F +E  ++  + H +L+ L G  T      
Sbjct: 234 GEVYEGVWKKYSLTVA-VKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 292

Query: 109 LVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYV--SISSS 166
           ++ + +  G+L ++L +  +  +     L +A  +++A+EYL         ++  ++++ 
Sbjct: 293 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK-----KNFIHRNLAAR 347

Query: 167 SIMLDENFTAKLSDVG 182
           + ++ EN   K++D G
Sbjct: 348 NCLVGENHLVKVADFG 363

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 60.3 bits (147), Expect = 1e-10
 Identities = 28/136 (20%), Positives = 66/136 (48%), Gaps = 11/136 (8%)

Query: 52  GAAYKARFQDGE--VALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRL 108
           G  Y+  ++     VA VK ++   +E + F +E  ++  + H +L+ L G  T      
Sbjct: 27  GEVYEGVWKKYSLTVA-VKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85

Query: 109 LVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYV--SISSS 166
           ++ + +  G+L ++L +  +  +     L +A  +++A+EYL         ++   +++ 
Sbjct: 86  IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL---EK--KNFIHRDLAAR 140

Query: 167 SIMLDENFTAKLSDVG 182
           + ++ EN   K++D G
Sbjct: 141 NCLVGENHLVKVADFG 156

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 60.4 bits (147), Expect = 1e-10
 Identities = 55/265 (20%), Positives = 104/265 (39%), Gaps = 52/265 (19%)

Query: 50  SHGAAYKAR-FQDGEVALVKEIQALNL----EKDAFYREIQLLGRLHHRHLLALQGFSTG 104
                Y+A    DG    +K++Q  +L     +    +EI LL +L+H +++        
Sbjct: 44  QFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE 103

Query: 105 RKRL-LVFDNIENGSLKEHLND--PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYV 161
              L +V +  + G L   +      K  +  +T  +  + + +ALE++           
Sbjct: 104 DNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---------- 153

Query: 162 S-------ISSSSIMLDENFTAKLSDVGF---FNSVRNYA-TM---PHSSCPEDCSTQDC 207
           S       I  +++ +      KL D+G    F+S    A ++   P+   PE       
Sbjct: 154 SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGY 213

Query: 208 SNI--IFQLGVLILELVTGQSPEEGD----VDLIQWIQESSISSSIHRMIDPDLGGSYDS 261
           +    I+ LG L+ E+   QSP  GD      L + I++            P     Y S
Sbjct: 214 NFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD--------YPPLPSDHY-S 264

Query: 262 KELKKLLAVARLCIKT--KDKPTIS 284
           +EL++L+    +CI    + +P ++
Sbjct: 265 EELRQLV---NMCINPDPEKRPDVT 286

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 60.4 bits (147), Expect = 1e-10
 Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 11/135 (8%)

Query: 52  GAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLL-- 109
           G      ++  +VA VK I+     +  F  E  ++ +L H +L+ L G     K  L  
Sbjct: 207 GDVMLGDYRGNKVA-VKCIKNDATAQA-FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 264

Query: 110 VFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYV--SISSSS 167
           V + +  GSL ++L    ++ L     L+ ++ V  A+EYL         +V   +++ +
Sbjct: 265 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL---EG--NNFVHRDLAARN 319

Query: 168 IMLDENFTAKLSDVG 182
           +++ E+  AK+SD G
Sbjct: 320 VLVSEDNVAKVSDFG 334

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 58.4 bits (142), Expect = 4e-10
 Identities = 33/144 (22%), Positives = 60/144 (41%), Gaps = 27/144 (18%)

Query: 52  GAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLL-- 109
           G      ++  +VA VK I+     +  F  E  ++ +L H +L+ L G     K  L  
Sbjct: 35  GDVMLGDYRGNKVA-VKCIKNDATAQA-FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 92

Query: 110 VFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSS-- 167
           V + +  GSL ++L    ++ L     L+ ++ V  A+EYL               ++  
Sbjct: 93  VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL-------------EGNNFV 139

Query: 168 --------IMLDENFTAKLSDVGF 183
                   +++ E+  AK+SD G 
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGL 163

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 58.0 bits (141), Expect = 5e-10
 Identities = 28/135 (20%), Positives = 66/135 (48%), Gaps = 11/135 (8%)

Query: 52  GAAYKARFQDG-EVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRK-RLL 109
           G     +++   +VA +K I+  ++ +D F  E +++  L H  L+ L G  T ++   +
Sbjct: 38  GVVKYGKWRGQYDVA-IKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 96

Query: 110 VFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYV--SISSSS 167
           + + + NG L  +L +  +     +  L++   V  A+EYL    +    ++   +++ +
Sbjct: 97  ITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYL---ES--KQFLHRDLAARN 150

Query: 168 IMLDENFTAKLSDVG 182
            ++++    K+SD G
Sbjct: 151 CLVNDQGVVKVSDFG 165

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 57.2 bits (139), Expect = 1e-09
 Identities = 29/135 (21%), Positives = 62/135 (45%), Gaps = 11/135 (8%)

Query: 52  GAAYKARFQD-GEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRK-RLL 109
           G  +   + +  +VA +K I+   + ++ F  E +++ +L H  L+ L G    +    L
Sbjct: 22  GLVHLGYWLNKDKVA-IKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICL 80

Query: 110 VFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYV--SISSSS 167
           V + +E+G L ++L    +     +T L + + V   + YL          +   +++ +
Sbjct: 81  VTEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEE-----ACVIHRDLAARN 134

Query: 168 IMLDENFTAKLSDVG 182
            ++ EN   K+SD G
Sbjct: 135 CLVGENQVIKVSDFG 149

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 56.8 bits (138), Expect = 1e-09
 Identities = 29/135 (21%), Positives = 62/135 (45%), Gaps = 11/135 (8%)

Query: 52  GAAYKARFQDG-EVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLL 109
           G     +++   +VA VK I+  ++ +D F++E Q + +L H  L+   G  +      +
Sbjct: 22  GVVKLGKWKGQYDVA-VKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYI 80

Query: 110 VFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYV--SISSSS 167
           V + I NG L  +L       L+    L++   V   + +L    +    ++   +++ +
Sbjct: 81  VTEYISNGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFL---ES--HQFIHRDLAARN 134

Query: 168 IMLDENFTAKLSDVG 182
            ++D +   K+SD G
Sbjct: 135 CLVDRDLCVKVSDFG 149

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 56.9 bits (138), Expect = 1e-09
 Identities = 45/268 (16%), Positives = 88/268 (32%), Gaps = 60/268 (22%)

Query: 50  SHGAAYKAR-FQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRL 108
             G  +KA+   DG+  ++K +       +   RE++ L +L H +++   G   G    
Sbjct: 23  GFGQVFKAKHRIDGKTYVIKRV---KYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYD 79

Query: 109 LVFDNI-----------------ENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLL 151
               +                  + G+L++ +       LD    L++   +   ++Y+ 
Sbjct: 80  PETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH 139

Query: 152 LFSNLPMYYVS-------ISSSSIMLDENFTAKLSDVGF---FNSVRNYATM---PHSSC 198
                     S       +  S+I L +    K+ D G      +               
Sbjct: 140 ----------SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMS 189

Query: 199 PEDCSTQ--DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLG 256
           PE  S+Q       ++ LG+++ EL+               +++  IS            
Sbjct: 190 PEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIF--------- 240

Query: 257 GSYDSKELKKLLAVARLCIKTKDKPTIS 284
                K+ K LL    L  K +D+P  S
Sbjct: 241 ----DKKEKTLLQ-KLLSKKPEDRPNTS 263

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 57.7 bits (140), Expect = 1e-09
 Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 12/132 (9%)

Query: 56  KARFQDGEVALVKEI--QALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRK-RLLVFD 112
           + R  +  VA VK          K  F +E ++L +  H +++ L G  T ++   +V +
Sbjct: 134 RLRADNTLVA-VKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192

Query: 113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYV--SISSSSIML 170
            ++ G     L       L  KT LQ+    AA +EYL          +   +++ + ++
Sbjct: 193 LVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLES-----KCCIHRDLAARNCLV 246

Query: 171 DENFTAKLSDVG 182
            E    K+SD G
Sbjct: 247 TEKNVLKISDFG 258

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 55.8 bits (135), Expect = 4e-09
 Identities = 28/119 (23%), Positives = 56/119 (47%), Gaps = 16/119 (13%)

Query: 76  EKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLKEHL--------NDP 126
           E+  F  E  ++   +  H++ L G  + G+  L++ + +  G LK +L        N+P
Sbjct: 71  ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP 130

Query: 127 LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYV--SISSSSIMLDENFTAKLSDVGF 183
           +  P      +Q+A  +A  + YL   +     +V   +++ + M+ E+FT K+ D G 
Sbjct: 131 VLAPPSLSKMIQMAGEIADGMAYL---NA--NKFVHRDLAARNCMVAEDFTVKIGDFGM 184

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 55.3 bits (134), Expect = 5e-09
 Identities = 30/140 (21%), Positives = 55/140 (39%), Gaps = 16/140 (11%)

Query: 52  GAAYKARFQDGE-----VALVKEIQ--ALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG 104
           G  Y+  + + +     VA VK  +       K+ F  E  ++  L H H++ L G    
Sbjct: 26  GEVYEGVYTNHKGEKINVA-VKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE 84

Query: 105 RKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYV--S 162
               ++ +    G L  +L    K  L   T +  ++ +  A+ YL    +  +  V   
Sbjct: 85  EPTWIIMELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYL---ES--INCVHRD 138

Query: 163 ISSSSIMLDENFTAKLSDVG 182
           I+  +I++      KL D G
Sbjct: 139 IAVRNILVASPECVKLGDFG 158

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 54.9 bits (133), Expect = 6e-09
 Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 8/109 (7%)

Query: 76  EKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKT 135
            ++ F +E   + +  H H++ L G  T     ++ +    G L+  L    K  LD  +
Sbjct: 59  VREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVR-KYSLDLAS 117

Query: 136 RLQIAIGVAAALEYLLLFSNLPMYYV--SISSSSIMLDENFTAKLSDVG 182
            +  A  ++ AL YL    +    +V   I++ ++++  N   KL D G
Sbjct: 118 LILYAYQLSTALAYL---ES--KRFVHRDIAARNVLVSSNDCVKLGDFG 161

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 54.9 bits (133), Expect = 7e-09
 Identities = 26/132 (19%), Positives = 59/132 (44%), Gaps = 11/132 (8%)

Query: 55  YKARFQDGEVALVKEIQ--ALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFD 112
           Y+ R +  +VA +K ++      + +   RE Q++ +L + +++ L G       +LV +
Sbjct: 31  YRMRKKQIDVA-IKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVME 89

Query: 113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYV--SISSSSIML 170
               G L + L    +  +      ++   V+  ++YL         +V   +++ +++L
Sbjct: 90  MAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYL---EE--KNFVHRDLAARNVLL 143

Query: 171 DENFTAKLSDVG 182
                AK+SD G
Sbjct: 144 VNRHYAKISDFG 155

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 54.6 bits (132), Expect = 9e-09
 Identities = 26/110 (23%), Positives = 59/110 (53%), Gaps = 9/110 (8%)

Query: 76  EKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLKEHLNDPLKTPLDWK 134
           ++  F  E  ++G+  H +++ L+G  +  +  +++ + +ENG+L + L +         
Sbjct: 89  QRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREK-DGEFSVL 147

Query: 135 TRLQIAIGVAAALEYLLLFSNLPMYYV--SISSSSIMLDENFTAKLSDVG 182
             + +  G+AA ++YL   +N  M YV   +++ +I+++ N   K+SD G
Sbjct: 148 QLVGMLRGIAAGMKYL---AN--MNYVHRDLAARNILVNSNLVCKVSDFG 192

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 54.6 bits (131), Expect = 1e-08
 Identities = 26/132 (19%), Positives = 60/132 (45%), Gaps = 11/132 (8%)

Query: 55  YKARFQDGEVALVKEIQ--ALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFD 112
           Y+ R +  +VA +K ++      + +   RE Q++ +L + +++ L G       +LV +
Sbjct: 357 YRMRKKQIDVA-IKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVME 415

Query: 113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYV--SISSSSIML 170
               G L + L    +  +      ++   V+  ++YL         +V  ++++ +++L
Sbjct: 416 MAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYL---EE--KNFVHRNLAARNVLL 469

Query: 171 DENFTAKLSDVG 182
                AK+SD G
Sbjct: 470 VNRHYAKISDFG 481

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 53.4 bits (129), Expect = 2e-08
 Identities = 27/161 (16%), Positives = 55/161 (34%), Gaps = 42/161 (26%)

Query: 46  VYTNSHGAAYKARFQDGEVAL--VKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFST 103
           V     G   +      +VA+  +K   +   E + F  E   +    H +++ L G   
Sbjct: 50  VM---EGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI 106

Query: 104 ------GRKRLLVFDNIENGSLKEHL----NDPLKTPLDWKTRLQIAIGVAAALEYLLLF 153
                   K +++   ++ G L  +L     +     +  +T L+  + +A  +EYL   
Sbjct: 107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL--- 163

Query: 154 SNLPMYYVSISSSS------------IMLDENFTAKLSDVG 182
                       S+             ML ++ T  ++D G
Sbjct: 164 ------------SNRNFLHRDLAARNCMLRDDMTVCVADFG 192

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 53.5 bits (129), Expect = 3e-08
 Identities = 28/110 (25%), Positives = 57/110 (51%), Gaps = 9/110 (8%)

Query: 76  EKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLKEHLNDPLKTPLDWK 134
           ++  F  E  ++G+  H +++ L+G  T  +  ++V + +ENGSL   L           
Sbjct: 89  QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVI 147

Query: 135 TRLQIAIGVAAALEYLLLFSNLPMYYV--SISSSSIMLDENFTAKLSDVG 182
             + +  G+A+ ++YL   S+  M YV   +++ +I+++ N   K+SD G
Sbjct: 148 QLVGMLRGIASGMKYL---SD--MGYVHRDLAARNILINSNLVCKVSDFG 192

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 53.1 bits (128), Expect = 3e-08
 Identities = 37/248 (14%), Positives = 81/248 (32%), Gaps = 39/248 (15%)

Query: 52  GAAYKAR-FQDGEVALVKEIQALNLE-KDAFYREIQLLGRLHHRHLLAL-----QGFSTG 104
                     DG    +K I     + ++   RE  +    +H ++L L     +     
Sbjct: 43  SYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAK 102

Query: 105 RKRLLVFDNIENGSLKEHLNDPL--KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVS 162
            +  L+    + G+L   +         L     L + +G+   LE +         +  
Sbjct: 103 HEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI---HAKGYAHRD 159

Query: 163 ISSSSIMLDENFTAKLSDVGFFNSVRNYATMPHSS----------------CPEDCSTQD 206
           +  ++I+L +     L D+G  N    +      +                 PE  S Q 
Sbjct: 160 LKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQS 219

Query: 207 CSNI-----IFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDS 261
              I     ++ LG ++  ++ G+ P +       + +  S++ ++   +       + S
Sbjct: 220 HCVIDERTDVWSLGCVLYAMMFGEGPYDMV-----FQKGDSVALAVQNQLSIPQSPRH-S 273

Query: 262 KELKKLLA 269
             L +LL 
Sbjct: 274 SALWQLLN 281

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 53.3 bits (128), Expect = 4e-08
 Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 8/109 (7%)

Query: 76  EKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKT 135
            ++ F +E   + +  H H++ L G  T     ++ +    G L+  L    K  LD  +
Sbjct: 434 VREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVR-KFSLDLAS 492

Query: 136 RLQIAIGVAAALEYLLLFSNLPMYYV--SISSSSIMLDENFTAKLSDVG 182
            +  A  ++ AL YL    +    +V   I++ ++++  N   KL D G
Sbjct: 493 LILYAYQLSTALAYL---ES--KRFVHRDIAARNVLVSSNDCVKLGDFG 536

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 52.7 bits (127), Expect = 4e-08
 Identities = 31/142 (21%), Positives = 60/142 (42%), Gaps = 18/142 (12%)

Query: 52  GAAYKARFQDGE-----VAL--VKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG 104
           G  Y     D +      A+  +  I     E   F  E  ++    H ++L+L G    
Sbjct: 39  GCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 97

Query: 105 RK--RLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYV- 161
            +   L+V   +++G L+  + +        K  +   + VA  ++YL   ++    +V 
Sbjct: 98  SEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYL---AS--KKFVH 151

Query: 162 -SISSSSIMLDENFTAKLSDVG 182
             +++ + MLDE FT K++D G
Sbjct: 152 RDLAARNCMLDEKFTVKVADFG 173

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 52.3 bits (126), Expect = 5e-08
 Identities = 20/76 (26%), Positives = 42/76 (55%), Gaps = 2/76 (2%)

Query: 76  EKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLKEHLNDPLKTPLDWK 134
             ++F+    ++ +L H+HL+   G    G + +LV + ++ GSL  +L    K  ++  
Sbjct: 55  YSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKN-KNCINIL 113

Query: 135 TRLQIAIGVAAALEYL 150
            +L++A  +AAA+ +L
Sbjct: 114 WKLEVAKQLAAAMHFL 129

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 52.3 bits (126), Expect = 6e-08
 Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 9/110 (8%)

Query: 76  EKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLKEHLNDPLKTPLDWK 134
           ++  F  E  ++G+  H +++ L+G  T GR  ++V + +ENGSL   L           
Sbjct: 93  QRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH-DGQFTIM 151

Query: 135 TRLQIAIGVAAALEYLLLFSNLPMYYV--SISSSSIMLDENFTAKLSDVG 182
             + +  GV A + YL   S+  + YV   +++ ++++D N   K+SD G
Sbjct: 152 QLVGMLRGVGAGMRYL---SD--LGYVHRDLAARNVLVDSNLVCKVSDFG 196

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 51.9 bits (125), Expect = 6e-08
 Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 7/92 (7%)

Query: 64  VALVKEIQALNLEKD--AFYREIQLLGRLHHRHLLALQGFSTGRKR---LLVFDNIENGS 118
           VA VK ++  +         +EI++L  L+H +++  +G  T        L+ + + +GS
Sbjct: 53  VA-VKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGS 111

Query: 119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYL 150
           LKE+L    K  ++ K +L+ A+ +   ++YL
Sbjct: 112 LKEYLPKN-KNKINLKQQLKYAVQICKGMDYL 142

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 52.1 bits (125), Expect = 8e-08
 Identities = 30/142 (21%), Positives = 59/142 (41%), Gaps = 18/142 (12%)

Query: 52  GAAYKARFQDGE-----VAL--VKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFST- 103
           G  Y     D +      A+  +  I     E   F  E  ++    H ++L+L G    
Sbjct: 103 GCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 161

Query: 104 -GRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYV- 161
                L+V   +++G L+  + +        K  +   + VA  +++L   ++    +V 
Sbjct: 162 SEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFL---AS--KKFVH 215

Query: 162 -SISSSSIMLDENFTAKLSDVG 182
             +++ + MLDE FT K++D G
Sbjct: 216 RDLAARNCMLDEKFTVKVADFG 237

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 51.5 bits (124), Expect = 8e-08
 Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 18/142 (12%)

Query: 52  GAAYKARFQDGE-----VAL--VKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG 104
           G  Y   + D        A+  +  I     + +AF RE  L+  L+H ++LAL G    
Sbjct: 35  GVVYHGEYIDQAQNRIQCAIKSLSRI-TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLP 93

Query: 105 RK--RLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYV- 161
            +    ++   + +G L + +  P +     K  +   + VA  +EYL         +V 
Sbjct: 94  PEGLPHVLLPYMCHGDLLQFIRSP-QRNPTVKDLISFGLQVARGMEYLAE-----QKFVH 147

Query: 162 -SISSSSIMLDENFTAKLSDVG 182
             +++ + MLDE+FT K++D G
Sbjct: 148 RDLAARNCMLDESFTVKVADFG 169

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 51.9 bits (125), Expect = 8e-08
 Identities = 20/123 (16%), Positives = 49/123 (39%), Gaps = 11/123 (8%)

Query: 64  VALVKEIQ--ALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKE 121
           VA +KE++             E  ++  + + H+  L G        L+   +  G L +
Sbjct: 47  VA-IKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLD 105

Query: 122 HLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYV--SISSSSIMLDENFTAKLS 179
           ++ +  K  +  +  L   + +A  + YL    +     V   +++ ++++      K++
Sbjct: 106 YVREH-KDNIGSQYLLNWCVQIAKGMNYL---ED--RRLVHRDLAARNVLVKTPQHVKIT 159

Query: 180 DVG 182
           D G
Sbjct: 160 DFG 162

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 6/91 (6%)

Query: 64  VALVKEIQA-LNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKR---LLVFDNIENGSL 119
           VA VK++Q         F REI++L  L H +++  +G      R    L+ + +  GSL
Sbjct: 42  VA-VKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100

Query: 120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYL 150
           +++L    K  +D    LQ    +   +EYL
Sbjct: 101 RDYLQKH-KERIDHIKLLQYTSQICKGMEYL 130

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 51.2 bits (123), Expect = 1e-07
 Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 6/91 (6%)

Query: 64  VALVKEIQA-LNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKR---LLVFDNIENGSL 119
           VA VK++Q         F REI++L  L H +++  +G      R    L+ + +  GSL
Sbjct: 73  VA-VKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 131

Query: 120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYL 150
           +++L    K  +D    LQ    +   +EYL
Sbjct: 132 RDYLQKH-KERIDHIKLLQYTSQICKGMEYL 161

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 21/123 (17%)

Query: 76  EKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLKEHL----------- 123
            +  F RE +LL  L H+H++   G  T GR  L+VF+ + +G L   L           
Sbjct: 86  ARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLA 145

Query: 124 --NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYV--SISSSSIMLDENFTAKLS 179
              D    PL     L +A  VAA + YL   +   +++V   +++ + ++ +    K+ 
Sbjct: 146 GGEDVAPGPLGLGQLLAVASQVAAGMVYL---AG--LHFVHRDLATRNCLVGQGLVVKIG 200

Query: 180 DVG 182
           D G
Sbjct: 201 DFG 203

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 50.7 bits (122), Expect = 2e-07
 Identities = 27/133 (20%), Positives = 58/133 (43%), Gaps = 13/133 (9%)

Query: 55  YKARFQDGEVALVKEIQALNLE---KDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVF 111
           Y+ +     VA VK ++    +   KD    E  ++ +L + +++ + G       +LV 
Sbjct: 38  YQMKKVVKTVA-VKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVM 96

Query: 112 DNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYV--SISSSSIM 169
           +  E G L ++L          K  +++   V+  ++YL         +V   +++ +++
Sbjct: 97  EMAELGPLNKYLQQNRHVKD--KNIIELVHQVSMGMKYL---EE--SNFVHRDLAARNVL 149

Query: 170 LDENFTAKLSDVG 182
           L     AK+SD G
Sbjct: 150 LVTQHYAKISDFG 162

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 43/162 (26%)

Query: 46  VYTNSHGAAYKARFQDGEVAL--VKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFST 103
           V         +      +VA+  +K     + + + F RE   +    H H+  L G S 
Sbjct: 39  VR---EAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSL 95

Query: 104 -------GRKRLLVFDNIENGSLKEHL----NDPLKTPLDWKTRLQIAIGVAAALEYLLL 152
                      +++   +++G L   L           L  +T ++  + +A  +EYL  
Sbjct: 96  RSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYL-- 153

Query: 153 FSNLPMYYVSISSSS------------IMLDENFTAKLSDVG 182
                        SS             ML E+ T  ++D G
Sbjct: 154 -------------SSRNFIHRDLAARNCMLAEDMTVCVADFG 182

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 16/109 (14%), Positives = 42/109 (38%), Gaps = 8/109 (7%)

Query: 76  EKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKT 135
                  E  ++  + + H+  L G        L+   +  G L +++ +  K  +  + 
Sbjct: 60  ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREH-KDNIGSQY 118

Query: 136 RLQIAIGVAAALEYLLLFSNLPMYYV--SISSSSIMLDENFTAKLSDVG 182
            L   + +A  + YL    +     V   +++ ++++      K++D G
Sbjct: 119 LLNWCVQIAKGMNYL---ED--RRLVHRDLAARNVLVKTPQHVKITDFG 162

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 50.3 bits (121), Expect = 2e-07
 Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 6/92 (6%)

Query: 63  EVALVKEIQ----ALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGS 118
            VA VK ++    +     D F RE+  +  L HR+L+ L G        +V +    GS
Sbjct: 48  SVA-VKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGS 106

Query: 119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYL 150
           L + L    +      T  + A+ VA  + YL
Sbjct: 107 LLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYL 137

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 50.4 bits (121), Expect = 2e-07
 Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 8/109 (7%)

Query: 76  EKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKT 135
              A    +  +G L H H++ L G   G    LV   +  GSL +H+    +  L  + 
Sbjct: 58  SFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQH-RGALGPQL 116

Query: 136 RLQIAIGVAAALEYLLLFSNLPMYYV--SISSSSIMLDENFTAKLSDVG 182
            L   + +A  + YL          V  ++++ +++L      +++D G
Sbjct: 117 LLNWGVQIAKGMYYL---EE--HGMVHRNLAARNVLLKSPSQVQVADFG 160

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 49.6 bits (119), Expect = 4e-07
 Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 6/91 (6%)

Query: 64  VALVKEIQALNLEK-DAFYREIQLLGRLHHRHLLALQGFSTGRKR---LLVFDNIENGSL 119
           VA VK++Q    ++   F REIQ+L  LH   ++  +G S G  R    LV + + +G L
Sbjct: 55  VA-VKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCL 113

Query: 120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYL 150
           ++ L    +  LD    L  +  +   +EYL
Sbjct: 114 RDFLQRH-RARLDASRLLLYSSQICKGMEYL 143

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 49.5 bits (119), Expect = 4e-07
 Identities = 27/132 (20%), Positives = 50/132 (37%), Gaps = 38/132 (28%)

Query: 76  EKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLKEHL----------- 123
            ++ F  E  L  RL H +++ L G  T  +   ++F    +G L E L           
Sbjct: 55  LREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGS 114

Query: 124 ---NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSS----------IML 170
              +  +K+ L+    + +   +AA +EYL             SS            +++
Sbjct: 115 TDDDRTVKSALEPPDFVHLVAQIAAGMEYL-------------SSHHVVHKDLATRNVLV 161

Query: 171 DENFTAKLSDVG 182
            +    K+SD+G
Sbjct: 162 YDKLNVKISDLG 173

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 49.6 bits (119), Expect = 5e-07
 Identities = 16/81 (19%), Positives = 34/81 (41%), Gaps = 6/81 (7%)

Query: 76  EKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLKEHL-----NDPLKT 129
           ++  F  E  ++ + +H++++   G S     R ++ + +  G LK  L          +
Sbjct: 76  DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPS 135

Query: 130 PLDWKTRLQIAIGVAAALEYL 150
            L     L +A  +A   +YL
Sbjct: 136 SLAMLDLLHVARDIACGCQYL 156

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 49.6 bits (119), Expect = 5e-07
 Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 9/92 (9%)

Query: 64  VALVKEIQ--ALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKR---LLVFDNIENGS 118
           VA VK ++  A    +  + +EI +L  L+H H++  +G           LV + +  GS
Sbjct: 63  VA-VKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGS 121

Query: 119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYL 150
           L+++L    +  +     L  A  +   + YL
Sbjct: 122 LRDYLP---RHSIGLAQLLLFAQQICEGMAYL 150

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 49.0 bits (117), Expect = 8e-07
 Identities = 39/242 (16%), Positives = 82/242 (33%), Gaps = 40/242 (16%)

Query: 78  DAFYREIQLLGRLHHRHLLALQG-FSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTR 136
           D F  E+Q++  + + + L  +G  +   +  ++++ +EN S+ +          ++   
Sbjct: 88  DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF 147

Query: 137 L------QIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNY 190
           +       I   V  +  Y  + +   + +  +  S+I++D+N   KLSD G   S    
Sbjct: 148 IPIQVIKCIIKSVLNSFSY--IHNEKNICHRDVKPSNILMDKNGRVKLSDFGE--SEYMV 203

Query: 191 ATMPHSSC-------PEDCSTQDCSNI----IFQLGVLILELVTGQSPEEGDVDL----- 234
                 S        PE  S +   N     I+ LG+ +  +     P    + L     
Sbjct: 204 DKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFN 263

Query: 235 ------IQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPT--ISIP 286
                 I++  + +               ++ S E    L         K+ P   I+  
Sbjct: 264 NIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLK----LFLRKN-PAERITSE 318

Query: 287 QI 288
             
Sbjct: 319 DA 320

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 48.9 bits (117), Expect = 8e-07
 Identities = 16/81 (19%), Positives = 34/81 (41%), Gaps = 6/81 (7%)

Query: 76  EKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLKEHL-----NDPLKT 129
           ++  F  E  ++ + +H++++   G S     R ++ + +  G LK  L          +
Sbjct: 117 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 176

Query: 130 PLDWKTRLQIAIGVAAALEYL 150
            L     L +A  +A   +YL
Sbjct: 177 SLAMLDLLHVARDIACGCQYL 197

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 48.4 bits (116), Expect = 9e-07
 Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 22/124 (17%)

Query: 76  EKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLKEHL----------- 123
            +  F RE +LL  L H H++   G    G   ++VF+ +++G L + L           
Sbjct: 60  ARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILV 119

Query: 124 ---NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYV--SISSSSIMLDENFTAKL 178
                  K  L     L IA  +A+ + YL   ++   ++V   +++ + ++  N   K+
Sbjct: 120 DGQPRQAKGELGLSQMLHIASQIASGMVYL---AS--QHFVHRDLATRNCLVGANLLVKI 174

Query: 179 SDVG 182
            D G
Sbjct: 175 GDFG 178

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 46.8 bits (112), Expect = 3e-06
 Identities = 40/210 (19%), Positives = 81/210 (38%), Gaps = 30/210 (14%)

Query: 68  KEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRL-LVFDNIENGSLKEHLNDP 126
            +++   +E     RE+++   L H ++L L G+     R+ L+ +    G++   L   
Sbjct: 45  AQLEKAGVEHQ-LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 103

Query: 127 LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNS 186
            K   + +T   I   +A AL Y     +  + +  I   +++L      K++D G+  S
Sbjct: 104 SKFD-EQRTATYIT-ELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGW--S 156

Query: 187 VRNYATMPHSSC-------PEDCSTQ--DCSNIIFQLGVLILELVTGQSP--EEGDVDLI 235
           V   ++     C       PE    +  D    ++ LGVL  E + G+ P       +  
Sbjct: 157 VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 216

Query: 236 QWIQE------SSISSS----IHRMIDPDL 255
           + I          ++      I R++  + 
Sbjct: 217 KRISRVEFTFPDFVTEGARDLISRLLKHNP 246

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 46.9 bits (112), Expect = 3e-06
 Identities = 29/134 (21%), Positives = 51/134 (38%), Gaps = 39/134 (29%)

Query: 76  EKDAFYREIQLLGRL-HHRHLLALQGFSTGRKRL-LVFDNIENGSLKEHL---------- 123
           +   F  E+++L +L HH +++ L G    R  L L  +   +G+L + L          
Sbjct: 68  DHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDP 127

Query: 124 ----NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSS----------IM 169
                +   + L  +  L  A  VA  ++YL             S             I+
Sbjct: 128 AFAIANSTASTLSSQQLLHFAADVARGMDYL-------------SQKQFIHRDLAARNIL 174

Query: 170 LDENFTAKLSDVGF 183
           + EN+ AK++D G 
Sbjct: 175 VGENYVAKIADFGL 188

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 47.1 bits (112), Expect = 3e-06
 Identities = 45/244 (18%), Positives = 83/244 (34%), Gaps = 43/244 (17%)

Query: 50  SHGAAYKAR-FQDGEVALVKEIQALNLEK-DAFYREIQLLGRL-HHRHLLAL-------- 98
                Y+A+    G    +K + +   EK  A  +E+  + +L  H +++          
Sbjct: 40  GFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGK 99

Query: 99  QGFSTGRKRLLVFDNIENGSLKEHLND-PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLP 157
           +   TG+   L+   +  G L E L     + PL   T L+I      A++++      P
Sbjct: 100 EESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH-RQKPP 158

Query: 158 MYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYATMPHSS-------------------C 198
           + +  +   +++L    T KL D G   ++ +Y     S+                    
Sbjct: 159 IIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRT 218

Query: 199 PEDCSTQDCSNI-----IFQLGVLILELVTGQSPEEGDVDL------IQWIQESSISSSI 247
           PE         I     I+ LG ++  L   Q P E    L             +  +  
Sbjct: 219 PEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKYSIPPHDTQYTVF 278

Query: 248 HRMI 251
           H +I
Sbjct: 279 HSLI 282

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 46.6 bits (111), Expect = 4e-06
 Identities = 38/224 (16%), Positives = 87/224 (38%), Gaps = 24/224 (10%)

Query: 52  GAAYKAR-FQDG-EVALVKEIQALNLEKD---AFYREIQLLGRLHHRHLL----ALQGFS 102
              YK    +   EVA   E+Q   L K     F  E ++L  L H +++    + +   
Sbjct: 40  KTVYKGLDTETTVEVA-WCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV 98

Query: 103 TGRKRLLVF-DNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYV 161
            G+K +++  + + +G+LK +L       +  K        +   L++L      P+ + 
Sbjct: 99  KGKKCIVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHT-RTPPIIHR 155

Query: 162 SISSSSIMLD-ENFTAKLSDVGF--FNSVRNYATM---PHSSCPEDCSTQDCSNI-IFQL 214
            +   +I +     + K+ D+G            +   P    PE    +   ++ ++  
Sbjct: 156 DLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAF 215

Query: 215 GVLILELVTGQSP---EEGDVDLIQWIQESSISSSIHRMIDPDL 255
           G+ +LE+ T + P    +    + + +      +S  ++  P++
Sbjct: 216 GMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEV 259

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 46.1 bits (110), Expect = 7e-06
 Identities = 21/133 (15%), Positives = 49/133 (36%), Gaps = 39/133 (29%)

Query: 76  EKDAFYREIQLLGRL-HHRHLLALQGFST-GRKRLLVFDNIENGSLKEHL---------- 123
           +      E++++  +  H++++ L G  T      ++ +    G+L+E+L          
Sbjct: 83  DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 142

Query: 124 ----NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSS----------IM 169
               N   +  + +K  +     +A  +EYL             +S            ++
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYL-------------ASQKCIHRDLAARNVL 189

Query: 170 LDENFTAKLSDVG 182
           + EN   K++D G
Sbjct: 190 VTENNVMKIADFG 202

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 45.8 bits (109), Expect = 8e-06
 Identities = 21/133 (15%), Positives = 49/133 (36%), Gaps = 39/133 (29%)

Query: 76  EKDAFYREIQLLGRL-HHRHLLALQGFST-GRKRLLVFDNIENGSLKEHL---------- 123
           +      E++++  +  H++++ L G  T      ++ +    G+L+E+L          
Sbjct: 129 DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 188

Query: 124 ----NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSS----------IM 169
               N   +  + +K  +     +A  +EYL             +S            ++
Sbjct: 189 SYDINRVPEEQMTFKDLVSCTYQLARGMEYL-------------ASQKCIHRDLAARNVL 235

Query: 170 LDENFTAKLSDVG 182
           + EN   K++D G
Sbjct: 236 VTENNVMKIADFG 248

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 45.3 bits (108), Expect = 9e-06
 Identities = 24/143 (16%), Positives = 46/143 (32%), Gaps = 50/143 (34%)

Query: 76  EKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLKEHL----------- 123
           E      E  +L +++H H++ L G  +     LL+ +  + GSL+  L           
Sbjct: 69  ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL 128

Query: 124 -----------NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSS----- 167
                      + P +  L     +  A  ++  ++YL               +      
Sbjct: 129 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---------------AEMKLVH 173

Query: 168 -------IMLDENFTAKLSDVGF 183
                  I++ E    K+SD G 
Sbjct: 174 RDLAARNILVAEGRKMKISDFGL 196

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 45.0 bits (107), Expect = 1e-05
 Identities = 34/267 (12%), Positives = 78/267 (29%), Gaps = 46/267 (17%)

Query: 50  SHGAAYKAR-FQDGEVALVKEIQALNL---EKDAFYREIQLLGRL-HHRHLLALQGFSTG 104
             G+ +K     DG +  +K  +       ++    RE+     L  H H++        
Sbjct: 23  EFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAE 82

Query: 105 RKRLLVF-DNIENGSLKEHLNDPLKT--PLDWKTRLQIAIGVAAALEYL----------- 150
              +L+  +    GSL + +++  +            + + V   L Y+           
Sbjct: 83  DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIK 142

Query: 151 -----LLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYATM---PHSSCPEDC 202
                +  +++P                   K+ D+G    + +             E  
Sbjct: 143 PSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVL 202

Query: 203 STQDCSNI---IFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSY 259
                      IF L + ++     +       D    I++  +         P +    
Sbjct: 203 QENYTHLPKADIFALALTVVCAAGAEPLPRNG-DQWHEIRQGRL---------PRIPQVL 252

Query: 260 DSKELKKLLAVARLCIKT--KDKPTIS 284
            S+E  +LL   ++ I    + +P+  
Sbjct: 253 -SQEFTELL---KVMIHPDPERRPSAM 275

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 37/209 (17%), Positives = 78/209 (37%), Gaps = 30/209 (14%)

Query: 68  KEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRL-LVFDNIENGSLKEHLNDP 126
            +++   +E     REI++   L H ++L +  +   RKR+ L+ +    G L + L   
Sbjct: 50  SQLEKEGVEHQ-LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH 108

Query: 127 LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNS 186
            +   + ++   +   +A AL Y        + +  I   ++++      K++D G+  S
Sbjct: 109 GRFD-EQRSATFME-ELADALHYC---HERKVIHRDIKPENLLMGYKGELKIADFGW--S 161

Query: 187 VRNYATMPHSSC-------PEDCSTQ--DCSNIIFQLGVLILELVTGQSP--EEGDVDLI 235
           V   +    + C       PE    +  D    ++  GVL  E + G  P       +  
Sbjct: 162 VHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETH 221

Query: 236 QWIQE------SSISSS----IHRMIDPD 254
           + I          +S      I +++   
Sbjct: 222 RRIVNVDLKFPPFLSDGSKDLISKLLRYH 250

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 45.3 bits (107), Expect = 1e-05
 Identities = 41/214 (19%), Positives = 71/214 (33%), Gaps = 50/214 (23%)

Query: 49  NSHGAAYKARF-QDGEVALVKEIQALNLEK------DAFYREIQLLGRLHHRHLLALQG- 100
                   AR+   GE   V+ I   NLE            E+ +    +H +++  +  
Sbjct: 38  EDLMTVNLARYKPTGEYVTVRRI---NLEACSNEMVTFLQGELHVSKLFNHPNIVPYRAT 94

Query: 101 FSTGRKRLLVFDNIENGS----LKEHLNDPLKTPLDWKTRLQIAI---GVAAALEYLLLF 153
           F    +  +V   +  GS    +  H  D +           IA    GV  AL+Y+   
Sbjct: 95  FIADNELWVVTSFMAYGSAKDLICTHFMDGMNEL-------AIAYILQGVLKALDYIH-- 145

Query: 154 SNLPMYYV--SISSSSIMLDENFTAKLSDVGF----FNSVRNYATMPHSSC--------- 198
               M YV  S+ +S I++  +    LS +       +  +    +              
Sbjct: 146 ---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWL 202

Query: 199 -PE----DCSTQDCSNIIFQLGVLILELVTGQSP 227
            PE    +    D  + I+ +G+   EL  G  P
Sbjct: 203 SPEVLQQNLQGYDAKSDIYSVGITACELANGHVP 236

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 30/140 (21%), Positives = 47/140 (33%), Gaps = 46/140 (32%)

Query: 76  EKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLKEHL----------- 123
            +  F RE  L+    + +++ L G    G+   L+F+ +  G L E L           
Sbjct: 93  MQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSL 152

Query: 124 -----------NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSS----- 167
                      + P   PL    +L IA  VAA + YL             S        
Sbjct: 153 SHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL-------------SERKFVHRD 199

Query: 168 -----IMLDENFTAKLSDVG 182
                 ++ EN   K++D G
Sbjct: 200 LATRNCLVGENMVVKIADFG 219

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 44.8 bits (106), Expect = 2e-05
 Identities = 43/232 (18%), Positives = 68/232 (29%), Gaps = 58/232 (25%)

Query: 52  GAAYKA---RFQDGEVALVKEIQALNLEKDA-----FYREIQLLGRLHHRHLLAL--QGF 101
           G  Y A         V  +K    L    DA        E Q L  + H  ++ +     
Sbjct: 94  GWIYLALDRNVNGRPVV-LK---GLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVE 149

Query: 102 STGRKRL----LVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYL----LLF 153
            T R       +V + +   SLK      L         +   + +  AL YL    L++
Sbjct: 150 HTDRHGDPVGYIVMEYVGGQSLKRSKGQKL----PVAEAIAYLLEILPALSYLHSIGLVY 205

Query: 154 -----SNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYATM---PHSSCPEDCSTQ 205
                 N            IML E    KL D+G  + + ++  +   P    PE   T 
Sbjct: 206 NDLKPEN------------IMLTEE-QLKLIDLGAVSRINSFGYLYGTPGFQAPEIVRTG 252

Query: 206 -----DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMID 252
                D    I+ +G  +  L        G    +  + E       +    
Sbjct: 253 PTVATD----IYTVGRTLAALTLDLPTRNG--RYVDGLPEDDPVLKTYDSYG 298

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 27/135 (20%), Positives = 49/135 (36%), Gaps = 40/135 (29%)

Query: 76  EKDAFYREIQLLGRL-HHRHLLALQGFST--GRKRLLVFDNIENGSLKEHL--------- 123
           E  A   E+++L  + HH +++ L G  T  G   +++ +  + G+L  +L         
Sbjct: 73  EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132

Query: 124 -----NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSS----------I 168
                 D  K  L  +  +  +  VA  +E+L             +S            I
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL-------------ASRKCIHRDLAARNI 179

Query: 169 MLDENFTAKLSDVGF 183
           +L E    K+ D G 
Sbjct: 180 LLSEKNVVKICDFGL 194

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 43.8 bits (104), Expect = 4e-05
 Identities = 26/143 (18%), Positives = 47/143 (32%), Gaps = 42/143 (29%)

Query: 67  VKEIQALNLEKDAFYREIQLLGRL-HHRHLLALQGFST-GRKRLLVFDNIENGSLKEHL- 123
           +K   A   EK+A   E++++  L  H +++ L G  T G   L++ +    G L   L 
Sbjct: 84  LKS-TAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR 142

Query: 124 -----------NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSS----- 167
                           +    +  L  +  VA  + +L               +S     
Sbjct: 143 RKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFL---------------ASKNCIH 187

Query: 168 -------IMLDENFTAKLSDVGF 183
                  ++L     AK+ D G 
Sbjct: 188 RDVAARNVLLTNGHVAKIGDFGL 210

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 43.8 bits (104), Expect = 4e-05
 Identities = 30/150 (20%), Positives = 54/150 (36%), Gaps = 44/150 (29%)

Query: 64  VA--LVKEIQALNLEKDAFYREIQLLGRL-HHRHLLALQGFST-GRKRLLVFDNIENGSL 119
           VA  ++K   A   E++A   E+++L  L +H +++ L G  T G   L++ +    G L
Sbjct: 56  VAVKMLKP-SAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 114

Query: 120 KEHL----------------NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSI 163
              L                 +  +  LD +  L  +  VA  + +L             
Sbjct: 115 LNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL------------- 161

Query: 164 SSSS----------IMLDENFTAKLSDVGF 183
           +S +          I+L      K+ D G 
Sbjct: 162 ASKNCIHRDLAARNILLTHGRITKICDFGL 191

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 43.0 bits (102), Expect = 5e-05
 Identities = 37/203 (18%), Positives = 84/203 (41%), Gaps = 43/203 (21%)

Query: 80  FYREIQLLGRLHHRHLLAL--QGFSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRL 137
           F RE+    +L H++++++            LV + IE  +L E++      PL   T +
Sbjct: 58  FEREVHNSSQLSHQNIVSMIDVD-EEDDCYYLVMEYIEGPTLSEYIES--HGPLSVDTAI 114

Query: 138 QIAIGVAAALEYLLLFSNLPMYYVS---------ISSSSIMLDENFTAKLSDVGFFNSVR 188
                +   +++            +         I   +I++D N T K+ D G   ++ 
Sbjct: 115 NFTNQILDGIKH------------AHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162

Query: 189 NYATMPHSSC---------PEDCSTQ--DCSNIIFQLGVLILELVTGQSPEEGDVDL--- 234
              ++  ++          PE    +  D    I+ +G+++ E++ G+ P  G+  +   
Sbjct: 163 E-TSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA 221

Query: 235 IQWIQES--SISSSIHRMIDPDL 255
           I+ IQ+S  ++++ + + I   L
Sbjct: 222 IKHIQDSVPNVTTDVRKDIPQSL 244

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 6e-05
 Identities = 41/255 (16%), Positives = 76/255 (29%), Gaps = 73/255 (28%)

Query: 93  RHLLALQGFSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAAL----- 147
           R LL  + +      LLV  N++N       N   K  L   TR      V   L     
Sbjct: 235 RRLLKSKPY---ENCLLVLLNVQNAKAWNAFNLSCKILL--TTR---FKQVTDFLSAATT 286

Query: 148 ---------------EYLLLFSN--------LPMYYVSISSSSIMLDENFTAKLSD-VGF 183
                          E   L           LP   ++ +   + +       + D +  
Sbjct: 287 THISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSI---IAESIRDGLAT 343

Query: 184 FNSVRNYATMPHSSCPEDCST-----------QDCSNIIFQLGVLI----LELVTGQSPE 228
           +++ ++      ++  E                  S  +F     I    L L+     +
Sbjct: 344 WDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS--VFPPSAHIPTILLSLIWFDVIK 401

Query: 229 EGDVDLI-----------QWIQESSISSSIHRMIDPDLGGSYDSK-ELKKLLAVARLCIK 276
             DV ++           +  +ES+I  SI   I  +L    +++  L + +       K
Sbjct: 402 S-DVMVVVNKLHKYSLVEKQPKESTI--SIP-SIYLELKVKLENEYALHRSIVDHYNIPK 457

Query: 277 TKDKPTISIPQISRY 291
           T D   +  P + +Y
Sbjct: 458 TFDSDDLIPPYLDQY 472

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 42.4 bits (100), Expect = 7e-05
 Identities = 24/163 (14%), Positives = 48/163 (29%), Gaps = 38/163 (23%)

Query: 76  EKDAFYREIQLLGRLHHRHLLALQGFSTGRKRL-LVFDNIENGSLKEHLNDPLKTPLDWK 134
                      L R+    +  +      R    +V + I  GSL+E  +    +P+   
Sbjct: 74  VLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADTSP-SPVG-- 130

Query: 135 TRLQIAIGVAAALEY------LLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR 188
             ++    +AAA +        L              S + +  +    L+         
Sbjct: 131 -AIRAMQSLAAAADAAHRAGVALS---------IDHPSRVRVSIDGDVVLAYPA------ 174

Query: 189 NYATMPHSSCPEDCSTQDCSNIIFQLGVLILELVTGQSPEEGD 231
              TMP ++  +D         I  +G  +  L+  + P    
Sbjct: 175 ---TMPDANPQDD---------IRGIGASLYALLVNRWPLPEA 205

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 42.7 bits (100), Expect = 9e-05
 Identities = 36/239 (15%), Positives = 68/239 (28%), Gaps = 41/239 (17%)

Query: 50  SHGAAYKARFQDGEVALVKEIQALNLEKDA----FYREIQLLGRL---HHRHLLALQG-F 101
           +    Y+A   D   A  K+   L ++K A    FY   QL+ RL        +      
Sbjct: 77  AFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAH 136

Query: 102 STGRKRLLVFDNIENGSLKEHLNDPLKT---PLDWKTRLQIAIGVAAALEYL-------- 150
                 +LV +    G+L   +N    T    +     +  A+ +   +E +        
Sbjct: 137 LFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHG 196

Query: 151 -LLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYATMPHSSCPEDCST--QDC 207
            +   N  +            D +    L D+G   S+        +     C T    C
Sbjct: 197 DIKPDNF-ILGNGFLEQDDEDDLSAGLALIDLGQ--SIDMKLFPKGTIFTAKCETSGFQC 253

Query: 208 SNI-----------IFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDL 255
             +            F +   +  ++ G   +  +        E        R+   D+
Sbjct: 254 VEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEG-----GECKPEGLFRRLPHLDM 307

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 42.5 bits (100), Expect = 1e-04
 Identities = 44/270 (16%), Positives = 88/270 (32%), Gaps = 60/270 (22%)

Query: 55  YKARFQDGEVALVKEIQALNLEKDA---FYREIQLLGRLHH--RHLLALQGFSTGRKRLL 109
           ++   +  ++  +K +     +      +  EI  L +L      ++ L  +    + + 
Sbjct: 73  FQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 132

Query: 110 VFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYL---------LLFSNLPMYY 160
           +     N  L   L    K  +D   R      +  A+  +         L  +N     
Sbjct: 133 MVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPAN----- 185

Query: 161 VSISSSSIMLDENFTAKLSDVGFFNSVRNYATMPH--SSC-------PEDCSTQDCSNII 211
                   ++ +    KL D G  N ++   T     S         PE       S   
Sbjct: 186 -------FLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSREN 237

Query: 212 FQ-------------LGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGS 258
            +             LG ++  +  G++P +  ++ I  +    I    H +  PD    
Sbjct: 238 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA--IIDPNHEIEFPD---- 291

Query: 259 YDSKELKKLLAVARLCIKTKDKPTISIPQI 288
              K+L+ +L   + C+K   K  ISIP++
Sbjct: 292 IPEKDLQDVL---KCCLKRDPKQRISIPEL 318

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 22/133 (16%), Positives = 49/133 (36%), Gaps = 39/133 (29%)

Query: 76  EKDAFYREIQLLGRL-HHRHLLALQGFST-GRKRLLVFDNIENGSLKEHL---------- 123
           +      E++++  +  H++++ L G  T      ++ +    G+L+E+L          
Sbjct: 117 DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEY 176

Query: 124 ----NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSS----------IM 169
               +   +  L  K  +  A  VA  +EYL             +S            ++
Sbjct: 177 SYNPSHNPEEQLSSKDLVSCAYQVARGMEYL-------------ASKKCIHRDLAARNVL 223

Query: 170 LDENFTAKLSDVG 182
           + E+   K++D G
Sbjct: 224 VTEDNVMKIADFG 236

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 41.0 bits (97), Expect = 3e-04
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 10/89 (11%)

Query: 50  SHGAAYKARFQDGE-VALVKEIQALNLEKDAF----YREIQLLGRLHHRHLLALQGFSTG 104
           ++G  YKA+   G  VAL K I+ L+ E +       REI LL  LHH ++++L      
Sbjct: 33  TYGVVYKAKDSQGRIVAL-KRIR-LDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHS 90

Query: 105 RKRL-LVFDNIENGSLKEHLNDPLKTPLD 132
            + L LVF+ +E   LK+ L++  KT L 
Sbjct: 91  ERCLTLVFEFMEK-DLKKVLDE-NKTGLQ 117

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 41.2 bits (96), Expect = 4e-04
 Identities = 41/232 (17%), Positives = 82/232 (35%), Gaps = 51/232 (21%)

Query: 63  EVALVKEIQALNLEK--DAFYREIQLLGRLHHRHLLAL-------QGFSTGRKRLLVFDN 113
           +VA +K+ +     K  + +  EIQ++ +L+H ++++        Q  +     LL  + 
Sbjct: 41  QVA-IKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEY 99

Query: 114 IENGSLKEHLNDPLK-TPLDWKTRLQIAIGVAAALEYL---------------LLFSNLP 157
            E G L+++LN       L       +   +++AL YL               +L     
Sbjct: 100 CEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPG-- 157

Query: 158 MYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYATMPHSSC-------PEDCSTQ--DCS 208
                         +    K+ D+G+   +     +            PE    +    +
Sbjct: 158 -------------PQRLIHKIIDLGYAKELDQ-GELCTEFVGTLQYLAPELLEQKKYTVT 203

Query: 209 NIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYD 260
              +  G L  E +TG  P   +   +QW  +    S+ H ++  DL G+  
Sbjct: 204 VDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVK 255

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 40.8 bits (95), Expect = 4e-04
 Identities = 22/153 (14%), Positives = 39/153 (25%), Gaps = 36/153 (23%)

Query: 130 PLDWKTRLQIAIGVAAALEYL----LLFSNL-PMYYVSISSSSIMLDENFTAKLSDVGFF 184
            L    RLQ+ + V   L  L    L+ + L P          I+LD+     L+     
Sbjct: 207 SLVHHARLQLTLQVIRLLASLHHYGLVHTYLRP--------VDIVLDQRGGVFLTGFEHL 258

Query: 185 NSV-RNYATMPHSSC-------PEDCSTQDCSNI-------IFQLGVLILELVTGQSPEE 229
                +  +                                 + LG+ I  +     P  
Sbjct: 259 VRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNT 318

Query: 230 GD--VDLIQWIQESSISSS------IHRMIDPD 254
            D  +   +WI  S  +        +   +   
Sbjct: 319 DDAALGGSEWIFRSCKNIPQPVRALLEGFLRYP 351

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 40.2 bits (95), Expect = 4e-04
 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 10/89 (11%)

Query: 50  SHGAAYKARFQDGE-VALVKEIQALNLEKDAF----YREIQLLGRLHHRHLLALQGFSTG 104
           ++G  YKA+   GE  AL K+I+ L  E +       REI +L  L H +++ L      
Sbjct: 14  TYGVVYKAQNNYGETFAL-KKIR-LEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT 71

Query: 105 RKRL-LVFDNIENGSLKEHLNDPLKTPLD 132
           +KRL LVF++++   LK+ L D  +  L+
Sbjct: 72  KKRLVLVFEHLDQ-DLKKLL-DVCEGGLE 98

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 40.2 bits (95), Expect = 4e-04
 Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 10/90 (11%)

Query: 50  SHGAAYKAR-FQDGE-VALVKEIQALNLEKDAF----YREIQLLGRLHHRHLLALQGFST 103
           ++G  YKAR    GE VAL K+I+ L+ E +       REI LL  L+H +++ L     
Sbjct: 15  TYGVVYKARNKLTGEVVAL-KKIR-LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH 72

Query: 104 GRKRL-LVFDNIENGSLKEHLNDPLKTPLD 132
              +L LVF+ +    LK+ ++    T + 
Sbjct: 73  TENKLYLVFEFLHQ-DLKKFMDASALTGIP 101

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 40.0 bits (94), Expect = 5e-04
 Identities = 41/237 (17%), Positives = 73/237 (30%), Gaps = 38/237 (16%)

Query: 50  SHGAAYKAR-FQDGEVALVKEIQALNL---EKDAFYREIQLLGRL-HHRHLLALQG-FST 103
           S+G  +K R  +DG +  VK   +      ++     E+    ++  H   + L+  +  
Sbjct: 69  SYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEE 128

Query: 104 GRKRLLVFDNIE--NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYV 161
           G    L     E    SL++H        L              AL +L    +  + ++
Sbjct: 129 GGILYLQ---TELCGPSLQQHCEAW-GASLPEAQVWGYLRDTLLALAHL---HSQGLVHL 181

Query: 162 SISSSSIMLDENFTAKLSDVGFFNSVRNYATMPHSS---------CPEDCSTQ-DCSNII 211
            +  ++I L      KL D   F  +    T               PE        +  +
Sbjct: 182 DVKPANIFLGPRGRCKLGD---FGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGTAADV 238

Query: 212 FQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL 268
           F LG+ ILE+                             + P+      S EL+ +L
Sbjct: 239 FSLGLTILEVACNMEL---------PHGGEGWQQLRQGYLPPEFTAGL-SSELRSVL 285

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 40.1 bits (94), Expect = 5e-04
 Identities = 45/270 (16%), Positives = 89/270 (32%), Gaps = 60/270 (22%)

Query: 55  YKARFQDGEVALVKEIQALNLEKDA---FYREIQLLGRL--HHRHLLALQGFSTGRKRLL 109
           ++   +  ++  +K +     +      +  EI  L +L  H   ++ L  +    + + 
Sbjct: 26  FQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 85

Query: 110 VFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYL---------LLFSNLPMYY 160
           +     N  L   L    K  +D   R      +  A+  +         L  +N     
Sbjct: 86  MVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPAN----- 138

Query: 161 VSISSSSIMLDENFTAKLSDVGFFNSVRNYATMPH--SSC-------PEDCSTQDCSNII 211
                   ++ +    KL D G  N ++   T     S         PE       S   
Sbjct: 139 -------FLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 190

Query: 212 FQ-------------LGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGS 258
            +             LG ++  +  G++P +  ++ I  +    I    H +  PD    
Sbjct: 191 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA--IIDPNHEIEFPD---- 244

Query: 259 YDSKELKKLLAVARLCIKTKDKPTISIPQI 288
              K+L+ +L   + C+K   K  ISIP++
Sbjct: 245 IPEKDLQDVL---KCCLKRDPKQRISIPEL 271

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 40.0 bits (94), Expect = 6e-04
 Identities = 45/272 (16%), Positives = 90/272 (33%), Gaps = 64/272 (23%)

Query: 55  YKARFQDGEVALVKEIQALNLEKDA---FYREIQLLGRL--HHRHLLALQGFSTGRKRLL 109
           ++   +  ++  +K +     +      +  EI  L +L  H   ++ L  +    + + 
Sbjct: 45  FQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 104

Query: 110 VFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYL---------LLFSNLPMYY 160
           +     N  L   L    K  +D   R      +  A+  +         L  +N     
Sbjct: 105 MVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPAN----- 157

Query: 161 VSISSSSIMLDENFTAKLSDVGFFNSVRNYATMPH--SSC-------PEDCSTQDCSNII 211
                   ++ +    KL D G  N ++   T     S         PE       S   
Sbjct: 158 -------FLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 209

Query: 212 FQ-------------LGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGS 258
            +             LG ++  +  G++P +  ++ I  +    I    H +  PD    
Sbjct: 210 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA--IIDPNHEIEFPD---- 263

Query: 259 YDSKELKKLLAVARLCIKTKDKPT--ISIPQI 288
              K+L+ +L   + C+  +D P   ISIP++
Sbjct: 264 IPEKDLQDVL---KCCL-KRD-PKQRISIPEL 290

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 40.0 bits (94), Expect = 6e-04
 Identities = 24/141 (17%), Positives = 46/141 (32%), Gaps = 46/141 (32%)

Query: 76  EKDAFYREIQLLGRL-HHRHLLALQGFST-GRKRLLVFDNIENGSLKEHL---------- 123
           E++A   E++++ +L  H +++ L G  T      L+F+    G L  +L          
Sbjct: 91  EREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSED 150

Query: 124 -----------NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSS----- 167
                       +     L ++  L  A  VA  +E+L                S     
Sbjct: 151 EIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFL-------------EFKSCVHRD 197

Query: 168 -----IMLDENFTAKLSDVGF 183
                +++      K+ D G 
Sbjct: 198 LAARNVLVTHGKVVKICDFGL 218

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	309
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.95
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.89
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.86
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.79
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.63
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.24
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.14
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.07
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.75
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.61
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.52
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.37
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.26
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.25
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.25
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.03
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	97.99
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.72
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	97.61
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.59
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	97.51
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	97.48
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	97.32
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	97.3
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	97.24
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	97.15
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	97.1
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	97.02
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	96.93
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	96.6
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	96.46
3mes_A	424	Choline kinase; malaria, structural genomics, stru	95.84
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	80.08
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	80.02

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=5.6e-53  Score=371.61  Aligned_cols=242  Identities=22%  Similarity=0.284  Sum_probs=192.6

Q ss_pred             cccccccCCCceEEEEEEcCCcEEEEEEecccccc---HHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCCCC
Q 021659           42 FHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLE---KDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGS  118 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~~s  118 (309)
                      +.+.||+|+||+||+|++.+  .||+|+++.....   .+.|.+|++++++++|||||+++|++.+...++|||||++|+
T Consensus        40 l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~iVmEy~~gGs  117 (307)
T 3omv_A           40 LSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSS  117 (307)
T ss_dssp             EEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECCSSCB
T ss_pred             EeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECCeEEEEEEcCCCCC
Confidence            34689999999999998743  5899998643332   457899999999999999999999998888899999999999


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---------c
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---------N  189 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---------~  189 (309)
                      |.+++... ...+++..+..++.|++.||.||   |+++|+||||||+|||++.++.+||+|||+++...         .
T Consensus       118 L~~~l~~~-~~~l~~~~~~~i~~qia~gL~yL---H~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~  193 (307)
T 3omv_A          118 LYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYL---HAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQ  193 (307)
T ss_dssp             HHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHH---HHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC------------
T ss_pred             HHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHH---HHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecc
Confidence            99999653 46799999999999999999999   67799999999999999999999999999997542         2


Q ss_pred             cCCCCCCCCCCCCC-----CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHH
Q 021659          190 YATMPHSSCPEDCS-----TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKEL  264 (309)
Q Consensus       190 ~~~~~~~~~PE~~~-----~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  264 (309)
                      ..||+.|+|||...     .++.++|||||||++|||+||+.||.+..............     ...|.+.. ...+..
T Consensus       194 ~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~-----~~~p~~~~-~~~~~~  267 (307)
T 3omv_A          194 PTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRG-----YASPDLSK-LYKNCP  267 (307)
T ss_dssp             CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTT-----CCCCCSTT-SCTTSC
T ss_pred             cccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcC-----CCCCCccc-ccccch
Confidence            46899999999643     24678999999999999999999998655433322222111     11121111 111123


Q ss_pred             HHHHHHHHHccCCCCCCCCChHHHHHHHhhh
Q 021659          265 KKLLAVARLCIKTKDKPTISIPQISRYLQNE  295 (309)
Q Consensus       265 ~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~  295 (309)
                      ..+.+++.+||+.||++|||+.||++.|+.+
T Consensus       268 ~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l  298 (307)
T 3omv_A          268 KAMKRLVADCVKKVKEERPLFPQILSSIELL  298 (307)
T ss_dssp             HHHHHHHHHHTCSSSTTSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            4566777799999999999999999998754

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=3.5e-53  Score=374.04  Aligned_cols=251  Identities=19%  Similarity=0.285  Sum_probs=197.3

Q ss_pred             HHHHhhcccccccccCCCceEEEEEE------cCCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeC-
Q 021659           34 DIKMATDGFHRIVYTNSHGAAYKARF------QDGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTG-  104 (309)
Q Consensus        34 ~i~~~~~~~~~~lg~G~~~~v~~~~~------~~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-  104 (309)
                      +|....-.|.+.||+|+||.||+|++      .+++.||+|++....  ...++|.+|+.++++|+|||||+++|+|.+ 
T Consensus        22 ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~  101 (308)
T 4gt4_A           22 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKD  101 (308)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             cCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEEC
Confidence            34444455778999999999999986      246789999995432  335789999999999999999999998875 


Q ss_pred             CeeEEEEeeCCCCCHHHhhcCCC--------------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceee
Q 021659          105 RKRLLVFDNIENGSLKEHLNDPL--------------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIML  170 (309)
Q Consensus       105 ~~~~lv~e~~~~~sL~~~i~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill  170 (309)
                      ...++|||||++|+|.+++....              ...+++..+..++.|++.||.||   |+++|+||||||+|||+
T Consensus       102 ~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yL---H~~~iiHRDLK~~NILl  178 (308)
T 4gt4_A          102 QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLV  178 (308)
T ss_dssp             SSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEE
T ss_pred             CEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHH---HhCCCCCCCccccceEE
Confidence            67889999999999999995421              24699999999999999999999   67899999999999999


Q ss_pred             CCCCceeEeccccccccc---------ccCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHH
Q 021659          171 DENFTAKLSDVGFFNSVR---------NYATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWI  238 (309)
Q Consensus       171 ~~~~~~kl~dfg~~~~~~---------~~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~  238 (309)
                      +.++.+||+|||+++...         ...+|+.|+|||..  ..++.++|||||||++|||+| |..||.+.... +.+
T Consensus       179 ~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~-~~~  257 (308)
T 4gt4_A          179 YDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ-DVV  257 (308)
T ss_dssp             CGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH-HHH
T ss_pred             CCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH-HHH
Confidence            999999999999987432         23577889999964  445889999999999999998 89999865432 222


Q ss_pred             HHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcc
Q 021659          239 QESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDI  298 (309)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~  298 (309)
                      ... ..+...     ..+..+    ...+.+++.+||+.||++|||+.||++.|+...++
T Consensus       258 ~~i-~~~~~~-----~~p~~~----~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~nl  307 (308)
T 4gt4_A          258 EMI-RNRQVL-----PCPDDC----PAWVYALMIECWNEFPSRRPRFKDIHSRLRAWGNL  307 (308)
T ss_dssp             HHH-HTTCCC-----CCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCC-
T ss_pred             HHH-HcCCCC-----CCcccc----hHHHHHHHHHHcCCChhHCcCHHHHHHHHHhccCC
Confidence            211 111111     111222    34566777799999999999999999999976554

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=1.6e-51  Score=359.74  Aligned_cols=235  Identities=18%  Similarity=0.220  Sum_probs=188.7

Q ss_pred             cccccccCCCceEEEEEEc-CCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC-----CeeEEEEe
Q 021659           42 FHRIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG-----RKRLLVFD  112 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~-----~~~~lv~e  112 (309)
                      |.+.||+|+||.||+|.+. ++..||+|.+.....   ..+.|.+|++++++|+|||||++++++.+     ...|+|||
T Consensus        30 ~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmE  109 (290)
T 3fpq_A           30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE  109 (290)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred             eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEe
Confidence            4457999999999999974 588999999954332   34578999999999999999999997642     34689999


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCC--eeecccCCCceeeCC-CCceeEeccccccccc-
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLP--MYYVSISSSSIMLDE-NFTAKLSDVGFFNSVR-  188 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~--i~H~dl~p~nill~~-~~~~kl~dfg~~~~~~-  188 (309)
                      ||++|+|.+++..  ...+++..+..++.|++.||.||   |+++  |+||||||+|||++. ++.+||+|||+|+... 
T Consensus       110 y~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~yl---H~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~  184 (290)
T 3fpq_A          110 LMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFL---HTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  184 (290)
T ss_dssp             CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHH---HTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             CCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence            9999999999976  57899999999999999999999   5556  999999999999985 7899999999997443 


Q ss_pred             ----ccCCCCCCCCCCCCCC-CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHH
Q 021659          189 ----NYATMPHSSCPEDCST-QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKE  263 (309)
Q Consensus       189 ----~~~~~~~~~~PE~~~~-~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  263 (309)
                          ...||+.|+|||...+ +++++|||||||++|||+||+.||.+.............. ..+...+    ... +  
T Consensus       185 ~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~-~~~~~~~----~~~-~--  256 (290)
T 3fpq_A          185 SFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSG-VKPASFD----KVA-I--  256 (290)
T ss_dssp             TSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTT-CCCGGGG----GCC-C--
T ss_pred             CccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcC-CCCCCCC----ccC-C--
Confidence                3479999999997544 5889999999999999999999998765554443332221 1111111    111 1  


Q ss_pred             HHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          264 LKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       264 ~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                       .++.+++.+||+.||++|||+.|+++
T Consensus       257 -~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          257 -PEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             -HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             -HHHHHHHHHHccCChhHCcCHHHHhc
Confidence             23556666999999999999999986

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=9.1e-52  Score=368.20  Aligned_cols=242  Identities=21%  Similarity=0.312  Sum_probs=190.2

Q ss_pred             ccccccCCCceEEEEEEc------CCcEEEEEEecccc-ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeC
Q 021659           43 HRIVYTNSHGAAYKARFQ------DGEVALVKEIQALN-LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNI  114 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~------~~~~va~K~~~~~~-~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~  114 (309)
                      .+.||+|+||.||+|++.      ++..||+|++.... ...++|.+|+++|++|+|||||+++|+|.+ ...++||||+
T Consensus        46 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~  125 (329)
T 4aoj_A           46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYM  125 (329)
T ss_dssp             EEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             EEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            357999999999999863      47889999996433 235679999999999999999999998876 6788999999


Q ss_pred             CCCCHHHhhcCC-------------CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecc
Q 021659          115 ENGSLKEHLNDP-------------LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDV  181 (309)
Q Consensus       115 ~~~sL~~~i~~~-------------~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~df  181 (309)
                      ++|+|.+++...             ...++++.+++.++.|++.||.||   |+++|+||||||+|||++.++.+||+||
T Consensus       126 ~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yL---H~~~iiHRDLKp~NILl~~~~~~Ki~DF  202 (329)
T 4aoj_A          126 RHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDF  202 (329)
T ss_dssp             TTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEEETTTEEEECCC
T ss_pred             CCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHH---hcCCeecccccHhhEEECCCCcEEEccc
Confidence            999999998652             134699999999999999999999   6788999999999999999999999999


Q ss_pred             ccccccc---------ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccc
Q 021659          182 GFFNSVR---------NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHR  249 (309)
Q Consensus       182 g~~~~~~---------~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~  249 (309)
                      |+++...         ...+|+.|+|||...  .++.++|||||||++|||+| |+.||.+.... +.+..... +.   
T Consensus       203 Gla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~-~~~~~i~~-g~---  277 (329)
T 4aoj_A          203 GMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT-EAIDCITQ-GR---  277 (329)
T ss_dssp             C----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH-HHHHHHHH-TC---
T ss_pred             ccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH-HHHHHHHc-CC---
Confidence            9987442         235788999999644  35788999999999999999 89999865432 21211111 11   


Q ss_pred             cccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcc
Q 021659          250 MIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDI  298 (309)
Q Consensus       250 ~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~  298 (309)
                        .+..+...    ...+.+++.+||+.||++|||+.||++.|+.+.+.
T Consensus       278 --~~~~p~~~----~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~  320 (329)
T 4aoj_A          278 --ELERPRAC----PPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA  320 (329)
T ss_dssp             --CCCCCTTC----CHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             --CCCCcccc----cHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence              11122222    23456677799999999999999999999987664

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=3.6e-52  Score=366.11  Aligned_cols=244  Identities=21%  Similarity=0.294  Sum_probs=193.1

Q ss_pred             cccccccCCCceEEEEEEc------CCcEEEEEEeccccc-cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEee
Q 021659           42 FHRIVYTNSHGAAYKARFQ------DGEVALVKEIQALNL-EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~------~~~~va~K~~~~~~~-~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      +.+.||+|+||.||+|++.      ++..||+|++..... ..++|.+|++++++|+|||||+++|+|.+ ...++||||
T Consensus        17 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey   96 (299)
T 4asz_A           17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEY   96 (299)
T ss_dssp             EEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             EeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEc
Confidence            4478999999999999863      478899999964432 34679999999999999999999998875 678899999


Q ss_pred             CCCCCHHHhhcCC-----------CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccc
Q 021659          114 IENGSLKEHLNDP-----------LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVG  182 (309)
Q Consensus       114 ~~~~sL~~~i~~~-----------~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg  182 (309)
                      +++|+|.+++...           ....+++.++..++.|+++||.||   |+++|+||||||+|||++.++.+||+|||
T Consensus        97 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yL---H~~~iiHRDlKp~NILl~~~~~~Ki~DFG  173 (299)
T 4asz_A           97 MKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFG  173 (299)
T ss_dssp             CTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECGGGCEEECCCS
T ss_pred             CCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCccCHhhEEECCCCcEEECCcc
Confidence            9999999999642           245799999999999999999999   67899999999999999999999999999


Q ss_pred             cccccc---------ccCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhccccccccc
Q 021659          183 FFNSVR---------NYATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRM  250 (309)
Q Consensus       183 ~~~~~~---------~~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~  250 (309)
                      +++...         ...+|+.|+|||..  ..++.++|||||||++|||+| |+.||.+.... +.+.... .+..   
T Consensus       174 la~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~-~~~~~i~-~~~~---  248 (299)
T 4asz_A          174 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-EVIECIT-QGRV---  248 (299)
T ss_dssp             CHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-HHHHHHH-HTCC---
T ss_pred             cceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHH-cCCC---
Confidence            986432         12477899999964  445889999999999999998 89999865432 2221111 1111   


Q ss_pred             ccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccc
Q 021659          251 IDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQ  299 (309)
Q Consensus       251 ~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~  299 (309)
                        +..+...    ...+.+++.+||+.||++|||+.||++.|+++....
T Consensus       249 --~~~p~~~----~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~  291 (299)
T 4asz_A          249 --LQRPRTC----PQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKAS  291 (299)
T ss_dssp             --CCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred             --CCCCccc----hHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence              1111222    235667777999999999999999999999876543

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.9e-51  Score=367.14  Aligned_cols=233  Identities=21%  Similarity=0.266  Sum_probs=184.5

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~s  118 (309)
                      +.||+|+||.||+|+. .+|+.||+|++.....   ..+.+.+|++++++|+|||||++++++. +...|+|||||++|+
T Consensus        30 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg~  109 (350)
T 4b9d_A           30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGD  109 (350)
T ss_dssp             EEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCCc
Confidence            5899999999999997 4689999999964433   3457899999999999999999999765 478899999999999


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccC
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYA  191 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~  191 (309)
                      |.+++.......+++..++.++.|++.||.||   |+++|+||||||+|||++.++.+||+|||+++...       ...
T Consensus       110 L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~yl---H~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~  186 (350)
T 4b9d_A          110 LFKRINAQKGVLFQEDQILDWFVQICLALKHV---HDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACI  186 (350)
T ss_dssp             HHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH---HHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHHHHHH
T ss_pred             HHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCcccccccC
Confidence            99999765467789999999999999999999   77899999999999999999999999999997653       236


Q ss_pred             CCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHH
Q 021659          192 TMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLA  269 (309)
Q Consensus       192 ~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~  269 (309)
                      ||+.|+|||...+  ++.++|||||||++|||+||+.||.+...........  .+..     +.+....    ..++.+
T Consensus       187 GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~--~~~~-----~~~~~~~----s~~~~~  255 (350)
T 4b9d_A          187 GTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKII--SGSF-----PPVSLHY----SYDLRS  255 (350)
T ss_dssp             SCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH--HTCC-----CCCCTTS----CHHHHH
T ss_pred             CCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHH--cCCC-----CCCCccC----CHHHHH
Confidence            9999999997543  5789999999999999999999998764332222111  1111     1111122    234556


Q ss_pred             HHHHccCCCCCCCCChHHHHH
Q 021659          270 VARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       270 l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ++.+||++||++|||+.|+++
T Consensus       256 li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          256 LVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHccCChhHCcCHHHHhc
Confidence            666999999999999999985

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=4.8e-51  Score=362.84  Aligned_cols=234  Identities=17%  Similarity=0.162  Sum_probs=188.3

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCHHH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLKE  121 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL~~  121 (309)
                      ++||+|+||.||+|+. .+|+.||+|++.....    ..+|+.++++|+|||||++++++. +...|+||||+++|+|.+
T Consensus        64 ~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~  139 (336)
T 4g3f_A           64 PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ  139 (336)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHH
T ss_pred             cEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHH
Confidence            4799999999999997 4589999999965432    246999999999999999999775 478899999999999999


Q ss_pred             hhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCC-ceeEeccccccccc------------
Q 021659          122 HLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENF-TAKLSDVGFFNSVR------------  188 (309)
Q Consensus       122 ~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~-~~kl~dfg~~~~~~------------  188 (309)
                      ++..  ...+++..+..++.|++.||.||   |+++|+||||||+|||++.++ .+||+|||+++...            
T Consensus       140 ~l~~--~~~l~e~~~~~~~~qi~~aL~yl---H~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~  214 (336)
T 4g3f_A          140 LIKQ--MGCLPEDRALYYLGQALEGLEYL---HTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD  214 (336)
T ss_dssp             HHHH--HSSCCHHHHHHHHHHHHHHHHHH---HTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------------C
T ss_pred             HHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCC
Confidence            9976  56799999999999999999999   788999999999999999987 59999999997542            


Q ss_pred             ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCcc--HHHHHHHhcccccccccccCcCCCCCCHHHH
Q 021659          189 NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVD--LIQWIQESSISSSIHRMIDPDLGGSYDSKEL  264 (309)
Q Consensus       189 ~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  264 (309)
                      ...||+.|+|||...  .++.++|||||||++|||+||+.||.+...  +...+...  ....     +.++...    .
T Consensus       215 ~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~--~~~~-----~~~~~~~----s  283 (336)
T 4g3f_A          215 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASE--PPPI-----REIPPSC----A  283 (336)
T ss_dssp             CCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHS--CCGG-----GGSCTTS----C
T ss_pred             ccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcC--CCCc-----hhcCccC----C
Confidence            135899999999644  357899999999999999999999976432  22222211  1111     1111122    2


Q ss_pred             HHHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          265 KKLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       265 ~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                      ..+.+++.+||++||++|||+.|+++.|...+.
T Consensus       284 ~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~  316 (336)
T 4g3f_A          284 PLTAQAIQEGLRKEPVHRASAMELRRKVGKALQ  316 (336)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence            345566669999999999999999988876653

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=2.6e-51  Score=362.13  Aligned_cols=251  Identities=17%  Similarity=0.207  Sum_probs=190.7

Q ss_pred             ccccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-----CeeEEEEeeCCCC
Q 021659           43 HRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-----RKRLLVFDNIENG  117 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-----~~~~lv~e~~~~~  117 (309)
                      .+.||+|+||+||+|++ .|+.||+|++.........+..|+..+.+++||||++++|++.+     ...|+||||+++|
T Consensus         8 ~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~g   86 (303)
T 3hmm_A            8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHG   86 (303)
T ss_dssp             EEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTC
T ss_pred             EEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCC
Confidence            46899999999999998 58899999996544322333456666678899999999998753     2468999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhc-----CCCCeeecccCCCceeeCCCCceeEeccccccccc----
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLF-----SNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----  188 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~-----h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----  188 (309)
                      +|.+++..   ..+++..+.+++.|++.||+|||+.     |..+|+||||||+|||++.++.+||+|||+++...    
T Consensus        87 sL~~~l~~---~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~  163 (303)
T 3hmm_A           87 SLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD  163 (303)
T ss_dssp             BHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTT
T ss_pred             cHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCC
Confidence            99999975   5699999999999999999999753     35599999999999999999999999999986442    


Q ss_pred             -------ccCCCCCCCCCCCCCC--------CCCCCcEeehhhHHHHHHhCCCCCCCCcc-------------HHHHHHH
Q 021659          189 -------NYATMPHSSCPEDCST--------QDCSNIIFQLGVLILELVTGQSPEEGDVD-------------LIQWIQE  240 (309)
Q Consensus       189 -------~~~~~~~~~~PE~~~~--------~~~~~Dv~slG~~l~~l~tg~~p~~~~~~-------------~~~~~~~  240 (309)
                             ...||+.|+|||...+        ++.++|||||||++|||+||..||.....             ....+..
T Consensus       164 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  243 (303)
T 3hmm_A          164 TIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRK  243 (303)
T ss_dssp             EESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHH
T ss_pred             ceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHH
Confidence                   2358999999997543        24679999999999999999877642211             0111111


Q ss_pred             hcccccccccccCcCCCCC-CHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccccc
Q 021659          241 SSISSSIHRMIDPDLGGSY-DSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCY  301 (309)
Q Consensus       241 ~~~~~~~~~~~~~~l~~~~-~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~~  301 (309)
                      ..    .....+|.++... +.+....+.+++.+||+.||+.|||+.||++.|+++.+-+..
T Consensus       244 ~~----~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~~i  301 (303)
T 3hmm_A          244 VV----CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGI  301 (303)
T ss_dssp             HH----TTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC---
T ss_pred             HH----hcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHcCC
Confidence            11    1112233333222 234567788888999999999999999999999988766543

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.4e-50  Score=360.96  Aligned_cols=232  Identities=20%  Similarity=0.282  Sum_probs=188.3

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc-ccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN-LEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~-~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL~  120 (309)
                      +.||+|+||.||+|+.. +|+.||+|++.... ...+.+.+|+++|++++|||||++++++. +...|+|||||++|+|.
T Consensus        80 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~  159 (346)
T 4fih_A           80 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT  159 (346)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHH
T ss_pred             EEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHH
Confidence            47999999999999974 68999999995433 33456889999999999999999999665 57889999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccCCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYATM  193 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~~~  193 (309)
                      +++..   ..+++..+..++.|++.||.||   |+++|+||||||+|||++.++.+||+|||+++...       ...||
T Consensus       160 ~~l~~---~~l~e~~~~~~~~qi~~aL~yl---H~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT  233 (346)
T 4fih_A          160 DIVTH---TRMNEEQIAAVCLAVLQALSVL---HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGT  233 (346)
T ss_dssp             HHHHH---SCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSC
T ss_pred             HHHHc---CCCCHHHHHHHHHHHHHHHHHH---HHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccccccC
Confidence            99975   5699999999999999999999   77899999999999999999999999999987542       34789


Q ss_pred             CCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHH
Q 021659          194 PHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVA  271 (309)
Q Consensus       194 ~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~  271 (309)
                      +.|+|||...  .++.++|||||||++|||++|+.||.+............  .     ..+.+..  ......++.+++
T Consensus       234 p~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~--~-----~~~~~~~--~~~~s~~~~dli  304 (346)
T 4fih_A          234 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD--N-----LPPRLKN--LHKVSPSLKGFL  304 (346)
T ss_dssp             GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH--S-----SCCCCSC--GGGSCHHHHHHH
T ss_pred             cCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHc--C-----CCCCCCc--cccCCHHHHHHH
Confidence            9999999743  458899999999999999999999987654332211110  1     0111110  011123455666


Q ss_pred             HHccCCCCCCCCChHHHHH
Q 021659          272 RLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       272 ~~cl~~dp~~Rps~~evl~  290 (309)
                      .+||++||++|||+.|+++
T Consensus       305 ~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          305 DRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             HHHSCSSTTTSCCHHHHTT
T ss_pred             HHHcCCChhHCcCHHHHhc
Confidence            6999999999999999986

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=1e-50  Score=356.82  Aligned_cols=229  Identities=17%  Similarity=0.211  Sum_probs=187.5

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccc----cccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQAL----NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~----~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||+||+|+. .+++.||+|++...    ....+.+.+|+++|++|+||||+++++++.+ ...|+||||+++|
T Consensus        38 ~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~gG  117 (311)
T 4aw0_A           38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG  117 (311)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTE
T ss_pred             EEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCC
Confidence            6899999999999997 56899999999542    2345679999999999999999999997755 7889999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---------
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---------  188 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---------  188 (309)
                      +|.+++..  .+.+++..+..++.|++.||.||   |+++|+||||||+|||++.++.+||+|||+++...         
T Consensus       118 ~L~~~i~~--~~~l~e~~~~~~~~qi~~al~yl---H~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~  192 (311)
T 4aw0_A          118 ELLKYIRK--IGSFDETCTRFYTAEIVSALEYL---HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN  192 (311)
T ss_dssp             EHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCBC
T ss_pred             CHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCccccc
Confidence            99999976  57899999999999999999999   77899999999999999999999999999997542         


Q ss_pred             ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          189 NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       189 ~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                      ...||+.|+|||...  .++.++|||||||++|+|+||+.||.+..............        ...+...+    .+
T Consensus       193 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~--------~~~p~~~s----~~  260 (311)
T 4aw0_A          193 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLE--------YDFPEKFF----PK  260 (311)
T ss_dssp             CCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC--------CCCCTTCC----HH
T ss_pred             CcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC--------CCCCcccC----HH
Confidence            346899999999753  45789999999999999999999998654322211111111        11222222    34


Q ss_pred             HHHHHHHccCCCCCCCCChHHHH
Q 021659          267 LLAVARLCIKTKDKPTISIPQIS  289 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rps~~evl  289 (309)
                      +.+++.+||++||++|||+.|++
T Consensus       261 ~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          261 ARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             HHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             HHHHHHHHccCCHhHCcChHHHc
Confidence            45666699999999999999863

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=3.9e-50  Score=348.19  Aligned_cols=230  Identities=17%  Similarity=0.208  Sum_probs=177.5

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      .+.||+|+||.||+|+. .+++.||+|++....    ...+.+.+|++++++++||||+++++++.+ ...|+||||+ +
T Consensus        18 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~   96 (275)
T 3hyh_A           18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-G   96 (275)
T ss_dssp             EEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-C
T ss_pred             EEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-C
Confidence            36899999999999996 468999999995432    224578999999999999999999997765 7788999999 5


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------cc
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------NY  190 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------~~  190 (309)
                      |+|.+++..  ...+++..+..++.|++.||+||   |+++|+||||||+|||++.++.+||+|||+++...      ..
T Consensus        97 g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~yl---H~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~  171 (275)
T 3hyh_A           97 NELFDYIVQ--RDKMSEQEARRFFQQIISAVEYC---HRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS  171 (275)
T ss_dssp             EEHHHHHHH--SCSCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCTTTEEECTTCCEEECCSSCC------------
T ss_pred             CCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCccCCe
Confidence            799999876  57899999999999999999999   77899999999999999999999999999997543      35


Q ss_pred             CCCCCCCCCCCCCCC---CCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          191 ATMPHSSCPEDCSTQ---DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       191 ~~~~~~~~PE~~~~~---~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      .||+.|+|||...+.   ++++|||||||++|+|+||+.||.+... ......... +.      ..++...+    .++
T Consensus       172 ~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~-~~~~~~i~~-~~------~~~p~~~s----~~~  239 (275)
T 3hyh_A          172 CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-PVLFKNISN-GV------YTLPKFLS----PGA  239 (275)
T ss_dssp             ---CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHH-TC------CCCCTTSC----HHH
T ss_pred             eECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHc-CC------CCCCCCCC----HHH
Confidence            789999999975432   5689999999999999999999986532 222221111 11      11112222    344


Q ss_pred             HHHHHHccCCCCCCCCChHHHHH
Q 021659          268 LAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .+++.+||++||++|||+.|+++
T Consensus       240 ~~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          240 AGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHccCChhHCcCHHHHHc
Confidence            56666999999999999999986

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=1.2e-49  Score=363.27  Aligned_cols=235  Identities=20%  Similarity=0.287  Sum_probs=190.0

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc-ccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN-LEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~-~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL~  120 (309)
                      +.||+|+||.||+|+. .+|+.||+|++.... ...+.+.+|+.+|++|+|||||++++++. +...|+|||||++|+|.
T Consensus       157 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~  236 (423)
T 4fie_A          157 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT  236 (423)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHH
T ss_pred             eEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcHH
Confidence            5799999999999997 468999999995433 33457899999999999999999999665 57889999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccCCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYATM  193 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~~~  193 (309)
                      +++..   ..+++..+..++.|++.||.||   |+++|+||||||+|||++.++.+||+|||++....       ...||
T Consensus       237 ~~i~~---~~l~e~~~~~~~~qil~aL~yl---H~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT  310 (423)
T 4fie_A          237 DIVTH---TRMNEEQIAAVCLAVLQALSVL---HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGT  310 (423)
T ss_dssp             HHHHH---SCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCCEEC
T ss_pred             HHHhc---cCCCHHHHHHHHHHHHHHHHHH---HHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccccccC
Confidence            99974   5699999999999999999999   77899999999999999999999999999987542       34689


Q ss_pred             CCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCC-CCCHHHHHHHHHH
Q 021659          194 PHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGG-SYDSKELKKLLAV  270 (309)
Q Consensus       194 ~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~l~~l  270 (309)
                      +.|+|||...  .++.++|||||||++|||++|+.||.+...........  ..     ..+.+.. ..-   ...+.++
T Consensus       311 p~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~--~~-----~~~~~~~~~~~---s~~~~dl  380 (423)
T 4fie_A          311 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR--DN-----LPPRLKNLHKV---SPSLKGF  380 (423)
T ss_dssp             TTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH--HS-----CCCCCSCTTSS---CHHHHHH
T ss_pred             cCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHH--cC-----CCCCCcccccC---CHHHHHH
Confidence            9999999753  35889999999999999999999998765433222111  11     1111111 111   2345566


Q ss_pred             HHHccCCCCCCCCChHHHHH--HHhh
Q 021659          271 ARLCIKTKDKPTISIPQISR--YLQN  294 (309)
Q Consensus       271 ~~~cl~~dp~~Rps~~evl~--~L~~  294 (309)
                      +.+||+.||++|||+.|+++  .|.+
T Consensus       381 i~~~L~~dP~~R~ta~ell~Hp~~~~  406 (423)
T 4fie_A          381 LDRLLVRDPAQRATAAELLKHPFLAK  406 (423)
T ss_dssp             HHHHSCSSTTTSCCHHHHTTCGGGGG
T ss_pred             HHHHcCCChhHCcCHHHHhcCHHhcC
Confidence            66999999999999999986  4554

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=8.4e-50  Score=350.70  Aligned_cols=231  Identities=18%  Similarity=0.228  Sum_probs=180.0

Q ss_pred             ccccccCCCceEEEEEE----cCCcEEEEEEecccc---ccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeC
Q 021659           43 HRIVYTNSHGAAYKARF----QDGEVALVKEIQALN---LEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNI  114 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~----~~~~~va~K~~~~~~---~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~  114 (309)
                      .+.||+|+||+||+|+.    ..++.||+|++....   .....+.+|++++++++||||+++++++. +...|+||||+
T Consensus        29 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~  108 (304)
T 3ubd_A           29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFL  108 (304)
T ss_dssp             EEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEECCC
T ss_pred             EEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcC
Confidence            36899999999999986    246889999995432   22346889999999999999999999765 57889999999


Q ss_pred             CCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc-------
Q 021659          115 ENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-------  187 (309)
Q Consensus       115 ~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-------  187 (309)
                      ++|+|.+++..  ...+++..+..++.|++.||.||   |+++|+||||||+|||++.++.+||+|||+++..       
T Consensus       109 ~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~yl---H~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~  183 (304)
T 3ubd_A          109 RGGDLFTRLSK--EVMFTEEDVKFYLAELALALDHL---HSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA  183 (304)
T ss_dssp             TTCEEHHHHHH--HCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----CCC
T ss_pred             CCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCCccc
Confidence            99999999976  57899999999999999999999   7789999999999999999999999999999743       


Q ss_pred             cccCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHH
Q 021659          188 RNYATMPHSSCPEDC--STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELK  265 (309)
Q Consensus       188 ~~~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  265 (309)
                      ....||+.|+|||..  ..++.++|||||||++|||+||+.||.+..............        ...+...+    .
T Consensus       184 ~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~--------~~~p~~~s----~  251 (304)
T 3ubd_A          184 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK--------LGMPQFLS----P  251 (304)
T ss_dssp             CSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--------CCCCTTSC----H
T ss_pred             cccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCC--------CCCCCcCC----H
Confidence            234789999999964  345789999999999999999999998754332221111111        11112222    3


Q ss_pred             HHHHHHHHccCCCCCCCCCh-----HHHHH
Q 021659          266 KLLAVARLCIKTKDKPTISI-----PQISR  290 (309)
Q Consensus       266 ~l~~l~~~cl~~dp~~Rps~-----~evl~  290 (309)
                      ++.+++.+||++||++|||+     +|+++
T Consensus       252 ~~~~li~~~L~~dP~~R~ta~~~~~~eil~  281 (304)
T 3ubd_A          252 EAQSLLRMLFKRNPANRLGAGPDGVEEIKR  281 (304)
T ss_dssp             HHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred             HHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence            45566669999999999985     56663

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=1.5e-49  Score=356.82  Aligned_cols=244  Identities=16%  Similarity=0.206  Sum_probs=191.7

Q ss_pred             ccccccCCCceEEEEEEcC------CcEEEEEEeccccc--cHHHHHHHHHHHccCCC-CCcceEeeeEeC--CeeEEEE
Q 021659           43 HRIVYTNSHGAAYKARFQD------GEVALVKEIQALNL--EKDAFYREIQLLGRLHH-RHLLALQGFSTG--RKRLLVF  111 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~------~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h-~niv~~~~~~~~--~~~~lv~  111 (309)
                      .+.||+|+||.||+|.+..      ++.||+|.+.....  ..+.|.+|+++|.+++| ||||+++|+|..  ...++||
T Consensus        69 ~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~  148 (353)
T 4ase_A           69 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV  148 (353)
T ss_dssp             EEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEE
T ss_pred             eeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEE
Confidence            3689999999999998642      35799999864332  34579999999999965 899999998854  4578999


Q ss_pred             eeCCCCCHHHhhcCC--------------CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCcee
Q 021659          112 DNIENGSLKEHLNDP--------------LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAK  177 (309)
Q Consensus       112 e~~~~~sL~~~i~~~--------------~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~k  177 (309)
                      |||++|+|.+++...              ....+++..+..++.|+++||.||   |+++|+||||||+|||++.++.+|
T Consensus       149 Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yL---H~~~iiHRDLK~~NILl~~~~~vK  225 (353)
T 4ase_A          149 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVK  225 (353)
T ss_dssp             ECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECGGGCEE
T ss_pred             EcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhH---hhCCeecCccCccceeeCCCCCEE
Confidence            999999999999642              134589999999999999999999   778999999999999999999999


Q ss_pred             Eeccccccccc---------ccCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccc
Q 021659          178 LSDVGFFNSVR---------NYATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISS  245 (309)
Q Consensus       178 l~dfg~~~~~~---------~~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~  245 (309)
                      |+|||+++...         ...+|+.|+|||..  ..++.++|||||||++|||+| |+.||.+............ .+
T Consensus       226 i~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~-~g  304 (353)
T 4ase_A          226 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK-EG  304 (353)
T ss_dssp             ECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH-HT
T ss_pred             ECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHH-cC
Confidence            99999997542         22467889999964  345889999999999999998 8999986432222211111 11


Q ss_pred             cccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccc
Q 021659          246 SIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQ  299 (309)
Q Consensus       246 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~  299 (309)
                      .     .+..+...    ..++.+++.+||+.||++|||+.||++.|+++++..
T Consensus       305 ~-----~~~~p~~~----~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~  349 (353)
T 4ase_A          305 T-----RMRAPDYT----TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  349 (353)
T ss_dssp             C-----CCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             C-----CCCCCccC----CHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHh
Confidence            1     11122222    234566777999999999999999999999887643

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=7.1e-48  Score=339.04  Aligned_cols=231  Identities=15%  Similarity=0.212  Sum_probs=175.7

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC-C------------ee
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG-R------------KR  107 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~------------~~  107 (309)
                      +.||+|+||.||+|+. .+++.||+|++.....  ..+.+.+|++++++|+|||||++++++.+ .            ..
T Consensus        11 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l   90 (299)
T 4g31_A           11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYL   90 (299)
T ss_dssp             EEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEE
T ss_pred             eEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEE
Confidence            6899999999999997 4689999999964332  34578999999999999999999996542 1            35


Q ss_pred             EEEEeeCCCCCHHHhhcCCCC-CCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccc
Q 021659          108 LLVFDNIENGSLKEHLNDPLK-TPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNS  186 (309)
Q Consensus       108 ~lv~e~~~~~sL~~~i~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~  186 (309)
                      |+||||+++|+|.+++..... ...++..+..++.|++.||+||   |+++|+||||||+|||++.++.+||+|||+++.
T Consensus        91 ~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~yl---H~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~  167 (299)
T 4g31_A           91 YIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFL---HSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTA  167 (299)
T ss_dssp             EEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTCCEEECCCCCC--
T ss_pred             EEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHH---HHCcCccccCcHHHeEECCCCcEEEccCcccee
Confidence            899999999999999986322 3455677899999999999999   778999999999999999999999999999875


Q ss_pred             ccc-------------------cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccc
Q 021659          187 VRN-------------------YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISS  245 (309)
Q Consensus       187 ~~~-------------------~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~  245 (309)
                      ...                   ..||+.|+|||...  .++.++|||||||++|||++   ||.+..+....+.... ..
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~~~-~~  243 (299)
T 4g31_A          168 MDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVR-NL  243 (299)
T ss_dssp             ------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHH-TT
T ss_pred             cCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHHHh-cC
Confidence            431                   35899999999644  35789999999999999996   7765433322222111 11


Q ss_pred             cccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          246 SIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       246 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ..+..         .......+.+++.+||++||++|||+.|+++
T Consensus       244 ~~p~~---------~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          244 KFPPL---------FTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             CCCHH---------HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCCC---------CcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            11100         1122334556777999999999999999986

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.4e-46  Score=341.38  Aligned_cols=245  Identities=16%  Similarity=0.219  Sum_probs=189.2

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccccc---HHHHHHHHHHHccCCCCCcceEeeeEeC-------CeeEEEEe
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLE---KDAFYREIQLLGRLHHRHLLALQGFSTG-------RKRLLVFD  112 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~h~niv~~~~~~~~-------~~~~lv~e  112 (309)
                      +.||+|+||.||+|+. .+|+.||+|++......   .+.+.+|+++|++|+||||+++++++..       ...|+|||
T Consensus        60 ~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE  139 (398)
T 4b99_A           60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLD  139 (398)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEE
T ss_pred             EEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEEe
Confidence            5899999999999997 46899999999644332   3568899999999999999999997642       46799999


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc-----
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-----  187 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-----  187 (309)
                      |++ |+|.+++..  .+.+++..+..++.|++.||.||   |+++|+||||||+|||++.++.+||+|||+++..     
T Consensus       140 ~~~-g~L~~~i~~--~~~l~~~~~~~~~~qil~al~yl---H~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~  213 (398)
T 4b99_A          140 LME-SDLHQIIHS--SQPLTLEHVRYFLYQLLRGLKYM---HSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPA  213 (398)
T ss_dssp             CCS-EEHHHHHTS--SSCCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-----
T ss_pred             CCC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCcCcCCCcCccccccCCCCCEEEeecceeeecccCcc
Confidence            996 589999987  67899999999999999999999   7789999999999999999999999999998643     


Q ss_pred             ------cccCCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccC-----
Q 021659          188 ------RNYATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDP-----  253 (309)
Q Consensus       188 ------~~~~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-----  253 (309)
                            ....||+.|+|||...+   ++.++||||+||++|||++|+.||.+.....+........+........     
T Consensus       214 ~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~  293 (398)
T 4b99_A          214 EHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAE  293 (398)
T ss_dssp             --CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----
T ss_pred             ccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhh
Confidence                  23478999999996433   4788999999999999999999998765544332211111110000000     


Q ss_pred             -------cCC--CCCCH-----HHHHHHHHHHHHccCCCCCCCCChHHHHH--HHhh
Q 021659          254 -------DLG--GSYDS-----KELKKLLAVARLCIKTKDKPTISIPQISR--YLQN  294 (309)
Q Consensus       254 -------~l~--~~~~~-----~~~~~l~~l~~~cl~~dp~~Rps~~evl~--~L~~  294 (309)
                             .+.  .....     ....++.+|+.+||+.||++|||+.|+++  .+.+
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~  350 (398)
T 4b99_A          294 RVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK  350 (398)
T ss_dssp             CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTT
T ss_pred             hhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCc
Confidence                   000  00000     11234566777999999999999999985  4544

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=1.9e-45  Score=327.63  Aligned_cols=276  Identities=29%  Similarity=0.522  Sum_probs=230.9

Q ss_pred             ccccccCHHHHHHhhcccc--cccccCCCceEEEEEEcCCcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEee
Q 021659           25 CFIRRFSYKDIKMATDGFH--RIVYTNSHGAAYKARFQDGEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQG  100 (309)
Q Consensus        25 ~~~~~~~~~~i~~~~~~~~--~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~  100 (309)
                      ...+.|++.++...+++|.  +.||+|+||.||+|...+++.||+|++.....  ....+.+|++++++++||||+++++
T Consensus        15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~   94 (326)
T 3uim_A           15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG   94 (326)
T ss_dssp             CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred             CccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEE
Confidence            4567899999999999997  58999999999999987899999999854332  2336899999999999999999999


Q ss_pred             eEeC-CeeEEEEeeCCCCCHHHhhcCC--CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCcee
Q 021659          101 FSTG-RKRLLVFDNIENGSLKEHLNDP--LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAK  177 (309)
Q Consensus       101 ~~~~-~~~~lv~e~~~~~sL~~~i~~~--~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~k  177 (309)
                      ++.. ...++||||+++++|.+++...  ....+++..+..++.+++.||.|||..+..+++||||||+||+++.++.+|
T Consensus        95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k  174 (326)
T 3uim_A           95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV  174 (326)
T ss_dssp             EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred             EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence            8765 6778999999999999999764  234599999999999999999999655455999999999999999999999


Q ss_pred             Eeccccccccc--------ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCC-------CCccHHHHHHH
Q 021659          178 LSDVGFFNSVR--------NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEE-------GDVDLIQWIQE  240 (309)
Q Consensus       178 l~dfg~~~~~~--------~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~-------~~~~~~~~~~~  240 (309)
                      |+|||++....        ...+|+.|+|||...  ..+.++||||||+++|+|++|+.||.       .......++..
T Consensus       175 l~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  254 (326)
T 3uim_A          175 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG  254 (326)
T ss_dssp             ECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTT
T ss_pred             eccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHH
Confidence            99999987543        224788999999643  34788999999999999999999995       23344555555


Q ss_pred             hcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcccc
Q 021659          241 SSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQC  300 (309)
Q Consensus       241 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~  300 (309)
                      .........+.+..+...........+.+++.+||+.||++|||+.||++.|++..-.+.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~~~  314 (326)
T 3uim_A          255 LLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAER  314 (326)
T ss_dssp             TTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCSSS
T ss_pred             HhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchhhh
Confidence            555666677777777777888889999999999999999999999999999997554443

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=2.1e-45  Score=331.47  Aligned_cols=180  Identities=17%  Similarity=0.218  Sum_probs=154.9

Q ss_pred             cccccCCCceEEEEEEc----CCcEEEEEEeccccccHHHHHHHHHHHccC-CCCCcceEeeeEe-CCeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ----DGEVALVKEIQALNLEKDAFYREIQLLGRL-HHRHLLALQGFST-GRKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~----~~~~va~K~~~~~~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~-~~~~~lv~e~~~~~  117 (309)
                      +.||+|+||+||+|+.+    .++.||+|.+.... ...++.+|+++|+.+ +||||+++++++. +.+.|+||||+++|
T Consensus        27 ~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g~  105 (361)
T 4f9c_A           27 DKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHE  105 (361)
T ss_dssp             EEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCCC
T ss_pred             EEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCcc
Confidence            68999999999999853    46789999885433 456788999999998 6999999999665 57889999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC-CceeEeccccccccc--------
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN-FTAKLSDVGFFNSVR--------  188 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~-~~~kl~dfg~~~~~~--------  188 (309)
                      +|.+++.     .+++.++..++.|++.||.||   |++||+||||||+|||++.+ +.+||+|||+|+...        
T Consensus       106 ~L~~~~~-----~l~~~~~~~~~~qll~al~yl---H~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~  177 (361)
T 4f9c_A          106 SFLDILN-----SLSFQEVREYMLNLFKALKRI---HQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLK  177 (361)
T ss_dssp             CHHHHHT-----TCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGG
T ss_pred             cHHHHHc-----CCCHHHHHHHHHHHHHHHHHH---HHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccccccc
Confidence            9999985     389999999999999999999   78899999999999999876 799999999986332        


Q ss_pred             ---------------------------ccCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCc
Q 021659          189 ---------------------------NYATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDV  232 (309)
Q Consensus       189 ---------------------------~~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~  232 (309)
                                                 ...||+.|+|||...   .++.++||||+||++|+|++|+.||....
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~  251 (361)
T 4f9c_A          178 FVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS  251 (361)
T ss_dssp             GC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred             cccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCC
Confidence                                       235899999999643   35788999999999999999999996543

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=4.7e-45  Score=324.69  Aligned_cols=270  Identities=26%  Similarity=0.431  Sum_probs=221.8

Q ss_pred             ccCHHHHHHhhcccc--cccccCCCceEEEEEEcCCcEEEEEEecccc-ccHHHHHHHHHHHccCCCCCcceEeeeEeC-
Q 021659           29 RFSYKDIKMATDGFH--RIVYTNSHGAAYKARFQDGEVALVKEIQALN-LEKDAFYREIQLLGRLHHRHLLALQGFSTG-  104 (309)
Q Consensus        29 ~~~~~~i~~~~~~~~--~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~-~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-  104 (309)
                      .+++.++...+++|.  +.||+|+||.||+|...+++.||+|.+.... ...+.+.+|++++++++||||+++++++.+ 
T Consensus        28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  107 (321)
T 2qkw_B           28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER  107 (321)
T ss_dssp             --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred             eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence            344455556667776  4899999999999998889999999885433 335678999999999999999999998765 


Q ss_pred             CeeEEEEeeCCCCCHHHhhcCCC--CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccc
Q 021659          105 RKRLLVFDNIENGSLKEHLNDPL--KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVG  182 (309)
Q Consensus       105 ~~~~lv~e~~~~~sL~~~i~~~~--~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg  182 (309)
                      ...++||||+++++|.+++....  ...+++..++.++.+++.||.||   |+.+++||||||+||+++.++.+||+|||
T Consensus       108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~kl~Dfg  184 (321)
T 2qkw_B          108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL---HTRAIIHRDVKSINILLDENFVPKITDFG  184 (321)
T ss_dssp             TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCSTTEEECTTCCEEECCCT
T ss_pred             CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHh---cCCCeecCCCCHHHEEECCCCCEEEeecc
Confidence            67889999999999999997532  34699999999999999999999   67899999999999999999999999999


Q ss_pred             ccccccc---------cCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHhCCCCCCCCc-----cHHHHHHHhccccc
Q 021659          183 FFNSVRN---------YATMPHSSCPEDC--STQDCSNIIFQLGVLILELVTGQSPEEGDV-----DLIQWIQESSISSS  246 (309)
Q Consensus       183 ~~~~~~~---------~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~-----~~~~~~~~~~~~~~  246 (309)
                      ++.....         ..+++.|+|||..  ...+.++||||||+++|+|++|+.||....     ....+.......+.
T Consensus       185 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  264 (321)
T 2qkw_B          185 ISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ  264 (321)
T ss_dssp             TCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTC
T ss_pred             cccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccccc
Confidence            9864321         2367889999964  345788999999999999999999986432     23333333344455


Q ss_pred             ccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccccc
Q 021659          247 IHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCY  301 (309)
Q Consensus       247 ~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~~  301 (309)
                      ....+++.+...........+.+++.+||+.||++|||+.|+++.|++++..+..
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~~~  319 (321)
T 2qkw_B          265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQES  319 (321)
T ss_dssp             CCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSCC
T ss_pred             HHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcccC
Confidence            5666777776677788889999999999999999999999999999999887653

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=4e-44  Score=341.27  Aligned_cols=235  Identities=17%  Similarity=0.183  Sum_probs=188.5

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc-ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN-LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~-~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      +.||+|+||.||+|.. .+|+.||+|.+.... .+.+.+.+|+++|++|+||||+++++++.+ ...|+||||+++|+|.
T Consensus       163 ~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~  242 (573)
T 3uto_A          163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELF  242 (573)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBHH
T ss_pred             EEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcHH
Confidence            6899999999999997 468999999985433 335678899999999999999999997765 7888999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC--CceeEeccccccccc------ccCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN--FTAKLSDVGFFNSVR------NYAT  192 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~--~~~kl~dfg~~~~~~------~~~~  192 (309)
                      +++... ...+++..+..++.|++.||.||   |+++|+||||||+|||++.+  +.+||+|||+++...      ...|
T Consensus       243 ~~i~~~-~~~l~e~~~~~~~~qi~~al~yl---H~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~~~~G  318 (573)
T 3uto_A          243 EKVADE-HNKMSEDEAVEYMRQVCKGLCHM---HENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTG  318 (573)
T ss_dssp             HHHTCT-TSCEEHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEEEECS
T ss_pred             HHHHHh-CCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCceeeeEE
Confidence            998652 45799999999999999999999   77899999999999999854  899999999997653      3468


Q ss_pred             CCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          193 MPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       193 ~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      |+.|+|||...+  ++.++|||||||++|+|++|+.||.+......................+    ..    ...+.+|
T Consensus       319 T~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~----~~----s~~~~dl  390 (573)
T 3uto_A          319 TAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFS----GI----SEDGKDF  390 (573)
T ss_dssp             SGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGT----TS----CHHHHHH
T ss_pred             CccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCccccc----CC----CHHHHHH
Confidence            999999997443  4788999999999999999999998765433322221111111111111    11    2344566


Q ss_pred             HHHccCCCCCCCCChHHHHH
Q 021659          271 ARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       271 ~~~cl~~dp~~Rps~~evl~  290 (309)
                      +.+||+.||++|||+.|+++
T Consensus       391 i~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          391 IRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             HHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHccCChhHCcCHHHHhc
Confidence            66999999999999999986

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=1.2e-43  Score=338.07  Aligned_cols=230  Identities=18%  Similarity=0.236  Sum_probs=181.1

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHH---HHHHHccCCCCCcceEeeeEeC-CeeEEEEeeC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYR---EIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNI  114 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~---ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~  114 (309)
                      +.||+|+||.||+|+.. +|+.||+|++....    .....+.+   ++.+++.++||||+++++++.+ ...|+||||+
T Consensus       195 k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy~  274 (689)
T 3v5w_A          195 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLM  274 (689)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEecC
Confidence            68999999999999974 58999999995322    22233333   4677788899999999996654 7889999999


Q ss_pred             CCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-----c
Q 021659          115 ENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-----N  189 (309)
Q Consensus       115 ~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-----~  189 (309)
                      +||+|.+++..  .+.+++..+..++.||+.||.||   |+++|+||||||+|||++.+|.+||+|||+|+...     .
T Consensus       275 ~GGdL~~~l~~--~~~l~E~~a~~y~~qIl~aL~yL---H~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~~~t  349 (689)
T 3v5w_A          275 NGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHM---HNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA  349 (689)
T ss_dssp             CSCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCCCCS
T ss_pred             CCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCchHHeEEeCCCCEEecccceeeecCCCCCCC
Confidence            99999999976  57899999999999999999999   88999999999999999999999999999997543     4


Q ss_pred             cCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCc--cHHHHHHHhcccccccccccCcCCCCCCHHHH
Q 021659          190 YATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDV--DLIQWIQESSISSSIHRMIDPDLGGSYDSKEL  264 (309)
Q Consensus       190 ~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  264 (309)
                      ..||+.|+|||...   .++.++|+|||||++|||++|+.||.+..  ........ ....      ....+...+    
T Consensus       350 ~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~-i~~~------~~~~p~~~S----  418 (689)
T 3v5w_A          350 SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM-TLTM------AVELPDSFS----  418 (689)
T ss_dssp             CCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHH-HHHC------CCCCCTTSC----
T ss_pred             ccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh-hcCC------CCCCCccCC----
Confidence            57999999999653   35889999999999999999999997532  11111111 1110      111122222    


Q ss_pred             HHHHHHHHHccCCCCCCCCC-----hHHHH
Q 021659          265 KKLLAVARLCIKTKDKPTIS-----IPQIS  289 (309)
Q Consensus       265 ~~l~~l~~~cl~~dp~~Rps-----~~evl  289 (309)
                      .++.+++.+||+.||++|++     +.|++
T Consensus       419 ~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~  448 (689)
T 3v5w_A          419 PELRSLLEGLLQRDVNRRLGCLGRGAQEVK  448 (689)
T ss_dssp             HHHHHHHHHHTCSCGGGCTTCSSSTHHHHT
T ss_pred             HHHHHHHHHHccCCHhHCCCCCCCCHHHHh
Confidence            34455666999999999998     57776

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=1e-43  Score=314.73  Aligned_cols=250  Identities=21%  Similarity=0.285  Sum_probs=187.6

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEecccccc---HHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLE---KDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      +.||+|+||.||+|+. .+..||+|++......   .+.+.+|++++++++||||+++++++.+ ...++||||+++++|
T Consensus        43 ~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L  121 (309)
T 3p86_A           43 EKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSL  121 (309)
T ss_dssp             EEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCBH
T ss_pred             eEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCcH
Confidence            5899999999999987 5788999998654433   3468899999999999999999998765 678899999999999


Q ss_pred             HHhhcCCC-CCCCCHHHHHHHHHHHHHHHhhhhhcCCCC--eeecccCCCceeeCCCCceeEeccccccccc-------c
Q 021659          120 KEHLNDPL-KTPLDWKTRLQIAIGVAAALEYLLLFSNLP--MYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------N  189 (309)
Q Consensus       120 ~~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~--i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~  189 (309)
                      .+++.... ...+++..++.++.|++.||.||   |+.+  ++||||||+||+++.++.+||+|||++....       .
T Consensus       122 ~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~  198 (309)
T 3p86_A          122 YRLLHKSGAREQLDERRRLSMAYDVAKGMNYL---HNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKS  198 (309)
T ss_dssp             HHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHH---HTSSSCCCCTTCCGGGEEECTTCCEEECCCC--------------
T ss_pred             HHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH---HcCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccccccccccc
Confidence            99997632 12499999999999999999999   7778  9999999999999999999999999986432       3


Q ss_pred             cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          190 YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ..+++.|+|||...+  .+.++||||||+++|+|++|+.||........... ......     ....+...    ...+
T Consensus       199 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~-~~~~~~-----~~~~~~~~----~~~l  268 (309)
T 3p86_A          199 AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAA-VGFKCK-----RLEIPRNL----NPQV  268 (309)
T ss_dssp             ---CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHH-HHHSCC-----CCCCCTTS----CHHH
T ss_pred             CCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHhcCC-----CCCCCccC----CHHH
Confidence            467899999997433  47899999999999999999999986543222111 110000     11111222    2345


Q ss_pred             HHHHHHccCCCCCCCCChHHHHHHHhhhhccccccccccc
Q 021659          268 LAVARLCIKTKDKPTISIPQISRYLQNEVDIQCYKYSRVS  307 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~~~~~~~~  307 (309)
                      .+++.+||+.||++|||+.++++.|+..+....++.++.|
T Consensus       269 ~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~~~~~~  308 (309)
T 3p86_A          269 AAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPNRSD  308 (309)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHC----------
T ss_pred             HHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCCCCccc
Confidence            6677799999999999999999999999998888877655

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=2e-42  Score=305.54  Aligned_cols=268  Identities=27%  Similarity=0.434  Sum_probs=214.7

Q ss_pred             ccccccCHHHHHHhhccccc--------ccccCCCceEEEEEEcCCcEEEEEEeccc-----cccHHHHHHHHHHHccCC
Q 021659           25 CFIRRFSYKDIKMATDGFHR--------IVYTNSHGAAYKARFQDGEVALVKEIQAL-----NLEKDAFYREIQLLGRLH   91 (309)
Q Consensus        25 ~~~~~~~~~~i~~~~~~~~~--------~lg~G~~~~v~~~~~~~~~~va~K~~~~~-----~~~~~~~~~ei~~l~~l~   91 (309)
                      .....|++.++..++++|..        .||+|+||.||+|.. +++.||+|.+...     ....+.+.+|+.++++++
T Consensus        10 ~~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~   88 (307)
T 2nru_A           10 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ   88 (307)
T ss_dssp             -CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC
T ss_pred             CCCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC
Confidence            35678999999999999974        599999999999987 5788999988532     122467899999999999


Q ss_pred             CCCcceEeeeEeC-CeeEEEEeeCCCCCHHHhhcCC-CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCcee
Q 021659           92 HRHLLALQGFSTG-RKRLLVFDNIENGSLKEHLNDP-LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIM  169 (309)
Q Consensus        92 h~niv~~~~~~~~-~~~~lv~e~~~~~sL~~~i~~~-~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nil  169 (309)
                      ||||+++++++.+ ...++||||+++++|.+++... ....+++..+..++.+++.||.||   |+.+++||||+|+||+
T Consensus        89 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~i~H~dlkp~Nil  165 (307)
T 2nru_A           89 HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL---HENHHIHRDIKSANIL  165 (307)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEE
T ss_pred             CCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHH---hcCCeecCCCCHHHEE
Confidence            9999999998865 6788999999999999998642 245799999999999999999999   7789999999999999


Q ss_pred             eCCCCceeEeccccccccc---------ccCCCCCCCCCCCCCC-CCCCCcEeehhhHHHHHHhCCCCCCCCccH---HH
Q 021659          170 LDENFTAKLSDVGFFNSVR---------NYATMPHSSCPEDCST-QDCSNIIFQLGVLILELVTGQSPEEGDVDL---IQ  236 (309)
Q Consensus       170 l~~~~~~kl~dfg~~~~~~---------~~~~~~~~~~PE~~~~-~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~---~~  236 (309)
                      ++.++.+||+|||++....         ...+++.|+|||...+ .+.++||||||+++|+|++|..||......   ..
T Consensus       166 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~  245 (307)
T 2nru_A          166 LDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLD  245 (307)
T ss_dssp             ECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTH
T ss_pred             EcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHH
Confidence            9999999999999986443         2357889999997544 478899999999999999999999754321   11


Q ss_pred             HHHHh-cccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          237 WIQES-SISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       237 ~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                      ..... .........+++.+ ..........+.+++.+||+.||++|||+.++++.|+++..
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~  306 (307)
T 2nru_A          246 IKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA  306 (307)
T ss_dssp             HHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred             HHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence            11111 11222333444433 23456667888899999999999999999999999997653

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=3.2e-42  Score=298.76  Aligned_cols=241  Identities=18%  Similarity=0.264  Sum_probs=195.9

Q ss_pred             ccccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHHH
Q 021659           43 HRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLKE  121 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~~  121 (309)
                      .+.||+|+||.||++...+++.||+|++.......+.+.+|++++++++||||+++++++.+ ...++||||+++++|.+
T Consensus        15 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   94 (269)
T 4hcu_A           15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD   94 (269)
T ss_dssp             EEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHH
T ss_pred             eheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHH
Confidence            36899999999999999888899999998777777889999999999999999999998865 66789999999999999


Q ss_pred             hhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc--------ccCCC
Q 021659          122 HLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR--------NYATM  193 (309)
Q Consensus       122 ~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~--------~~~~~  193 (309)
                      ++... ...+++..++.++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....        ...++
T Consensus        95 ~l~~~-~~~~~~~~~~~i~~~i~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  170 (269)
T 4hcu_A           95 YLRTQ-RGLFAAETLLGMCLDVCEGMAYL---EEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP  170 (269)
T ss_dssp             HHHTT-TTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCC
T ss_pred             HHHhc-CcccCHHHHHHHHHHHHHHHHHH---HhCCeecCCcchheEEEcCCCCEEeccccccccccccccccccCcccc
Confidence            99653 45689999999999999999999   77899999999999999999999999999987442        22345


Q ss_pred             CCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          194 PHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       194 ~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      ..|+|||..  ...++++||||||+++++|++ |+.||....... ........      ..+..+.. .   ...+.++
T Consensus       171 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~-~~~~~~~~------~~~~~~~~-~---~~~~~~l  239 (269)
T 4hcu_A          171 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE-VVEDISTG------FRLYKPRL-A---STHVYQI  239 (269)
T ss_dssp             GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-HHHHHHTT------CCCCCCTT-S---CHHHHHH
T ss_pred             cccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH-HHHHHhcC------ccCCCCCc-C---CHHHHHH
Confidence            579999964  335788999999999999999 999997654322 12111111      01111111 1   2345666


Q ss_pred             HHHccCCCCCCCCChHHHHHHHhhhhcc
Q 021659          271 ARLCIKTKDKPTISIPQISRYLQNEVDI  298 (309)
Q Consensus       271 ~~~cl~~dp~~Rps~~evl~~L~~~~~~  298 (309)
                      +.+||+.||++|||+.++++.|+++.+.
T Consensus       240 i~~~l~~~p~~Rps~~~ll~~l~~l~~~  267 (269)
T 4hcu_A          240 MNHCWRERPEDRPAFSRLLRQLAEIAES  267 (269)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence            7799999999999999999999987653

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=2.8e-43  Score=327.59  Aligned_cols=249  Identities=16%  Similarity=0.268  Sum_probs=200.4

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCCCCHHHhh
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKEHL  123 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~~sL~~~i  123 (309)
                      +.||+|+||.||+|.+.++..||+|.+.......+.+.+|++++++++||||+++++++.+...++||||+++|+|.+++
T Consensus       190 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~iv~e~~~~gsL~~~l  269 (452)
T 1fmk_A          190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL  269 (452)
T ss_dssp             EEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTTCBHHHHH
T ss_pred             eeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcCCceEEEehhhcCCCHHHHH
Confidence            58999999999999998888899999977666778899999999999999999999999888889999999999999999


Q ss_pred             cCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc--------cCCCCC
Q 021659          124 NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN--------YATMPH  195 (309)
Q Consensus       124 ~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~--------~~~~~~  195 (309)
                      .......+++..+..++.|++.||.||   |+++++||||||+||+++.++.+||+|||++.....        ..++..
T Consensus       270 ~~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~  346 (452)
T 1fmk_A          270 KGETGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK  346 (452)
T ss_dssp             SHHHHTTCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGG
T ss_pred             HhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCccccc
Confidence            753345699999999999999999999   778999999999999999999999999999875432        134457


Q ss_pred             CCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHH
Q 021659          196 SSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVAR  272 (309)
Q Consensus       196 ~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~  272 (309)
                      |+|||..  ...+.++||||||+++|+|++ |+.||.+..... .........      ....+...    ...+.+++.
T Consensus       347 y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~-~~~~i~~~~------~~~~~~~~----~~~l~~li~  415 (452)
T 1fmk_A          347 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-VLDQVERGY------RMPCPPEC----PESLHDLMC  415 (452)
T ss_dssp             GSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-HHHHHHTTC------CCCCCTTS----CHHHHHHHH
T ss_pred             ccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHcCC------CCCCCCCC----CHHHHHHHH
Confidence            9999964  345788999999999999999 999998654321 111111110      01111111    245667777


Q ss_pred             HccCCCCCCCCChHHHHHHHhhhhcccccccccc
Q 021659          273 LCIKTKDKPTISIPQISRYLQNEVDIQCYKYSRV  306 (309)
Q Consensus       273 ~cl~~dp~~Rps~~evl~~L~~~~~~~~~~~~~~  306 (309)
                      +||+.||++|||+.++++.|+.......+.+.+.
T Consensus       416 ~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~~~~~~  449 (452)
T 1fmk_A          416 QCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG  449 (452)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHHTTTSCSCCCCCCS
T ss_pred             HHccCChhhCcCHHHHHHHHHHHhccCCcccccc
Confidence            9999999999999999999999888777665543

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=8.7e-43  Score=310.41  Aligned_cols=243  Identities=19%  Similarity=0.257  Sum_probs=191.1

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-----CeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-----RKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-----~~~~lv~e~~~~~s  118 (309)
                      +.||+|+||.||+|+.. ++.||+|++............|+.++++++||||+++++++..     ...++||||+++|+
T Consensus        30 ~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~  108 (322)
T 3soc_A           30 EVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGS  108 (322)
T ss_dssp             EEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCB
T ss_pred             heecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCC
Confidence            58999999999999875 7899999997665555667779999999999999999997754     23589999999999


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCC----------CeeecccCCCceeeCCCCceeEeccccccccc
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNL----------PMYYVSISSSSIMLDENFTAKLSDVGFFNSVR  188 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~----------~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~  188 (309)
                      |.+++..   ..+++..++.++.|++.||.||   |+.          +++||||||+||+++.++.+||+|||++....
T Consensus       109 L~~~l~~---~~~~~~~~~~i~~qi~~al~~L---H~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~  182 (322)
T 3soc_A          109 LSDFLKA---NVVSWNELCHIAETMARGLAYL---HEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFE  182 (322)
T ss_dssp             HHHHHHH---CCBCHHHHHHHHHHHHHHHHHH---TCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEEC
T ss_pred             HHHHHHh---cCCCHHHHHHHHHHHHHHHHHH---HhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccc
Confidence            9999975   5599999999999999999999   666          99999999999999999999999999986432


Q ss_pred             ---------ccCCCCCCCCCCCCCC-------CCCCCcEeehhhHHHHHHhCCCCCCCCcc---------------HHHH
Q 021659          189 ---------NYATMPHSSCPEDCST-------QDCSNIIFQLGVLILELVTGQSPEEGDVD---------------LIQW  237 (309)
Q Consensus       189 ---------~~~~~~~~~~PE~~~~-------~~~~~Dv~slG~~l~~l~tg~~p~~~~~~---------------~~~~  237 (309)
                               ...+|+.|+|||...+       .+.++||||||+++|+|++|+.||.+...               ....
T Consensus       183 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~  262 (322)
T 3soc_A          183 AGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDM  262 (322)
T ss_dssp             TTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHH
T ss_pred             cccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhh
Confidence                     2357889999997543       24578999999999999999999975321               1111


Q ss_pred             HHHhcccccccccccCcCCCCC-CHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcc
Q 021659          238 IQESSISSSIHRMIDPDLGGSY-DSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDI  298 (309)
Q Consensus       238 ~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~  298 (309)
                      .....     .....+.+...+ .......+.+++.+||+.||++|||+.|+++.|+++...
T Consensus       263 ~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~  319 (322)
T 3soc_A          263 QEVVV-----HKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL  319 (322)
T ss_dssp             HHHHT-----TSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hhhhh-----cccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            11000     011112111111 123456678888899999999999999999999976543

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=1.5e-42  Score=322.88  Aligned_cols=246  Identities=15%  Similarity=0.261  Sum_probs=199.8

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCCCCHHHhh
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKEHL  123 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~~sL~~~i  123 (309)
                      +.||+|+||.||+|.+.++..||+|.+.......+.+.+|+.++++++||||+++++++.+...++||||+++|+|.+++
T Consensus       194 ~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~lv~e~~~~g~L~~~l  273 (454)
T 1qcf_A          194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFL  273 (454)
T ss_dssp             EEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEECCCTTCBHHHHH
T ss_pred             EEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEeCCccEEEEeecCCCcHHHHH
Confidence            68999999999999998888999999987667788999999999999999999999998888889999999999999999


Q ss_pred             cCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc--------cCCCCC
Q 021659          124 NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN--------YATMPH  195 (309)
Q Consensus       124 ~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~--------~~~~~~  195 (309)
                      .......+++..+..++.|++.||.||   |+++++||||||+||+++.++.+||+|||++.....        ..++..
T Consensus       274 ~~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~  350 (454)
T 1qcf_A          274 KSDEGSKQPLPKLIDFSAQIAEGMAFI---EQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK  350 (454)
T ss_dssp             HSHHHHTCCHHHHHHHHHHHHHHHHHH---HHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSSSCGG
T ss_pred             HhccCCCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCccccc
Confidence            763334688999999999999999999   777999999999999999999999999999875432        234567


Q ss_pred             CCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHH
Q 021659          196 SSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVAR  272 (309)
Q Consensus       196 ~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~  272 (309)
                      |+|||..  ...+.++||||||+++|||++ |+.||.+..... ..........      ...+...    ...+.+++.
T Consensus       351 y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~-~~~~i~~~~~------~~~~~~~----~~~l~~li~  419 (454)
T 1qcf_A          351 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE-VIRALERGYR------MPRPENC----PEELYNIMM  419 (454)
T ss_dssp             GSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-HHHHHHHTCC------CCCCTTS----CHHHHHHHH
T ss_pred             ccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHcCCC------CCCCCCC----CHHHHHHHH
Confidence            9999964  345788999999999999999 999998654321 1111111100      0111111    245667777


Q ss_pred             HccCCCCCCCCChHHHHHHHhhhhccccccc
Q 021659          273 LCIKTKDKPTISIPQISRYLQNEVDIQCYKY  303 (309)
Q Consensus       273 ~cl~~dp~~Rps~~evl~~L~~~~~~~~~~~  303 (309)
                      +||+.||++|||+.+|++.|++........|
T Consensus       420 ~cl~~dp~~RPt~~~i~~~L~~~~~~~~~~~  450 (454)
T 1qcf_A          420 RCWKNRPEERPTFEYIQSVLDDFYTATESQY  450 (454)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHHTSSSSSCCSS
T ss_pred             HHccCChhHCcCHHHHHHHHHHHHhcccccc
Confidence            9999999999999999999998776544433

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=3e-42  Score=298.59  Aligned_cols=240  Identities=17%  Similarity=0.257  Sum_probs=194.9

Q ss_pred             ccccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHHH
Q 021659           43 HRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLKE  121 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~~  121 (309)
                      .+.||+|+||.||++...++..||+|++.......+.+.+|++++++++||||+++++++.+ ...++||||+++++|.+
T Consensus        13 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   92 (268)
T 3sxs_A           13 LKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLN   92 (268)
T ss_dssp             EEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHH
T ss_pred             eeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHHH
Confidence            36899999999999999888899999998777777889999999999999999999998865 56789999999999999


Q ss_pred             hhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc--------cCCC
Q 021659          122 HLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN--------YATM  193 (309)
Q Consensus       122 ~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~--------~~~~  193 (309)
                      ++... ...+++..++.++.+++.||.||   |+.+++||||||+||+++.++.++|+|||++.....        ..++
T Consensus        93 ~l~~~-~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~  168 (268)
T 3sxs_A           93 YLRSH-GKGLEPSQLLEMCYDVCEGMAFL---ESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFP  168 (268)
T ss_dssp             HHHHH-GGGCCHHHHHHHHHHHHHHHHHH---HHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCCCC
T ss_pred             HHHHc-CCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCCcC
Confidence            99652 34699999999999999999999   778999999999999999999999999999864432        2334


Q ss_pred             CCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          194 PHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       194 ~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      ..|+|||...  ..+.++||||||+++++|++ |+.||................    ....+    ...   ...+.++
T Consensus       169 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~----~~~~~----~~~---~~~l~~l  237 (268)
T 3sxs_A          169 VKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGH----RLYRP----HLA---SDTIYQI  237 (268)
T ss_dssp             GGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC----CCCCC----TTS---CHHHHHH
T ss_pred             cccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCC----CCCCC----CcC---hHHHHHH
Confidence            5699999754  34789999999999999999 999997654332222111110    00111    111   2345667


Q ss_pred             HHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          271 ARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       271 ~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                      +.+||+.||++|||+.++++.|+.+.+
T Consensus       238 i~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (268)
T 3sxs_A          238 MYSCWHELPEKRPTFQQLLSSIEPLRE  264 (268)
T ss_dssp             HHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred             HHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence            779999999999999999999997654

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=2.2e-42  Score=301.24  Aligned_cols=247  Identities=19%  Similarity=0.305  Sum_probs=198.0

Q ss_pred             ccccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCCCCHHHh
Q 021659           43 HRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKEH  122 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~~sL~~~  122 (309)
                      .+.||+|+||.||+|...++..||+|.+.......+.+.+|++++++++||||+++++++.+...++||||+++++|.++
T Consensus        18 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~   97 (279)
T 1qpc_A           18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDF   97 (279)
T ss_dssp             EEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTTCBHHHH
T ss_pred             eeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcCCCcEEEEecCCCCCHHHH
Confidence            36899999999999998888899999997766677889999999999999999999999888888999999999999999


Q ss_pred             hcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc--------cCCCC
Q 021659          123 LNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN--------YATMP  194 (309)
Q Consensus       123 i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~--------~~~~~  194 (309)
                      +.......+++..+..++.|++.||.||   |+.+++||||+|+||+++.++.+||+|||++.....        ..++.
T Consensus        98 l~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~  174 (279)
T 1qpc_A           98 LKTPSGIKLTINKLLDMAAQIAEGMAFI---EERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI  174 (279)
T ss_dssp             TTSHHHHTCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCT
T ss_pred             HhcCCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCCCcc
Confidence            9753234799999999999999999999   778999999999999999999999999999875432        23456


Q ss_pred             CCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHH
Q 021659          195 HSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVA  271 (309)
Q Consensus       195 ~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~  271 (309)
                      .|.|||...  ..+.++||||||+++++|++ |..||.+..... .........      .+......    ...+.+++
T Consensus       175 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-~~~~~~~~~------~~~~~~~~----~~~l~~li  243 (279)
T 1qpc_A          175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE-VIQNLERGY------RMVRPDNC----PEELYQLM  243 (279)
T ss_dssp             TTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-HHHHHHTTC------CCCCCTTC----CHHHHHHH
T ss_pred             CccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH-HHHHHhccc------CCCCcccc----cHHHHHHH
Confidence            799999753  34778999999999999999 899997654322 111111110      01111111    24566677


Q ss_pred             HHccCCCCCCCCChHHHHHHHhhhhccccccc
Q 021659          272 RLCIKTKDKPTISIPQISRYLQNEVDIQCYKY  303 (309)
Q Consensus       272 ~~cl~~dp~~Rps~~evl~~L~~~~~~~~~~~  303 (309)
                      .+||..||++|||+.++++.|++........+
T Consensus       244 ~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~  275 (279)
T 1qpc_A          244 RLCWKERPEDRPTFDYLRSVLEDFFTATEGQY  275 (279)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHHHHHHC----
T ss_pred             HHHhccChhhCCCHHHHHHHHHHHHHhccCCC
Confidence            79999999999999999999998876654443

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=2.1e-41  Score=301.44  Aligned_cols=249  Identities=19%  Similarity=0.243  Sum_probs=197.2

Q ss_pred             cccCHHHHHHhhcc----------cc--cccccCCCceEEEEEEc-CCcEEEEEEecccc-ccHHHHHHHHHHHccCCCC
Q 021659           28 RRFSYKDIKMATDG----------FH--RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN-LEKDAFYREIQLLGRLHHR   93 (309)
Q Consensus        28 ~~~~~~~i~~~~~~----------~~--~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~-~~~~~~~~ei~~l~~l~h~   93 (309)
                      +.++++++..+++.          +.  +.||+|+||.||+|+.. +|+.||+|++.... ...+.+.+|+.++++++||
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~  102 (321)
T 2c30_A           23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF  102 (321)
T ss_dssp             --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred             CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence            56889999888764          22  47999999999999975 68999999985433 3456789999999999999


Q ss_pred             CcceEeeeEe-CCeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC
Q 021659           94 HLLALQGFST-GRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE  172 (309)
Q Consensus        94 niv~~~~~~~-~~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~  172 (309)
                      ||+++++++. ....++||||+++++|.+++..   ..+++..+..++.+++.||.||   |+.+++||||||+||+++.
T Consensus       103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~  176 (321)
T 2c30_A          103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYL---HAQGVIHRDIKSDSILLTL  176 (321)
T ss_dssp             TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECT
T ss_pred             CcceEEEEEEECCEEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEECC
Confidence            9999999765 4788899999999999999874   5699999999999999999999   6789999999999999999


Q ss_pred             CCceeEeccccccccc-------ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcc
Q 021659          173 NFTAKLSDVGFFNSVR-------NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSI  243 (309)
Q Consensus       173 ~~~~kl~dfg~~~~~~-------~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~  243 (309)
                      ++.+||+|||++....       ...+|+.|+|||....  .+.++||||||+++|+|++|+.||.......... ....
T Consensus       177 ~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~-~~~~  255 (321)
T 2c30_A          177 DGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK-RLRD  255 (321)
T ss_dssp             TCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HHHH
T ss_pred             CCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHhc
Confidence            9999999999986443       2367889999996543  4788999999999999999999997654332211 1111


Q ss_pred             cccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          244 SSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       244 ~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                       .     ..+.+..  .......+.+++.+||+.||++|||+.|+++.
T Consensus       256 -~-----~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  295 (321)
T 2c30_A          256 -S-----PPPKLKN--SHKVSPVLRDFLERMLVRDPQERATAQELLDH  295 (321)
T ss_dssp             -S-----SCCCCTT--GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             -C-----CCCCcCc--cccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence             0     0111111  01112345666779999999999999999864

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=3.8e-42  Score=306.71  Aligned_cols=242  Identities=19%  Similarity=0.290  Sum_probs=191.0

Q ss_pred             cccccCCCceEEEEEEc----CCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ----DGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~----~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||+|.+.    .+..||+|.+....  ...+.+.+|++++++++||||+++++++.+ ...++||||+++
T Consensus        55 ~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  134 (325)
T 3kul_A           55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMEN  134 (325)
T ss_dssp             EEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCTT
T ss_pred             eEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCCC
Confidence            57999999999999973    34569999986432  234578999999999999999999998865 677899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------  189 (309)
                      ++|.+++... ...+++..++.++.+++.||.||   |+.+++||||||+||+++.++.+||+|||++.....       
T Consensus       135 ~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~  210 (325)
T 3kul_A          135 GSLDTFLRTH-DGQFTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYT  210 (325)
T ss_dssp             CBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----CCEE
T ss_pred             CcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHH---HHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCccceee
Confidence            9999999653 35799999999999999999999   778999999999999999999999999999875432       


Q ss_pred             ---cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHH
Q 021659          190 ---YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKE  263 (309)
Q Consensus       190 ---~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  263 (309)
                         ..++..|+|||...  ..+.++||||||+++|+|++ |..||........ ........      ........    
T Consensus       211 ~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~-~~~~~~~~------~~~~~~~~----  279 (325)
T 3kul_A          211 TTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV-ISSVEEGY------RLPAPMGC----  279 (325)
T ss_dssp             CC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHH-HHHHHTTC------CCCCCTTC----
T ss_pred             ccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHH-HHHHHcCC------CCCCCCCc----
Confidence               12345699999753  34778999999999999999 9999976543221 11111110      01111111    


Q ss_pred             HHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcccc
Q 021659          264 LKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQC  300 (309)
Q Consensus       264 ~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~  300 (309)
                      ...+.+++.+||..||++|||+.++++.|+.++....
T Consensus       280 ~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~  316 (325)
T 3kul_A          280 PHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE  316 (325)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence            2456677779999999999999999999998876544

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=7.1e-42  Score=298.58  Aligned_cols=241  Identities=19%  Similarity=0.242  Sum_probs=193.6

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHHHh
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLKEH  122 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~~~  122 (309)
                      +.||+|+||.||++.+.++..||+|++.......+.+.+|++++++++||||+++++++.+ ...++||||+++++|.++
T Consensus        30 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~  109 (283)
T 3gen_A           30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY  109 (283)
T ss_dssp             EECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHHHH
T ss_pred             hhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHHHH
Confidence            6899999999999999888899999998777777889999999999999999999998865 667899999999999999


Q ss_pred             hcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc--------ccCCCC
Q 021659          123 LNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR--------NYATMP  194 (309)
Q Consensus       123 i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~--------~~~~~~  194 (309)
                      +... ...+++..++.++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....        ...+++
T Consensus       110 l~~~-~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~  185 (283)
T 3gen_A          110 LREM-RHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV  185 (283)
T ss_dssp             HHCG-GGCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTTSCG
T ss_pred             HHHh-ccCCCHHHHHHHHHHHHHHHHHH---HHCCccCCCCccceEEEcCCCCEEEccccccccccccccccccCCccCc
Confidence            9753 35699999999999999999999   77899999999999999999999999999987542        223456


Q ss_pred             CCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHH
Q 021659          195 HSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVA  271 (309)
Q Consensus       195 ~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~  271 (309)
                      .|+|||..  ...+.++||||||+++|+|++ |+.||........... ....      ........ .   ...+.+++
T Consensus       186 ~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~-~~~~------~~~~~~~~-~---~~~l~~li  254 (283)
T 3gen_A          186 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQG------LRLYRPHL-A---SEKVYTIM  254 (283)
T ss_dssp             GGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH-HHTT------CCCCCCTT-C---CHHHHHHH
T ss_pred             ccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHH-Hhcc------cCCCCCCc-C---CHHHHHHH
Confidence            79999964  335788999999999999998 9999986543222111 1110      00111111 1   23566677


Q ss_pred             HHccCCCCCCCCChHHHHHHHhhhhccc
Q 021659          272 RLCIKTKDKPTISIPQISRYLQNEVDIQ  299 (309)
Q Consensus       272 ~~cl~~dp~~Rps~~evl~~L~~~~~~~  299 (309)
                      .+||+.||++|||+.++++.|+++.+-+
T Consensus       255 ~~~l~~~p~~Rps~~~ll~~L~~~~~~e  282 (283)
T 3gen_A          255 YSCWHEKADERPTFKILLSNILDVMDEE  282 (283)
T ss_dssp             HHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             HHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence            7999999999999999999999887644

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=1.3e-42  Score=307.29  Aligned_cols=242  Identities=16%  Similarity=0.303  Sum_probs=190.1

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccc-cccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQAL-NLEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~-~~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL~  120 (309)
                      +.||+|+||.||++... +++.||+|.+... ....+.+.+|++++++++||||+++++++. +...++||||+++++|.
T Consensus        16 ~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~   95 (310)
T 3s95_A           16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLR   95 (310)
T ss_dssp             EEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHH
T ss_pred             ceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcHH
Confidence            68999999999999974 5889999988443 334567899999999999999999999775 47788999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------------
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------------  188 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------------  188 (309)
                      +++... ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....            
T Consensus        96 ~~l~~~-~~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~  171 (310)
T 3s95_A           96 GIIKSM-DSQYPWSQRVSFAKDIASGMAYL---HSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSL  171 (310)
T ss_dssp             HHHHHC-CTTSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC------------
T ss_pred             HHHHhc-cCCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCCcCeEEECCCCCEEEeecccceecccccccccccccc
Confidence            999753 46799999999999999999999   77899999999999999999999999999986442            


Q ss_pred             ---------ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCC
Q 021659          189 ---------NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGG  257 (309)
Q Consensus       189 ---------~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  257 (309)
                               ...+|+.|+|||...+  .+.++||||||+++|+|++|..|+........     ..........+.....
T Consensus       172 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~  246 (310)
T 3s95_A          172 KKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTM-----DFGLNVRGFLDRYCPP  246 (310)
T ss_dssp             --------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCT-----TSSBCHHHHHHHTCCT
T ss_pred             cccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHH-----HHhhhhhccccccCCC
Confidence                     2357888999996543  47889999999999999999999864321000     0000000001111111


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcc
Q 021659          258 SYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDI  298 (309)
Q Consensus       258 ~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~  298 (309)
                      ..    ...+.+++.+||+.||++|||+.++++.|+.+..-
T Consensus       247 ~~----~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~  283 (310)
T 3s95_A          247 NC----PPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH  283 (310)
T ss_dssp             TC----CTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            11    13455677799999999999999999999876543

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=2.4e-42  Score=308.43  Aligned_cols=231  Identities=16%  Similarity=0.227  Sum_probs=186.6

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccccc---HHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLE---KDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~s  118 (309)
                      +.||+|+||.||+|.. .+++.||+|++......   .+.+.+|++++++++||||+++++++.. ...|+||||+++++
T Consensus        21 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~  100 (328)
T 3fe3_A           21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGE  100 (328)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCB
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCCc
Confidence            6899999999999997 57899999999654332   3568899999999999999999998765 67889999999999


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------ccCC
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------NYAT  192 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------~~~~  192 (309)
                      |.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....      ...+
T Consensus       101 L~~~l~~--~~~l~~~~~~~~~~qi~~al~~l---H~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~g  175 (328)
T 3fe3_A          101 VFDYLVA--HGRMKEKEARSKFRQIVSAVQYC---HQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCG  175 (328)
T ss_dssp             HHHHHHH--HCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGTTSS
T ss_pred             HHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCccccccC
Confidence            9999976  46799999999999999999999   77899999999999999999999999999986432      3468


Q ss_pred             CCCCCCCCCCCCC---CCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHH
Q 021659          193 MPHSSCPEDCSTQ---DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLA  269 (309)
Q Consensus       193 ~~~~~~PE~~~~~---~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~  269 (309)
                      |+.|+|||...+.   ++++|||||||++|+|++|+.||.+.... ........ +.      ...+.. .   ...+.+
T Consensus       176 t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~i~~-~~------~~~p~~-~---s~~~~~  243 (328)
T 3fe3_A          176 APPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK-ELRERVLR-GK------YRIPFY-M---STDCEN  243 (328)
T ss_dssp             SGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHH-CC------CCCCTT-S---CHHHHH
T ss_pred             CcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH-HHHHHHHh-CC------CCCCCC-C---CHHHHH
Confidence            8999999975432   46799999999999999999999865422 21111111 10      111111 1   234556


Q ss_pred             HHHHccCCCCCCCCChHHHHHH
Q 021659          270 VARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       270 l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      ++.+||..||++|||+.|+++.
T Consensus       244 li~~~L~~dP~~R~t~~eil~h  265 (328)
T 3fe3_A          244 LLKRFLVLNPIKRGTLEQIMKD  265 (328)
T ss_dssp             HHHHHCCSSTTTSCCHHHHTTC
T ss_pred             HHHHHCCCChhHCcCHHHHhcC
Confidence            6669999999999999999854

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=8.2e-42  Score=300.81  Aligned_cols=232  Identities=18%  Similarity=0.259  Sum_probs=187.3

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccc-cccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQAL-NLEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~-~~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL~  120 (309)
                      +.||+|+||.||+|.. .+++.||+|.+... ....+.+.+|+.++++++||||+++++++. ....++||||+++++|.
T Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~  105 (297)
T 3fxz_A           26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT  105 (297)
T ss_dssp             EEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHH
T ss_pred             eeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCHH
Confidence            5899999999999996 56889999998543 334567899999999999999999999765 47788999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccCCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYATM  193 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~~~  193 (309)
                      +++..   ..+++..+..++.+++.||.||   |+.+++||||||+||+++.++.+||+|||++....       ...++
T Consensus       106 ~~~~~---~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt  179 (297)
T 3fxz_A          106 DVVTE---TCMDEGQIAAVCRECLQALEFL---HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGT  179 (297)
T ss_dssp             HHHHH---SCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSC
T ss_pred             HHHhh---cCCCHHHHHHHHHHHHHHHHHH---HhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCCccCC
Confidence            99975   4699999999999999999999   77799999999999999999999999999976432       33678


Q ss_pred             CCCCCCCCC--CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHH
Q 021659          194 PHSSCPEDC--STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVA  271 (309)
Q Consensus       194 ~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~  271 (309)
                      +.|+|||..  ...++++||||||+++|+|++|+.||................  ......+       ......+.+++
T Consensus       180 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~-------~~~~~~~~~li  250 (297)
T 3fxz_A          180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG--TPELQNP-------EKLSAIFRDFL  250 (297)
T ss_dssp             GGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHC--SCCCSCG-------GGSCHHHHHHH
T ss_pred             cCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CCCCCCc-------cccCHHHHHHH
Confidence            899999964  334789999999999999999999998765443322211111  0011001       11134456677


Q ss_pred             HHccCCCCCCCCChHHHHH
Q 021659          272 RLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       272 ~~cl~~dp~~Rps~~evl~  290 (309)
                      .+||+.||++|||+.|+++
T Consensus       251 ~~~l~~dp~~Rps~~ell~  269 (297)
T 3fxz_A          251 NRCLEMDVEKRGSAKELLQ  269 (297)
T ss_dssp             HHHSCSSTTTSCCHHHHTT
T ss_pred             HHHccCChhHCcCHHHHhh
Confidence            7999999999999999986

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=5.9e-42  Score=301.23  Aligned_cols=245  Identities=17%  Similarity=0.230  Sum_probs=193.1

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc----cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL----EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~----~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||++.. .++..||+|.+.....    ..+.+.+|+.++++++||||+++++++.+ ...++||||++++
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~   96 (294)
T 4eqm_A           17 DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGP   96 (294)
T ss_dssp             EEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred             EEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCCC
Confidence            6899999999999996 4588999999843322    23578899999999999999999998865 6778999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc--------c
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR--------N  189 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~--------~  189 (309)
                      +|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....        .
T Consensus        97 ~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  171 (294)
T 4eqm_A           97 TLSEYIES--HGPLSVDTAINFTNQILDGIKHA---HDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNH  171 (294)
T ss_dssp             BHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC----------
T ss_pred             CHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccccccCc
Confidence            99999976  46799999999999999999999   77899999999999999999999999999986543        2


Q ss_pred             cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          190 YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ..+|+.|+|||...+  .+.++||||||+++|+|++|+.||.+..............  .+.. .+.....    ....+
T Consensus       172 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~--~~~~-~~~~~~~----~~~~l  244 (294)
T 4eqm_A          172 VLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDS--VPNV-TTDVRKD----IPQSL  244 (294)
T ss_dssp             ---CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSC--CCCH-HHHSCTT----SCHHH
T ss_pred             cccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhcc--CCCc-chhcccC----CCHHH
Confidence            357899999996433  4788999999999999999999998765443333222111  1110 0011111    12456


Q ss_pred             HHHHHHccCCCCCCCC-ChHHHHHHHhhhhcccc
Q 021659          268 LAVARLCIKTKDKPTI-SIPQISRYLQNEVDIQC  300 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rp-s~~evl~~L~~~~~~~~  300 (309)
                      .+++.+||+.||++|| ++.++.+.|+..+.-..
T Consensus       245 ~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~  278 (294)
T 4eqm_A          245 SNVILRATEKDKANRYKTIQEMKDDLSSVLHENR  278 (294)
T ss_dssp             HHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSS
T ss_pred             HHHHHHHhcCCHhHccccHHHHHHHHHHHHhhcc
Confidence            6777799999999999 88999999997765443

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.5e-41  Score=302.50  Aligned_cols=236  Identities=14%  Similarity=0.173  Sum_probs=188.4

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      .+.||+|+||.||++... +++.+|+|.+.........+.+|+.+++.++||||+++++++.+ ...++||||+++++|.
T Consensus        10 ~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~   89 (321)
T 1tki_A           10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIF   89 (321)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHH
T ss_pred             eeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHH
Confidence            368999999999999974 57899999987665566778999999999999999999997754 7888999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC--CCceeEecccccccccc------cCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE--NFTAKLSDVGFFNSVRN------YAT  192 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~--~~~~kl~dfg~~~~~~~------~~~  192 (309)
                      +++... ...+++..++.++.|++.||.||   |+.+++||||||+||+++.  ++.+||+|||++.....      ..+
T Consensus        90 ~~l~~~-~~~~~~~~~~~i~~qi~~al~~l---H~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~g  165 (321)
T 1tki_A           90 ERINTS-AFELNEREIVSYVHQVCEALQFL---HSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFT  165 (321)
T ss_dssp             HHHTSS-SCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEES
T ss_pred             HHHHhc-CCCCCHHHHHHHHHHHHHHHHHH---HHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccccccC
Confidence            999752 35799999999999999999999   7789999999999999987  78999999999875432      357


Q ss_pred             CCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          193 MPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       193 ~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      ++.|+|||....  .++++||||||+++|+|++|..||.+...................-..+    .    ....+.++
T Consensus       166 t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~----~----~s~~~~~l  237 (321)
T 1tki_A          166 APEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFK----E----ISIEAMDF  237 (321)
T ss_dssp             CGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHT----T----SCHHHHHH
T ss_pred             ChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhc----c----CCHHHHHH
Confidence            889999997544  3788999999999999999999998654322111111111000000000    1    12456677


Q ss_pred             HHHccCCCCCCCCChHHHHH
Q 021659          271 ARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       271 ~~~cl~~dp~~Rps~~evl~  290 (309)
                      +.+||..||++|||+.|+++
T Consensus       238 i~~~L~~dp~~Rpt~~e~l~  257 (321)
T 1tki_A          238 VDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             HHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHcCCChhHCcCHHHHhc
Confidence            77999999999999999986

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=8.6e-43  Score=330.66  Aligned_cols=248  Identities=16%  Similarity=0.279  Sum_probs=201.7

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCCCCHHHhh
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKEHL  123 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~~sL~~~i  123 (309)
                      +.||+|+||.||+|.+.++..||+|++.......+.|.+|++++++++||||+++++++.+...++||||+++|+|.+++
T Consensus       273 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~lv~e~~~~gsL~~~l  352 (535)
T 2h8h_A          273 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL  352 (535)
T ss_dssp             EEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTTEEHHHHH
T ss_pred             eecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEeeccceEeeehhcCCcHHHHH
Confidence            58999999999999998888899999977666778899999999999999999999999888889999999999999999


Q ss_pred             cCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc--------cCCCCC
Q 021659          124 NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN--------YATMPH  195 (309)
Q Consensus       124 ~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~--------~~~~~~  195 (309)
                      .......+++..++.++.|++.||.||   |+++++||||||+|||++.++.+||+|||++.....        ..++..
T Consensus       353 ~~~~~~~l~~~~~~~i~~qi~~~L~~L---H~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~  429 (535)
T 2h8h_A          353 KGETGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK  429 (535)
T ss_dssp             SHHHHTTCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGG
T ss_pred             hhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcCccc
Confidence            753345689999999999999999999   778999999999999999999999999999875431        234567


Q ss_pred             CCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHH
Q 021659          196 SSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVAR  272 (309)
Q Consensus       196 ~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~  272 (309)
                      |+|||..  ...+.++||||||+++|||++ |+.||.+.... +.........      .......+    ...+.+++.
T Consensus       430 y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~-~~~~~i~~~~------~~~~~~~~----~~~l~~li~  498 (535)
T 2h8h_A          430 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-EVLDQVERGY------RMPCPPEC----PESLHDLMC  498 (535)
T ss_dssp             GSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH-HHHHHHHTTC------CCCCCTTC----CHHHHHHHH
T ss_pred             ccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCC------CCCCCCCC----CHHHHHHHH
Confidence            9999964  345788999999999999999 99999765432 1111111110      01111111    245667777


Q ss_pred             HccCCCCCCCCChHHHHHHHhhhhccccccccc
Q 021659          273 LCIKTKDKPTISIPQISRYLQNEVDIQCYKYSR  305 (309)
Q Consensus       273 ~cl~~dp~~Rps~~evl~~L~~~~~~~~~~~~~  305 (309)
                      +||+.||++|||+.+|++.|+.......+.|..
T Consensus       499 ~cl~~dP~~RPt~~~l~~~L~~~~~~~~~~~~~  531 (535)
T 2h8h_A          499 QCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQP  531 (535)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHHTSSCCCSCSSCC
T ss_pred             HHcCCChhHCcCHHHHHHHHHHHhhccCcccCc
Confidence            999999999999999999999988776666543

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=6.2e-41  Score=302.96  Aligned_cols=235  Identities=17%  Similarity=0.241  Sum_probs=187.2

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEeccccc-------cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEee
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL-------EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~-------~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      .+.||+|+||.||++... +++.||+|.+.....       ..+.+.+|+.++++++||||+++++++.+ ...++||||
T Consensus        17 ~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~   96 (361)
T 2yab_A           17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILEL   96 (361)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             eeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEc
Confidence            368999999999999974 588999999954322       24679999999999999999999998765 678899999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCC----ceeEeccccccccc-
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENF----TAKLSDVGFFNSVR-  188 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~----~~kl~dfg~~~~~~-  188 (309)
                      +++|+|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++    .+||+|||++.... 
T Consensus        97 ~~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~L---H~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~  171 (361)
T 2yab_A           97 VSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYL---HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED  171 (361)
T ss_dssp             CCSCBHHHHHTT--CSCCBHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCT
T ss_pred             CCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCC
Confidence            999999999976  56899999999999999999999   778999999999999998776    79999999986543 


Q ss_pred             -----ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCH
Q 021659          189 -----NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDS  261 (309)
Q Consensus       189 -----~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  261 (309)
                           ...+|+.|+|||...  .++.++||||||+++|+|++|..||.+..................    +......  
T Consensus       172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~--  245 (361)
T 2yab_A          172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFD----EEFFSQT--  245 (361)
T ss_dssp             TCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCC----HHHHTTS--
T ss_pred             CCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC----chhccCC--
Confidence                 346888999999654  357889999999999999999999987543322211111111100    0000111  


Q ss_pred             HHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          262 KELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       262 ~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                        ...+.+++.+||..||++|||+.|+++
T Consensus       246 --s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          246 --SELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             --CHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             --CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence              234556677999999999999999984

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=1e-40  Score=291.87  Aligned_cols=239  Identities=20%  Similarity=0.316  Sum_probs=187.8

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEecccccc--H------HHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEee
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQALNLE--K------DAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDN  113 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~--~------~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~  113 (309)
                      .+.||+|+||.||+|.. .+++.||+|++......  .      +.+.+|++++++++||||+++++++.+.. ++||||
T Consensus        24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~lv~e~  102 (287)
T 4f0f_A           24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-RMVMEF  102 (287)
T ss_dssp             EEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-EEEEEC
T ss_pred             hhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-eEEEEe
Confidence            36899999999999997 46899999998433221  1      57899999999999999999999886543 799999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCC--eeecccCCCceeeCCCCc-----eeEeccccccc
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLP--MYYVSISSSSIMLDENFT-----AKLSDVGFFNS  186 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~--i~H~dl~p~nill~~~~~-----~kl~dfg~~~~  186 (309)
                      +++++|.+.+... ...+++..++.++.|++.||.||   |+.+  ++||||||+||+++.++.     +||+|||++..
T Consensus       103 ~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~l---H~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~  178 (287)
T 4f0f_A          103 VPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYM---QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ  178 (287)
T ss_dssp             CTTCBHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHH---HTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBC
T ss_pred             cCCCCHHHHHhcc-cCCccHHHHHHHHHHHHHHHHHH---HhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCcccc
Confidence            9999999888653 46799999999999999999999   6777  999999999999987776     99999999864


Q ss_pred             cc----ccCCCCCCCCCCCCCC----CCCCCcEeehhhHHHHHHhCCCCCCCCccHHH-HHHHhcccccccccccCcCCC
Q 021659          187 VR----NYATMPHSSCPEDCST----QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQ-WIQESSISSSIHRMIDPDLGG  257 (309)
Q Consensus       187 ~~----~~~~~~~~~~PE~~~~----~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~  257 (309)
                      ..    ...+++.|.|||....    .++++||||||+++|+|++|+.||........ .........     ..+....
T Consensus       179 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~-----~~~~~~~  253 (287)
T 4f0f_A          179 SVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG-----LRPTIPE  253 (287)
T ss_dssp             CSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSC-----CCCCCCT
T ss_pred             ccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccC-----CCCCCCc
Confidence            43    3467899999997632    26789999999999999999999975432211 111111111     1111222


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhh
Q 021659          258 SYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNE  295 (309)
Q Consensus       258 ~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~  295 (309)
                      ..    ...+.+++.+||+.||++|||+.++++.|+++
T Consensus       254 ~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          254 DC----PPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             TS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             cc----CHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            22    24566677799999999999999999999853

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=3.9e-42  Score=312.00  Aligned_cols=243  Identities=17%  Similarity=0.244  Sum_probs=190.2

Q ss_pred             cccccCCCceEEEEEEc--------CCcEEEEEEeccccc--cHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEE
Q 021659           44 RIVYTNSHGAAYKARFQ--------DGEVALVKEIQALNL--EKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVF  111 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~--------~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~  111 (309)
                      +.||+|+||.||+|...        ++..||+|.+.....  ..+.+.+|+++++++ +||||+++++++.+ ...|+||
T Consensus        87 ~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~  166 (370)
T 2psq_A           87 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV  166 (370)
T ss_dssp             EEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             eEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEEE
Confidence            57999999999999852        345799999864432  235789999999999 89999999998765 6788999


Q ss_pred             eeCCCCCHHHhhcCCC--------------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCcee
Q 021659          112 DNIENGSLKEHLNDPL--------------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAK  177 (309)
Q Consensus       112 e~~~~~sL~~~i~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~k  177 (309)
                      ||+++|+|.+++....              ...+++..++.++.|++.||.||   |+++++||||||+||+++.++.+|
T Consensus       167 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~~~~k  243 (370)
T 2psq_A          167 EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMK  243 (370)
T ss_dssp             ECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEECTTCCEE
T ss_pred             EcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHH---HhCCeeccccchhhEEECCCCCEE
Confidence            9999999999996532              24589999999999999999999   778999999999999999999999


Q ss_pred             Eecccccccccc---------cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccc
Q 021659          178 LSDVGFFNSVRN---------YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISS  245 (309)
Q Consensus       178 l~dfg~~~~~~~---------~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~  245 (309)
                      |+|||++.....         ..+++.|+|||...  ..+.++||||||+++|||++ |..||.+.... ........ +
T Consensus       244 l~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~-~~~~~~~~-~  321 (370)
T 2psq_A          244 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-ELFKLLKE-G  321 (370)
T ss_dssp             ECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-GHHHHHHT-T
T ss_pred             EccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHhc-C
Confidence            999999874432         23456799999643  35788999999999999999 99999764321 11111110 1


Q ss_pred             cccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcccc
Q 021659          246 SIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQC  300 (309)
Q Consensus       246 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~  300 (309)
                      .     .+..+...    ...+.+++.+||+.||++|||+.|+++.|++++....
T Consensus       322 ~-----~~~~~~~~----~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~  367 (370)
T 2psq_A          322 H-----RMDKPANC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT  367 (370)
T ss_dssp             C-----CCCCCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred             C-----CCCCCCCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence            0     11111111    2456667779999999999999999999998876543

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=5.2e-41  Score=299.49  Aligned_cols=235  Identities=17%  Similarity=0.238  Sum_probs=187.7

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEeccccc-------cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEee
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL-------EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~-------~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      .+.||+|+||.||++... ++..||+|.+.....       ..+.+.+|+.++++++||||+++++++.+ ...++||||
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   95 (326)
T 2y0a_A           16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL   95 (326)
T ss_dssp             EEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEc
Confidence            468999999999999974 588999999854321       35779999999999999999999998765 678899999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCC----ceeEeccccccccc-
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENF----TAKLSDVGFFNSVR-  188 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~----~~kl~dfg~~~~~~-  188 (309)
                      +++++|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++    .+||+|||++.... 
T Consensus        96 ~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~  170 (326)
T 2y0a_A           96 VAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYL---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF  170 (326)
T ss_dssp             CCSCBHHHHHTT--SSCCBHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCT
T ss_pred             CCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHH---HHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCC
Confidence            999999999976  57799999999999999999999   778999999999999998887    79999999986543 


Q ss_pred             -----ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCH
Q 021659          189 -----NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDS  261 (309)
Q Consensus       189 -----~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  261 (309)
                           ...+|+.|+|||...  ..+.++||||||+++|+|++|..||.+......................    ..   
T Consensus       171 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~----~~---  243 (326)
T 2y0a_A          171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF----SN---  243 (326)
T ss_dssp             TSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHH----TT---
T ss_pred             CCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCcccc----cc---
Confidence                 346889999999653  3478899999999999999999999765433222111111111000000    01   


Q ss_pred             HHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          262 KELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       262 ~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                       ....+.+++.+||..||++|||+.|+++
T Consensus       244 -~~~~~~~li~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          244 -TSALAKDFIRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             -SCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             -CCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence             1234566777999999999999999986

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=8e-42  Score=300.57  Aligned_cols=241  Identities=18%  Similarity=0.262  Sum_probs=185.1

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHcc--CCCCCcceEeeeEeC-----CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGR--LHHRHLLALQGFSTG-----RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~--l~h~niv~~~~~~~~-----~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||+|+. +++.||+|++...  ....+..|.+++..  ++||||+++++++..     ...++||||+++
T Consensus        14 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~   90 (301)
T 3q4u_A           14 ECVGKGRYGEVWRGSW-QGENVAVKIFSSR--DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEM   90 (301)
T ss_dssp             EEEEECSSEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTT
T ss_pred             EeeccCCCcEEEEEEE-CCEEEEEEEeccc--cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccC
Confidence            6899999999999998 6889999998643  34455666666655  789999999997532     346799999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhc-----CCCCeeecccCCCceeeCCCCceeEeccccccccc---
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLF-----SNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---  188 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~-----h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---  188 (309)
                      |+|.+++..   ..+++..++.++.|++.||.|||+.     ++.+++||||||+||+++.++.+||+|||++....   
T Consensus        91 g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~  167 (301)
T 3q4u_A           91 GSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST  167 (301)
T ss_dssp             CBHHHHHTT---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTT
T ss_pred             CCHHHHHhh---cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeeccccc
Confidence            999999964   6799999999999999999999521     18899999999999999999999999999985432   


Q ss_pred             --------ccCCCCCCCCCCCCCCC--------CCCCcEeehhhHHHHHHhC----------CCCCCCCc----cHHHHH
Q 021659          189 --------NYATMPHSSCPEDCSTQ--------DCSNIIFQLGVLILELVTG----------QSPEEGDV----DLIQWI  238 (309)
Q Consensus       189 --------~~~~~~~~~~PE~~~~~--------~~~~Dv~slG~~l~~l~tg----------~~p~~~~~----~~~~~~  238 (309)
                              ...+|+.|+|||.....        ++++||||||+++|+|++|          +.||....    ......
T Consensus       168 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~  247 (301)
T 3q4u_A          168 NQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMR  247 (301)
T ss_dssp             TEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHH
T ss_pred             ccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhh
Confidence                    22678899999965432        3579999999999999999          88885421    111111


Q ss_pred             HHhcccccccccccCcCCCC-CCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhh
Q 021659          239 QESSISSSIHRMIDPDLGGS-YDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNE  295 (309)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~-~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~  295 (309)
                      .......     ..+.++.. ........+.+++.+||+.||++|||+.++++.|+++
T Consensus       248 ~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          248 KVVCVDQ-----QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             HHHTTSC-----CCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHhccC-----CCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            1111111     11122111 1233567788888899999999999999999999864

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=4.6e-41  Score=297.32  Aligned_cols=245  Identities=18%  Similarity=0.234  Sum_probs=187.8

Q ss_pred             ccccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCCCCHHHh
Q 021659           43 HRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKEH  122 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~~sL~~~  122 (309)
                      .+.||+|+||.||++++. ++.||+|.+... ...+.+.+|++++++++||||+++++++.+ ..++||||+++++|.++
T Consensus        13 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~lv~e~~~~~~L~~~   89 (307)
T 2eva_A           13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESE-SERKAFIVELRQLSRVNHPNIVKLYGACLN-PVCLVMEYAEGGSLYNV   89 (307)
T ss_dssp             EEEEECCSSSEEEEEEET-TEEEEEEECSST-THHHHHHHHHHHHHHCCCTTBCCEEEBCTT-TTEEEEECCTTCBHHHH
T ss_pred             eeEeecCCCceEEEEEEC-CeeEEEEEecCh-hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-CcEEEEEcCCCCCHHHH
Confidence            368999999999999984 778999998643 345679999999999999999999998764 47899999999999999


Q ss_pred             hcCCCC-CCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCc-eeEeccccccccc----ccCCCCCC
Q 021659          123 LNDPLK-TPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFT-AKLSDVGFFNSVR----NYATMPHS  196 (309)
Q Consensus       123 i~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~-~kl~dfg~~~~~~----~~~~~~~~  196 (309)
                      +..... ..+++..++.++.+++.||.|||..+.++++||||||+||+++.++. +||+|||++....    ...+++.|
T Consensus        90 l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y  169 (307)
T 2eva_A           90 LHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAW  169 (307)
T ss_dssp             HHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------CCTTS
T ss_pred             HhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccccCCCCCce
Confidence            986322 35789999999999999999997655589999999999999988876 7999999986443    34678999


Q ss_pred             CCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHHc
Q 021659          197 SCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLC  274 (309)
Q Consensus       197 ~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~c  274 (309)
                      +|||...+  .+.++||||||+++++|++|+.||..................     .+......    ...+.+++.+|
T Consensus       170 ~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-----~~~~~~~~----~~~l~~li~~~  240 (307)
T 2eva_A          170 MAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGT-----RPPLIKNL----PKPIESLMTRC  240 (307)
T ss_dssp             SCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTC-----CCCCBTTC----CHHHHHHHHHH
T ss_pred             EChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCC-----CCCccccc----CHHHHHHHHHH
Confidence            99997543  478899999999999999999999753221111111111111     11111112    23456677799


Q ss_pred             cCCCCCCCCChHHHHHHHhhhhccc
Q 021659          275 IKTKDKPTISIPQISRYLQNEVDIQ  299 (309)
Q Consensus       275 l~~dp~~Rps~~evl~~L~~~~~~~  299 (309)
                      |+.||++|||+.++++.|+.+.+.-
T Consensus       241 l~~dp~~Rps~~ell~~L~~~~~~~  265 (307)
T 2eva_A          241 WSKDPSQRPSMEEIVKIMTHLMRYF  265 (307)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred             hcCChhhCcCHHHHHHHHHHHHHhc
Confidence            9999999999999999998776543

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=4.6e-42  Score=322.78  Aligned_cols=241  Identities=17%  Similarity=0.263  Sum_probs=196.0

Q ss_pred             ccccccCCCceEEEEEEcC-CcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           43 HRIVYTNSHGAAYKARFQD-GEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~-~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      .+.||+|+||.||+|.+.. +..||+|.+.......+.+.+|+.++++++||||+++++++.+ ...++||||+++|+|.
T Consensus       225 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~  304 (495)
T 1opk_A          225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL  304 (495)
T ss_dssp             EEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHH
T ss_pred             eeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCHH
Confidence            3689999999999999864 7899999997766677889999999999999999999998875 6788999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc--------cCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN--------YAT  192 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~--------~~~  192 (309)
                      +++.......+++..++.++.|++.||.||   |+++++||||||+||+++.++.+||+|||++.....        ..+
T Consensus       305 ~~l~~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~  381 (495)
T 1opk_A          305 DYLRECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF  381 (495)
T ss_dssp             HHHHHSCTTTSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTCCC
T ss_pred             HHHHhcCcCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCChhhEEECCCCcEEEeecccceeccCCceeecCCCcC
Confidence            999765457799999999999999999999   778999999999999999999999999999875432        123


Q ss_pred             CCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccH--HHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          193 MPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDL--IQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       193 ~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      +..|+|||...  ..+.++||||||+++|||++ |..||.+....  ...+..    .     .....+..    ....+
T Consensus       382 ~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~----~-----~~~~~~~~----~~~~l  448 (495)
T 1opk_A          382 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK----D-----YRMERPEG----CPEKV  448 (495)
T ss_dssp             CGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT----T-----CCCCCCTT----CCHHH
T ss_pred             CcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc----C-----CCCCCCCC----CCHHH
Confidence            45799999643  34778999999999999999 99999764321  111111    0     00111111    12456


Q ss_pred             HHHHHHccCCCCCCCCChHHHHHHHhhhhccc
Q 021659          268 LAVARLCIKTKDKPTISIPQISRYLQNEVDIQ  299 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~  299 (309)
                      .+++.+||+.||++|||+.+|++.|+.+.+-.
T Consensus       449 ~~li~~cl~~dP~~RPs~~el~~~L~~~~~~~  480 (495)
T 1opk_A          449 YELMRACWQWNPSDRPSFAEIHQAFETMFQES  480 (495)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHTSCSSS
T ss_pred             HHHHHHHcCcChhHCcCHHHHHHHHHHHHhcc
Confidence            66777999999999999999999999876544

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=4.6e-41  Score=301.12  Aligned_cols=230  Identities=17%  Similarity=0.190  Sum_probs=185.7

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccc----cccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQAL----NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~----~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||+++.. +++.||+|++...    ....+.+.+|+.++++++||||+++++++.+ ...|+||||+++|
T Consensus        11 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~gg   90 (337)
T 1o6l_A           11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   90 (337)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCCC
Confidence            68999999999999974 5899999999542    3345678899999999999999999997764 7788999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc-------ccc
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-------RNY  190 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-------~~~  190 (309)
                      +|.+++..  ...+++..+..++.+++.||.||   |+++++||||||+||+++.++.+||+|||+++..       ...
T Consensus        91 ~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~  165 (337)
T 1o6l_A           91 ELFFHLSR--ERVFTEERARFYGAEIVSALEYL---HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF  165 (337)
T ss_dssp             BHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCC
T ss_pred             cHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCccccc
Confidence            99999976  56799999999999999999999   7789999999999999999999999999998642       233


Q ss_pred             CCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHH
Q 021659          191 ATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL  268 (309)
Q Consensus       191 ~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~  268 (309)
                      .+|+.|+|||...+  .+.++|+||||+++|+|++|+.||.+..............        ...+...    ...+.
T Consensus       166 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~--------~~~p~~~----s~~~~  233 (337)
T 1o6l_A          166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE--------IRFPRTL----SPEAK  233 (337)
T ss_dssp             EECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--------CCCCTTS----CHHHH
T ss_pred             ccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCC--------CCCCCCC----CHHHH
Confidence            57889999997543  4789999999999999999999997654322111111110        1111112    23455


Q ss_pred             HHHHHccCCCCCCCC-----ChHHHHH
Q 021659          269 AVARLCIKTKDKPTI-----SIPQISR  290 (309)
Q Consensus       269 ~l~~~cl~~dp~~Rp-----s~~evl~  290 (309)
                      +++.+||+.||++||     ++.|+++
T Consensus       234 ~li~~lL~~dP~~R~g~~~~~~~ei~~  260 (337)
T 1o6l_A          234 SLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             HHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence            666699999999999     8889874

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=1.9e-41  Score=306.78  Aligned_cols=257  Identities=14%  Similarity=0.126  Sum_probs=193.1

Q ss_pred             cccccCCCceEEEEEEcC------CcEEEEEEecccccc------------HHHHHHHHHHHccCCCCCcceEeeeEeC-
Q 021659           44 RIVYTNSHGAAYKARFQD------GEVALVKEIQALNLE------------KDAFYREIQLLGRLHHRHLLALQGFSTG-  104 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~------~~~va~K~~~~~~~~------------~~~~~~ei~~l~~l~h~niv~~~~~~~~-  104 (309)
                      +.||+|+||.||+|.+..      ++.||+|++......            ...+..|+..+..++||||+++++++.. 
T Consensus        41 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~  120 (364)
T 3op5_A           41 LPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHD  120 (364)
T ss_dssp             EECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEEE
T ss_pred             EEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeeec
Confidence            589999999999999754      478999998543311            1123456667788899999999997643 


Q ss_pred             ----CeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeC--CCCceeE
Q 021659          105 ----RKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLD--ENFTAKL  178 (309)
Q Consensus       105 ----~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~--~~~~~kl  178 (309)
                          ...++||||+ +++|.+++... ...+++..++.++.|++.||.||   |+.+++||||||+||+++  .++.+||
T Consensus       121 ~~~~~~~~lv~e~~-g~~L~~~~~~~-~~~l~~~~~~~i~~qi~~~l~~l---H~~~iiHrDlkp~Nill~~~~~~~~kl  195 (364)
T 3op5_A          121 KNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLRILDILEYI---HEHEYVHGDIKASNLLLNYKNPDQVYL  195 (364)
T ss_dssp             ETTEEEEEEEEECE-EEEHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEEESSCTTCEEE
T ss_pred             cCCcceEEEEEeCC-CCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEEecCCHHHEEEecCCCCeEEE
Confidence                3468999999 88999999752 46799999999999999999999   777999999999999998  8899999


Q ss_pred             eccccccccc--------------ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHH--HH
Q 021659          179 SDVGFFNSVR--------------NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWI--QE  240 (309)
Q Consensus       179 ~dfg~~~~~~--------------~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~--~~  240 (309)
                      +|||++....              ...+|+.|+|||...+  .+.++||||||+++|+|++|+.||.+........  ..
T Consensus       196 ~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~  275 (364)
T 3op5_A          196 VDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSK  275 (364)
T ss_dssp             CCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHH
T ss_pred             EECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHH
Confidence            9999986432              1238899999997544  4788999999999999999999998532222211  11


Q ss_pred             hcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcccccc-cccccc
Q 021659          241 SSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCYK-YSRVSF  308 (309)
Q Consensus       241 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~~~-~~~~~~  308 (309)
                      .........++++.+.....+.   .+.+++.+||..||++||++.+|++.|++.+.....+ ..+.||
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~---~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw  341 (364)
T 3op5_A          276 IRYRENIASLMDKCFPAANAPG---EIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLDL  341 (364)
T ss_dssp             HHHHHCHHHHHHHHSCTTCCCH---HHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCCCCCCC
T ss_pred             HHhhhhHHHHHHHhcccccCHH---HHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCcCCccce
Confidence            1112233444444443222333   4555666999999999999999999999888765554 344444

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=4e-41  Score=291.12  Aligned_cols=240  Identities=18%  Similarity=0.250  Sum_probs=194.8

Q ss_pred             ccccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHHH
Q 021659           43 HRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLKE  121 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~~  121 (309)
                      .+.||+|+||.||++...+++.||+|.+.......+.+.+|++++++++||||+++++++.+ ...++||||+++++|.+
T Consensus        13 ~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   92 (267)
T 3t9t_A           13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSD   92 (267)
T ss_dssp             EEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHH
T ss_pred             eeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHH
Confidence            36899999999999999888899999998777677889999999999999999999998765 67889999999999999


Q ss_pred             hhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc--------ccCCC
Q 021659          122 HLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR--------NYATM  193 (309)
Q Consensus       122 ~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~--------~~~~~  193 (309)
                      ++... ...+++..+..++.+++.||.+|   |+.+++|+||+|+||+++.++.+||+|||++....        ...++
T Consensus        93 ~~~~~-~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  168 (267)
T 3t9t_A           93 YLRTQ-RGLFAAETLLGMCLDVCEGMAYL---EEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP  168 (267)
T ss_dssp             HHHHT-TTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCC
T ss_pred             HHhhC-cccCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCchheEEECCCCCEEEccccccccccccccccccccccc
Confidence            99752 35689999999999999999999   77899999999999999999999999999987542        22445


Q ss_pred             CCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          194 PHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       194 ~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      ..|.|||..  ...+.++||||||+++|+|++ |+.||....... .........      .+..+.. .   ...+.++
T Consensus       169 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-~~~~i~~~~------~~~~~~~-~---~~~l~~l  237 (267)
T 3t9t_A          169 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE-VVEDISTGF------RLYKPRL-A---STHVYQI  237 (267)
T ss_dssp             GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-HHHHHHTTC------CCCCCTT-S---CHHHHHH
T ss_pred             ccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH-HHHHHhcCC------cCCCCcc-C---cHHHHHH
Confidence            679999964  334778999999999999999 899997653322 111111110      0111111 1   2355667


Q ss_pred             HHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          271 ARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       271 ~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                      +.+||+.||++|||+.++++.|+++.+
T Consensus       238 i~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (267)
T 3t9t_A          238 MNHCWRERPEDRPAFSRLLRQLAEIAE  264 (267)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            779999999999999999999998765

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=2.8e-41  Score=295.95  Aligned_cols=242  Identities=24%  Similarity=0.336  Sum_probs=185.6

Q ss_pred             ccccccCCCceEEEEEEcCCcEEEEEEecccccc---HHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCCCCH
Q 021659           43 HRIVYTNSHGAAYKARFQDGEVALVKEIQALNLE---KDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSL  119 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~~sL  119 (309)
                      .+.||+|+||.||+|+..  ..+|+|++......   .+.+.+|++++++++||||+.+++++.....++||||+++++|
T Consensus        29 ~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e~~~~~~L  106 (289)
T 3og7_A           29 GQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSL  106 (289)
T ss_dssp             EEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECCCEEEH
T ss_pred             eeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCCccEEEEEecCCCcH
Confidence            368999999999999863  35899998544333   3568999999999999999999998888888999999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---------cc
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---------NY  190 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---------~~  190 (309)
                      .+++... ...+++..++.++.+++.||.||   |+.+++||||||+||+++.++.+||+|||++....         ..
T Consensus       107 ~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~l---H~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~  182 (289)
T 3og7_A          107 YHHLHAS-ETKFEMKKLIDIARQTARGMDYL---HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQL  182 (289)
T ss_dssp             HHHHTTC----CCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEEETTTEEEECCCC-----------------
T ss_pred             HHHHhhc-cCCCCHHHHHHHHHHHHHHHHHH---HhCCcccccCccceEEECCCCCEEEccceecccccccccccccccc
Confidence            9999653 46799999999999999999999   77899999999999999999999999999986432         23


Q ss_pred             CCCCCCCCCCCCC-----CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHH
Q 021659          191 ATMPHSSCPEDCS-----TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELK  265 (309)
Q Consensus       191 ~~~~~~~~PE~~~-----~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  265 (309)
                      .+++.|+|||...     ..+.++||||||+++++|++|+.||..................     .+.+. ........
T Consensus       183 ~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~  256 (289)
T 3og7_A          183 SGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL-----SPDLS-KVRSNCPK  256 (289)
T ss_dssp             -CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSC-----CCCTT-SSCTTSCH
T ss_pred             CCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhccccc-----Ccchh-hccccCCH
Confidence            5788999999643     2356899999999999999999999865544333222211111     11111 01111234


Q ss_pred             HHHHHHHHccCCCCCCCCChHHHHHHHhhhh
Q 021659          266 KLLAVARLCIKTKDKPTISIPQISRYLQNEV  296 (309)
Q Consensus       266 ~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~  296 (309)
                      .+.+++.+||+.||++|||+.++++.|+++.
T Consensus       257 ~l~~li~~~l~~~p~~Rps~~ell~~L~~l~  287 (289)
T 3og7_A          257 RMKRLMAECLKKKRDERPSFPRILAEIEELA  287 (289)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             HHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence            5667777999999999999999999999765

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=2.2e-41  Score=296.16  Aligned_cols=244  Identities=18%  Similarity=0.221  Sum_probs=186.9

Q ss_pred             ccccccCCCceEEEEEEcC-C-------cEEEEEEecccc-ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEe
Q 021659           43 HRIVYTNSHGAAYKARFQD-G-------EVALVKEIQALN-LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFD  112 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~-~-------~~va~K~~~~~~-~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e  112 (309)
                      .+.||+|+||.||+|.... +       ..||+|.+.... ...+.+.+|++++++++||||+++++++.+ ...++|||
T Consensus        13 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   92 (289)
T 4fvq_A           13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQE   92 (289)
T ss_dssp             EEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEE
T ss_pred             eeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEE
Confidence            4689999999999998643 3       469999985433 345779999999999999999999998765 67789999


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCc--------eeEeccccc
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFT--------AKLSDVGFF  184 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~--------~kl~dfg~~  184 (309)
                      |+++++|.+++... ...+++..+..++.|++.||.||   |+++++||||||+||+++.++.        +||+|||++
T Consensus        93 ~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~  168 (289)
T 4fvq_A           93 FVKFGSLDTYLKKN-KNCINILWKLEVAKQLAAAMHFL---EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS  168 (289)
T ss_dssp             CCTTCBHHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSC
T ss_pred             CCCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHH---hhCCeECCCcCcceEEEecCCcccccccceeeeccCccc
Confidence            99999999999752 34499999999999999999999   7789999999999999988876        999999998


Q ss_pred             ccccc---cCCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCC
Q 021659          185 NSVRN---YATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGS  258 (309)
Q Consensus       185 ~~~~~---~~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  258 (309)
                      .....   ..++..|+|||....   .++++||||||+++|+|++|..|+...................+.        .
T Consensus       169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~--------~  240 (289)
T 4fvq_A          169 ITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPA--------P  240 (289)
T ss_dssp             TTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC--------C
T ss_pred             ccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccCCCCC--------C
Confidence            65432   246788999996543   578899999999999999965554433333222222211111111        1


Q ss_pred             CCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcccccc
Q 021659          259 YDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCYK  302 (309)
Q Consensus       259 ~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~~~  302 (309)
                      .    ...+.+++.+||+.||++|||+.++++.|+++.....++
T Consensus       241 ~----~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~~  280 (289)
T 4fvq_A          241 K----AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVP  280 (289)
T ss_dssp             S----SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC------
T ss_pred             C----CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCCC
Confidence            1    123456777999999999999999999999877765554

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=3.5e-40  Score=293.00  Aligned_cols=250  Identities=17%  Similarity=0.201  Sum_probs=194.0

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeC---CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTG---RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~---~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||+|... +++.||+|++....  ...+.+.+|++++++++||||+++++++..   ...++||||++++
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~   94 (319)
T 4euu_A           15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCG   94 (319)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTC
T ss_pred             EEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCC
Confidence            68999999999999975 48899999986433  335678899999999999999999997754   3678999999999


Q ss_pred             CHHHhhcCCC-CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceee----CCCCceeEeccccccccc----
Q 021659          118 SLKEHLNDPL-KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIML----DENFTAKLSDVGFFNSVR----  188 (309)
Q Consensus       118 sL~~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill----~~~~~~kl~dfg~~~~~~----  188 (309)
                      +|.+++.... ...+++..++.++.|++.||.||   |+.+++||||||+||++    +.++.+||+|||++....    
T Consensus        95 ~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~  171 (319)
T 4euu_A           95 SLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL---RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ  171 (319)
T ss_dssp             BHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCC
T ss_pred             CHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHH---HHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCc
Confidence            9999997632 23499999999999999999999   77899999999999999    788889999999987543    


Q ss_pred             --ccCCCCCCCCCCCC----------CCCCCCCcEeehhhHHHHHHhCCCCCCCCc---cHHHHHHHh---ccccccccc
Q 021659          189 --NYATMPHSSCPEDC----------STQDCSNIIFQLGVLILELVTGQSPEEGDV---DLIQWIQES---SISSSIHRM  250 (309)
Q Consensus       189 --~~~~~~~~~~PE~~----------~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~---~~~~~~~~~---~~~~~~~~~  250 (309)
                        ...+++.|+|||..          ...+.++||||||+++|+|++|+.||....   .....+...   ........+
T Consensus       172 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~  251 (319)
T 4euu_A          172 FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGV  251 (319)
T ss_dssp             BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEE
T ss_pred             eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhh
Confidence              23578899999963          345789999999999999999999996322   111111111   111100000


Q ss_pred             ---------ccCcC--CCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhh
Q 021659          251 ---------IDPDL--GGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEV  296 (309)
Q Consensus       251 ---------~~~~l--~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~  296 (309)
                               ..+.+  ....+......+.+++.+||+.||++|||+.|+++...+..
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~  308 (319)
T 4euu_A          252 QKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL  308 (319)
T ss_dssp             ECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred             hcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence                     00011  12334566777888888999999999999999999887543

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=3.1e-41  Score=300.58  Aligned_cols=234  Identities=17%  Similarity=0.213  Sum_probs=185.0

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      +.||+|+||.||+|... +++.||+|++.....  ..+.+.+|+.+++.++||||+++++++.+ ...++||||+++++|
T Consensus        13 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L   92 (323)
T 3tki_A           13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL   92 (323)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEEG
T ss_pred             eEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCcH
Confidence            68999999999999975 688999999853322  23568899999999999999999998865 677899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---------cc
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---------NY  190 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---------~~  190 (309)
                      .+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....         ..
T Consensus        93 ~~~l~~--~~~~~~~~~~~i~~qi~~aL~~L---H~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  167 (323)
T 3tki_A           93 FDRIEP--DIGMPEPDAQRFFHQLMAGVVYL---HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM  167 (323)
T ss_dssp             GGGSBT--TTBCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCSC
T ss_pred             HHHHhh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCCC
Confidence            999986  56799999999999999999999   77899999999999999999999999999986432         34


Q ss_pred             CCCCCCCCCCCCCCC---CCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          191 ATMPHSSCPEDCSTQ---DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       191 ~~~~~~~~PE~~~~~---~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      .+|+.|+|||.....   +.++||||||+++|+|++|+.||..................   ...+      .......+
T Consensus       168 ~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~---~~~~------~~~~~~~~  238 (323)
T 3tki_A          168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT---YLNP------WKKIDSAP  238 (323)
T ss_dssp             CSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCT---TSTT------GGGSCHHH
T ss_pred             ccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccc---cCCc------cccCCHHH
Confidence            678899999975432   56799999999999999999999765432222211111100   0000      01112445


Q ss_pred             HHHHHHccCCCCCCCCChHHHHHH
Q 021659          268 LAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      .+++.+||+.||++|||+.|+++.
T Consensus       239 ~~li~~~L~~dP~~R~t~~eil~h  262 (323)
T 3tki_A          239 LALLHKILVENPSARITIPDIKKD  262 (323)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             HHHHHHHccCChhhCcCHHHHhhC
Confidence            567779999999999999999864

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=1.3e-40  Score=295.95  Aligned_cols=230  Identities=20%  Similarity=0.250  Sum_probs=187.1

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||+++.. +++.||+|++....    ...+.+.+|+.+++.++||||+++++++.+ ...|+||||+++|
T Consensus        12 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg   91 (318)
T 1fot_A           12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGG   91 (318)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCCC
Confidence            68999999999999974 68999999985432    335678899999999999999999997765 6788999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc----ccCCC
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----NYATM  193 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----~~~~~  193 (309)
                      +|.+++..  ...+++..+..++.+++.||.||   |+.+++||||||+||+++.++.+||+|||++....    ...+|
T Consensus        92 ~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~~~gt  166 (318)
T 1fot_A           92 ELFSLLRK--SQRFPNPVAKFYAAEVCLALEYL---HSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGT  166 (318)
T ss_dssp             BHHHHHHH--TSSCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCSC
T ss_pred             CHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCChheEEEcCCCCEEEeecCcceecCCccccccCC
Confidence            99999976  56799999999999999999999   78899999999999999999999999999987543    34688


Q ss_pred             CCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHH
Q 021659          194 PHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVA  271 (309)
Q Consensus       194 ~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~  271 (309)
                      +.|+|||...  ..+.++|+||||+++|+|++|+.||................        ...+...    ...+.+++
T Consensus       167 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~--------~~~p~~~----~~~~~~li  234 (318)
T 1fot_A          167 PDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAE--------LRFPPFF----NEDVKDLL  234 (318)
T ss_dssp             TTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCC--------CCCCTTS----CHHHHHHH
T ss_pred             ccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--------CCCCCCC----CHHHHHHH
Confidence            9999999643  35789999999999999999999997654332222111111        1111111    23455666


Q ss_pred             HHccCCCCCCCC-----ChHHHHH
Q 021659          272 RLCIKTKDKPTI-----SIPQISR  290 (309)
Q Consensus       272 ~~cl~~dp~~Rp-----s~~evl~  290 (309)
                      .+||..||++||     ++.|+++
T Consensus       235 ~~lL~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          235 SRLITRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             HHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             HHHhccCHHHcCCCcCCCHHHHhc
Confidence            699999999999     8888883

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.4e-40  Score=292.74  Aligned_cols=232  Identities=20%  Similarity=0.264  Sum_probs=179.8

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEeccccc---------------------------cHHHHHHHHHHHccCCCCC
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQALNL---------------------------EKDAFYREIQLLGRLHHRH   94 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~---------------------------~~~~~~~ei~~l~~l~h~n   94 (309)
                      .+.||+|+||.||+|.. .+++.||+|++.....                           ..+.+.+|++++++++|||
T Consensus        18 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~   97 (298)
T 2zv2_A           18 KDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPN   97 (298)
T ss_dssp             EEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTT
T ss_pred             EeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCC
Confidence            36899999999999997 4588999999854321                           1245889999999999999


Q ss_pred             cceEeeeEeC---CeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeC
Q 021659           95 LLALQGFSTG---RKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLD  171 (309)
Q Consensus        95 iv~~~~~~~~---~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~  171 (309)
                      |+++++++.+   ...++||||+++++|.+++.   ...+++..+..++.|++.||.||   |+.+++||||||+||+++
T Consensus        98 iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dlkp~Nil~~  171 (298)
T 2zv2_A           98 VVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT---LKPLSEDQARFYFQDLIKGIEYL---HYQKIIHRDIKPSNLLVG  171 (298)
T ss_dssp             BCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC---SSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEEC
T ss_pred             CCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHEEEC
Confidence            9999998753   56789999999999988765   36799999999999999999999   777999999999999999


Q ss_pred             CCCceeEeccccccccc-------ccCCCCCCCCCCCCCCC-----CCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHH
Q 021659          172 ENFTAKLSDVGFFNSVR-------NYATMPHSSCPEDCSTQ-----DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQ  239 (309)
Q Consensus       172 ~~~~~kl~dfg~~~~~~-------~~~~~~~~~~PE~~~~~-----~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~  239 (309)
                      .++.+||+|||++....       ...+|+.|+|||.....     +.++||||||+++|+|++|+.||....... ...
T Consensus       172 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~  250 (298)
T 2zv2_A          172 EDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC-LHS  250 (298)
T ss_dssp             TTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHH
T ss_pred             CCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHH-HHH
Confidence            99999999999986543       34678899999976542     567899999999999999999997654321 111


Q ss_pred             HhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          240 ESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       240 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .... ... ..  +. ... .   ...+.+++.+||+.||++|||+.|+++
T Consensus       251 ~~~~-~~~-~~--~~-~~~-~---~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          251 KIKS-QAL-EF--PD-QPD-I---AEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             HHHH-CCC-CC--CS-SSC-C---CHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHhc-ccC-CC--CC-ccc-c---CHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence            1111 000 00  10 011 1   234566777999999999999999874

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=6.6e-42  Score=299.37  Aligned_cols=241  Identities=17%  Similarity=0.265  Sum_probs=195.4

Q ss_pred             ccccccCCCceEEEEEEcC-CcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           43 HRIVYTNSHGAAYKARFQD-GEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~-~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      .+.||+|+||.||+|.... +..||+|.+.......+.+.+|++++++++||||+++++++.+ ...++||||+++++|.
T Consensus        18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~   97 (288)
T 3kfa_A           18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL   97 (288)
T ss_dssp             EEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEHH
T ss_pred             EeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcHH
Confidence            3689999999999999854 7889999997766667889999999999999999999998865 6678999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccccc--------CC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNY--------AT  192 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~--------~~  192 (309)
                      +++.......+++..++.++.+++.||.||   |+.+++|+||||+||+++.++.++|+|||++......        .+
T Consensus        98 ~~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~  174 (288)
T 3kfa_A           98 DYLRECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF  174 (288)
T ss_dssp             HHHHHCCTTTSCHHHHHHHHHHHHHHHHHH---HHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETTEEE
T ss_pred             HHHHhcccCCccHhHHHHHHHHHHHHHHHH---HHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccCCcc
Confidence            999765567799999999999999999999   6779999999999999999999999999998754322        23


Q ss_pred             CCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccH--HHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          193 MPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDL--IQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       193 ~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ++.|.|||..  ...+.++||||||+++++|++ |..||......  ...+...         .........    ...+
T Consensus       175 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~---------~~~~~~~~~----~~~l  241 (288)
T 3kfa_A          175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD---------YRMERPEGC----PEKV  241 (288)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT---------CCCCCCTTC----CHHH
T ss_pred             ccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcc---------CCCCCCCCC----CHHH
Confidence            4579999964  334778999999999999999 99999754321  1111111         011111111    2456


Q ss_pred             HHHHHHccCCCCCCCCChHHHHHHHhhhhccc
Q 021659          268 LAVARLCIKTKDKPTISIPQISRYLQNEVDIQ  299 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~  299 (309)
                      .+++.+||..||++|||+.++++.|+.+..-.
T Consensus       242 ~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~  273 (288)
T 3kfa_A          242 YELMRACWQWNPSDRPSFAEIHQAFETMFQES  273 (288)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence            67777999999999999999999998876543

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=4.7e-41  Score=312.47  Aligned_cols=237  Identities=18%  Similarity=0.268  Sum_probs=190.9

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC--CeeEEEEeeCCCCCHHH
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG--RKRLLVFDNIENGSLKE  121 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~--~~~~lv~e~~~~~sL~~  121 (309)
                      +.||+|+||.||+|.+. ++.||+|.+.... ..+.+.+|+.++++++||||+++++++..  ...++||||+++|+|.+
T Consensus       199 ~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~  276 (450)
T 1k9a_A          199 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD  276 (450)
T ss_dssp             EEEEECSSEEEEEEEET-TEEEEEEEESSCT-TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHH
T ss_pred             eeecCcCCeeEEEEEec-CCeEEEEEeCCch-HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHH
Confidence            58999999999999985 7799999997544 56789999999999999999999998754  36789999999999999


Q ss_pred             hhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc----cCCCCCCC
Q 021659          122 HLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN----YATMPHSS  197 (309)
Q Consensus       122 ~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~----~~~~~~~~  197 (309)
                      ++.......+++..++.++.|++.||.||   |+++++||||||+||+++.++.+||+|||++.....    ..++..|+
T Consensus       277 ~l~~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~y~  353 (450)
T 1k9a_A          277 YLRSRGRSVLGGDCLLKFSLDVCEAMEYL---EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT  353 (450)
T ss_dssp             HHHHHCTTTCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC------CCCTTTS
T ss_pred             HHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCCCCccee
Confidence            99864445589999999999999999999   778999999999999999999999999999874432    34567899


Q ss_pred             CCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCcc--HHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHH
Q 021659          198 CPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVD--LIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVAR  272 (309)
Q Consensus       198 ~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~  272 (309)
                      |||...  ..+.++||||||+++|||++ |+.||.....  ....+..    +.     ....+...    ...+.+++.
T Consensus       354 aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~----~~-----~~~~p~~~----~~~l~~li~  420 (450)
T 1k9a_A          354 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK----GY-----KMDAPDGC----PPAVYDVMK  420 (450)
T ss_dssp             CHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHT----TC-----CCCCCTTC----CHHHHHHHH
T ss_pred             CHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc----CC-----CCCCCCcC----CHHHHHHHH
Confidence            999643  35788999999999999998 9999975432  2222211    10     11111112    245566777


Q ss_pred             HccCCCCCCCCChHHHHHHHhhhhcc
Q 021659          273 LCIKTKDKPTISIPQISRYLQNEVDI  298 (309)
Q Consensus       273 ~cl~~dp~~Rps~~evl~~L~~~~~~  298 (309)
                      +||+.||++|||+.++++.|+.+...
T Consensus       421 ~cl~~dp~~Rpt~~~l~~~L~~i~~~  446 (450)
T 1k9a_A          421 NCWHLDAATRPTFLQLREQLEHIRTH  446 (450)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHcCCChhHCcCHHHHHHHHHHHHHh
Confidence            99999999999999999999876543

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=8e-41  Score=289.52  Aligned_cols=241  Identities=20%  Similarity=0.289  Sum_probs=191.8

Q ss_pred             ccccccCCCceEEEEEEcCCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC---CeeEEEEeeCCC
Q 021659           43 HRIVYTNSHGAAYKARFQDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG---RKRLLVFDNIEN  116 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~---~~~~lv~e~~~~  116 (309)
                      .+.||+|+||.||+|++. +..||+|++.....   ..+.+.+|+.++++++||||+++++++.+   ...++||||+++
T Consensus        15 ~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~   93 (271)
T 3kmu_A           15 LTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPY   93 (271)
T ss_dssp             EEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTT
T ss_pred             HHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCC
Confidence            368999999999999985 78899999865432   24578999999999999999999998764   466899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCC--eeecccCCCceeeCCCCceeEecccccc--cccccCC
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLP--MYYVSISSSSIMLDENFTAKLSDVGFFN--SVRNYAT  192 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~--i~H~dl~p~nill~~~~~~kl~dfg~~~--~~~~~~~  192 (309)
                      ++|.+++.......+++..++.++.|++.||.||   |+.+  ++|+||||+||+++.++.++++|||++.  ......+
T Consensus        94 ~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~  170 (271)
T 3kmu_A           94 GSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFL---HTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMY  170 (271)
T ss_dssp             CBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHH---TTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCTTCBS
T ss_pred             CcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHH---hcCCCceecCCCccceEEEcCCcceeEEeccceeeecccCccC
Confidence            9999999875455799999999999999999999   7777  9999999999999999999999877654  3344577


Q ss_pred             CCCCCCCCCCCCC--C---CCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          193 MPHSSCPEDCSTQ--D---CSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       193 ~~~~~~PE~~~~~--~---~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      |+.|+|||...+.  +   .++||||||+++|+|++|+.||.............. ..     ..+......    ...+
T Consensus       171 t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~-----~~~~~~~~~----~~~~  240 (271)
T 3kmu_A          171 APAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVAL-EG-----LRPTIPPGI----SPHV  240 (271)
T ss_dssp             CGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHH-SC-----CCCCCCTTC----CHHH
T ss_pred             CccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHh-cC-----CCCCCCCCC----CHHH
Confidence            8999999975432  2   369999999999999999999986544332221111 11     111222222    2346


Q ss_pred             HHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          268 LAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                      .+++.+||+.||++|||+.++++.|+++.+
T Consensus       241 ~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          241 SKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            667779999999999999999999997653

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=1.6e-40  Score=307.83  Aligned_cols=235  Identities=14%  Similarity=0.164  Sum_probs=184.4

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      .+.||+|+||.||++.. .+++.+|+|.+.....   ..+.+.+|++++++++||||+++++++.+ ...++||||+++|
T Consensus        16 ~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg   95 (444)
T 3soa_A           16 FEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGG   95 (444)
T ss_dssp             EEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCC
T ss_pred             EEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCC
Confidence            36899999999999986 4688999999854432   34568899999999999999999997765 6788999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeC---CCCceeEeccccccccc------
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLD---ENFTAKLSDVGFFNSVR------  188 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~---~~~~~kl~dfg~~~~~~------  188 (309)
                      +|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++   .++.+||+|||++....      
T Consensus        96 ~L~~~i~~--~~~~~e~~~~~i~~qil~aL~~l---H~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~~  170 (444)
T 3soa_A           96 ELFEDIVA--REYYSEADASHCIQQILEAVLHC---HQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAW  170 (444)
T ss_dssp             BHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCBC
T ss_pred             CHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCcee
Confidence            99999876  56799999999999999999999   778999999999999998   45789999999986543      


Q ss_pred             -ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHH
Q 021659          189 -NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELK  265 (309)
Q Consensus       189 -~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  265 (309)
                       ...+|+.|+|||....  ++.++||||||+++|+|++|..||.+...............   ....+.. .. .   ..
T Consensus       171 ~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~---~~~~~~~-~~-~---s~  242 (444)
T 3soa_A          171 FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAY---DFPSPEW-DT-V---TP  242 (444)
T ss_dssp             CCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC---CCCTTTT-TT-S---CH
T ss_pred             ecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCC---CCCcccc-cc-C---CH
Confidence             2467899999997543  57889999999999999999999976543222111111100   0111110 11 1   23


Q ss_pred             HHHHHHHHccCCCCCCCCChHHHHH
Q 021659          266 KLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       266 ~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .+.+++.+||+.||++|||+.|+++
T Consensus       243 ~~~~li~~~L~~dP~~Rpta~e~L~  267 (444)
T 3soa_A          243 EAKDLINKMLTINPSKRITAAEALK  267 (444)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCCCHHHHhc
Confidence            4556666999999999999999986

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=1.6e-40  Score=300.47  Aligned_cols=235  Identities=16%  Similarity=0.176  Sum_probs=185.5

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccccc---HHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLE---KDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~s  118 (309)
                      +.||+|+||.||++... +++.||+|++......   .+.+.+|+.++++++||||+++++++.+ ...++||||+++++
T Consensus        35 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg~  114 (362)
T 2bdw_A           35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE  114 (362)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             eEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCC
Confidence            68999999999999974 5889999999654332   3568899999999999999999997765 67889999999999


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC---CceeEeccccccccc------c
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN---FTAKLSDVGFFNSVR------N  189 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~---~~~kl~dfg~~~~~~------~  189 (309)
                      |.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.+   +.+||+|||++....      .
T Consensus       115 L~~~l~~--~~~~~~~~~~~~~~qi~~al~~l---H~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~~~  189 (362)
T 2bdw_A          115 LFEDIVA--REFYSEADASHCIQQILESIAYC---HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG  189 (362)
T ss_dssp             HHHHHTT--CSCCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSCCC
T ss_pred             HHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCccccc
Confidence            9999976  56799999999999999999999   77899999999999999865   459999999986543      2


Q ss_pred             cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          190 YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ..+|+.|+|||....  .+.++|||||||++|+|++|+.||.+.................   ..+.     .......+
T Consensus       190 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~---~~~~-----~~~~~~~~  261 (362)
T 2bdw_A          190 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY---PSPE-----WDTVTPEA  261 (362)
T ss_dssp             SCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC---CTTG-----GGGSCHHH
T ss_pred             CCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCC---Cccc-----ccCCCHHH
Confidence            468899999997543  5788999999999999999999997654322111111110000   0000     01112445


Q ss_pred             HHHHHHccCCCCCCCCChHHHHHH
Q 021659          268 LAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      .+++.+||..||++|||+.++++.
T Consensus       262 ~~li~~~L~~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          262 KSLIDSMLTVNPKKRITADQALKV  285 (362)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             HHHHHHHcCCChhhCcCHHHHhcC
Confidence            667779999999999999998853

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.1e-41  Score=301.42  Aligned_cols=250  Identities=18%  Similarity=0.255  Sum_probs=188.5

Q ss_pred             ccccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccC--CCCCcceEeeeEeC-----CeeEEEEeeCC
Q 021659           43 HRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRL--HHRHLLALQGFSTG-----RKRLLVFDNIE  115 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l--~h~niv~~~~~~~~-----~~~~lv~e~~~  115 (309)
                      .+.||+|+||.||+|+.. ++.||+|++....  ...+..|.+++..+  +||||+++++++..     ...++||||++
T Consensus        42 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~  118 (337)
T 3mdy_A           42 VKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE--EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHE  118 (337)
T ss_dssp             EEEEEEETTEEEEEEEET-TEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCT
T ss_pred             EeEeecCCCeEEEEEEEC-CceEEEEEEeccc--cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccC
Confidence            368999999999999985 8899999985433  34455566666555  89999999997643     46789999999


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhc-----CCCCeeecccCCCceeeCCCCceeEeccccccccc--
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLF-----SNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR--  188 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~-----h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~--  188 (309)
                      +++|.+++..   ..+++..++.++.+++.||.|||..     +..+++||||||+||+++.++.+||+|||++....  
T Consensus       119 ~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~  195 (337)
T 3mdy_A          119 NGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISD  195 (337)
T ss_dssp             TCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC--
T ss_pred             CCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeeccc
Confidence            9999999975   5699999999999999999999432     12399999999999999999999999999985432  


Q ss_pred             ---------ccCCCCCCCCCCCCCCC--CCC------CcEeehhhHHHHHHhC----------CCCCCCCc---cHHHHH
Q 021659          189 ---------NYATMPHSSCPEDCSTQ--DCS------NIIFQLGVLILELVTG----------QSPEEGDV---DLIQWI  238 (309)
Q Consensus       189 ---------~~~~~~~~~~PE~~~~~--~~~------~Dv~slG~~l~~l~tg----------~~p~~~~~---~~~~~~  238 (309)
                               ...+|+.|+|||.....  ...      +||||||+++|+|++|          +.||....   ......
T Consensus       196 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~  275 (337)
T 3mdy_A          196 TNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDM  275 (337)
T ss_dssp             -------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHH
T ss_pred             cccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhh
Confidence                     23578899999975432  233      8999999999999999          66665321   111111


Q ss_pred             HHhcccccccccccCcCCCCC-CHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcccccc
Q 021659          239 QESSISSSIHRMIDPDLGGSY-DSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCYK  302 (309)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~~-~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~~~  302 (309)
                      ......    ....+..+... .......+.+++.+||+.||++|||+.++++.|+.+.+.+..+
T Consensus       276 ~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~  336 (337)
T 3mdy_A          276 REIVCI----KKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDIK  336 (337)
T ss_dssp             HHHHTT----SCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTTCC
T ss_pred             HHHHhh----hccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcccC
Confidence            111111    11112222111 1245677888888999999999999999999999988876543

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=3.8e-41  Score=305.82  Aligned_cols=240  Identities=17%  Similarity=0.278  Sum_probs=182.4

Q ss_pred             cccccCCCceEEEEEEc----CCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ----DGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~----~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||+|+..    ++..||+|.+....  ...+.+.+|+.++++++||||+++++++.+ ...++||||+++
T Consensus        51 ~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  130 (373)
T 2qol_A           51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMEN  130 (373)
T ss_dssp             EEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred             eEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCCC
Confidence            58999999999999864    46789999986432  234578999999999999999999998865 677899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccccc------
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNY------  190 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~------  190 (309)
                      ++|.+++... ...+++..++.++.+++.||.||   |+.+++||||||+||+++.++.+||+|||++......      
T Consensus       131 ~sL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~  206 (373)
T 2qol_A          131 GSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYT  206 (373)
T ss_dssp             CBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTCCEEECCC---------------
T ss_pred             CcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHH---HHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCcccee
Confidence            9999999753 35799999999999999999999   7789999999999999999999999999998754321      


Q ss_pred             ----CCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHH
Q 021659          191 ----ATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKE  263 (309)
Q Consensus       191 ----~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  263 (309)
                          .++..|+|||..  ...+.++||||||+++|||++ |+.||....... ..........      .....    ..
T Consensus       207 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~-~~~~i~~~~~------~~~~~----~~  275 (373)
T 2qol_A          207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD-VIKAVDEGYR------LPPPM----DC  275 (373)
T ss_dssp             -------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH-HHHHHHTTEE------CCCCT----TC
T ss_pred             ccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHcCCC------CCCCc----cc
Confidence                234579999964  335778999999999999998 999997653221 1111111100      00111    12


Q ss_pred             HHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcc
Q 021659          264 LKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDI  298 (309)
Q Consensus       264 ~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~  298 (309)
                      ...+.+++.+||+.||++||++.++++.|+++...
T Consensus       276 ~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~  310 (373)
T 2qol_A          276 PAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN  310 (373)
T ss_dssp             BHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             cHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence            34566777799999999999999999999887653

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=1.8e-41  Score=297.94  Aligned_cols=251  Identities=18%  Similarity=0.257  Sum_probs=187.4

Q ss_pred             ccccccCCCceEEEEEE-----cCCcEEEEEEeccccc-cHHHHHHHHHHHccCCCCCcceEeeeEeC---CeeEEEEee
Q 021659           43 HRIVYTNSHGAAYKARF-----QDGEVALVKEIQALNL-EKDAFYREIQLLGRLHHRHLLALQGFSTG---RKRLLVFDN  113 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-----~~~~~va~K~~~~~~~-~~~~~~~ei~~l~~l~h~niv~~~~~~~~---~~~~lv~e~  113 (309)
                      .+.||+|+||.||++++     .+++.||+|++..... ..+.+.+|++++++++||||+++++++..   ...++||||
T Consensus        15 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~   94 (295)
T 3ugc_A           15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY   94 (295)
T ss_dssp             EEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEEC
T ss_pred             hheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEe
Confidence            36899999999999984     3578999999864432 24578999999999999999999998743   457899999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc----
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN----  189 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~----  189 (309)
                      +++++|.+++... ...+++..++.++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++.....    
T Consensus        95 ~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  170 (295)
T 3ugc_A           95 LPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEF  170 (295)
T ss_dssp             CTTCBHHHHHHHC-GGGCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEEETTEEEECCCCSCC--------
T ss_pred             CCCCCHHHHHHhc-ccccCHHHHHHHHHHHHHHHHHH---hcCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCcce
Confidence            9999999999753 34599999999999999999999   778999999999999999999999999999875432    


Q ss_pred             ------cCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccc-----cccccccCcCC
Q 021659          190 ------YATMPHSSCPEDC--STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISS-----SIHRMIDPDLG  256 (309)
Q Consensus       190 ------~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~  256 (309)
                            ..++..|+|||..  ...++++||||||+++++|++|..|+.................     .....+.....
T Consensus       171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (295)
T 3ugc_A          171 FKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR  250 (295)
T ss_dssp             -----CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCC
T ss_pred             eeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCc
Confidence                  2344569999964  3347889999999999999999999865322111000000000     00000000000


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          257 GSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       257 ~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                      ..........+.+++.+||+.||++|||+.|+++.|+.+.+
T Consensus       251 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~  291 (295)
T 3ugc_A          251 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD  291 (295)
T ss_dssp             CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence            01111123456667779999999999999999999997754

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=6.3e-41  Score=293.39  Aligned_cols=246  Identities=14%  Similarity=0.159  Sum_probs=196.1

Q ss_pred             cccccCCCceEEEEEEc---CCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ---DGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~---~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~~s  118 (309)
                      +.||+|+||.||+|.+.   ++..||+|.+....  ...+.+.+|++++++++||||+++++++.....++||||+++++
T Consensus        16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~   95 (287)
T 1u59_A           16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGP   95 (287)
T ss_dssp             EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTEE
T ss_pred             ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecCCCcEEEEEeCCCCC
Confidence            37999999999999853   57789999996532  23467899999999999999999999988788899999999999


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc---------
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN---------  189 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~---------  189 (309)
                      |.+++... ...+++..+..++.+++.||.+|   |+.+++||||+|+||+++.++.+||+|||++.....         
T Consensus        96 L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  171 (287)
T 1u59_A           96 LHKFLVGK-REEIPVSNVAELLHQVSMGMKYL---EEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS  171 (287)
T ss_dssp             HHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCC
T ss_pred             HHHHHHhC-CccCCHHHHHHHHHHHHHHHHHH---HHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccc
Confidence            99999642 46699999999999999999999   778999999999999999999999999999865431         


Q ss_pred             -cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHH
Q 021659          190 -YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELK  265 (309)
Q Consensus       190 -~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  265 (309)
                       ..+++.|+|||...  ..+.++||||||+++++|++ |+.||........ ...... ..     .+......    ..
T Consensus       172 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-~~~i~~-~~-----~~~~~~~~----~~  240 (287)
T 1u59_A          172 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV-MAFIEQ-GK-----RMECPPEC----PP  240 (287)
T ss_dssp             SSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHH-HHHHHT-TC-----CCCCCTTC----CH
T ss_pred             cccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH-HHHHhc-CC-----cCCCCCCc----CH
Confidence             23456799999653  34788999999999999998 9999976543221 111111 11     11111122    24


Q ss_pred             HHHHHHHHccCCCCCCCCChHHHHHHHhhhhcccccccc
Q 021659          266 KLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCYKYS  304 (309)
Q Consensus       266 ~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~~~~~  304 (309)
                      .+.+++.+||..||++||++.++++.|+++......+..
T Consensus       241 ~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~~  279 (287)
T 1u59_A          241 ELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVE  279 (287)
T ss_dssp             HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTCS
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCccc
Confidence            566677799999999999999999999988776665543

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=4.1e-41  Score=304.29  Aligned_cols=234  Identities=16%  Similarity=0.175  Sum_probs=179.5

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHHH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLKE  121 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~~  121 (309)
                      +.||+|+||.||+++.. +++.||+|++.......+.+.+|+.++++++||||+++++++.+ ...++||||+++++|.+
T Consensus        26 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~  105 (361)
T 3uc3_A           26 KDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYE  105 (361)
T ss_dssp             EEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHH
T ss_pred             EEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHH
Confidence            68999999999999975 68999999997666666789999999999999999999997765 67889999999999999


Q ss_pred             hhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCc--eeEecccccccc------cccCCC
Q 021659          122 HLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFT--AKLSDVGFFNSV------RNYATM  193 (309)
Q Consensus       122 ~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~--~kl~dfg~~~~~------~~~~~~  193 (309)
                      ++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.  +||+|||++...      ....+|
T Consensus       106 ~l~~--~~~~~~~~~~~i~~ql~~~L~~L---H~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt  180 (361)
T 3uc3_A          106 RICN--AGRFSEDEARFFFQQLLSGVSYC---HSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGT  180 (361)
T ss_dssp             HHHH--HSSCCHHHHHHHHHHHHHHHHHH---HHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC---------------
T ss_pred             HHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCCCcCC
Confidence            9875  46799999999999999999999   7789999999999999987765  999999988632      234688


Q ss_pred             CCCCCCCCCCCC---CCCCcEeehhhHHHHHHhCCCCCCCCcc---HHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          194 PHSSCPEDCSTQ---DCSNIIFQLGVLILELVTGQSPEEGDVD---LIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       194 ~~~~~PE~~~~~---~~~~Dv~slG~~l~~l~tg~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      +.|+|||.....   +.++|||||||++|+|++|+.||.+...   ............       ...+...  .....+
T Consensus       181 ~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~-------~~~~~~~--~~s~~~  251 (361)
T 3uc3_A          181 PAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVK-------YSIPDDI--RISPEC  251 (361)
T ss_dssp             CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTC-------CCCCTTS--CCCHHH
T ss_pred             CCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCC-------CCCCCcC--CCCHHH
Confidence            999999975333   3448999999999999999999975422   122221111100       0011100  012345


Q ss_pred             HHHHHHccCCCCCCCCChHHHHHH
Q 021659          268 LAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      .+++.+||+.||++|||+.|+++.
T Consensus       252 ~~li~~~L~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          252 CHLISRIFVADPATRISIPEIKTH  275 (361)
T ss_dssp             HHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHHHHHccCChhHCcCHHHHHhC
Confidence            566679999999999999999853

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=2.2e-41  Score=299.52  Aligned_cols=238  Identities=18%  Similarity=0.262  Sum_probs=188.2

Q ss_pred             cccccCCCceEEEEEE------cCCcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeC
Q 021659           44 RIVYTNSHGAAYKARF------QDGEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNI  114 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~------~~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~  114 (309)
                      +.||+|+||.||++..      .++..||+|.+.....  ..+.+.+|++++++++||||+++++++.+ ...++||||+
T Consensus        29 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~  108 (314)
T 2ivs_A           29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYA  108 (314)
T ss_dssp             EEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             eeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEeec
Confidence            6899999999999986      2347899999864332  23578899999999999999999998765 6788999999


Q ss_pred             CCCCHHHhhcCCC----------------------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC
Q 021659          115 ENGSLKEHLNDPL----------------------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE  172 (309)
Q Consensus       115 ~~~sL~~~i~~~~----------------------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~  172 (309)
                      ++++|.+++....                      ...+++..++.++.|++.||.||   |+.+++||||||+||+++.
T Consensus       109 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~dikp~NIli~~  185 (314)
T 2ivs_A          109 KYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAE  185 (314)
T ss_dssp             TTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEET
T ss_pred             CCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHH---HHCCCcccccchheEEEcC
Confidence            9999999997532                      13488999999999999999999   7789999999999999999


Q ss_pred             CCceeEeccccccccc---------ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHh-CCCCCCCCccH--HHHH
Q 021659          173 NFTAKLSDVGFFNSVR---------NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVT-GQSPEEGDVDL--IQWI  238 (309)
Q Consensus       173 ~~~~kl~dfg~~~~~~---------~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~--~~~~  238 (309)
                      ++.+||+|||++....         ...+++.|+|||...+  .+.++||||||+++|+|++ |..||.+....  ...+
T Consensus       186 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~  265 (314)
T 2ivs_A          186 GRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLL  265 (314)
T ss_dssp             TTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH
T ss_pred             CCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHh
Confidence            9999999999986442         2234567999996433  4788999999999999999 99999764321  1111


Q ss_pred             HHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          239 QESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                      ...    .     .+......    ...+.+++.+||+.||++|||+.++++.|++++.
T Consensus       266 ~~~----~-----~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  311 (314)
T 2ivs_A          266 KTG----H-----RMERPDNC----SEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV  311 (314)
T ss_dssp             HTT----C-----CCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hcC----C-----cCCCCccC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            111    0     01111111    2456677779999999999999999999998764

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=7.1e-41  Score=304.96  Aligned_cols=245  Identities=18%  Similarity=0.230  Sum_probs=192.0

Q ss_pred             cccccCCCceEEEEEEc--------CCcEEEEEEeccccc--cHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEE
Q 021659           44 RIVYTNSHGAAYKARFQ--------DGEVALVKEIQALNL--EKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVF  111 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~--------~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~  111 (309)
                      +.||+|+||.||+|...        .+..||+|++.....  ..+.+.+|+++++++ +||||+++++++.. ...++||
T Consensus        75 ~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~  154 (382)
T 3tt0_A           75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIV  154 (382)
T ss_dssp             EEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             eEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEEE
Confidence            68999999999999852        235799999864432  235788999999999 89999999998865 6788999


Q ss_pred             eeCCCCCHHHhhcCCC--------------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCcee
Q 021659          112 DNIENGSLKEHLNDPL--------------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAK  177 (309)
Q Consensus       112 e~~~~~sL~~~i~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~k  177 (309)
                      ||+++++|.+++....              ...+++..++.++.|++.||.||   |+.+++||||||+||+++.++.+|
T Consensus       155 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~k  231 (382)
T 3tt0_A          155 EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMK  231 (382)
T ss_dssp             ECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTCCEE
T ss_pred             EecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHH---HhCCEecCCCCcceEEEcCCCcEE
Confidence            9999999999997532              24599999999999999999999   777999999999999999999999


Q ss_pred             Eecccccccccc---------cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccc
Q 021659          178 LSDVGFFNSVRN---------YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISS  245 (309)
Q Consensus       178 l~dfg~~~~~~~---------~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~  245 (309)
                      |+|||++.....         ..+++.|+|||...  ..+.++||||||+++++|++ |..||.+... ......... .
T Consensus       232 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~-~~~~~~~~~-~  309 (382)
T 3tt0_A          232 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-EELFKLLKE-G  309 (382)
T ss_dssp             ECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-HHHHHHHHT-T
T ss_pred             EcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHc-C
Confidence            999999874432         23456799999643  34778999999999999999 9999976432 222211111 1


Q ss_pred             cccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcccccc
Q 021659          246 SIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCYK  302 (309)
Q Consensus       246 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~~~  302 (309)
                      .     .+......    ...+.+++.+||+.||++|||+.|+++.|+++.......
T Consensus       310 ~-----~~~~~~~~----~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~  357 (382)
T 3tt0_A          310 H-----RMDKPSNC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQ  357 (382)
T ss_dssp             C-----CCCCCSSC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSC
T ss_pred             C-----CCCCCccC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcC
Confidence            1     11111111    235666777999999999999999999999888765443

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=6.2e-41  Score=290.65  Aligned_cols=238  Identities=20%  Similarity=0.246  Sum_probs=180.5

Q ss_pred             ccccccCCCceEEEEEEcCCcEEEEEEeccccc-----cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           43 HRIVYTNSHGAAYKARFQDGEVALVKEIQALNL-----EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~-----~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      .+.||+|+||.||+|.+. ++.||+|.+.....     ..+.+.+|+++++.++||||+++++++.+ ...++||||+++
T Consensus        12 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   90 (271)
T 3dtc_A           12 EEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARG   90 (271)
T ss_dssp             EEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTT
T ss_pred             eeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCC
Confidence            368999999999999974 78899999854322     23678899999999999999999998765 667899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC--------CCceeEeccccccccc
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE--------NFTAKLSDVGFFNSVR  188 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~--------~~~~kl~dfg~~~~~~  188 (309)
                      ++|.+++..   ..+++..++.++.|++.||.|||.....+++||||||+||+++.        ++.+||+|||++....
T Consensus        91 ~~L~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~  167 (271)
T 3dtc_A           91 GPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH  167 (271)
T ss_dssp             EEHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-----
T ss_pred             CCHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccccc
Confidence            999999964   67999999999999999999995432223999999999999986        6789999999986433


Q ss_pred             -----ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCH
Q 021659          189 -----NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDS  261 (309)
Q Consensus       189 -----~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  261 (309)
                           ...+++.|+|||...  ..++++||||||+++++|++|+.||.+..............      .........  
T Consensus       168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~--  239 (271)
T 3dtc_A          168 RTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNK------LALPIPSTC--  239 (271)
T ss_dssp             --------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSC------CCCCCCTTC--
T ss_pred             cccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCC------CCCCCCccc--
Confidence                 346788999999643  34778999999999999999999998754433222211110      011111111  


Q ss_pred             HHHHHHHHHHHHccCCCCCCCCChHHHHHHHhh
Q 021659          262 KELKKLLAVARLCIKTKDKPTISIPQISRYLQN  294 (309)
Q Consensus       262 ~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~  294 (309)
                        ...+.+++.+||+.||++|||+.|+++.|++
T Consensus       240 --~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~  270 (271)
T 3dtc_A          240 --PEPFAKLMEDCWNPDPHSRPSFTNILDQLTT  270 (271)
T ss_dssp             --CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred             --CHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence              2456667779999999999999999999985

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=2.5e-40  Score=293.22  Aligned_cols=242  Identities=19%  Similarity=0.188  Sum_probs=183.7

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEecccccc---HHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLE---KDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      +.||+|+||.||+|+..+++.||+|++......   .+.+.+|++++++++||||+++++++.+ ...++||||+++ +|
T Consensus        27 ~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~l  105 (311)
T 3niz_A           27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DL  105 (311)
T ss_dssp             EEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCSE-EH
T ss_pred             hhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCCC-CH
Confidence            589999999999999988999999998543322   3578899999999999999999998765 677899999986 88


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYAT  192 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~~  192 (309)
                      .+.+... ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....       ...+
T Consensus       106 ~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  181 (311)
T 3niz_A          106 KKVLDEN-KTGLQDSQIKIYLYQLLRGVAHC---HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV  181 (311)
T ss_dssp             HHHHHTC-TTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---CCCC
T ss_pred             HHHHHhc-cCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcccccCCcc
Confidence            8877653 45699999999999999999999   77899999999999999999999999999986543       2357


Q ss_pred             CCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHH--HHHHhccccc---cccc------ccCcCC--
Q 021659          193 MPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQ--WIQESSISSS---IHRM------IDPDLG--  256 (309)
Q Consensus       193 ~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~--~~~~~~~~~~---~~~~------~~~~l~--  256 (309)
                      |+.|+|||...   ..+.++||||||+++|+|++|+.||.+......  .+........   ....      ......  
T Consensus       182 t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (311)
T 3niz_A          182 TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVF  261 (311)
T ss_dssp             CCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCC
T ss_pred             cCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccc
Confidence            88999999643   347889999999999999999999976433222  1111111000   0000      000000  


Q ss_pred             CCCC-----HHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          257 GSYD-----SKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       257 ~~~~-----~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ....     .....++.+++.+||+.||++|||+.|+++
T Consensus       262 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          262 EKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             CCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             cCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            0000     011245667777999999999999999986

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=4.9e-40  Score=286.02  Aligned_cols=240  Identities=16%  Similarity=0.155  Sum_probs=189.5

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEeccc-cccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQAL-NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~-~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      .+.||+|+||.||+|... ++..+|+|.+... ....+.+.+|++++++++||||+++++++.+ ...++||||+++++|
T Consensus        14 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   93 (277)
T 3f3z_A           14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGEL   93 (277)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred             eeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcH
Confidence            368999999999999975 4678999988543 3456789999999999999999999998765 677899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceee---CCCCceeEeccccccccc------cc
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIML---DENFTAKLSDVGFFNSVR------NY  190 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill---~~~~~~kl~dfg~~~~~~------~~  190 (309)
                      .+++..  ...+++..+..++.+++.||.||   |+.+++|+||+|+||++   +.++.++|+|||++....      ..
T Consensus        94 ~~~~~~--~~~~~~~~~~~i~~~i~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~~  168 (277)
T 3f3z_A           94 FERVVH--KRVFRESDAARIMKDVLSAVAYC---HKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK  168 (277)
T ss_dssp             HHHHHH--HCSCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBCCC
T ss_pred             HHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchhcc
Confidence            998876  56799999999999999999999   77899999999999999   778899999999986432      34


Q ss_pred             CCCCCCCCCCCCCC-CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHH
Q 021659          191 ATMPHSSCPEDCST-QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLA  269 (309)
Q Consensus       191 ~~~~~~~~PE~~~~-~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~  269 (309)
                      .+++.|.|||...+ .+.++||||||+++++|++|+.||...................+.....        .....+.+
T Consensus       169 ~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~  240 (277)
T 3f3z_A          169 VGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWL--------NVSPQAES  240 (277)
T ss_dssp             CSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHT--------TSCHHHHH
T ss_pred             CCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhh--------cCCHHHHH
Confidence            67889999996443 5889999999999999999999998654332222111111100000000        01245667


Q ss_pred             HHHHccCCCCCCCCChHHHHH--HHhhh
Q 021659          270 VARLCIKTKDKPTISIPQISR--YLQNE  295 (309)
Q Consensus       270 l~~~cl~~dp~~Rps~~evl~--~L~~~  295 (309)
                      ++.+||+.||++|||+.++++  .+++.
T Consensus       241 li~~~l~~dp~~R~s~~~~l~h~~~~~~  268 (277)
T 3f3z_A          241 LIRRLLTKSPKQRITSLQALEHEWFEKQ  268 (277)
T ss_dssp             HHHHHTCSSTTTSCCHHHHTTSHHHHHH
T ss_pred             HHHHHccCChhhCcCHHHHhcCHHHhcc
Confidence            777999999999999999984  44443

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=6.4e-40  Score=287.29  Aligned_cols=233  Identities=18%  Similarity=0.227  Sum_probs=186.9

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC-----CeeEEEEeeC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG-----RKRLLVFDNI  114 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~-----~~~~lv~e~~  114 (309)
                      +.||+|+||.||+|.. .++..||+|.+.....   ..+.+.+|+.++++++||||+++++++..     ...++||||+
T Consensus        32 ~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~  111 (290)
T 1t4h_A           32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELM  111 (290)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECC
T ss_pred             eeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEec
Confidence            5799999999999997 4578899999864433   34568899999999999999999997642     3467999999


Q ss_pred             CCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCC--eeecccCCCceeeC-CCCceeEeccccccccc---
Q 021659          115 ENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLP--MYYVSISSSSIMLD-ENFTAKLSDVGFFNSVR---  188 (309)
Q Consensus       115 ~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~--i~H~dl~p~nill~-~~~~~kl~dfg~~~~~~---  188 (309)
                      ++++|.+++..  ...+++..++.++.+++.||.||   |+.+  ++||||||+||+++ .++.+||+|||++....   
T Consensus       112 ~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~l---H~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~  186 (290)
T 1t4h_A          112 TSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFL---HTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF  186 (290)
T ss_dssp             CSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHH---HTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTS
T ss_pred             CCCCHHHHHHH--ccCCCHHHHHHHHHHHHHHHHHH---HcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccc
Confidence            99999999976  46799999999999999999999   6667  99999999999998 78899999999986443   


Q ss_pred             --ccCCCCCCCCCCCCCC-CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHH
Q 021659          189 --NYATMPHSSCPEDCST-QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELK  265 (309)
Q Consensus       189 --~~~~~~~~~~PE~~~~-~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  265 (309)
                        ...+++.|+|||...+ .+.++||||||+++++|++|+.||.................. ....+.    . .   ..
T Consensus       187 ~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~----~-~---~~  257 (290)
T 1t4h_A          187 AKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK-PASFDK----V-A---IP  257 (290)
T ss_dssp             BEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC-CGGGGG----C-C---CH
T ss_pred             cccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCC-ccccCC----C-C---CH
Confidence              2457899999997543 478899999999999999999999876555544433322111 111111    1 1   23


Q ss_pred             HHHHHHHHccCCCCCCCCChHHHHH
Q 021659          266 KLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       266 ~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .+.+++.+||+.||++|||+.|+++
T Consensus       258 ~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          258 EVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhh
Confidence            4667777999999999999999986

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=5e-41  Score=293.13  Aligned_cols=239  Identities=17%  Similarity=0.243  Sum_probs=183.3

Q ss_pred             ccccccCCCceEEEEEEcC----CcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCC
Q 021659           43 HRIVYTNSHGAAYKARFQD----GEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIEN  116 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~----~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~  116 (309)
                      .+.||+|+||.||+|....    +..||+|.+....  ...+.+.+|+.++++++||||+++++++.+...++||||+++
T Consensus        20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~lv~e~~~~   99 (281)
T 1mp8_A           20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTL   99 (281)
T ss_dssp             EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEEEECCTT
T ss_pred             EeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccCccEEEEecCCC
Confidence            3689999999999999732    4579999885432  224578999999999999999999999887888999999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------  189 (309)
                      ++|.+++... ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++.....       
T Consensus       100 ~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  175 (281)
T 1mp8_A          100 GELRSFLQVR-KYSLDLASLILYAYQLSTALAYL---ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS  175 (281)
T ss_dssp             EEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEEETTEEEECC----------------
T ss_pred             CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHH---HhCCeecccccHHHEEECCCCCEEECccccccccCcccccccc
Confidence            9999999752 35699999999999999999999   778999999999999999999999999999865432       


Q ss_pred             -cCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccH--HHHHHHhcccccccccccCcCCCCCCHHH
Q 021659          190 -YATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDL--IQWIQESSISSSIHRMIDPDLGGSYDSKE  263 (309)
Q Consensus       190 -~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  263 (309)
                       ..+++.|+|||..  ...+.++||||||+++|+|++ |..||.+....  ...+...    .     ........    
T Consensus       176 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~----~-----~~~~~~~~----  242 (281)
T 1mp8_A          176 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG----E-----RLPMPPNC----  242 (281)
T ss_dssp             ---CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT----C-----CCCCCTTC----
T ss_pred             cCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcC----C-----CCCCCCCC----
Confidence             2345679999964  335778999999999999996 99999764322  1111111    0     01111111    


Q ss_pred             HHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcc
Q 021659          264 LKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDI  298 (309)
Q Consensus       264 ~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~  298 (309)
                      ...+.+++.+||..||++|||+.++++.|+++.+-
T Consensus       243 ~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  277 (281)
T 1mp8_A          243 PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  277 (281)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            24556677799999999999999999999987653

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=8.9e-42  Score=307.80  Aligned_cols=256  Identities=16%  Similarity=0.215  Sum_probs=195.7

Q ss_pred             ccCHHHHHHhhcccc--cccccCCCceEEEEEE------cCCcEEEEEEeccccc--cHHHHHHHHHHHccC-CCCCcce
Q 021659           29 RFSYKDIKMATDGFH--RIVYTNSHGAAYKARF------QDGEVALVKEIQALNL--EKDAFYREIQLLGRL-HHRHLLA   97 (309)
Q Consensus        29 ~~~~~~i~~~~~~~~--~~lg~G~~~~v~~~~~------~~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l-~h~niv~   97 (309)
                      .+.........+.|.  +.||+|+||.||+|++      .+++.||+|.+.....  ..+.+.+|+++++++ +||||++
T Consensus        11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~   90 (359)
T 3vhe_A           11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN   90 (359)
T ss_dssp             CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence            344455554555564  6899999999999984      2457899999964332  235789999999999 7899999


Q ss_pred             EeeeEeC--CeeEEEEeeCCCCCHHHhhcCCCC-----------------------------------------------
Q 021659           98 LQGFSTG--RKRLLVFDNIENGSLKEHLNDPLK-----------------------------------------------  128 (309)
Q Consensus        98 ~~~~~~~--~~~~lv~e~~~~~sL~~~i~~~~~-----------------------------------------------  128 (309)
                      +++++.+  ...++||||+++|+|.+++.....                                               
T Consensus        91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (359)
T 3vhe_A           91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE  170 (359)
T ss_dssp             EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred             eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence            9998764  347899999999999999976321                                               


Q ss_pred             -----------------CCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---
Q 021659          129 -----------------TPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---  188 (309)
Q Consensus       129 -----------------~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---  188 (309)
                                       ..+++..++.++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....   
T Consensus       171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~L---H~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~  247 (359)
T 3vhe_A          171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP  247 (359)
T ss_dssp             -------------CTTTTCBCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred             cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHH---HHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence                             1288999999999999999999   77899999999999999999999999999987442   


Q ss_pred             ------ccCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCC
Q 021659          189 ------NYATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSY  259 (309)
Q Consensus       189 ------~~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  259 (309)
                            ...+|+.|+|||..  ...+.++||||||+++|+|++ |..||.+.............. .     ........
T Consensus       248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-~-----~~~~~~~~  321 (359)
T 3vhe_A          248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-T-----RMRAPDYT  321 (359)
T ss_dssp             TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHT-C-----CCCCCTTC
T ss_pred             cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcC-C-----CCCCCCCC
Confidence                  22456679999964  335788999999999999998 999997654322221111111 0     01111111


Q ss_pred             CHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          260 DSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       260 ~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                          ...+.+++.+||+.||++|||+.|+++.|++++.
T Consensus       322 ----~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~  355 (359)
T 3vhe_A          322 ----TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  355 (359)
T ss_dssp             ----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ----CHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence                2345667779999999999999999999998764

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=2.7e-40  Score=300.80  Aligned_cols=231  Identities=17%  Similarity=0.231  Sum_probs=185.4

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccc----cccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQAL----NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~----~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||++... +++.||+|.+...    ....+.+.+|++++++++||||+++++++.+ ...|+||||+.+|
T Consensus        21 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg  100 (384)
T 4fr4_A           21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGG  100 (384)
T ss_dssp             EEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTE
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCC
Confidence            68999999999999974 5789999998532    2345678899999999999999999997765 6788999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------ccC
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------NYA  191 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------~~~  191 (309)
                      +|.+++..  ...+++..+..++.+++.||.||   |+.||+||||||+||+++.++.+||+|||++....      ...
T Consensus       101 ~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~L---H~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~  175 (384)
T 4fr4_A          101 DLRYHLQQ--NVHFKEETVKLFICELVMALDYL---QNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMA  175 (384)
T ss_dssp             EHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCCCC
T ss_pred             cHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCceeccCcHHHeEECCCCCEEEeccceeeeccCCCceeccC
Confidence            99999987  57799999999999999999999   77899999999999999999999999999987542      346


Q ss_pred             CCCCCCCCCCCC-----CCCCCCcEeehhhHHHHHHhCCCCCCCCc--cHHHHHHHhcccccccccccCcCCCCCCHHHH
Q 021659          192 TMPHSSCPEDCS-----TQDCSNIIFQLGVLILELVTGQSPEEGDV--DLIQWIQESSISSSIHRMIDPDLGGSYDSKEL  264 (309)
Q Consensus       192 ~~~~~~~PE~~~-----~~~~~~Dv~slG~~l~~l~tg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  264 (309)
                      +|+.|+|||...     .++.++|||||||++|+|++|+.||....  ............       ....+...    .
T Consensus       176 gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~-------~~~~p~~~----s  244 (384)
T 4fr4_A          176 GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETT-------VVTYPSAW----S  244 (384)
T ss_dssp             SCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHC-------CCCCCTTS----C
T ss_pred             CCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhc-------ccCCCCcC----C
Confidence            889999999753     25789999999999999999999997432  222222111100       01111111    2


Q ss_pred             HHHHHHHHHccCCCCCCCCC-hHHHHH
Q 021659          265 KKLLAVARLCIKTKDKPTIS-IPQISR  290 (309)
Q Consensus       265 ~~l~~l~~~cl~~dp~~Rps-~~evl~  290 (309)
                      ..+.+++.+||+.||++||+ +.++++
T Consensus       245 ~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          245 QEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             HHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence            45566677999999999998 666653

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=2.3e-40  Score=300.63  Aligned_cols=235  Identities=16%  Similarity=0.185  Sum_probs=181.1

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc-ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN-LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~-~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      +.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|++++++++||||+++++++.+ ...++||||+++++|.
T Consensus        95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~  174 (373)
T 2x4f_A           95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELF  174 (373)
T ss_dssp             EECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEH
T ss_pred             eEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHH
Confidence            4699999999999997 468899999986543 345678999999999999999999998765 6788999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceee--CCCCceeEeccccccccc------ccCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIML--DENFTAKLSDVGFFNSVR------NYAT  192 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill--~~~~~~kl~dfg~~~~~~------~~~~  192 (309)
                      +++... ...+++..+..++.|++.||.||   |+.+++||||||+||++  +.++.+||+|||++....      ...+
T Consensus       175 ~~l~~~-~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~g  250 (373)
T 2x4f_A          175 DRIIDE-SYNLTELDTILFMKQICEGIRHM---HQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFG  250 (373)
T ss_dssp             HHHHHT-GGGCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCCS
T ss_pred             HHHHhc-CCCCCHHHHHHHHHHHHHHHHHH---HHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccccC
Confidence            988642 35699999999999999999999   77899999999999999  567899999999987543      2358


Q ss_pred             CCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          193 MPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       193 ~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      |+.|+|||....  .+.++|||||||++|+|++|..||.+..................    +......    ...+.++
T Consensus       251 t~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~----~~~~~~l  322 (373)
T 2x4f_A          251 TPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLE----DEEFQDI----SEEAKEF  322 (373)
T ss_dssp             SCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSC----SGGGTTS----CHHHHHH
T ss_pred             CCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC----hhhhccC----CHHHHHH
Confidence            899999996533  46789999999999999999999987654332222111111100    0000111    2355666


Q ss_pred             HHHccCCCCCCCCChHHHHH
Q 021659          271 ARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       271 ~~~cl~~dp~~Rps~~evl~  290 (309)
                      +.+||+.||++|||+.|+++
T Consensus       323 i~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          323 ISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             HHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHcCCChhhCCCHHHHhc
Confidence            77999999999999999985

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=2.3e-41  Score=301.79  Aligned_cols=237  Identities=14%  Similarity=0.218  Sum_probs=184.7

Q ss_pred             cccccCCCceEEEEEEc-CCcE----EEEEEeccc--cccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEV----ALVKEIQAL--NLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~----va~K~~~~~--~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||+|.+. +++.    ||+|.+...  ....+.+.+|+.++++++||||+++++++.+...++|++|+++
T Consensus        21 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~  100 (327)
T 3poz_A           21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPF  100 (327)
T ss_dssp             EEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSSEEEEEECCTT
T ss_pred             eEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence            68999999999999963 3433    578877432  2345689999999999999999999999988778899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------  189 (309)
                      |+|.+++... ...+++..++.++.+++.||.||   |+.+++||||||+||+++.++.+||+|||++.....       
T Consensus       101 g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~  176 (327)
T 3poz_A          101 GCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA  176 (327)
T ss_dssp             CBHHHHHHHS-TTSCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC----
T ss_pred             CcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHH---hhCCeeCCCCChheEEECCCCCEEEccCcceeEccCCcccccc
Confidence            9999998753 36699999999999999999999   677999999999999999999999999999865432       


Q ss_pred             --cCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCcc--HHHHHHHhcccccccccccCcCCCCCCHH
Q 021659          190 --YATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVD--LIQWIQESSISSSIHRMIDPDLGGSYDSK  262 (309)
Q Consensus       190 --~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  262 (309)
                        ..++..|+|||..  ...+.++||||||+++|+|++ |+.||.+...  ....+....   .      ...    ...
T Consensus       177 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~---~------~~~----~~~  243 (327)
T 3poz_A          177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE---R------LPQ----PPI  243 (327)
T ss_dssp             ---CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC---C------CCC----CTT
T ss_pred             cCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCC---C------CCC----Ccc
Confidence              2345679999964  334788999999999999999 9999976432  111111110   0      001    111


Q ss_pred             HHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          263 ELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       263 ~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                      ....+.+++.+||+.||++|||+.++++.|+.+..
T Consensus       244 ~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~  278 (327)
T 3poz_A          244 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             BCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            23456677779999999999999999999987654

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=2.5e-40  Score=289.84  Aligned_cols=243  Identities=17%  Similarity=0.224  Sum_probs=185.6

Q ss_pred             ccccccCCCceEEEEEEcCCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCC
Q 021659           43 HRIVYTNSHGAAYKARFQDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGS  118 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~s  118 (309)
                      .+.||+|+||.||+|+..+++.||+|++.....   ..+.+.+|++++++++||||+++++++.+ ...++||||+++ +
T Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~   85 (288)
T 1ob3_A            7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-D   85 (288)
T ss_dssp             EEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-E
T ss_pred             hhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-C
Confidence            368999999999999997799999999854332   23678899999999999999999998765 678899999986 9


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccC
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYA  191 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~  191 (309)
                      |.+++... ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....       ...
T Consensus        86 l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  161 (288)
T 1ob3_A           86 LKKLLDVC-EGGLESVTAKSFLLQLLNGIAYC---HDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEI  161 (288)
T ss_dssp             HHHHHHTS-TTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------
T ss_pred             HHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEEcCCCCEEEeECccccccCcccccccccc
Confidence            99988753 36789999999999999999999   77899999999999999999999999999986432       235


Q ss_pred             CCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcc--cc---cccc-----cccCcCCC-
Q 021659          192 TMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSI--SS---SIHR-----MIDPDLGG-  257 (309)
Q Consensus       192 ~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~--~~---~~~~-----~~~~~l~~-  257 (309)
                      +|+.|+|||...   ..+.++||||||+++|+|++|+.||.+.............  ..   ..+.     ..++.... 
T Consensus       162 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (288)
T 1ob3_A          162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVY  241 (288)
T ss_dssp             CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCC
T ss_pred             ccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccc
Confidence            788999999643   3578899999999999999999999876543322221110  00   0000     00111100 


Q ss_pred             ------CCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          258 ------SYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       258 ------~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                            .........+.+++.+||+.||++|||+.|+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          242 EPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             CCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence                  000111345566777999999999999999985

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=3.4e-40  Score=300.72  Aligned_cols=236  Identities=17%  Similarity=0.221  Sum_probs=186.7

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc-ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN-LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~-~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      +.||+|+||.||+|... +++.||+|.+.... .+...+.+|++++++++||||+++++++.+ ...++||||+++++|.
T Consensus        57 ~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~  136 (387)
T 1kob_A           57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELF  136 (387)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHH
T ss_pred             EEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcHH
Confidence            58999999999999974 58899999985433 234578999999999999999999998765 6788999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC--CCceeEeccccccccc------ccCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE--NFTAKLSDVGFFNSVR------NYAT  192 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~--~~~~kl~dfg~~~~~~------~~~~  192 (309)
                      +++... ...+++..+..++.|++.||.||   |+.+++||||||+||+++.  ++.+||+|||++....      ...+
T Consensus       137 ~~l~~~-~~~l~~~~~~~i~~qi~~aL~~L---H~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~g  212 (387)
T 1kob_A          137 DRIAAE-DYKMSEAEVINYMRQACEGLKHM---HEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTA  212 (387)
T ss_dssp             HHTTCT-TCCBCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECS
T ss_pred             HHHHhh-cCCCCHHHHHHHHHHHHHHHHHH---HhCCeeecccchHHeEEecCCCCceEEEecccceecCCCcceeeecc
Confidence            999753 35799999999999999999999   7789999999999999974  4779999999987543      2368


Q ss_pred             CCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          193 MPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       193 ~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      |+.|+|||....  .+.++|||||||++|+|++|..||.+................    .++......    ...+.++
T Consensus       213 t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~----s~~~~~l  284 (387)
T 1kob_A          213 TAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWE----FDEDAFSSV----SPEAKDF  284 (387)
T ss_dssp             SGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCC----CCSSTTTTS----CHHHHHH
T ss_pred             CCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC----CCccccccC----CHHHHHH
Confidence            899999997543  477899999999999999999999876443222111111100    111111111    2345567


Q ss_pred             HHHccCCCCCCCCChHHHHHH
Q 021659          271 ARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       271 ~~~cl~~dp~~Rps~~evl~~  291 (309)
                      +.+||..||++|||+.|+++.
T Consensus       285 i~~~L~~dP~~Rpt~~ell~h  305 (387)
T 1kob_A          285 IKNLLQKEPRKRLTVHDALEH  305 (387)
T ss_dssp             HHTTSCSSGGGSCCHHHHHTS
T ss_pred             HHHHcCCChhHCcCHHHHhhC
Confidence            779999999999999999863

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.6e-41  Score=303.19  Aligned_cols=246  Identities=16%  Similarity=0.228  Sum_probs=187.2

Q ss_pred             cccccCCCceEEEEEE------cCCcEEEEEEeccc--cccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEee
Q 021659           44 RIVYTNSHGAAYKARF------QDGEVALVKEIQAL--NLEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~------~~~~~va~K~~~~~--~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      +.||+|+||.||+|..      .++..||+|.+...  ....+.+.+|+.+++++ +||||+++++++.. ...++||||
T Consensus        51 ~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~  130 (344)
T 1rjb_A           51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEY  130 (344)
T ss_dssp             EEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             eeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEec
Confidence            6899999999999996      24568999998543  22346789999999999 89999999998765 678899999


Q ss_pred             CCCCCHHHhhcCCCC---------------------CCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC
Q 021659          114 IENGSLKEHLNDPLK---------------------TPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE  172 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~---------------------~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~  172 (309)
                      +++|+|.+++.....                     ..+++..++.++.|++.||.||   |+.+++||||||+||+++.
T Consensus       131 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dikp~NIll~~  207 (344)
T 1rjb_A          131 CCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFL---EFKSCVHRDLAARNVLVTH  207 (344)
T ss_dssp             CTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHH---HHTTEEETTCSGGGEEEET
T ss_pred             CCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCChhhEEEcC
Confidence            999999999976322                     3489999999999999999999   7789999999999999999


Q ss_pred             CCceeEecccccccccc---------cCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHH
Q 021659          173 NFTAKLSDVGFFNSVRN---------YATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQE  240 (309)
Q Consensus       173 ~~~~kl~dfg~~~~~~~---------~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~  240 (309)
                      ++.+||+|||++.....         ..+++.|+|||..  ...++++||||||+++++|+| |..||.+..........
T Consensus       208 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~  287 (344)
T 1rjb_A          208 GKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKL  287 (344)
T ss_dssp             TTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHH
T ss_pred             CCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHH
Confidence            99999999999864422         2345679999964  335788999999999999998 99999765432221111


Q ss_pred             hcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcccccc
Q 021659          241 SSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCYK  302 (309)
Q Consensus       241 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~~~  302 (309)
                      ... ..     .+..... .   ...+.+++.+||..||++|||+.++++.|+..+......
T Consensus       288 ~~~-~~-----~~~~~~~-~---~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~  339 (344)
T 1rjb_A          288 IQN-GF-----KMDQPFY-A---TEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEA  339 (344)
T ss_dssp             HHT-TC-----CCCCCTT-C---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC------
T ss_pred             Hhc-CC-----CCCCCCC-C---CHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHHH
Confidence            111 10     1111111 1   245666777999999999999999999999887765443

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=2.4e-41  Score=307.50  Aligned_cols=239  Identities=18%  Similarity=0.235  Sum_probs=188.3

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      +.||+|+||.||+|.+. +++.||+|.+.....  ..+.+.+|++++++++||||+++++++.+ ...++||||+++|+|
T Consensus       120 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L  199 (377)
T 3cbl_A          120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF  199 (377)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred             eEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCCH
Confidence            58999999999999985 688999999864322  23468899999999999999999998865 677899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccccc---------
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNY---------  190 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~---------  190 (309)
                      .+++... ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++......         
T Consensus       200 ~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~  275 (377)
T 3cbl_A          200 LTFLRTE-GARLRVKTLLQMVGDAAAGMEYL---ESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLR  275 (377)
T ss_dssp             HHHHHHH-GGGCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSCC
T ss_pred             HHHHHhc-CCCCCHHHHHHHHHHHHHHHHHH---HHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCCC
Confidence            9998742 34689999999999999999999   7789999999999999999999999999998643221         


Q ss_pred             CCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          191 ATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       191 ~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      .++..|+|||...  ..+.++||||||+++|||++ |..||.+....... ..... +.     ....+...    ...+
T Consensus       276 ~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~-~~~~~-~~-----~~~~~~~~----~~~l  344 (377)
T 3cbl_A          276 QVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTR-EFVEK-GG-----RLPCPELC----PDAV  344 (377)
T ss_dssp             EEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHH-HHHHT-TC-----CCCCCTTC----CHHH
T ss_pred             CCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH-HHHHc-CC-----CCCCCCCC----CHHH
Confidence            1245699999643  34778999999999999998 99999865432211 11111 10     01111111    2345


Q ss_pred             HHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          268 LAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                      .+++.+||+.||++|||+.++++.|+++.+
T Consensus       345 ~~li~~cl~~dP~~Rps~~~i~~~L~~i~~  374 (377)
T 3cbl_A          345 FRLMEQCWAYEPGQRPSFSTIYQELQSIRK  374 (377)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence            567779999999999999999999987653

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=5.8e-40  Score=290.44  Aligned_cols=245  Identities=17%  Similarity=0.193  Sum_probs=187.4

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccccc----HHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLE----KDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~----~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||++... +++.||+|++......    .+.+.+|+.++++++||||+++++++. +...++|+||++++
T Consensus        40 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~  119 (309)
T 2h34_A           40 RLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGV  119 (309)
T ss_dssp             EEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCCE
T ss_pred             EEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCCC
Confidence            58999999999999974 6889999998643322    357889999999999999999999775 47788999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc--------c
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR--------N  189 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~--------~  189 (309)
                      +|.+++..  ...+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++.+||+|||++....        .
T Consensus       120 ~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  194 (309)
T 2h34_A          120 DLAAMLRR--QGPLAPPRAVAIVRQIGSALDAA---HAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGN  194 (309)
T ss_dssp             EHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTSCEEECSCCC--------------
T ss_pred             CHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccccccccc
Confidence            99999976  46799999999999999999999   77899999999999999999999999999876442        2


Q ss_pred             cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          190 YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ..+++.|.|||....  .+.++||||||+++|+|++|+.||....... ................+.+        ...+
T Consensus       195 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~--------~~~l  265 (309)
T 2h34_A          195 TVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSV-MGAHINQAIPRPSTVRPGI--------PVAF  265 (309)
T ss_dssp             --CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHH-HHHHHHSCCCCGGGTSTTC--------CTHH
T ss_pred             cCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHH-HHHHhccCCCCccccCCCC--------CHHH
Confidence            357788999997544  4789999999999999999999998654321 1111111111111111111        2345


Q ss_pred             HHHHHHccCCCCCCCC-ChHHHHHHHhhhhcccccc
Q 021659          268 LAVARLCIKTKDKPTI-SIPQISRYLQNEVDIQCYK  302 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rp-s~~evl~~L~~~~~~~~~~  302 (309)
                      .+++.+||..||++|| ++.++++.|++.+......
T Consensus       266 ~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~~  301 (309)
T 2h34_A          266 DAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQD  301 (309)
T ss_dssp             HHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-----
T ss_pred             HHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhccc
Confidence            5666799999999999 9999999999887765443

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=2.7e-40  Score=290.06  Aligned_cols=242  Identities=16%  Similarity=0.162  Sum_probs=181.2

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccccc---HHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLE---KDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~s  118 (309)
                      +.||+|+||.||+|... +++.||+|++......   .+.+.+|+.++++++||||+++++++.+ ...++||||+++ +
T Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~   86 (292)
T 3o0g_A            8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-D   86 (292)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-E
T ss_pred             eEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-C
Confidence            68999999999999974 5889999999543322   3678899999999999999999997754 778899999987 5


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccC
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYA  191 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~  191 (309)
                      +.+.+... ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....       ...
T Consensus        87 l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~l---H~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  162 (292)
T 3o0g_A           87 LKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFC---HSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEV  162 (292)
T ss_dssp             HHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCSCC
T ss_pred             HHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccccccCCc
Confidence            55554332 46799999999999999999999   77799999999999999999999999999986543       235


Q ss_pred             CCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcc---c---ccccccc---c-------
Q 021659          192 TMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSI---S---SSIHRMI---D-------  252 (309)
Q Consensus       192 ~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~---~---~~~~~~~---~-------  252 (309)
                      +|+.|+|||...+   .+.++||||||+++++|++|..||...............   .   .......   +       
T Consensus       163 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (292)
T 3o0g_A          163 VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMY  242 (292)
T ss_dssp             SCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCC
T ss_pred             cccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccc
Confidence            6788999996432   478899999999999999988886444333322221110   0   0000000   0       


Q ss_pred             --CcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          253 --PDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       253 --~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                        ..............+.+++.+||+.||++|||+.|+++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          243 PATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             CTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence              00000011112345556777999999999999999986

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=6e-41  Score=299.40  Aligned_cols=243  Identities=12%  Similarity=0.110  Sum_probs=189.2

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      +.||+|+||.||+|.. .+++.||+|.+.... ..+.+.+|+++++++ +||||+++++++.. ...++||||+ +++|.
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~   92 (330)
T 2izr_A           15 KKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSLE   92 (330)
T ss_dssp             EECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBHH
T ss_pred             EEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCHH
Confidence            6899999999999996 568999999986433 234688999999999 89999999997754 6778999999 88999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCc-----eeEeccccccccc-------
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFT-----AKLSDVGFFNSVR-------  188 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~-----~kl~dfg~~~~~~-------  188 (309)
                      +++... ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.     +||+|||++....       
T Consensus        93 ~~~~~~-~~~~~~~~~~~i~~qi~~~l~~L---H~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~  168 (330)
T 2izr_A           93 DLFDLC-DRTFSLKTVLMIAIQLISRMEYV---HSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKH  168 (330)
T ss_dssp             HHHHHT-TTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCB
T ss_pred             HHHHHc-CCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCcc
Confidence            999753 46799999999999999999999   7779999999999999998887     9999999987432       


Q ss_pred             -------ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCc--cHHHHHHHhcccccccccccCcCCC
Q 021659          189 -------NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDV--DLIQWIQESSISSSIHRMIDPDLGG  257 (309)
Q Consensus       189 -------~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~  257 (309)
                             ...+|+.|+|||...+  .+.++||||||+++|+|++|+.||.+..  ..............  ......+. 
T Consensus       169 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~--~~~~~~~~-  245 (330)
T 2izr_A          169 IPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKR--ATPIEVLC-  245 (330)
T ss_dssp             CCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHH--HSCHHHHT-
T ss_pred             ccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhc--cCCHHHHh-
Confidence                   3457899999997544  4778999999999999999999997632  22222211100000  00000001 


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccc
Q 021659          258 SYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQ  299 (309)
Q Consensus       258 ~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~  299 (309)
                      ...+    .+.+++.+||..||.+||++.+|.+.|++..+-.
T Consensus       246 ~~~p----~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~  283 (330)
T 2izr_A          246 ENFP----EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK  283 (330)
T ss_dssp             TTCH----HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             ccCh----HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence            1111    5666677999999999999999999998776544

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=2.6e-40  Score=308.59  Aligned_cols=234  Identities=17%  Similarity=0.234  Sum_probs=189.0

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||+|+.. +|+.||+|++....    ...+.+.+|+.+++.++||||+++++++.. ...++||||++++
T Consensus        22 ~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg  101 (476)
T 2y94_A           22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGG  101 (476)
T ss_dssp             EEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSSE
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCC
Confidence            68999999999999974 68999999985432    234678999999999999999999998765 6788999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------ccC
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------NYA  191 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------~~~  191 (309)
                      +|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....      ...
T Consensus       102 ~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~L---H~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~  176 (476)
T 2y94_A          102 ELFDYICK--NGRLDEKESRRLFQQILSGVDYC---HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC  176 (476)
T ss_dssp             EHHHHTTS--SSSCCHHHHHHHHHHHHHHHHHH---HTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBCCCC
T ss_pred             cHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCCCcccccHHHEEEecCCCeEEEeccchhhccccccccccC
Confidence            99999976  56799999999999999999999   78899999999999999999999999999987543      346


Q ss_pred             CCCCCCCCCCCCCC---CCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHH
Q 021659          192 TMPHSSCPEDCSTQ---DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL  268 (309)
Q Consensus       192 ~~~~~~~PE~~~~~---~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~  268 (309)
                      +++.|+|||...+.   +.++||||||+++|+|++|+.||.+...... ...... +.      ...+...    ...+.
T Consensus       177 gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~-~~~i~~-~~------~~~p~~~----s~~~~  244 (476)
T 2y94_A          177 GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTL-FKKICD-GI------FYTPQYL----NPSVI  244 (476)
T ss_dssp             SCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHH-HHHHHT-TC------CCCCTTC----CHHHH
T ss_pred             CCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHH-HHHHhc-CC------cCCCccC----CHHHH
Confidence            88999999975443   5689999999999999999999986543222 111111 10      0011111    23455


Q ss_pred             HHHHHccCCCCCCCCChHHHHH--HHhh
Q 021659          269 AVARLCIKTKDKPTISIPQISR--YLQN  294 (309)
Q Consensus       269 ~l~~~cl~~dp~~Rps~~evl~--~L~~  294 (309)
                      +++.+||+.||++|||+.|+++  .+.+
T Consensus       245 ~Li~~~L~~dP~~Rpt~~eil~hp~~~~  272 (476)
T 2y94_A          245 SLLKHMLQVDPMKRATIKDIREHEWFKQ  272 (476)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHTCHHHHT
T ss_pred             HHHHHHcCCCchhCcCHHHHHhCHHhhh
Confidence            6666999999999999999995  4443

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=6.4e-40  Score=291.65  Aligned_cols=236  Identities=18%  Similarity=0.248  Sum_probs=187.8

Q ss_pred             cccccccCCCceEEEEEEc-CCcEEEEEEeccccc-------cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEe
Q 021659           42 FHRIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL-------EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFD  112 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~-------~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e  112 (309)
                      +.+.||+|+||.||++... +++.||+|.+.....       ..+.+.+|+.++++++||||+++++++.+ ...++|||
T Consensus        16 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   95 (321)
T 2a2a_A           16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILE   95 (321)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             EeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEE
Confidence            3478999999999999974 588999999854322       35679999999999999999999998765 67889999


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCC----ceeEeccccccccc
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENF----TAKLSDVGFFNSVR  188 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~----~~kl~dfg~~~~~~  188 (309)
                      |+++++|.+++..  ...+++..+..++.|++.||.||   |+.+++||||+|+||+++.++    .+||+|||++....
T Consensus        96 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~l---H~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~  170 (321)
T 2a2a_A           96 LVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYL---HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE  170 (321)
T ss_dssp             CCCSCBHHHHHHT--CSCEEHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECC
T ss_pred             cCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecC
Confidence            9999999999986  56799999999999999999999   778999999999999999887    79999999986543


Q ss_pred             ------ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCC
Q 021659          189 ------NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYD  260 (309)
Q Consensus       189 ------~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  260 (309)
                            ...+++.|+|||...  ..+.++||||||+++|+|++|..||.+..................    +...... 
T Consensus       171 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~-  245 (321)
T 2a2a_A          171 DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFD----EEFFSHT-  245 (321)
T ss_dssp             TTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCC----HHHHTTC-
T ss_pred             ccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccC----hhhhccc-
Confidence                  335788999999643  347889999999999999999999976543322221111111100    0000111 


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          261 SKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       261 ~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                         ...+.+++.+||..||++|||+.|+++
T Consensus       246 ---~~~~~~li~~~l~~dp~~Rps~~e~l~  272 (321)
T 2a2a_A          246 ---SELAKDFIRKLLVKETRKRLTIQEALR  272 (321)
T ss_dssp             ---CHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred             ---CHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence               234566777999999999999999986

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2.2e-40  Score=296.50  Aligned_cols=228  Identities=18%  Similarity=0.238  Sum_probs=183.2

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccc----cccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQAL----NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~----~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||+|.. .+++.||+|++...    ....+.+.+|+.+++.++||||+++++++.. ...++||||+ +|
T Consensus        15 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~g   93 (336)
T 3h4j_B           15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GG   93 (336)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-CE
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-CC
Confidence            6899999999999997 56889999998532    2224578999999999999999999998765 6788999999 67


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------ccC
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------NYA  191 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------~~~  191 (309)
                      +|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....      ...
T Consensus        94 ~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~~L---H~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~~~  168 (336)
T 3h4j_B           94 ELFDYIVE--KKRMTEDEGRRFFQQIICAIEYC---HRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC  168 (336)
T ss_dssp             EHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHH---HHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCCCT
T ss_pred             cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCccccccc
Confidence            99998865  46799999999999999999999   67799999999999999999999999999986542      346


Q ss_pred             CCCCCCCCCCCCCC---CCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccC--cCCCCCCHHHHHH
Q 021659          192 TMPHSSCPEDCSTQ---DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDP--DLGGSYDSKELKK  266 (309)
Q Consensus       192 ~~~~~~~PE~~~~~---~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~~  266 (309)
                      +|+.|+|||...+.   ++++||||||+++|+|++|+.||.+...          ......+...  ..+. ..   ...
T Consensus       169 gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~----------~~~~~~i~~~~~~~p~-~~---s~~  234 (336)
T 3h4j_B          169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFI----------PNLFKKVNSCVYVMPD-FL---SPG  234 (336)
T ss_dssp             TSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSS----------TTCBCCCCSSCCCCCT-TS---CHH
T ss_pred             CCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccH----------HHHHHHHHcCCCCCcc-cC---CHH
Confidence            88999999976543   5689999999999999999999975421          0011111111  1111 11   234


Q ss_pred             HHHHHHHccCCCCCCCCChHHHHHH
Q 021659          267 LLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      +.+++.+||..||++|||+.|+++.
T Consensus       235 ~~~li~~~L~~dP~~Rpt~~eil~h  259 (336)
T 3h4j_B          235 AQSLIRRMIVADPMQRITIQEIRRD  259 (336)
T ss_dssp             HHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred             HHHHHHHHcCCChhHCcCHHHHHhC
Confidence            5566669999999999999999853

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=1.3e-40  Score=292.03  Aligned_cols=242  Identities=17%  Similarity=0.206  Sum_probs=191.6

Q ss_pred             ccccCCCceEEEEEE---cCCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCCCC
Q 021659           45 IVYTNSHGAAYKARF---QDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGS  118 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~---~~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~~s  118 (309)
                      .||+|+||.||+|.+   .+++.||+|.+.....   ..+.+.+|++++++++||||+++++++.....++||||+++++
T Consensus        24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~  103 (291)
T 1xbb_A           24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGP  103 (291)
T ss_dssp             EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEEEECCTTEE
T ss_pred             ccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECCCCcEEEEEeCCCCC
Confidence            899999999999965   3467899999864332   2467899999999999999999999998788899999999999


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc---------
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN---------  189 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~---------  189 (309)
                      |.+++..  ...+++..++.++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++.....         
T Consensus       104 L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~L---H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  178 (291)
T 1xbb_A          104 LNKYLQQ--NRHVKDKNIIELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT  178 (291)
T ss_dssp             HHHHHHH--CTTCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC--
T ss_pred             HHHHHHh--CcCCCHHHHHHHHHHHHHHHHHH---HhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccc
Confidence            9999986  56799999999999999999999   777999999999999999999999999999865432         


Q ss_pred             -cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHH
Q 021659          190 -YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELK  265 (309)
Q Consensus       190 -~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  265 (309)
                       ..++..|.|||....  .+.++||||||+++++|++ |+.||........ ..... ...     .+......    ..
T Consensus       179 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-~~~~~-~~~-----~~~~~~~~----~~  247 (291)
T 1xbb_A          179 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLE-KGE-----RMGCPAGC----PR  247 (291)
T ss_dssp             --CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH-HHHHH-TTC-----CCCCCTTC----CH
T ss_pred             cCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHH-HHHHH-cCC-----CCCCCCCC----CH
Confidence             123467999997533  3678999999999999999 9999986543221 11111 111     11111111    24


Q ss_pred             HHHHHHHHccCCCCCCCCChHHHHHHHhhhhcccccc
Q 021659          266 KLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCYK  302 (309)
Q Consensus       266 ~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~~~  302 (309)
                      .+.+++.+||..||++|||+.++++.|+++....+.+
T Consensus       248 ~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~  284 (291)
T 1xbb_A          248 EMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNE  284 (291)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhhc
Confidence            5667777999999999999999999999887665543

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=1.5e-40  Score=299.21  Aligned_cols=235  Identities=15%  Similarity=0.168  Sum_probs=175.2

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHHH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLKE  121 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~~  121 (309)
                      +.||+|+||.||+|+.. +++.||+|++.... ..+.+.+|++++++++||||+++++++.+ ...++||||+++++|.+
T Consensus        59 ~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~  137 (349)
T 2w4o_A           59 SELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFD  137 (349)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHH
T ss_pred             eEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHHH
Confidence            58999999999999985 57889999986443 45678899999999999999999998765 67889999999999999


Q ss_pred             hhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC---CCceeEeccccccccc------ccCC
Q 021659          122 HLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE---NFTAKLSDVGFFNSVR------NYAT  192 (309)
Q Consensus       122 ~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~---~~~~kl~dfg~~~~~~------~~~~  192 (309)
                      ++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.   ++.+||+|||++....      ...+
T Consensus       138 ~l~~--~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~g  212 (349)
T 2w4o_A          138 RIVE--KGYYSERDAADAVKQILEAVAYL---HENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCG  212 (349)
T ss_dssp             HHTT--CSSCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEESSSSTTCCEEECCCC----------------
T ss_pred             HHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcccccccccC
Confidence            9976  56799999999999999999999   7779999999999999975   7899999999987543      3357


Q ss_pred             CCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          193 MPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       193 ~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      ++.|+|||...+  .+.++|||||||++|+|++|..||..................  ....+     ........+.++
T Consensus       213 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~--~~~~~-----~~~~~~~~~~~l  285 (349)
T 2w4o_A          213 TPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEY--YFISP-----WWDEVSLNAKDL  285 (349)
T ss_dssp             CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCC--CCCTT-----TTTTSCHHHHHH
T ss_pred             CCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCC--ccCCc-----hhhhCCHHHHHH
Confidence            889999997543  478899999999999999999999765443322222111110  00111     111113455667


Q ss_pred             HHHccCCCCCCCCChHHHHHH
Q 021659          271 ARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       271 ~~~cl~~dp~~Rps~~evl~~  291 (309)
                      +.+||..||++|||+.|+++.
T Consensus       286 i~~~L~~dP~~Rpt~~e~l~h  306 (349)
T 2w4o_A          286 VRKLIVLDPKKRLTTFQALQH  306 (349)
T ss_dssp             HHTTSCSSGGGSCCHHHHHHS
T ss_pred             HHHHccCChhhCcCHHHHhcC
Confidence            779999999999999999863

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=1.7e-40  Score=291.65  Aligned_cols=253  Identities=13%  Similarity=0.099  Sum_probs=194.1

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      +.||+|+||.||+|.. .+++.||+|.+.... ..+.+.+|+..++++ +|+|++++++++.+ ...++||||+ +++|.
T Consensus        16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~   93 (298)
T 1csn_A           16 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLE   93 (298)
T ss_dssp             EEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHH
T ss_pred             EEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCHH
Confidence            6899999999999996 568999999885433 344688999999999 79999999998764 6778999999 88999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCc-----eeEeccccccccc-------
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFT-----AKLSDVGFFNSVR-------  188 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~-----~kl~dfg~~~~~~-------  188 (309)
                      +++... ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.     +||+|||++....       
T Consensus        94 ~~l~~~-~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~  169 (298)
T 1csn_A           94 DLLDLC-GRKFSVKTVAMAAKQMLARVQSI---HEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQH  169 (298)
T ss_dssp             HHHHHT-TTCCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCB
T ss_pred             HHHHHh-ccCCCHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccccccc
Confidence            999753 34699999999999999999999   7889999999999999987765     9999999986432       


Q ss_pred             -------ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCc--cHHHHHHHhcccccccccccCcCCC
Q 021659          189 -------NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDV--DLIQWIQESSISSSIHRMIDPDLGG  257 (309)
Q Consensus       189 -------~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~  257 (309)
                             ...+|+.|+|||...+  .++++||||||+++|+|++|+.||.+..  ................  ..+.+..
T Consensus       170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  247 (298)
T 1csn_A          170 IPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST--PLRELCA  247 (298)
T ss_dssp             CCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS--CHHHHTT
T ss_pred             ccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCc--cHHHHHh
Confidence                   2357889999997543  4788999999999999999999997632  1111111111000000  0001111


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcccccc-cccccc
Q 021659          258 SYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCYK-YSRVSF  308 (309)
Q Consensus       258 ~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~~~-~~~~~~  308 (309)
                      ..    ...+.+++.+||..||++|||+.+|++.|+++..-...+ ..+.||
T Consensus       248 ~~----~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw  295 (298)
T 1csn_A          248 GF----PEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDW  295 (298)
T ss_dssp             TS----CHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCSCSCCGG
T ss_pred             hC----cHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCCCCCcccc
Confidence            11    245667777999999999999999999999887654433 444555

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=1.3e-40  Score=298.29  Aligned_cols=243  Identities=23%  Similarity=0.282  Sum_probs=190.2

Q ss_pred             cccccCCCceEEEEEEc------CCcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeC
Q 021659           44 RIVYTNSHGAAYKARFQ------DGEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNI  114 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~------~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~  114 (309)
                      +.||+|+||.||+|+..      +++.||+|.+.....  ..+.+.+|+.++++++||||+++++++.+ ...++||||+
T Consensus        53 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~  132 (343)
T 1luf_A           53 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYM  132 (343)
T ss_dssp             EEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             eeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEecC
Confidence            58999999999999974      347899999864332  24578999999999999999999998765 6788999999


Q ss_pred             CCCCHHHhhcCCC----------------------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC
Q 021659          115 ENGSLKEHLNDPL----------------------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE  172 (309)
Q Consensus       115 ~~~sL~~~i~~~~----------------------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~  172 (309)
                      ++++|.+++....                      ...+++..++.++.|++.||.||   |+.+++||||||+||+++.
T Consensus       133 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~L---H~~~ivH~Dlkp~NIl~~~  209 (343)
T 1luf_A          133 AYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGE  209 (343)
T ss_dssp             TTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECG
T ss_pred             CCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCcceEEECC
Confidence            9999999986521                      26799999999999999999999   7779999999999999999


Q ss_pred             CCceeEeccccccccc---------ccCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHH
Q 021659          173 NFTAKLSDVGFFNSVR---------NYATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQE  240 (309)
Q Consensus       173 ~~~~kl~dfg~~~~~~---------~~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~  240 (309)
                      ++.+||+|||++....         ...+++.|+|||..  ...+.++||||||+++|+|++ |..||.+..... ....
T Consensus       210 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~~~  288 (343)
T 1luf_A          210 NMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE-VIYY  288 (343)
T ss_dssp             GGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH-HHHH
T ss_pred             CCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHH-HHHH
Confidence            9999999999986432         23456779999964  345788999999999999999 999997654321 1111


Q ss_pred             hcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcccc
Q 021659          241 SSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQC  300 (309)
Q Consensus       241 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~  300 (309)
                      . ..+..     +......    ...+.+++.+||..||++|||+.++++.|+++.+...
T Consensus       289 ~-~~~~~-----~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~  338 (343)
T 1luf_A          289 V-RDGNI-----LACPENC----PLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE  338 (343)
T ss_dssp             H-HTTCC-----CCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred             H-hCCCc-----CCCCCCC----CHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence            1 11111     1111111    2356667779999999999999999999998876543

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=4.5e-41  Score=303.04  Aligned_cols=230  Identities=18%  Similarity=0.217  Sum_probs=183.0

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccc----cccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQAL----NLEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~----~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||+|+.. +++.||+|++...    ....+.+..|..+++.+ +||||+++++++.+ ...|+||||+++
T Consensus        29 ~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~g  108 (353)
T 3txo_A           29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNG  108 (353)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred             EEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCCC
Confidence            68999999999999974 5899999998643    22345678999999988 69999999997765 678899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------c
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------N  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~  189 (309)
                      |+|.+++..  ...+++..+..++.+++.||.||   |+.+|+||||||+||+++.++.+||+|||+++...       .
T Consensus       109 g~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~L---H~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~  183 (353)
T 3txo_A          109 GDLMFHIQK--SRRFDEARARFYAAEIISALMFL---HDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTAT  183 (353)
T ss_dssp             CBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-------
T ss_pred             CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCCcccCCCHHHEEECCCCCEEEccccceeecccCCccccc
Confidence            999999976  56799999999999999999999   77899999999999999999999999999987432       3


Q ss_pred             cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          190 YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       190 ~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ..+|+.|+|||...  .++.++|+|||||++|+|++|+.||.+..............        ...+.. .   ...+
T Consensus       184 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~--------~~~p~~-~---~~~~  251 (353)
T 3txo_A          184 FCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDE--------VVYPTW-L---HEDA  251 (353)
T ss_dssp             --CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--------CCCCTT-S---CHHH
T ss_pred             cCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCC--------CCCCCC-C---CHHH
Confidence            46889999999643  35789999999999999999999998654332221111111        111111 1   2345


Q ss_pred             HHHHHHccCCCCCCCCCh------HHHHH
Q 021659          268 LAVARLCIKTKDKPTISI------PQISR  290 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~------~evl~  290 (309)
                      .+++.+||..||++||++      .|+++
T Consensus       252 ~~li~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          252 TGILKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             HHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             HHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence            566669999999999998      66663

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=3.5e-41  Score=304.21  Aligned_cols=259  Identities=16%  Similarity=0.189  Sum_probs=194.6

Q ss_pred             cccCHHHHHHhhcccc--cccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccCC-----CCCcceEe
Q 021659           28 RRFSYKDIKMATDGFH--RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRLH-----HRHLLALQ   99 (309)
Q Consensus        28 ~~~~~~~i~~~~~~~~--~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~-----h~niv~~~   99 (309)
                      ..|++.+-....++|.  +.||+|+||.||+|+. .+++.||+|++.......+.+..|+++++.++     ||||++++
T Consensus        23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~  102 (360)
T 3llt_A           23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYH  102 (360)
T ss_dssp             GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEE
T ss_pred             eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeeccc
Confidence            3344444444445565  6899999999999997 46889999999765555667888999999886     99999999


Q ss_pred             eeEe-CCeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC------
Q 021659          100 GFST-GRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE------  172 (309)
Q Consensus       100 ~~~~-~~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~------  172 (309)
                      +++. ....++||||+ +++|.+++.......+++..+..++.|++.||.||   |+.+++||||||+||+++.      
T Consensus       103 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~~~~~~  178 (360)
T 3llt_A          103 GKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYL---RKMSLTHTDLKPENILLDDPYFEKS  178 (360)
T ss_dssp             EEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEESCTTCCEE
T ss_pred             ceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCCcccEEEcccccccc
Confidence            9765 47888999999 88999999865556799999999999999999999   7789999999999999975      


Q ss_pred             -------------------CCceeEeccccccccc----ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCC
Q 021659          173 -------------------NFTAKLSDVGFFNSVR----NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSP  227 (309)
Q Consensus       173 -------------------~~~~kl~dfg~~~~~~----~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p  227 (309)
                                         ++.+||+|||++....    ...+|+.|+|||...  ..+.++|||||||++|+|++|+.|
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~p  258 (360)
T 3llt_A          179 LITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLL  258 (360)
T ss_dssp             EEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             ccchhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCC
Confidence                               7889999999987543    346788999999643  357899999999999999999999


Q ss_pred             CCCCccHHHHHHHhccccccc-------------ccccC-----cCCC-CCCHHH---------------HHHHHHHHHH
Q 021659          228 EEGDVDLIQWIQESSISSSIH-------------RMIDP-----DLGG-SYDSKE---------------LKKLLAVARL  273 (309)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~-------------~~~~~-----~l~~-~~~~~~---------------~~~l~~l~~~  273 (309)
                      |...................+             ...+.     ..+. ......               ...+.+++.+
T Consensus       259 f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  338 (360)
T 3llt_A          259 FRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYS  338 (360)
T ss_dssp             CCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHH
T ss_pred             CCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHH
Confidence            986543322211111000000             00000     0000 001110               1456678889


Q ss_pred             ccCCCCCCCCChHHHHH
Q 021659          274 CIKTKDKPTISIPQISR  290 (309)
Q Consensus       274 cl~~dp~~Rps~~evl~  290 (309)
                      ||+.||++|||+.|+++
T Consensus       339 ~L~~dP~~Rpta~elL~  355 (360)
T 3llt_A          339 ILQIDPTLRPSPAELLK  355 (360)
T ss_dssp             HCCSSGGGSCCHHHHTT
T ss_pred             HhcCChhhCCCHHHHhc
Confidence            99999999999999975

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=3e-40  Score=292.11  Aligned_cols=249  Identities=18%  Similarity=0.253  Sum_probs=184.6

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||+|.. .++..||+|.+....    ...+.+.+|+.++++++||||+++++++. +...++||||++++
T Consensus        38 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  117 (310)
T 2wqm_A           38 KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAG  117 (310)
T ss_dssp             EEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCSC
T ss_pred             EeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCCC
Confidence            6899999999999997 568899999986422    22457889999999999999999999765 47788999999999


Q ss_pred             CHHHhhcC--CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------
Q 021659          118 SLKEHLND--PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------  188 (309)
Q Consensus       118 sL~~~i~~--~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------  188 (309)
                      +|.+++..  .....+++..++.++.+++.||.||   |+.+++||||+|+||+++.++.+||+|||++....       
T Consensus       118 ~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~  194 (310)
T 2wqm_A          118 DLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM---HSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAH  194 (310)
T ss_dssp             BHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEECCC--------------
T ss_pred             CHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHH---hhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCcccc
Confidence            99998863  1246799999999999999999999   77899999999999999999999999999986443       


Q ss_pred             ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCc-cHHHHHHHhcccccccccccCcCCCCCCHHHHH
Q 021659          189 NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDV-DLIQWIQESSISSSIHRMIDPDLGGSYDSKELK  265 (309)
Q Consensus       189 ~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  265 (309)
                      ...+++.|.|||....  .+.++||||||+++++|++|+.||.+.. ......... .....     +.......   ..
T Consensus       195 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~---~~  265 (310)
T 2wqm_A          195 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI-EQCDY-----PPLPSDHY---SE  265 (310)
T ss_dssp             ----CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHH-HTTCS-----CCCCTTTS---CH
T ss_pred             ccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHh-hcccC-----CCCccccc---CH
Confidence            2357788999996433  4678999999999999999999997543 222222111 11111     11111111   23


Q ss_pred             HHHHHHHHccCCCCCCCCChHHHHHHHhhhhcccccccc
Q 021659          266 KLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCYKYS  304 (309)
Q Consensus       266 ~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~~~~~  304 (309)
                      .+.+++.+||..||++|||+.++++.|+++.....++.+
T Consensus       266 ~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~~~  304 (310)
T 2wqm_A          266 ELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSLE  304 (310)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC----
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhhhh
Confidence            455666699999999999999999999998877766643

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=1.1e-40  Score=295.23  Aligned_cols=245  Identities=17%  Similarity=0.187  Sum_probs=185.5

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccccc----HHHHHHHHHHHccCCCCCcceEeeeEeC-C----eeEEEEee
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLE----KDAFYREIQLLGRLHHRHLLALQGFSTG-R----KRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~----~~~~~~ei~~l~~l~h~niv~~~~~~~~-~----~~~lv~e~  113 (309)
                      +.||+|+||.||+++. .+++.||+|++......    ...+.+|+.++++++||||+++++++.. .    ..++||||
T Consensus        18 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~   97 (311)
T 3ork_A           18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEY   97 (311)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred             EEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEec
Confidence            6899999999999997 56899999999643322    2468899999999999999999997643 1    24899999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-----
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-----  188 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-----  188 (309)
                      +++++|.+++..  ...+++..++.++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....     
T Consensus        98 ~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~  172 (311)
T 3ork_A           98 VDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFS---HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS  172 (311)
T ss_dssp             CCEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEEETTSCEEECCCSCC---------
T ss_pred             CCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccccc
Confidence            999999999976  46799999999999999999999   77899999999999999999999999999986432     


Q ss_pred             -----ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCH
Q 021659          189 -----NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDS  261 (309)
Q Consensus       189 -----~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  261 (309)
                           ...+++.|+|||...+  .+.++||||||+++|+|++|+.||.+......................+    ..  
T Consensus       173 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~----~~--  246 (311)
T 3ork_A          173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHE----GL--  246 (311)
T ss_dssp             ---------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHST----TC--
T ss_pred             cccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccC----CC--
Confidence                 1347899999997443  4778999999999999999999998765433222221111111000011    11  


Q ss_pred             HHHHHHHHHHHHccCCCCCCCCChH-HHHHHHhhhhccccc
Q 021659          262 KELKKLLAVARLCIKTKDKPTISIP-QISRYLQNEVDIQCY  301 (309)
Q Consensus       262 ~~~~~l~~l~~~cl~~dp~~Rps~~-evl~~L~~~~~~~~~  301 (309)
                        ...+.+++.+||+.||++||++. ++.+.|......+.+
T Consensus       247 --~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~~  285 (311)
T 3ork_A          247 --SADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPP  285 (311)
T ss_dssp             --CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTTCCC
T ss_pred             --CHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcCCCC
Confidence              24566777799999999999666 455666665554443

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=2e-40  Score=295.46  Aligned_cols=237  Identities=17%  Similarity=0.248  Sum_probs=185.6

Q ss_pred             cccccCCCceEEEEEEc-CCcE----EEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEV----ALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~----va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||+|.+. ++..    |++|.+....  ...+.+.+|+.++++++||||+++++++.+...++||||+++
T Consensus        19 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~   98 (325)
T 3kex_A           19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLVTQYLPL   98 (325)
T ss_dssp             EEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBSSEEEEEECCTT
T ss_pred             eeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCccEEEEEeCCC
Confidence            58999999999999963 3443    7778774322  223467789999999999999999999988888999999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc--------
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR--------  188 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~--------  188 (309)
                      |+|.+++... ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....        
T Consensus        99 ~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~  174 (325)
T 3kex_A           99 GSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYL---EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLY  174 (325)
T ss_dssp             CBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHH---HHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC-
T ss_pred             CCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHH---HhCCCCCCccchheEEECCCCeEEECCCCcccccCcccccccc
Confidence            9999999753 35788999999999999999999   77799999999999999999999999999987542        


Q ss_pred             -ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccH--HHHHHHhcccccccccccCcCCCCCCHH
Q 021659          189 -NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDL--IQWIQESSISSSIHRMIDPDLGGSYDSK  262 (309)
Q Consensus       189 -~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~  262 (309)
                       ...++..|+|||...  ..+.++||||||+++|+|++ |..||.+....  ...+... .....+...           
T Consensus       175 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~-----------  242 (325)
T 3kex_A          175 SEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKG-ERLAQPQIC-----------  242 (325)
T ss_dssp             ----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTT-CBCCCCTTB-----------
T ss_pred             cCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcC-CCCCCCCcC-----------
Confidence             224556899999643  45788999999999999999 99999764322  1212111 011111111           


Q ss_pred             HHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          263 ELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       263 ~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                       ...+.+++.+||..||++|||+.++++.|+.+..
T Consensus       243 -~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~  276 (325)
T 3kex_A          243 -TIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR  276 (325)
T ss_dssp             -CTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred             -cHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence             1234467779999999999999999999987754

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=1.9e-40  Score=302.66  Aligned_cols=243  Identities=15%  Similarity=0.177  Sum_probs=185.9

Q ss_pred             cccccC--CCceEEEEEEc-CCcEEEEEEecccccc---HHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCC
Q 021659           44 RIVYTN--SHGAAYKARFQ-DGEVALVKEIQALNLE---KDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G--~~~~v~~~~~~-~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~  116 (309)
                      +.||+|  +||.||+++.. +++.||+|++......   .+.+.+|+.++++++||||+++++++. +...++||||+++
T Consensus        31 ~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  110 (389)
T 3gni_B           31 TVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAY  110 (389)
T ss_dssp             EEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             ecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccCC
Confidence            689999  99999999975 6899999999654332   356788999999999999999999765 4788899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc--------
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR--------  188 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~--------  188 (309)
                      ++|.+++.......+++..+..++.|++.||.||   |+.+|+||||||+||+++.++.+||+|||.+....        
T Consensus       111 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~  187 (389)
T 3gni_B          111 GSAKDLICTHFMDGMNELAIAYILQGVLKALDYI---HHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRV  187 (389)
T ss_dssp             CBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSC
T ss_pred             CCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEEcccccceeeccccccccc
Confidence            9999999764457799999999999999999999   77899999999999999999999999999864321        


Q ss_pred             ------ccCCCCCCCCCCCCC----CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcC---
Q 021659          189 ------NYATMPHSSCPEDCS----TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDL---  255 (309)
Q Consensus       189 ------~~~~~~~~~~PE~~~----~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l---  255 (309)
                            ...++..|+|||...    ..+.++|||||||++|+|++|+.||.+............  +..+.+.+...   
T Consensus       188 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  265 (389)
T 3gni_B          188 VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLN--GTVPCLLDTSTIPA  265 (389)
T ss_dssp             BCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC------------------
T ss_pred             cccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc--CCCCcccccccccc
Confidence                  125677799999643    357889999999999999999999976433222211110  00000000000   


Q ss_pred             ---------------------------------CCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          256 ---------------------------------GGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       256 ---------------------------------~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                                                       ...........+.+++.+||+.||++|||+.|+++.
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h  334 (389)
T 3gni_B          266 EELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH  334 (389)
T ss_dssp             ----------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             ccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence                                             000111123457777889999999999999999843

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=5.8e-40  Score=287.13  Aligned_cols=237  Identities=16%  Similarity=0.172  Sum_probs=183.6

Q ss_pred             cccccccCCCceEEEEEE-cCCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           42 FHRIVYTNSHGAAYKARF-QDGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.+.||+|+||.||++.. .++..+|+|.+....  ...+.+.+|++++++++||||+++++++.+ ...++||||++++
T Consensus        26 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~  105 (285)
T 3is5_A           26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGG  105 (285)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCC
T ss_pred             ecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCC
Confidence            347899999999999997 457899999985433  345789999999999999999999998765 6778999999999


Q ss_pred             CHHHhhcCC--CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceee---CCCCceeEeccccccccc----
Q 021659          118 SLKEHLNDP--LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIML---DENFTAKLSDVGFFNSVR----  188 (309)
Q Consensus       118 sL~~~i~~~--~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill---~~~~~~kl~dfg~~~~~~----  188 (309)
                      +|.+++...  ....+++..++.++.+++.||.||   |+.+++||||||+||++   +.++.+||+|||++....    
T Consensus       106 ~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~  182 (285)
T 3is5_A          106 ELLERIVSAQARGKALSEGYVAELMKQMMNALAYF---HSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH  182 (285)
T ss_dssp             BHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC------
T ss_pred             cHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHH---HhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCccc
Confidence            999988531  246799999999999999999999   77899999999999999   456789999999986543    


Q ss_pred             --ccCCCCCCCCCCCCC-CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHH
Q 021659          189 --NYATMPHSSCPEDCS-TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELK  265 (309)
Q Consensus       189 --~~~~~~~~~~PE~~~-~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  265 (309)
                        ...+++.|+|||... ..+.++||||||+++++|++|+.||.+................      ........   ..
T Consensus       183 ~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~------~~~~~~~~---~~  253 (285)
T 3is5_A          183 STNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPN------YAVECRPL---TP  253 (285)
T ss_dssp             ----CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC------CCC--CCC---CH
T ss_pred             CcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcc------cccccCcC---CH
Confidence              345788899999643 3477899999999999999999999865322111111111000      00000111   23


Q ss_pred             HHHHHHHHccCCCCCCCCChHHHHH
Q 021659          266 KLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       266 ~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .+.+++.+||+.||++|||+.|+++
T Consensus       254 ~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          254 QAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             HHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhc
Confidence            4556677999999999999999985

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=1.6e-40  Score=295.96  Aligned_cols=231  Identities=17%  Similarity=0.224  Sum_probs=180.1

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccc--cccHHHHHHHHHHHccCCCCCcceEeeeEeCC---------------
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQAL--NLEKDAFYREIQLLGRLHHRHLLALQGFSTGR---------------  105 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~--~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~---------------  105 (309)
                      +.||+|+||.||+|+.. +++.||+|++...  ....+.+.+|++++++++||||+++++++.+.               
T Consensus        12 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~   91 (332)
T 3qd2_B           12 QCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLK   91 (332)
T ss_dssp             EEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC----
T ss_pred             eEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhc
Confidence            68999999999999985 7899999998533  23356799999999999999999999976321               


Q ss_pred             -------------------------------------------eeEEEEeeCCCCCHHHhhcCCC-CCCCCHHHHHHHHH
Q 021659          106 -------------------------------------------KRLLVFDNIENGSLKEHLNDPL-KTPLDWKTRLQIAI  141 (309)
Q Consensus       106 -------------------------------------------~~~lv~e~~~~~sL~~~i~~~~-~~~l~~~~~~~i~~  141 (309)
                                                                 ..++||||+++++|.+++.... ....++..++.++.
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~  171 (332)
T 3qd2_B           92 DESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFI  171 (332)
T ss_dssp             ----------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHH
T ss_pred             cccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHH
Confidence                                                       2689999999999999998642 24466777899999


Q ss_pred             HHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------------------cCCCCCCCCCCCC
Q 021659          142 GVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------------------YATMPHSSCPEDC  202 (309)
Q Consensus       142 ~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------------------~~~~~~~~~PE~~  202 (309)
                      |++.||.||   |+.+++||||||+||+++.++.+||+|||++.....                   ..+|+.|+|||..
T Consensus       172 qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  248 (332)
T 3qd2_B          172 QIAEAVEFL---HSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQI  248 (332)
T ss_dssp             HHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHH
T ss_pred             HHHHHHHHH---HhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHh
Confidence            999999999   778999999999999999999999999999875432                   2478899999964


Q ss_pred             C--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCC
Q 021659          203 S--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDK  280 (309)
Q Consensus       203 ~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~  280 (309)
                      .  ..+.++||||||+++++|++|..|+............    ...     +.    ........+.+++.+||+.||+
T Consensus       249 ~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~~----~~~-----~~----~~~~~~~~~~~li~~~l~~~p~  315 (332)
T 3qd2_B          249 HGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRN----LKF-----PL----LFTQKYPQEHMMVQDMLSPSPT  315 (332)
T ss_dssp             HCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHT----TCC-----CH----HHHHHCHHHHHHHHHHHCSSGG
T ss_pred             cCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhhc----cCC-----Cc----ccccCChhHHHHHHHHccCCCC
Confidence            3  3578899999999999999988775432211111111    000     00    0112234556788899999999


Q ss_pred             CCCChHHHHH
Q 021659          281 PTISIPQISR  290 (309)
Q Consensus       281 ~Rps~~evl~  290 (309)
                      +|||+.|+++
T Consensus       316 ~Rps~~~~l~  325 (332)
T 3qd2_B          316 ERPEATDIIE  325 (332)
T ss_dssp             GSCCHHHHHH
T ss_pred             cCCCHHHHhh
Confidence            9999999986

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=5.3e-41  Score=295.59  Aligned_cols=250  Identities=16%  Similarity=0.260  Sum_probs=186.9

Q ss_pred             ccccccCCCceEEEEEE-----cCCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeC---CeeEEEEe
Q 021659           43 HRIVYTNSHGAAYKARF-----QDGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTG---RKRLLVFD  112 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-----~~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~---~~~~lv~e  112 (309)
                      .+.||+|+||.||++++     .+++.||+|.+....  ...+.+.+|++++++++||||+++++++..   ...++|||
T Consensus        26 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e  105 (302)
T 4e5w_A           26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIME  105 (302)
T ss_dssp             EEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEE
T ss_pred             hhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEE
Confidence            36899999999999984     468899999985432  345778999999999999999999998754   45689999


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc----
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----  188 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----  188 (309)
                      |+++++|.+++... ...+++..++.++.+++.||.||   |+.+++||||||+||+++.++.+||+|||++....    
T Consensus       106 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  181 (302)
T 4e5w_A          106 FLPSGSLKEYLPKN-KNKINLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE  181 (302)
T ss_dssp             CCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCC
T ss_pred             eCCCCcHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHh---hcCCcccCCCchheEEEcCCCCEEECcccccccccCCCc
Confidence            99999999999542 35699999999999999999999   77899999999999999999999999999986543    


Q ss_pred             ------ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccc----cccccccCcCC
Q 021659          189 ------NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISS----SIHRMIDPDLG  256 (309)
Q Consensus       189 ------~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~  256 (309)
                            ...++..|.|||...+  .+.++||||||+++++|++|..|+.................    .....+.....
T Consensus       182 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (302)
T 4e5w_A          182 YYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKR  261 (302)
T ss_dssp             EEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCC
T ss_pred             ceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCC
Confidence                  2345566999996433  46789999999999999999998643321111000000000    00000000000


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhh
Q 021659          257 GSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEV  296 (309)
Q Consensus       257 ~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~  296 (309)
                      ...+......+.+++.+||+.||++|||+.++++.|++++
T Consensus       262 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          262 LPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence            0111112345667777999999999999999999999765

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=2.4e-40  Score=297.97  Aligned_cols=230  Identities=17%  Similarity=0.250  Sum_probs=186.0

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||+++.. +++.||+|++....    ...+.+.+|+.++++++||||+++++++.+ ...|+||||+++|
T Consensus        47 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~gg  126 (350)
T 1rdq_E           47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG  126 (350)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred             EEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCC
Confidence            68999999999999974 68999999985432    334678899999999999999999997765 6788999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc----ccCCC
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----NYATM  193 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----~~~~~  193 (309)
                      +|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....    ...+|
T Consensus       127 ~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~~~gt  201 (350)
T 1rdq_E          127 EMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGT  201 (350)
T ss_dssp             BHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEEC
T ss_pred             cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCcccccCccceEEECCCCCEEEcccccceeccCCcccccCC
Confidence            99999976  46799999999999999999999   77899999999999999999999999999987553    33578


Q ss_pred             CCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHH
Q 021659          194 PHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVA  271 (309)
Q Consensus       194 ~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~  271 (309)
                      +.|+|||...  ..+.++|+||||+++|+|++|+.||.+............  +.      ...+...    ...+.+++
T Consensus       202 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~--~~------~~~p~~~----~~~~~~li  269 (350)
T 1rdq_E          202 PEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--GK------VRFPSHF----SSDLKDLL  269 (350)
T ss_dssp             GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--CC------CCCCTTC----CHHHHHHH
T ss_pred             ccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHc--CC------CCCCCCC----CHHHHHHH
Confidence            8999999643  347889999999999999999999986543222111111  11      1111122    23455666


Q ss_pred             HHccCCCCCCCCC-----hHHHHH
Q 021659          272 RLCIKTKDKPTIS-----IPQISR  290 (309)
Q Consensus       272 ~~cl~~dp~~Rps-----~~evl~  290 (309)
                      .+||+.||++||+     +.|+++
T Consensus       270 ~~lL~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          270 RNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             HHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             HHHhhcCHHhccCCccCCHHHHHh
Confidence            6999999999998     788874

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=4.6e-41  Score=302.79  Aligned_cols=254  Identities=15%  Similarity=0.132  Sum_probs=192.6

Q ss_pred             cccccCCCceEEEEEEc---------CCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcce---------------Ee
Q 021659           44 RIVYTNSHGAAYKARFQ---------DGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLA---------------LQ   99 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~---------~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~---------------~~   99 (309)
                      +.||+|+||.||+|...         +++.||+|.+...    +.+.+|++++++++||||++               ++
T Consensus        48 ~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~  123 (352)
T 2jii_A           48 SFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCM  123 (352)
T ss_dssp             EEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCC
T ss_pred             EEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccchhhhhhhhccCCccCccchh
Confidence            68999999999999975         3789999998643    35889999999999999987               55


Q ss_pred             eeEe--CCeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCC--c
Q 021659          100 GFST--GRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENF--T  175 (309)
Q Consensus       100 ~~~~--~~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~--~  175 (309)
                      +++.  +...++||||+ +++|.+++.......+++..++.++.|++.||.||   |+.+++||||||+||+++.++  .
T Consensus       124 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dikp~NIl~~~~~~~~  199 (352)
T 2jii_A          124 GFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFL---HENEYVHGNVTAENIFVDPEDQSQ  199 (352)
T ss_dssp             EEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHH---HHTTCBCSCCCGGGEEEETTEEEE
T ss_pred             hccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCCHHHEEEcCCCCce
Confidence            6554  46788999999 88999999864347899999999999999999999   777999999999999999988  8


Q ss_pred             eeEeccccccccc--------------ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHH
Q 021659          176 AKLSDVGFFNSVR--------------NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQ  239 (309)
Q Consensus       176 ~kl~dfg~~~~~~--------------~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~  239 (309)
                      +||+|||++....              ...+++.|+|||...+  .+.++||||||+++|+|++|+.||.........+.
T Consensus       200 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~  279 (352)
T 2jii_A          200 VTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIM  279 (352)
T ss_dssp             EEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHH
T ss_pred             EEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHH
Confidence            9999999986432              2267889999997544  47789999999999999999999976431111111


Q ss_pred             Hhc--ccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcccccc-cccccc
Q 021659          240 ESS--ISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCYK-YSRVSF  308 (309)
Q Consensus       240 ~~~--~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~~~-~~~~~~  308 (309)
                      ...  .......+..+.......+   ..+.+++.+||+.||++|||+.++++.|+++++....+ ..+.||
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~~~~~dw  348 (352)
T 2jii_A          280 KQKQKFVDKPGPFVGPCGHWIRPS---ETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVSPYDPIGL  348 (352)
T ss_dssp             HHHHHHHHSCCCEECTTSCEECCC---HHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCTTSCCCC
T ss_pred             HHHHhccCChhhhhhhccccCCCc---HHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCCCcCccccC
Confidence            110  0111122222221111112   44556666999999999999999999999888765544 455555

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=3.9e-40  Score=296.80  Aligned_cols=236  Identities=14%  Similarity=0.162  Sum_probs=183.6

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEeccc------cccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeC
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQAL------NLEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNI  114 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~------~~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~  114 (309)
                      .+.||+|+||.||+|.. .+++.||+|++...      ....+.+.+|+.++++++||||+++++++. +...|+||||+
T Consensus        29 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~  108 (351)
T 3c0i_A           29 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM  108 (351)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             eeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCC
Confidence            36899999999999997 46899999998532      124578999999999999999999999765 47888999999


Q ss_pred             CCCCHHHhhcCC--CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCc---eeEeccccccccc-
Q 021659          115 ENGSLKEHLNDP--LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFT---AKLSDVGFFNSVR-  188 (309)
Q Consensus       115 ~~~sL~~~i~~~--~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~---~kl~dfg~~~~~~-  188 (309)
                      ++++|.+.+...  ....+++..+..++.|++.||.||   |+++++||||||+||+++.++.   +||+|||++.... 
T Consensus       109 ~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~l---H~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~  185 (351)
T 3c0i_A          109 DGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC---HDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE  185 (351)
T ss_dssp             SSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCT
T ss_pred             CCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHH---HHCCceeccCChHHeEEecCCCCCcEEEecCcceeEecC
Confidence            999998877532  245689999999999999999999   7789999999999999987654   9999999986543 


Q ss_pred             ------ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCC
Q 021659          189 ------NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYD  260 (309)
Q Consensus       189 ------~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  260 (309)
                            ...+|+.|+|||....  .+.++|||||||++|+|++|+.||.+....  ....... ....  ..+.....  
T Consensus       186 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~i~~-~~~~--~~~~~~~~--  258 (351)
T 3c0i_A          186 SGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER--LFEGIIK-GKYK--MNPRQWSH--  258 (351)
T ss_dssp             TSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHH--HHHHHHH-TCCC--CCHHHHTT--
T ss_pred             CCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHH--HHHHHHc-CCCC--CCcccccc--
Confidence                  2357889999997533  478899999999999999999999865321  1111110 0000  00000001  


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          261 SKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       261 ~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                        ....+.+++.+||+.||++|||+.|+++
T Consensus       259 --~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          259 --ISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             --SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             --CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence              1245566777999999999999999984

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.1e-40  Score=302.12  Aligned_cols=242  Identities=16%  Similarity=0.210  Sum_probs=188.0

Q ss_pred             ccccccCCCceEEEEEEc------CCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEee
Q 021659           43 HRIVYTNSHGAAYKARFQ------DGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~------~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      .+.||+|+||.||+|.+.      ++..||+|++....  .....+.+|+.++++++||||+++++++.+ ...++||||
T Consensus        76 ~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~  155 (367)
T 3l9p_A           76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLEL  155 (367)
T ss_dssp             EEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             eeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEe
Confidence            367999999999999942      46789999985432  234568899999999999999999998765 677899999


Q ss_pred             CCCCCHHHhhcCC-----CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCC---ceeEecccccc
Q 021659          114 IENGSLKEHLNDP-----LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENF---TAKLSDVGFFN  185 (309)
Q Consensus       114 ~~~~sL~~~i~~~-----~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~---~~kl~dfg~~~  185 (309)
                      +++|+|.+++...     ....+++..++.++.|++.||.||   |+++++||||||+||+++.++   .+||+|||++.
T Consensus       156 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~  232 (367)
T 3l9p_A          156 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL---EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR  232 (367)
T ss_dssp             CTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHH
T ss_pred             CCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHH---HhCCeeCCCCChhhEEEecCCCCceEEECCCcccc
Confidence            9999999999642     125699999999999999999999   778999999999999999554   59999999986


Q ss_pred             cc---------cccCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccC
Q 021659          186 SV---------RNYATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDP  253 (309)
Q Consensus       186 ~~---------~~~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (309)
                      ..         ....+|+.|+|||..  ...+.++|||||||++++|++ |..||....... .........      .+
T Consensus       233 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~-~~~~i~~~~------~~  305 (367)
T 3l9p_A          233 DIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE-VLEFVTSGG------RM  305 (367)
T ss_dssp             HHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-HHHHHHTTC------CC
T ss_pred             ccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHcCC------CC
Confidence            32         123457789999964  345788999999999999998 999997654322 111111111      01


Q ss_pred             cCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcc
Q 021659          254 DLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDI  298 (309)
Q Consensus       254 ~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~  298 (309)
                      ......    ...+.+++.+||+.||++|||+.++++.|+...+-
T Consensus       306 ~~~~~~----~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~  346 (367)
T 3l9p_A          306 DPPKNC----PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD  346 (367)
T ss_dssp             CCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             CCCccC----CHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence            111111    23466777799999999999999999999876553

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=1.4e-40  Score=305.08  Aligned_cols=239  Identities=15%  Similarity=0.213  Sum_probs=186.9

Q ss_pred             hcccc--cccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEE
Q 021659           39 TDGFH--RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLV  110 (309)
Q Consensus        39 ~~~~~--~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv  110 (309)
                      ..+|.  +.||+|+||.||+|+.. +++.||+|++....    ...+.+.+|+.+++.++||||+++++++.+ ...|+|
T Consensus        68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV  147 (410)
T 3v8s_A           68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMV  147 (410)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence            34454  58999999999999975 58899999985422    223458899999999999999999997765 678899


Q ss_pred             EeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc--
Q 021659          111 FDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR--  188 (309)
Q Consensus       111 ~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~--  188 (309)
                      |||+++|+|.+++..   ..+++..+..++.+++.||.||   |+.+|+||||||+||+++.++.+||+|||++....  
T Consensus       148 ~E~~~gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~L---H~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~  221 (410)
T 3v8s_A          148 MEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAI---HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE  221 (410)
T ss_dssp             ECCCTTEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             EeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHH---HHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccC
Confidence            999999999999975   5689999999999999999999   77899999999999999999999999999986432  


Q ss_pred             ------ccCCCCCCCCCCCCCC------CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCC
Q 021659          189 ------NYATMPHSSCPEDCST------QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLG  256 (309)
Q Consensus       189 ------~~~~~~~~~~PE~~~~------~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  256 (309)
                            ...+|+.|+|||....      ++.++|+||||+++|+|++|+.||.+................ ...  |.  
T Consensus       222 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~-~~~--p~--  296 (410)
T 3v8s_A          222 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNS-LTF--PD--  296 (410)
T ss_dssp             SEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH-CCC--CT--
T ss_pred             CcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhcccc-ccC--CC--
Confidence                  3468999999996432      457899999999999999999999865433222211111000 000  10  


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCC--CCChHHHHHH
Q 021659          257 GSYDSKELKKLLAVARLCIKTKDKP--TISIPQISRY  291 (309)
Q Consensus       257 ~~~~~~~~~~l~~l~~~cl~~dp~~--Rps~~evl~~  291 (309)
                      ....+   ..+.+++.+||..+|++  ||++.|+++.
T Consensus       297 ~~~~s---~~~~~li~~lL~~~~~rlgR~~~~ei~~H  330 (410)
T 3v8s_A          297 DNDIS---KEAKNLICAFLTDREVRLGRNGVEEIKRH  330 (410)
T ss_dssp             TCCCC---HHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred             ccccc---HHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence            01112   34555666999999988  9999999953

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=2.9e-41  Score=298.60  Aligned_cols=244  Identities=17%  Similarity=0.244  Sum_probs=191.0

Q ss_pred             ccccccCCCceEEEEEE------cCCcEEEEEEeccccc--cHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEe
Q 021659           43 HRIVYTNSHGAAYKARF------QDGEVALVKEIQALNL--EKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFD  112 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~------~~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e  112 (309)
                      .+.||+|+||.||+|.+      .+++.||+|.+.....  ..+.+.+|+.+++++ +||||+++++++.+ ...++|||
T Consensus        28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e  107 (313)
T 1t46_A           28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITE  107 (313)
T ss_dssp             EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             HHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEe
Confidence            36899999999999985      3467899999864432  346789999999999 89999999998765 67889999


Q ss_pred             eCCCCCHHHhhcCCC----------------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCce
Q 021659          113 NIENGSLKEHLNDPL----------------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTA  176 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~----------------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~  176 (309)
                      |+++++|.+++....                ...+++..++.++.|++.||.||   |+.+++||||||+||+++.++.+
T Consensus       108 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~  184 (313)
T 1t46_A          108 YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRIT  184 (313)
T ss_dssp             CCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEETTTEE
T ss_pred             cCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCccceEEEcCCCCE
Confidence            999999999997532                12589999999999999999999   77899999999999999999999


Q ss_pred             eEeccccccccccc---------CCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhccc
Q 021659          177 KLSDVGFFNSVRNY---------ATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSIS  244 (309)
Q Consensus       177 kl~dfg~~~~~~~~---------~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~  244 (309)
                      ||+|||++......         .+++.|+|||..  ...++++||||||+++++|++ |..||.+..............
T Consensus       185 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~  264 (313)
T 1t46_A          185 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG  264 (313)
T ss_dssp             EECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHT
T ss_pred             EEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccC
Confidence            99999998654322         234579999964  335788999999999999999 999997654322221111110


Q ss_pred             ccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccc
Q 021659          245 SSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQ  299 (309)
Q Consensus       245 ~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~  299 (309)
                            ..+..... .   ...+.+++.+||+.||++|||+.|+++.|++.+...
T Consensus       265 ------~~~~~~~~-~---~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  309 (313)
T 1t46_A          265 ------FRMLSPEH-A---PAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES  309 (313)
T ss_dssp             ------CCCCCCTT-S---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             ------CCCCCccc-C---CHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence                  00111111 1   245566777999999999999999999999887643

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=4.7e-40  Score=286.57  Aligned_cols=231  Identities=17%  Similarity=0.205  Sum_probs=184.9

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||++... ++..||+|++....    .....+.+|+.++++++||||+++++++.+ ...++||||++++
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   94 (279)
T 3fdn_A           15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG   94 (279)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTE
T ss_pred             eEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCCC
Confidence            68999999999999974 46789999985432    224578899999999999999999998865 6778999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-----ccCC
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-----NYAT  192 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-----~~~~  192 (309)
                      +|.+++..  ...+++..+..++.+++.||.||   |+.+++||||+|+||+++.++.++|+|||++....     ...+
T Consensus        95 ~l~~~l~~--~~~~~~~~~~~~~~qi~~~l~~L---H~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~  169 (279)
T 3fdn_A           95 TVYRELQK--LSKFDEQRTATYITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCG  169 (279)
T ss_dssp             EHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHH---HTTTCEECCCCGGGEEECTTSCEEECSCCEESCC--------CC
T ss_pred             cHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HhCCEecccCChHhEEEcCCCCEEEEeccccccCCcccccccCC
Confidence            99999876  46799999999999999999999   78899999999999999999999999999875432     3467


Q ss_pred             CCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          193 MPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       193 ~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      ++.|+|||...+  .+.++||||||+++++|++|..||................        ...+.. .   ...+.++
T Consensus       170 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--------~~~~~~-~---~~~~~~l  237 (279)
T 3fdn_A          170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE--------FTFPDF-V---TEGARDL  237 (279)
T ss_dssp             CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTC--------CCCCTT-S---CHHHHHH
T ss_pred             CCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCC--------CCCCCc-C---CHHHHHH
Confidence            889999996433  4788999999999999999999998654322221111110        111111 1   2345566


Q ss_pred             HHHccCCCCCCCCChHHHHHH
Q 021659          271 ARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       271 ~~~cl~~dp~~Rps~~evl~~  291 (309)
                      +.+||+.||++|||+.|+++.
T Consensus       238 i~~~l~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          238 ISRLLKHNPSQRPMLREVLEH  258 (279)
T ss_dssp             HHHHCCSSGGGSCCHHHHHHC
T ss_pred             HHHHhccChhhCCCHHHHhhC
Confidence            679999999999999999954

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=3.8e-40  Score=295.84  Aligned_cols=232  Identities=17%  Similarity=0.247  Sum_probs=183.1

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEecccccc---HHHHHHHHHHHccCCC--CCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLE---KDAFYREIQLLGRLHH--RHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~h--~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||++...+++.||+|++......   .+.+.+|++++++++|  +||+++++++.+ ...++||| +.++
T Consensus        15 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~   93 (343)
T 3dbq_A           15 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNI   93 (343)
T ss_dssp             EEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CCSE
T ss_pred             EEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CCCC
Confidence            689999999999999888999999998644333   3568899999999976  999999998765 67789999 5677


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---------
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---------  188 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---------  188 (309)
                      +|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++ ++.+||+|||++....         
T Consensus        94 ~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~l---H~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~  167 (343)
T 3dbq_A           94 DLNSWLKK--KKSIDPWERKSYWKNMLEAVHTI---HQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKD  167 (343)
T ss_dssp             EHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----------
T ss_pred             CHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCcceEEEE-CCcEEEeecccccccCcccccccCC
Confidence            99999986  57899999999999999999999   777999999999999996 6789999999986542         


Q ss_pred             ccCCCCCCCCCCCC-------------CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcC
Q 021659          189 NYATMPHSSCPEDC-------------STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDL  255 (309)
Q Consensus       189 ~~~~~~~~~~PE~~-------------~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l  255 (309)
                      ...+|+.|+|||..             ...+.++||||||+++|+|++|+.||...............         +..
T Consensus       168 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~---------~~~  238 (343)
T 3dbq_A          168 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID---------PNH  238 (343)
T ss_dssp             --CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHC---------TTS
T ss_pred             CCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhc---------CCc
Confidence            33588999999964             23467899999999999999999999865443333322211         111


Q ss_pred             CCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          256 GGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       256 ~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      ....+......+.+++.+||+.||++|||+.|+++.
T Consensus       239 ~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          239 EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  274 (343)
T ss_dssp             CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence            111111112345667779999999999999999854

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=2.5e-41  Score=294.50  Aligned_cols=239  Identities=18%  Similarity=0.241  Sum_probs=184.4

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC--CeeEEEEeeCCCCCHHH
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG--RKRLLVFDNIENGSLKE  121 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~--~~~~lv~e~~~~~sL~~  121 (309)
                      +.||+|++|.||++... ++.||+|.+.... ..+.+.+|++++++++||||+++++++.+  ...++||||+++++|.+
T Consensus        27 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~  104 (278)
T 1byg_A           27 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD  104 (278)
T ss_dssp             EEEEECSSCEEEEEEET-TEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHH
T ss_pred             eEEecCCCceEEEEEEc-CCEEEEEEecchh-HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHHH
Confidence            58999999999999874 7899999986543 55779999999999999999999997643  46789999999999999


Q ss_pred             hhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc----ccCCCCCCC
Q 021659          122 HLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----NYATMPHSS  197 (309)
Q Consensus       122 ~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----~~~~~~~~~  197 (309)
                      ++.......+++..+..++.+++.||.+|   |+.+++|+||+|+||+++.++.+||+|||++....    ...++..|.
T Consensus       105 ~l~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~y~  181 (278)
T 1byg_A          105 YLRSRGRSVLGGDCLLKFSLDVCEAMEYL---EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT  181 (278)
T ss_dssp             HHHHHHHHHCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECTTSCEEECCCCC------------CCTTTS
T ss_pred             HHHhcccccCCHHHHHHHHHHHHHHHHHH---HhCCccccCCCcceEEEeCCCcEEEeeccccccccccccCCCcccccc
Confidence            99753233488999999999999999999   77899999999999999999999999999986543    234667899


Q ss_pred             CCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHHc
Q 021659          198 CPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLC  274 (309)
Q Consensus       198 ~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~c  274 (309)
                      |||..  ...++++||||||+++++|++ |..||....... ........      ..+......    ...+.+++.+|
T Consensus       182 aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~-~~~~~~~~------~~~~~~~~~----~~~l~~li~~~  250 (278)
T 1byg_A          182 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-VVPRVEKG------YKMDAPDGC----PPAVYEVMKNC  250 (278)
T ss_dssp             CHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG-HHHHHTTT------CCCCCCTTC----CHHHHHHHHHH
T ss_pred             CHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHhcC------CCCCCcccC----CHHHHHHHHHH
Confidence            99974  335788999999999999998 999997543211 11111110      011111122    24556677799


Q ss_pred             cCCCCCCCCChHHHHHHHhhhhcc
Q 021659          275 IKTKDKPTISIPQISRYLQNEVDI  298 (309)
Q Consensus       275 l~~dp~~Rps~~evl~~L~~~~~~  298 (309)
                      |+.||++|||+.++++.|+++...
T Consensus       251 l~~~p~~Rps~~~l~~~L~~i~~~  274 (278)
T 1byg_A          251 WHLDAAMRPSFLQLREQLEHIKTH  274 (278)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hcCChhhCCCHHHHHHHHHHHHhh
Confidence            999999999999999999977543

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=9e-41  Score=300.10  Aligned_cols=234  Identities=18%  Similarity=0.261  Sum_probs=186.1

Q ss_pred             hcccc--cccccCCCceEEEEEEc-CCcEEEEEEeccc----cccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEE
Q 021659           39 TDGFH--RIVYTNSHGAAYKARFQ-DGEVALVKEIQAL----NLEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLL  109 (309)
Q Consensus        39 ~~~~~--~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~----~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~l  109 (309)
                      .+.|.  +.||+|+||.||+|+.. +++.||+|.+...    ....+.+..|..++..+ +||||+++++++.+ ...|+
T Consensus        16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~l   95 (345)
T 1xjd_A           16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF   95 (345)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEE
Confidence            34454  68999999999999974 5889999999643    23456788899999877 89999999997765 77889


Q ss_pred             EEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc--
Q 021659          110 VFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV--  187 (309)
Q Consensus       110 v~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~--  187 (309)
                      ||||+++|+|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++...  
T Consensus        96 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~  170 (345)
T 1xjd_A           96 VMEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFL---HSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENML  170 (345)
T ss_dssp             EEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred             EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence            9999999999999976  46799999999999999999999   7789999999999999999999999999998643  


Q ss_pred             -----cccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCC
Q 021659          188 -----RNYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYD  260 (309)
Q Consensus       188 -----~~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  260 (309)
                           ....+|+.|+|||...  ..+.++|+||||+++|+|++|+.||.+...... .......       .+..+... 
T Consensus       171 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~i~~~-------~~~~p~~~-  241 (345)
T 1xjd_A          171 GDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL-FHSIRMD-------NPFYPRWL-  241 (345)
T ss_dssp             TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHC-------CCCCCTTS-
T ss_pred             CCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHH-HHHHHhC-------CCCCCccc-
Confidence                 2346788999999643  357889999999999999999999986543221 1111110       11111111 


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCCChH-HHH
Q 021659          261 SKELKKLLAVARLCIKTKDKPTISIP-QIS  289 (309)
Q Consensus       261 ~~~~~~l~~l~~~cl~~dp~~Rps~~-evl  289 (309)
                         ...+.+++.+||..||++||++. +++
T Consensus       242 ---s~~~~~li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          242 ---EKEAKDLLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             ---CHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             ---CHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence               23455666699999999999997 665

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=1.2e-40  Score=299.33  Aligned_cols=244  Identities=13%  Similarity=0.085  Sum_probs=179.3

Q ss_pred             cccccCCCceEEEEEEc----CCcEEEEEEeccccc------------cHHHHHHHHHHHccCCCCCcceEeeeEeC---
Q 021659           44 RIVYTNSHGAAYKARFQ----DGEVALVKEIQALNL------------EKDAFYREIQLLGRLHHRHLLALQGFSTG---  104 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~----~~~~va~K~~~~~~~------------~~~~~~~ei~~l~~l~h~niv~~~~~~~~---  104 (309)
                      +.||+|+||.||+|...    .+..+|+|.......            ....+.+|+..++.++||||+++++++..   
T Consensus        43 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~~  122 (345)
T 2v62_A           43 KKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFK  122 (345)
T ss_dssp             EEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEESS
T ss_pred             eeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccccC
Confidence            58999999999999974    567899998854321            12346678889999999999999997643   


Q ss_pred             --CeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCC--ceeEec
Q 021659          105 --RKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENF--TAKLSD  180 (309)
Q Consensus       105 --~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~--~~kl~d  180 (309)
                        ...++||||+ +++|.+++..  ...+++..++.++.|++.||.||   |+.+++||||||+||+++.++  .+||+|
T Consensus       123 ~~~~~~lv~e~~-~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~~~kL~D  196 (345)
T 2v62_A          123 GRSYRFMVMERL-GIDLQKISGQ--NGTFKKSTVLQLGIRMLDVLEYI---HENEYVHGDIKAANLLLGYKNPDQVYLAD  196 (345)
T ss_dssp             SCEEEEEEEECE-EEEHHHHCBG--GGBCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEESSSTTSEEECC
T ss_pred             CCcEEEEEEecc-CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCcCHHHEEEccCCCCcEEEEe
Confidence              5678999999 8899999986  34899999999999999999999   677999999999999998777  999999


Q ss_pred             ccccccc--------------cccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHH--Hhc
Q 021659          181 VGFFNSV--------------RNYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQ--ESS  242 (309)
Q Consensus       181 fg~~~~~--------------~~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~--~~~  242 (309)
                      ||++...              ....+++.|+|||...+  .+.++||||||+++|+|++|+.||...........  ...
T Consensus       197 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~  276 (345)
T 2v62_A          197 YGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTN  276 (345)
T ss_dssp             CTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHH
T ss_pred             CCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHh
Confidence            9998644              23367899999997543  47889999999999999999999964221111111  001


Q ss_pred             ccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhh
Q 021659          243 ISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEV  296 (309)
Q Consensus       243 ~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~  296 (309)
                      .....+............   ...+.+++.+||..||++|||+.+|++.|+++.
T Consensus       277 ~~~~~~~~~~~~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  327 (345)
T 2v62_A          277 LLDELPQSVLKWAPSGSS---CCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG  327 (345)
T ss_dssp             HHHTTTHHHHHHSCTTSC---CHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred             hcccccHHHHhhcccccc---HHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence            111111111111111111   235666667999999999999999999998643

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=7e-40  Score=299.76  Aligned_cols=253  Identities=17%  Similarity=0.193  Sum_probs=196.6

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeC---CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTG---RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~---~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||+|+.. +++.||+|++....  ...+.+.+|++++++++||||+++++++..   ...++||||++++
T Consensus        15 ~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g   94 (396)
T 4eut_A           15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCG   94 (396)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTE
T ss_pred             EEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCC
Confidence            68999999999999975 48999999996433  335678899999999999999999998764   3678999999999


Q ss_pred             CHHHhhcCCC-CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceee----CCCCceeEeccccccccc----
Q 021659          118 SLKEHLNDPL-KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIML----DENFTAKLSDVGFFNSVR----  188 (309)
Q Consensus       118 sL~~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill----~~~~~~kl~dfg~~~~~~----  188 (309)
                      +|.+++.... ...+++..++.++.|++.||.||   |+.+++||||||+||++    +.++.+||+|||++....    
T Consensus        95 ~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~  171 (396)
T 4eut_A           95 SLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL---RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ  171 (396)
T ss_dssp             EHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGG
T ss_pred             CHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHH---HHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCc
Confidence            9999997632 23499999999999999999999   77899999999999999    778889999999986543    


Q ss_pred             --ccCCCCCCCCCCCCC----------CCCCCCcEeehhhHHHHHHhCCCCCCCCc---cHHHHHHHhccc---cccccc
Q 021659          189 --NYATMPHSSCPEDCS----------TQDCSNIIFQLGVLILELVTGQSPEEGDV---DLIQWIQESSIS---SSIHRM  250 (309)
Q Consensus       189 --~~~~~~~~~~PE~~~----------~~~~~~Dv~slG~~l~~l~tg~~p~~~~~---~~~~~~~~~~~~---~~~~~~  250 (309)
                        ...+++.|+|||...          ..+.++||||||+++|+|++|+.||....   .....+......   .....+
T Consensus       172 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~  251 (396)
T 4eut_A          172 FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGV  251 (396)
T ss_dssp             SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEE
T ss_pred             cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhh
Confidence              345789999999642          23678999999999999999999996421   111111111111   000000


Q ss_pred             ---------ccCcC--CCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccc
Q 021659          251 ---------IDPDL--GGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQ  299 (309)
Q Consensus       251 ---------~~~~l--~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~  299 (309)
                               ....+  ....+......+.+++.+||+.||++||++.++++.++++++..
T Consensus       252 ~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~  311 (396)
T 4eut_A          252 QKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRM  311 (396)
T ss_dssp             ECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCE
T ss_pred             eeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhce
Confidence                     00011  12334566778888888999999999999999999998877653

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=4.2e-40  Score=286.62  Aligned_cols=231  Identities=16%  Similarity=0.263  Sum_probs=171.4

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||+|.. .+++.||+|.+....    ...+.+.+|++++++++||||+++++++.+ ...++||||++++
T Consensus        17 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   96 (278)
T 3cok_A           17 NLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNG   96 (278)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred             eeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCCC
Confidence            6899999999999997 568899999985432    224678999999999999999999998765 6778999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------cc
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NY  190 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~  190 (309)
                      +|.+++... ...+++..+..++.|++.||.||   |+.+++|+||+|+||+++.++.+||+|||++....       ..
T Consensus        97 ~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~  172 (278)
T 3cok_A           97 EMNRYLKNR-VKPFSENEARHFMHQIITGMLYL---HSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTL  172 (278)
T ss_dssp             EHHHHHHTC-SSCCCHHHHHHHHHHHHHHHHHH---HHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC---------
T ss_pred             cHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcceec
Confidence            999999753 36799999999999999999999   77899999999999999999999999999986543       23


Q ss_pred             CCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHH
Q 021659          191 ATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL  268 (309)
Q Consensus       191 ~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~  268 (309)
                      .+++.|.|||....  .+.++||||||+++++|++|+.||......... ....    .   .+...+...    ...+.
T Consensus       173 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~----~---~~~~~~~~~----~~~~~  240 (278)
T 3cok_A          173 CGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL-NKVV----L---ADYEMPSFL----SIEAK  240 (278)
T ss_dssp             -------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------CC----S---SCCCCCTTS----CHHHH
T ss_pred             cCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH-HHHh----h---cccCCcccc----CHHHH
Confidence            57789999997543  478999999999999999999999764321110 0000    0   011111111    23455


Q ss_pred             HHHHHccCCCCCCCCChHHHHH
Q 021659          269 AVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       269 ~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      +++.+||+.||++|||+.++++
T Consensus       241 ~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          241 DLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHHHcccCHhhCCCHHHHhc
Confidence            6777999999999999999986

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=6.9e-40  Score=315.15  Aligned_cols=242  Identities=14%  Similarity=0.158  Sum_probs=192.4

Q ss_pred             ccccCCCceEEEEEEc---CCcEEEEEEeccc--cccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCCCCH
Q 021659           45 IVYTNSHGAAYKARFQ---DGEVALVKEIQAL--NLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSL  119 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~---~~~~va~K~~~~~--~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~~sL  119 (309)
                      .||+|+||.||+|.+.   ++..||+|++...  ....+.+.+|++++++++||||+++++++.+...++||||+++|+|
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~lv~E~~~~g~L  422 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPL  422 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESSSEEEEEECCTTCBH
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccCCeEEEEEeCCCCcH
Confidence            6899999999999864   4567999999643  2346789999999999999999999999988888999999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc----------
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN----------  189 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~----------  189 (309)
                      .+++... ...+++..+..++.|++.||.||   |+++++||||||+||+++.++.+||+|||++.....          
T Consensus       423 ~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~L---H~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~  498 (613)
T 2ozo_A          423 HKFLVGK-REEIPVSNVAELLHQVSMGMKYL---EEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA  498 (613)
T ss_dssp             HHHHTTC-TTTSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------
T ss_pred             HHHHhhc-cCCCCHHHHHHHHHHHHHHHHHH---HHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccC
Confidence            9999653 46799999999999999999999   778999999999999999999999999999875431          


Q ss_pred             cCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          190 YATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       190 ~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                      ..++..|+|||..  ...+.++||||||+++|||++ |+.||.+...... ..... .+..     ...+..    ....
T Consensus       499 ~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~-~~~i~-~~~~-----~~~p~~----~~~~  567 (613)
T 2ozo_A          499 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV-MAFIE-QGKR-----MECPPE----CPPE  567 (613)
T ss_dssp             ---CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHH-HHHHH-TTCC-----CCCCTT----CCHH
T ss_pred             CCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH-HHHHH-cCCC-----CCCCCc----CCHH
Confidence            1234689999964  345788999999999999998 9999986543221 11111 1110     111111    1245


Q ss_pred             HHHHHHHccCCCCCCCCChHHHHHHHhhhhccccc
Q 021659          267 LLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCY  301 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~~  301 (309)
                      +.+++.+||+.||++||++.+|++.|+........
T Consensus       568 l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~  602 (613)
T 2ozo_A          568 LYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS  602 (613)
T ss_dssp             HHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhcc
Confidence            66777799999999999999999999886554433

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=7.7e-41  Score=297.25  Aligned_cols=251  Identities=16%  Similarity=0.214  Sum_probs=190.1

Q ss_pred             cccccCCCceEEEEEE-----cCCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeC---CeeEEEEee
Q 021659           44 RIVYTNSHGAAYKARF-----QDGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTG---RKRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-----~~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~---~~~~lv~e~  113 (309)
                      +.||+|+||.||++.+     .+++.||+|++....  ...+.+.+|++++++++||||+++++++.+   ...++||||
T Consensus        37 ~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~  116 (318)
T 3lxp_A           37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEY  116 (318)
T ss_dssp             EEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEECC
T ss_pred             heecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEec
Confidence            6899999999999875     367899999996443  224578999999999999999999998754   567899999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc----
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN----  189 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~----  189 (309)
                      +++++|.+++..   ..+++..++.++.+++.||.||   |+.+++|+||||+||+++.++.+||+|||++.....    
T Consensus       117 ~~~~~L~~~l~~---~~~~~~~~~~i~~~l~~~l~~L---H~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~  190 (318)
T 3lxp_A          117 VPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYL---HAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY  190 (318)
T ss_dssp             CTTCBHHHHGGG---SCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSE
T ss_pred             ccCCcHHHHHhh---CCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCchheEEEcCCCCEEECCccccccccccccc
Confidence            999999999975   4599999999999999999999   778999999999999999999999999999865432    


Q ss_pred             ------cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcc----cccccccccCcCCC
Q 021659          190 ------YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSI----SSSIHRMIDPDLGG  257 (309)
Q Consensus       190 ------~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~  257 (309)
                            ..++..|+|||....  .+.++||||||+++++|++|..||...............    .......+......
T Consensus       191 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (318)
T 3lxp_A          191 YRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERL  270 (318)
T ss_dssp             EEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCC
T ss_pred             cccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCC
Confidence                  235566999997543  467899999999999999999998753221110000000    00000111111111


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcccc
Q 021659          258 SYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQC  300 (309)
Q Consensus       258 ~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~  300 (309)
                      .........+.+++.+||+.||++|||+.|+++.|+++.+.-.
T Consensus       271 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~  313 (318)
T 3lxp_A          271 PRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ  313 (318)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             CCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence            1111223456677779999999999999999999988765433

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=8.5e-40  Score=293.29  Aligned_cols=253  Identities=18%  Similarity=0.154  Sum_probs=187.8

Q ss_pred             cccccCHHHHHHhhcccccccccCCCceEEEEEE-cCCcEEEEEEeccc------cccHHHHHHHHHHHccCCCCCcceE
Q 021659           26 FIRRFSYKDIKMATDGFHRIVYTNSHGAAYKARF-QDGEVALVKEIQAL------NLEKDAFYREIQLLGRLHHRHLLAL   98 (309)
Q Consensus        26 ~~~~~~~~~i~~~~~~~~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~------~~~~~~~~~ei~~l~~l~h~niv~~   98 (309)
                      ....=++.++..... +.+.||+|+||.||+|.. .++..||+|++...      ....+.+.+|++++++++||||+++
T Consensus        15 ~~q~~~~~~~~~~y~-~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~   93 (345)
T 3hko_A           15 YFQGGSLLELQKKYH-LKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL   93 (345)
T ss_dssp             CCCCBCHHHHHHHEE-EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cccCchhhhhhhhee-ecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCccee
Confidence            334444444443221 336899999999999997 45789999998532      2334678999999999999999999


Q ss_pred             eeeEeC-CeeEEEEeeCCCCCHHHhhcCC--------------------------------------CCCCCCHHHHHHH
Q 021659           99 QGFSTG-RKRLLVFDNIENGSLKEHLNDP--------------------------------------LKTPLDWKTRLQI  139 (309)
Q Consensus        99 ~~~~~~-~~~~lv~e~~~~~sL~~~i~~~--------------------------------------~~~~l~~~~~~~i  139 (309)
                      ++++.+ ...++||||+++++|.+++...                                      ....+++..++.+
T Consensus        94 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  173 (345)
T 3hko_A           94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNI  173 (345)
T ss_dssp             EEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHH
T ss_pred             ehhhccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHH
Confidence            998765 6778999999999999998520                                      0112356778899


Q ss_pred             HHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCC--ceeEecccccccc-----------cccCCCCCCCCCCCCC---
Q 021659          140 AIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENF--TAKLSDVGFFNSV-----------RNYATMPHSSCPEDCS---  203 (309)
Q Consensus       140 ~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~--~~kl~dfg~~~~~-----------~~~~~~~~~~~PE~~~---  203 (309)
                      +.|++.||.||   |+.+++||||||+||+++.++  .+||+|||++...           ....+++.|+|||...   
T Consensus       174 ~~qi~~~l~~L---H~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  250 (345)
T 3hko_A          174 MRQIFSALHYL---HNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTN  250 (345)
T ss_dssp             HHHHHHHHHHH---HHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSS
T ss_pred             HHHHHHHHHHH---HHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCC
Confidence            99999999999   777999999999999998776  8999999998643           2345788899999643   


Q ss_pred             -CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCC
Q 021659          204 -TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPT  282 (309)
Q Consensus       204 -~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~R  282 (309)
                       ..+.++||||||+++|+|++|+.||.+.................   ..+..     ......+.+++.+||+.||++|
T Consensus       251 ~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~~~~~~li~~~l~~~p~~R  322 (345)
T 3hko_A          251 ESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCF---ENPNY-----NVLSPLARDLLSNLLNRNVDER  322 (345)
T ss_dssp             SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCT---TSGGG-----GGSCHHHHHHHHHHSCSCTTTS
T ss_pred             CCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhccccc---CCccc-----ccCCHHHHHHHHHHcCCChhHC
Confidence             34789999999999999999999998654433222211111100   00110     0112455667779999999999


Q ss_pred             CChHHHHH
Q 021659          283 ISIPQISR  290 (309)
Q Consensus       283 ps~~evl~  290 (309)
                      ||+.++++
T Consensus       323 ps~~~~l~  330 (345)
T 3hko_A          323 FDAMRALQ  330 (345)
T ss_dssp             CCHHHHHH
T ss_pred             CCHHHHhc
Confidence            99999985

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=2.7e-40  Score=295.01  Aligned_cols=230  Identities=16%  Similarity=0.205  Sum_probs=177.9

Q ss_pred             cccccCCCceEEEEEE----cCCcEEEEEEecccc-----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEee
Q 021659           44 RIVYTNSHGAAYKARF----QDGEVALVKEIQALN-----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~----~~~~~va~K~~~~~~-----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      +.||+|+||.||+++.    .+++.||+|++....     .....+.+|++++++++||||+++++++.. ...|+||||
T Consensus        23 ~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  102 (327)
T 3a62_A           23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEY  102 (327)
T ss_dssp             EEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             EEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEeC
Confidence            6899999999999997    468999999986432     223467889999999999999999997765 678899999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc------
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV------  187 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~------  187 (309)
                      +++++|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++...      
T Consensus       103 ~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~l---H~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~  177 (327)
T 3a62_A          103 LSGGELFMQLER--EGIFMEDTACFYLAEISMALGHL---HQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV  177 (327)
T ss_dssp             CTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCTTTEEECTTSCEEECCCSCC---------
T ss_pred             CCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHH---HhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccCCcc
Confidence            999999999976  46789999999999999999999   7779999999999999999999999999998643      


Q ss_pred             -cccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHH
Q 021659          188 -RNYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKEL  264 (309)
Q Consensus       188 -~~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  264 (309)
                       ....+++.|+|||...  ..+.++||||||+++|+|++|+.||.+..............        ..++...    .
T Consensus       178 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~--------~~~p~~~----~  245 (327)
T 3a62_A          178 THTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK--------LNLPPYL----T  245 (327)
T ss_dssp             -CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTC--------CCCCTTS----C
T ss_pred             ccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCC--------CCCCCCC----C
Confidence             2346889999999643  34788999999999999999999998654322211111110        1111111    2


Q ss_pred             HHHHHHHHHccCCCCCCCC-----ChHHHHH
Q 021659          265 KKLLAVARLCIKTKDKPTI-----SIPQISR  290 (309)
Q Consensus       265 ~~l~~l~~~cl~~dp~~Rp-----s~~evl~  290 (309)
                      ..+.+++.+||..||++||     ++.|+++
T Consensus       246 ~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          246 QEARDLLKKLLKRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             HHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred             HHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence            3455666699999999999     6778774

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=1.5e-40  Score=306.28  Aligned_cols=232  Identities=16%  Similarity=0.217  Sum_probs=180.5

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc---------cHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEee
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL---------EKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~---------~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~  113 (309)
                      +.||+|+||.||+|.. .+++.||+|++.....         ....+.+|++++++++||||+++++++.....++||||
T Consensus       141 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~lv~e~  220 (419)
T 3i6u_A          141 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLEL  220 (419)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESSEEEEEEEC
T ss_pred             eEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecCceEEEEEc
Confidence            6899999999999997 4578999999854321         11247899999999999999999999988888999999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCC---ceeEeccccccccc--
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENF---TAKLSDVGFFNSVR--  188 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~---~~kl~dfg~~~~~~--  188 (309)
                      +++++|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++   .+||+|||++....  
T Consensus       221 ~~~g~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~L---H~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~  295 (419)
T 3i6u_A          221 MEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYL---HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET  295 (419)
T ss_dssp             CTTCBGGGGTSS--SCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC--
T ss_pred             CCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCChHhEEEecCCCcceEEEeecccceecCCC
Confidence            999999999876  57899999999999999999999   677999999999999997544   59999999997543  


Q ss_pred             ----ccCCCCCCCCCCCCC-----CCCCCCcEeehhhHHHHHHhCCCCCCCCcc---HHHHHHHhcccccccccccCcCC
Q 021659          189 ----NYATMPHSSCPEDCS-----TQDCSNIIFQLGVLILELVTGQSPEEGDVD---LIQWIQESSISSSIHRMIDPDLG  256 (309)
Q Consensus       189 ----~~~~~~~~~~PE~~~-----~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~  256 (309)
                          ...+|+.|+|||...     .++.++||||||+++|+|++|+.||.....   ....+..... ...     +...
T Consensus       296 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~-~~~-----~~~~  369 (419)
T 3i6u_A          296 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY-NFI-----PEVW  369 (419)
T ss_dssp             ---------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCC-CCC-----HHHH
T ss_pred             ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCC-CCC-----chhh
Confidence                335789999999753     235689999999999999999999975432   2221211100 000     0000


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          257 GSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       257 ~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ..    ....+.+++.+||+.||++|||+.|+++
T Consensus       370 ~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          370 AE----VSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             TT----SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             cc----cCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence            01    1345667777999999999999999985

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=4e-40  Score=292.59  Aligned_cols=243  Identities=17%  Similarity=0.186  Sum_probs=177.6

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      +.||+|+||.||+|.. .+++.||+|.+....  ...+.+.+|++++++++||||+++++++.+ ...++||||+++ +|
T Consensus        11 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~L   89 (317)
T 2pmi_A           11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDN-DL   89 (317)
T ss_dssp             --------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCCC-BH
T ss_pred             eEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecCC-CH
Confidence            6899999999999996 458899999985432  234678899999999999999999998765 678899999985 99


Q ss_pred             HHhhcCC----CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------
Q 021659          120 KEHLNDP----LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------  188 (309)
Q Consensus       120 ~~~i~~~----~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------  188 (309)
                      .+++...    ....+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....       
T Consensus        90 ~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~l---H~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~  166 (317)
T 2pmi_A           90 KKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC---HENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFS  166 (317)
T ss_dssp             HHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCCCC
T ss_pred             HHHHHhccccccccCCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcccCC
Confidence            9888541    235689999999999999999999   77899999999999999999999999999986543       


Q ss_pred             ccCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccc-----ccccc-----ccCcC
Q 021659          189 NYATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISS-----SIHRM-----IDPDL  255 (309)
Q Consensus       189 ~~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~-----~~~~~-----~~~~l  255 (309)
                      ...+|+.|+|||...   ..+.++|||||||++|+|++|+.||.+..............+     ..+..     ..+..
T Consensus       167 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  246 (317)
T 2pmi_A          167 SEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNI  246 (317)
T ss_dssp             CCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTC
T ss_pred             CCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhccccc
Confidence            336788999999643   347889999999999999999999987654322211110000     00000     00000


Q ss_pred             CC----C--------CCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          256 GG----S--------YDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       256 ~~----~--------~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ..    .        ........+.+++.+||+.||++|||+.|+++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          247 QQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             CCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             ccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence            00    0        00011235667777999999999999999985

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=7.4e-41  Score=291.93  Aligned_cols=239  Identities=16%  Similarity=0.217  Sum_probs=189.6

Q ss_pred             cccccCCCceEEEEEEcC----CcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQD----GEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~----~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||+|.+..    +..||+|.+....  ...+.+.+|+.++++++||||+++++++.+...++||||++++
T Consensus        18 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~   97 (281)
T 3cc6_A           18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYG   97 (281)
T ss_dssp             EEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSSCEEEEECCTTC
T ss_pred             EEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCEEEEecCCCC
Confidence            689999999999998643    3469999986432  2346789999999999999999999998887889999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc--------
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN--------  189 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~--------  189 (309)
                      +|.+++... ...+++..+..++.+++.||.||   |+.+++||||||+||+++.++.+||+|||++.....        
T Consensus        98 ~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  173 (281)
T 3cc6_A           98 ELGHYLERN-KNSLKVLTLVLYSLQICKAMAYL---ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV  173 (281)
T ss_dssp             BHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---------C
T ss_pred             CHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCccceEEECCCCcEEeCccCCCccccccccccccc
Confidence            999999652 35689999999999999999999   778999999999999999999999999999865432        


Q ss_pred             cCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCcc--HHHHHHHhcccccccccccCcCCCCCCHHHH
Q 021659          190 YATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVD--LIQWIQESSISSSIHRMIDPDLGGSYDSKEL  264 (309)
Q Consensus       190 ~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  264 (309)
                      ..++..|.|||..  ...+.++||||||+++|+|++ |+.||.....  ....+.....         .......    .
T Consensus       174 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~---------~~~~~~~----~  240 (281)
T 3cc6_A          174 TRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDR---------LPKPDLC----P  240 (281)
T ss_dssp             CCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCC---------CCCCTTC----C
T ss_pred             CCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCC---------CCCCCCC----C
Confidence            2345679999964  334778999999999999998 9999964332  2222211100         1111111    2


Q ss_pred             HHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccc
Q 021659          265 KKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQ  299 (309)
Q Consensus       265 ~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~  299 (309)
                      ..+.+++.+||..||++|||+.|+++.|+++.+.+
T Consensus       241 ~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~  275 (281)
T 3cc6_A          241 PVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME  275 (281)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence            34666777999999999999999999999887654

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=1.9e-40  Score=294.99  Aligned_cols=244  Identities=18%  Similarity=0.260  Sum_probs=180.4

Q ss_pred             cccccCCCceEEEEEEcC-C---cEEEEEEeccc---cccHHHHHHHHHHHccCCCCCcceEeeeEeC-Cee------EE
Q 021659           44 RIVYTNSHGAAYKARFQD-G---EVALVKEIQAL---NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKR------LL  109 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~-~---~~va~K~~~~~---~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~------~l  109 (309)
                      +.||+|+||.||+|.... +   ..||+|.+...   ....+.+.+|++++++++||||+++++++.. ...      ++
T Consensus        29 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~  108 (323)
T 3qup_A           29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMV  108 (323)
T ss_dssp             EEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CEEE
T ss_pred             ceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCccEE
Confidence            689999999999999643 3   27999998543   2335678999999999999999999997754 222      89


Q ss_pred             EEeeCCCCCHHHhhcCC----CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccc
Q 021659          110 VFDNIENGSLKEHLNDP----LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFN  185 (309)
Q Consensus       110 v~e~~~~~sL~~~i~~~----~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~  185 (309)
                      ||||+++++|.+++...    ....+++..++.++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++.
T Consensus       109 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~L---H~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~  185 (323)
T 3qup_A          109 ILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSR  185 (323)
T ss_dssp             EEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECTTSCEEECCCCC--
T ss_pred             EEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHH---HcCCcccCCCCcceEEEcCCCCEEEeeccccc
Confidence            99999999999998531    123699999999999999999999   77899999999999999999999999999986


Q ss_pred             cccc---------cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccC
Q 021659          186 SVRN---------YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDP  253 (309)
Q Consensus       186 ~~~~---------~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (309)
                      ....         ..+++.|.|||...  ..+.++||||||+++|+|++ |..||.+............ ..      ..
T Consensus       186 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~-~~------~~  258 (323)
T 3qup_A          186 KIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIG-GN------RL  258 (323)
T ss_dssp             ---------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT-TC------CC
T ss_pred             cccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhc-CC------CC
Confidence            5422         23445799999643  34788999999999999999 9999976543221111110 00      01


Q ss_pred             cCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccccc
Q 021659          254 DLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCY  301 (309)
Q Consensus       254 ~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~~  301 (309)
                      ......    ...+.+++.+||+.||++|||+.++++.|++++.-...
T Consensus       259 ~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~  302 (323)
T 3qup_A          259 KQPPEC----MEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSV  302 (323)
T ss_dssp             CCCTTC----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC---
T ss_pred             CCCCcc----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhh
Confidence            111111    24566777799999999999999999999988765443

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=3.9e-40  Score=295.02  Aligned_cols=247  Identities=18%  Similarity=0.275  Sum_probs=192.7

Q ss_pred             cccccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHcc--CCCCCcceEeeeEeCC-----eeEEEEeeC
Q 021659           42 FHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGR--LHHRHLLALQGFSTGR-----KRLLVFDNI  114 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~--l~h~niv~~~~~~~~~-----~~~lv~e~~  114 (309)
                      +.+.||+|+||.||+++. +++.||+|.+...  ..+.+.+|++++..  ++||||+++++++...     ..++||||+
T Consensus        46 ~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  122 (342)
T 1b6c_B           46 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH  122 (342)
T ss_dssp             EEEEEEEETTEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCC
T ss_pred             EEeeecCCCCcEEEEEEE-cCccEEEEEeCch--hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeec
Confidence            447899999999999998 5889999998543  34567888888876  6899999999987642     678999999


Q ss_pred             CCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhc-----CCCCeeecccCCCceeeCCCCceeEeccccccccc-
Q 021659          115 ENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLF-----SNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-  188 (309)
Q Consensus       115 ~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~-----h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-  188 (309)
                      ++++|.+++..   ..+++..++.++.+++.||.|||..     ++.+++||||||+||+++.++.+||+|||++.... 
T Consensus       123 ~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~  199 (342)
T 1b6c_B          123 EHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS  199 (342)
T ss_dssp             TTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEET
T ss_pred             CCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceeccc
Confidence            99999999975   5699999999999999999999521     17899999999999999999999999999985432 


Q ss_pred             ----------ccCCCCCCCCCCCCCCC--------CCCCcEeehhhHHHHHHhC----------CCCCCCCc----cHHH
Q 021659          189 ----------NYATMPHSSCPEDCSTQ--------DCSNIIFQLGVLILELVTG----------QSPEEGDV----DLIQ  236 (309)
Q Consensus       189 ----------~~~~~~~~~~PE~~~~~--------~~~~Dv~slG~~l~~l~tg----------~~p~~~~~----~~~~  236 (309)
                                ...+++.|.|||.....        +.++||||||+++|+|++|          +.||....    ....
T Consensus       200 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~  279 (342)
T 1b6c_B          200 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEE  279 (342)
T ss_dssp             TTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHH
T ss_pred             cccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHH
Confidence                      23578899999975442        2579999999999999999          77876432    1122


Q ss_pred             HHHHhcccccccccccCcCCCCC-CHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccc
Q 021659          237 WIQESSISSSIHRMIDPDLGGSY-DSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQ  299 (309)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~  299 (309)
                      .......     ....+.+...+ +......+.+++.+||+.||++|||+.++++.|+++.+-+
T Consensus       280 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~  338 (342)
T 1b6c_B          280 MRKVVCE-----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE  338 (342)
T ss_dssp             HHHHHTT-----SCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHH-----HHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence            2211111     11122222211 2345677888888999999999999999999999876544

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=7.4e-40  Score=291.96  Aligned_cols=233  Identities=15%  Similarity=0.186  Sum_probs=169.8

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccccHHHHHHHHHHHccCC-CCCcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLEKDAFYREIQLLGRLH-HRHLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~-h~niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      +.||+|+||.||++... +++.||+|++...  ....+.+|+..++.+. ||||+++++++.+ ...++||||+++++|.
T Consensus        17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   94 (325)
T 3kn6_A           17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELF   94 (325)
T ss_dssp             CCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHH
Confidence            57999999999999974 5899999998543  3467889999999997 9999999998765 6788999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCC---ceeEeccccccccc-------cc
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENF---TAKLSDVGFFNSVR-------NY  190 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~---~~kl~dfg~~~~~~-------~~  190 (309)
                      +++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++   .+||+|||++....       ..
T Consensus        95 ~~l~~--~~~~~~~~~~~i~~qi~~~l~~L---H~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~  169 (325)
T 3kn6_A           95 ERIKK--KKHFSETEASYIMRKLVSAVSHM---HDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTP  169 (325)
T ss_dssp             HHHHH--CSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC--------
T ss_pred             HHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCccccc
Confidence            99986  57799999999999999999999   778999999999999997665   89999999986442       33


Q ss_pred             CCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCcc------HHHHHHHhcccccccccccCcCCCCCCHH
Q 021659          191 ATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVD------LIQWIQESSISSSIHRMIDPDLGGSYDSK  262 (309)
Q Consensus       191 ~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  262 (309)
                      .+|+.|+|||....  .+.++||||||+++|+|++|+.||.....      .......... +.      ..........
T Consensus       170 ~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~-~~------~~~~~~~~~~  242 (325)
T 3kn6_A          170 CFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKK-GD------FSFEGEAWKN  242 (325)
T ss_dssp             --------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTT-TC------CCCCSHHHHT
T ss_pred             CCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHc-CC------CCCCcccccC
Confidence            56889999997543  47789999999999999999999975432      1111111111 00      0000000011


Q ss_pred             HHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          263 ELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       263 ~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ....+.+++.+||+.||++|||+.|+++
T Consensus       243 ~s~~~~~li~~~L~~dP~~Rpt~~ell~  270 (325)
T 3kn6_A          243 VSQEAKDLIQGLLTVDPNKRLKMSGLRY  270 (325)
T ss_dssp             SCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred             CCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence            2345667777999999999999999984

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=6e-40  Score=299.63  Aligned_cols=232  Identities=16%  Similarity=0.232  Sum_probs=183.3

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEecccccc---HHHHHHHHHHHccCC--CCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLE---KDAFYREIQLLGRLH--HRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~--h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||++...+++.||+|++......   .+.+.+|++++++++  ||||+++++++.. ...++||| +.++
T Consensus        62 ~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~~  140 (390)
T 2zmd_A           62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNI  140 (390)
T ss_dssp             EEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCSE
T ss_pred             EEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCCC
Confidence            589999999999999877999999998544332   357899999999996  5999999997765 67889999 5677


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---------
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---------  188 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---------  188 (309)
                      +|.+++..  ...+++..+..++.|++.||.||   |+.+|+||||||+||+++ ++.+||+|||++....         
T Consensus       141 ~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~l---H~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~  214 (390)
T 2zmd_A          141 DLNSWLKK--KKSIDPWERKSYWKNMLEAVHTI---HQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKD  214 (390)
T ss_dssp             EHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHH---HTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC---------C
T ss_pred             CHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCccccCC
Confidence            99999986  46789999999999999999999   788999999999999995 5799999999987542         


Q ss_pred             ccCCCCCCCCCCCCC-------------CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcC
Q 021659          189 NYATMPHSSCPEDCS-------------TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDL  255 (309)
Q Consensus       189 ~~~~~~~~~~PE~~~-------------~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l  255 (309)
                      ...+|+.|+|||...             ..+.++|||||||++|+|++|+.||.........+.........     ...
T Consensus       215 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~-----~~~  289 (390)
T 2zmd_A          215 SQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE-----IEF  289 (390)
T ss_dssp             CSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSC-----CCC
T ss_pred             CCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCcccc-----CCC
Confidence            345889999999643             34678999999999999999999998654433333222111110     011


Q ss_pred             CCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          256 GGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       256 ~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      + ...   ...+.+++.+||..||++|||+.|+++.
T Consensus       290 ~-~~~---~~~~~~li~~~L~~dP~~Rps~~ell~h  321 (390)
T 2zmd_A          290 P-DIP---EKDLQDVLKCCLKRDPKQRISIPELLAH  321 (390)
T ss_dssp             C-CCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             C-ccc---hHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence            1 111   2345566779999999999999999854

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=2.1e-40  Score=293.55  Aligned_cols=229  Identities=17%  Similarity=0.152  Sum_probs=178.1

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccccc---HHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLE---KDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||+||+|... +++.||+|++......   ......|+..+.++ +||||+++++++.+ ...++||||+ ++
T Consensus        63 ~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~~  141 (311)
T 3p1a_A           63 SRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GP  141 (311)
T ss_dssp             EEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-CC
T ss_pred             heeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-CC
Confidence            58999999999999985 6899999988543322   23455666666555 89999999998764 7788999999 55


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------ccC
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------NYA  191 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------~~~  191 (309)
                      +|.+++... ...+++..++.++.+++.||.||   |+.+++||||||+||+++.++.+||+|||++....      ...
T Consensus       142 ~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  217 (311)
T 3p1a_A          142 SLQQHCEAW-GASLPEAQVWGYLRDTLLALAHL---HSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE  217 (311)
T ss_dssp             BHHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC------CCC
T ss_pred             CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHH---HHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCCCCcccC
Confidence            999888653 35699999999999999999999   67799999999999999999999999999986543      235


Q ss_pred             CCCCCCCCCCCCC-CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          192 TMPHSSCPEDCST-QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       192 ~~~~~~~PE~~~~-~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      +|+.|+|||...+ .+.++||||||+++++|++|..|+..........    . ...+    +.....    ....+.++
T Consensus       218 gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~----~-~~~~----~~~~~~----~~~~l~~l  284 (311)
T 3p1a_A          218 GDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLR----Q-GYLP----PEFTAG----LSSELRSV  284 (311)
T ss_dssp             CCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHT----T-TCCC----HHHHTT----SCHHHHHH
T ss_pred             CCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHh----c-cCCC----cccccC----CCHHHHHH
Confidence            7889999997544 4788999999999999999987776543322111    1 1111    111111    13456677


Q ss_pred             HHHccCCCCCCCCChHHHHH
Q 021659          271 ARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       271 ~~~cl~~dp~~Rps~~evl~  290 (309)
                      +.+||+.||++|||+.|+++
T Consensus       285 i~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          285 LVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             HHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHcCCChhhCcCHHHHHh
Confidence            77999999999999999985

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=3.1e-40  Score=318.53  Aligned_cols=236  Identities=17%  Similarity=0.220  Sum_probs=189.5

Q ss_pred             ccccCCCceEEEEEEc---CCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCCCC
Q 021659           45 IVYTNSHGAAYKARFQ---DGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGS  118 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~---~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~~s  118 (309)
                      .||+|+||.||+|.+.   .++.||+|++.....   ..+++.+|++++++++||||+++++++.+...++||||+++|+
T Consensus       376 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~lv~E~~~~g~  455 (635)
T 4fl3_A          376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGP  455 (635)
T ss_dssp             EEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTEE
T ss_pred             EeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEEEccCCCC
Confidence            6999999999999763   457899999965332   2478999999999999999999999998888899999999999


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc---------
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN---------  189 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~---------  189 (309)
                      |.+++..  ...+++..+..++.|++.||.||   |+.+|+||||||+||+++.++.+||+|||++.....         
T Consensus       456 L~~~l~~--~~~l~~~~~~~i~~qi~~~L~yL---H~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~  530 (635)
T 4fl3_A          456 LNKYLQQ--NRHVKDKNIIELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT  530 (635)
T ss_dssp             HHHHHHH--CTTCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---------
T ss_pred             HHHHHhh--CCCCCHHHHHHHHHHHHHHHHHH---HHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccccc
Confidence            9999976  56799999999999999999999   778999999999999999999999999999865432         


Q ss_pred             -cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHH
Q 021659          190 -YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELK  265 (309)
Q Consensus       190 -~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  265 (309)
                       ..++..|+|||...  ..+.++||||||+++|||++ |+.||.+...... .... ..+..     ...+...    ..
T Consensus       531 ~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~-~~~i-~~~~~-----~~~p~~~----~~  599 (635)
T 4fl3_A          531 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAML-EKGER-----MGCPAGC----PR  599 (635)
T ss_dssp             ----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH-HHHH-HTTCC-----CCCCTTC----CH
T ss_pred             CCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHH-HcCCC-----CCCCCCC----CH
Confidence             12346699999743  45788999999999999998 9999986543221 1111 11111     1111112    24


Q ss_pred             HHHHHHHHccCCCCCCCCChHHHHHHHhhhh
Q 021659          266 KLLAVARLCIKTKDKPTISIPQISRYLQNEV  296 (309)
Q Consensus       266 ~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~  296 (309)
                      .+.+++.+||+.||++||++.+|++.|++..
T Consensus       600 ~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~  630 (635)
T 4fl3_A          600 EMYDLMNLCWTYDVENRPGFAAVELRLRNYY  630 (635)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            5667777999999999999999999998754

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=3.7e-39  Score=284.39  Aligned_cols=235  Identities=13%  Similarity=0.187  Sum_probs=184.4

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEeccccc-cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL-EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~-~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      .+.||+|+||.||+++.. +++.||+|.+..... ..+.+.+|+.++++++||||+++++++.+ ...++||||+++++|
T Consensus        14 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   93 (304)
T 2jam_A           14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGEL   93 (304)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred             eeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccH
Confidence            368999999999999974 689999999864432 34568899999999999999999998765 677899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceee---CCCCceeEecccccccccc-----cC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIML---DENFTAKLSDVGFFNSVRN-----YA  191 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill---~~~~~~kl~dfg~~~~~~~-----~~  191 (309)
                      .+++..  ...+++..+..++.+++.||.||   |+.+++|+||+|+||++   +.++.++|+|||++.....     ..
T Consensus        94 ~~~l~~--~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~  168 (304)
T 2jam_A           94 FDRILE--RGVYTEKDASLVIQQVLSAVKYL---HENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTAC  168 (304)
T ss_dssp             HHHHHH--HSCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTHHHH
T ss_pred             HHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCcccccc
Confidence            999875  46799999999999999999999   77899999999999999   7788999999999865432     24


Q ss_pred             CCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHH
Q 021659          192 TMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLA  269 (309)
Q Consensus       192 ~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~  269 (309)
                      +++.|.|||...+  .+.++||||||+++++|++|+.||........ ....... . ... .......    ....+.+
T Consensus       169 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~i~~~-~-~~~-~~~~~~~----~~~~~~~  240 (304)
T 2jam_A          169 GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKL-FEKIKEG-Y-YEF-ESPFWDD----ISESAKD  240 (304)
T ss_dssp             SCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHC-C-CCC-CTTTTTT----SCHHHHH
T ss_pred             CCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHcC-C-CCC-Ccccccc----CCHHHHH
Confidence            7889999997644  36789999999999999999999976543221 1111110 0 000 0111111    1245666


Q ss_pred             HHHHccCCCCCCCCChHHHHH
Q 021659          270 VARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       270 l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ++.+||..||++|||+.|+++
T Consensus       241 li~~~l~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          241 FICHLLEKDPNERYTCEKALS  261 (304)
T ss_dssp             HHHHHHCSSTTTSCCHHHHHT
T ss_pred             HHHHHcCCChhHCcCHHHHhc
Confidence            777999999999999999985

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=1.2e-39  Score=288.84  Aligned_cols=236  Identities=19%  Similarity=0.244  Sum_probs=181.4

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc-ccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN-LEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~-~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      +.||+|+||.||++.. .+++.||+|++.... ...+.+.+|++++.++ +||||+++++++.+ ...++||||+++++|
T Consensus        19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   98 (316)
T 2ac3_A           19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI   98 (316)
T ss_dssp             CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred             ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcH
Confidence            4699999999999996 468899999995443 3457889999999885 79999999997754 778899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCc---eeEeccccccccc--------
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFT---AKLSDVGFFNSVR--------  188 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~---~kl~dfg~~~~~~--------  188 (309)
                      .+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.   +||+|||++....        
T Consensus        99 ~~~l~~--~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~  173 (316)
T 2ac3_A           99 LSHIHK--RRHFNELEASVVVQDVASALDFL---HNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPI  173 (316)
T ss_dssp             HHHHHH--HSSCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----------
T ss_pred             HHHHhc--cCCCCHHHHHHHHHHHHHHHHHH---HhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccc
Confidence            999976  46799999999999999999999   7779999999999999988765   9999999976432        


Q ss_pred             ------ccCCCCCCCCCCCCCC-------CCCCCcEeehhhHHHHHHhCCCCCCCCccH-------------HHHHHHhc
Q 021659          189 ------NYATMPHSSCPEDCST-------QDCSNIIFQLGVLILELVTGQSPEEGDVDL-------------IQWIQESS  242 (309)
Q Consensus       189 ------~~~~~~~~~~PE~~~~-------~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~-------------~~~~~~~~  242 (309)
                            ...+++.|+|||....       .+.++||||||+++|+|++|+.||.+....             ........
T Consensus       174 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i  253 (316)
T 2ac3_A          174 STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESI  253 (316)
T ss_dssp             --------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHH
T ss_pred             cccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHH
Confidence                  2247889999997532       478999999999999999999999754211             00010100


Q ss_pred             ccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          243 ISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       243 ~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ..... ....+.. ..    ....+.+++.+||+.||++|||+.|+++
T Consensus       254 ~~~~~-~~~~~~~-~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~  295 (316)
T 2ac3_A          254 QEGKY-EFPDKDW-AH----ISCAAKDLISKLLVRDAKQRLSAAQVLQ  295 (316)
T ss_dssp             HHCCC-CCCHHHH-TT----SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             hccCc-ccCchhc-cc----CCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence            00000 0000000 00    1245667777999999999999999987

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=5.3e-40  Score=288.76  Aligned_cols=241  Identities=18%  Similarity=0.233  Sum_probs=185.0

Q ss_pred             cccccCCCceEEEEEEcC----CcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEe--CCeeEEEEeeCC
Q 021659           44 RIVYTNSHGAAYKARFQD----GEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFST--GRKRLLVFDNIE  115 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~----~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~--~~~~~lv~e~~~  115 (309)
                      +.||+|+||.||+|...+    ...+|+|.+.....  ..+.+.+|+.++++++||||+++++++.  +...++||||++
T Consensus        31 ~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~  110 (298)
T 3f66_A           31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK  110 (298)
T ss_dssp             EEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECCT
T ss_pred             ceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCCC
Confidence            689999999999998632    23589998854332  2457889999999999999999999764  356789999999


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc------
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN------  189 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~------  189 (309)
                      +++|.+++... ...+++..++.++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++.....      
T Consensus       111 ~~~L~~~l~~~-~~~~~~~~~~~i~~ql~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~  186 (298)
T 3f66_A          111 HGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV  186 (298)
T ss_dssp             TCBHHHHHHCT-TCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC
T ss_pred             CCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCchheEEECCCCCEEECcccccccccccchhcc
Confidence            99999999753 46689999999999999999999   778999999999999999999999999999864421      


Q ss_pred             -----cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCH
Q 021659          190 -----YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDS  261 (309)
Q Consensus       190 -----~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  261 (309)
                           ..+++.|+|||...  ..++++||||||+++++|++ |.+||................       .+..+.. . 
T Consensus       187 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-~-  257 (298)
T 3f66_A          187 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR-------RLLQPEY-C-  257 (298)
T ss_dssp             -----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTC-------CCCCCTT-C-
T ss_pred             ccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCC-------CCCCCcc-C-
Confidence                 23456799999643  34778999999999999999 556665433221111111100       0111111 1 


Q ss_pred             HHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccc
Q 021659          262 KELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQ  299 (309)
Q Consensus       262 ~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~  299 (309)
                        ...+.+++.+||+.||++|||+.|+++.|+++...-
T Consensus       258 --~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~  293 (298)
T 3f66_A          258 --PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF  293 (298)
T ss_dssp             --CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred             --CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence              234666777999999999999999999999877643

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.2e-39  Score=291.40  Aligned_cols=243  Identities=16%  Similarity=0.289  Sum_probs=186.5

Q ss_pred             cccccCCCceEEEEEEcC-----CcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCC
Q 021659           44 RIVYTNSHGAAYKARFQD-----GEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIE  115 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~-----~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~  115 (309)
                      +.||+|+||.||+|....     +..||+|.+.....  ....+.+|+.++++++||||+++++++.+ ...++||||++
T Consensus        50 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  129 (333)
T 1mqb_A           50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYME  129 (333)
T ss_dssp             EEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             cEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCCC
Confidence            579999999999998643     23599999864332  23568899999999999999999998865 67789999999


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc------
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN------  189 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~------  189 (309)
                      +++|.+++... ...+++..++.++.+++.||.||   |+.+++||||||+||+++.++.+||+|||++.....      
T Consensus       130 ~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~  205 (333)
T 1mqb_A          130 NGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATY  205 (333)
T ss_dssp             TEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTCCEEECCCCC------------
T ss_pred             CCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCChheEEECCCCcEEECCCCcchhhcccccccc
Confidence            99999999652 46799999999999999999999   777999999999999999999999999999875432      


Q ss_pred             ----cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHH
Q 021659          190 ----YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSK  262 (309)
Q Consensus       190 ----~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  262 (309)
                          ..++..|+|||...  ..+.++||||||+++++|++ |+.||...... ...........      ......    
T Consensus       206 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-~~~~~~~~~~~------~~~~~~----  274 (333)
T 1mqb_A          206 TTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-EVMKAINDGFR------LPTPMD----  274 (333)
T ss_dssp             -----CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHHHHHTTCC------CCCCTT----
T ss_pred             ccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH-HHHHHHHCCCc------CCCccc----
Confidence                12345799999643  34778999999999999998 99999754322 11111111100      111111    


Q ss_pred             HHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccccc
Q 021659          263 ELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCY  301 (309)
Q Consensus       263 ~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~~  301 (309)
                      ....+.+++.+||+.||++||++.++++.|+++......
T Consensus       275 ~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~  313 (333)
T 1mqb_A          275 CPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDS  313 (333)
T ss_dssp             CBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGG
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchh
Confidence            134566777799999999999999999999887765443

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=2e-39  Score=282.93  Aligned_cols=236  Identities=18%  Similarity=0.258  Sum_probs=186.5

Q ss_pred             cccccccCCCceEEEEEEc-CCcEEEEEEeccccc-------cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEe
Q 021659           42 FHRIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL-------EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFD  112 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~-------~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e  112 (309)
                      +.+.||+|+||.||++... +++.||+|.+.....       ..+.+.+|+.++++++||||+++++++.+ ...++|||
T Consensus         9 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   88 (283)
T 3bhy_A            9 MGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILE   88 (283)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEe
Confidence            3468999999999999975 588999999854321       35789999999999999999999998765 67889999


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCC----ceeEeccccccccc
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENF----TAKLSDVGFFNSVR  188 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~----~~kl~dfg~~~~~~  188 (309)
                      |+++++|.+++..  ...+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++    .+||+|||++....
T Consensus        89 ~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~  163 (283)
T 3bhy_A           89 LVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYL---HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE  163 (283)
T ss_dssp             CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred             ecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCChHHEEEecCCCCCCceEEEecccceecc
Confidence            9999999999975  46799999999999999999999   778999999999999998876    79999999986543


Q ss_pred             ------ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCC
Q 021659          189 ------NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYD  260 (309)
Q Consensus       189 ------~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  260 (309)
                            ...+++.|.|||...  ..+.++||||||+++++|++|..||.+..................    +.....  
T Consensus       164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~--  237 (283)
T 3bhy_A          164 AGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFD----EEYFSN--  237 (283)
T ss_dssp             --------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC----HHHHTT--
T ss_pred             CCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCc----chhccc--
Confidence                  235778899999643  347889999999999999999999986543322211111111000    000011  


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          261 SKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       261 ~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                        ....+.+++.+||..||++|||+.++++
T Consensus       238 --~~~~~~~li~~~l~~dp~~Rps~~~~l~  265 (283)
T 3bhy_A          238 --TSELAKDFIRRLLVKDPKRRMTIAQSLE  265 (283)
T ss_dssp             --CCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             --CCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence              1245667777999999999999999986

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=2.2e-40  Score=295.58  Aligned_cols=237  Identities=14%  Similarity=0.215  Sum_probs=184.5

Q ss_pred             cccccCCCceEEEEEEc-CCcE----EEEEEecc--ccccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEV----ALVKEIQA--LNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~----va~K~~~~--~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||+|.+. +++.    |++|.+..  .....+.+.+|+.++++++||||+++++++.....++|++|+++
T Consensus        21 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~v~~~~~~  100 (327)
T 3lzb_A           21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPF  100 (327)
T ss_dssp             EEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSSEEEEECCCSS
T ss_pred             EEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCCceEEEEecCC
Confidence            68999999999999963 3443    47776643  23346789999999999999999999999988778899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------  189 (309)
                      ++|.+++... ...+++..++.++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++.....       
T Consensus       101 g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~  176 (327)
T 3lzb_A          101 GCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA  176 (327)
T ss_dssp             CBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEEEETTEEEECCTTC-------------
T ss_pred             CcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHH---hhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccccccc
Confidence            9999998653 35699999999999999999999   777999999999999999999999999999875432       


Q ss_pred             --cCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccH--HHHHHHhcccccccccccCcCCCCCCHH
Q 021659          190 --YATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDL--IQWIQESSISSSIHRMIDPDLGGSYDSK  262 (309)
Q Consensus       190 --~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~  262 (309)
                        ..++..|+|||..  ...++++||||||+++|+|++ |..||.+....  ...+...   .      .......    
T Consensus       177 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~---~------~~~~~~~----  243 (327)
T 3lzb_A          177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG---E------RLPQPPI----  243 (327)
T ss_dssp             ---CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT---C------CCCCCTT----
T ss_pred             cCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC---C------CCCCCcc----
Confidence              2345579999964  334788999999999999999 99999764321  1111111   0      0011111    


Q ss_pred             HHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          263 ELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       263 ~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                      ....+.+++.+||+.||++|||+.|+++.|+++..
T Consensus       244 ~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  278 (327)
T 3lzb_A          244 CTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            12356677779999999999999999999988764

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=4.5e-40  Score=294.05  Aligned_cols=243  Identities=18%  Similarity=0.222  Sum_probs=182.4

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHH--HccCCCCCcceEeeeEe-----C-CeeEEEEeeCC
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQL--LGRLHHRHLLALQGFST-----G-RKRLLVFDNIE  115 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~--l~~l~h~niv~~~~~~~-----~-~~~~lv~e~~~  115 (309)
                      +.||+|+||.||+|+. +++.||+|++....  ...+..|.++  +..++||||+++++++.     . ...++||||++
T Consensus        19 ~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~   95 (336)
T 3g2f_A           19 ELIGRGRYGAVYKGSL-DERPVAVKVFSFAN--RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYP   95 (336)
T ss_dssp             EEEEECSSEEEEEEEE-TTEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCT
T ss_pred             eecccCCCeEEEEEEE-CCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCC
Confidence            6899999999999987 68899999986443  3344444444  45589999999998442     1 24579999999


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCC---------CeeecccCCCceeeCCCCceeEeccccccc
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNL---------PMYYVSISSSSIMLDENFTAKLSDVGFFNS  186 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~---------~i~H~dl~p~nill~~~~~~kl~dfg~~~~  186 (309)
                      +|+|.+++..   ...++..+..++.|++.||.||   |+.         +++||||||+||+++.++.+||+|||++..
T Consensus        96 ~g~L~~~l~~---~~~~~~~~~~i~~qi~~~L~~L---H~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~  169 (336)
T 3g2f_A           96 NGSLXKYLSL---HTSDWVSSCRLAHSVTRGLAYL---HTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR  169 (336)
T ss_dssp             TCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHH---HCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             CCcHHHHHhh---cccchhHHHHHHHHHHHHHHHH---HhhhccccccccceeecccccceEEEcCCCcEEEeeccceee
Confidence            9999999975   4568999999999999999999   555         999999999999999999999999999865


Q ss_pred             cc---------------ccCCCCCCCCCCCCCC---------CCCCCcEeehhhHHHHHHhCCCCCCCCccH--------
Q 021659          187 VR---------------NYATMPHSSCPEDCST---------QDCSNIIFQLGVLILELVTGQSPEEGDVDL--------  234 (309)
Q Consensus       187 ~~---------------~~~~~~~~~~PE~~~~---------~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~--------  234 (309)
                      ..               ...+|+.|+|||...+         .+.++|||||||++|+|++|..||......        
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~  249 (336)
T 3g2f_A          170 LTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQ  249 (336)
T ss_dssp             CSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTH
T ss_pred             cccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhh
Confidence            42               2357889999997543         246799999999999999997775332110        


Q ss_pred             --------HHHHHHhcccccccccccCcCCCC--CCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccc
Q 021659          235 --------IQWIQESSISSSIHRMIDPDLGGS--YDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQ  299 (309)
Q Consensus       235 --------~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~  299 (309)
                              ..........    ....+.++..  ........+.+++.+||+.||++|||+.|+++.|++++..-
T Consensus       250 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~  320 (336)
T 3g2f_A          250 TEVGNHPTFEDMQVLVSR----EKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW  320 (336)
T ss_dssp             HHHCSSCCHHHHHHHHTT----SCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred             cccCCCchHHHHHhhhcc----cccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence                    0000000000    1111222211  12335567888888999999999999999999999877543

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=2.2e-40  Score=293.72  Aligned_cols=238  Identities=16%  Similarity=0.178  Sum_probs=185.9

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc-ccHHHHHHHHHHHccCCCCCcceEeeeEe----C-CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN-LEKDAFYREIQLLGRLHHRHLLALQGFST----G-RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~-~~~~~~~~ei~~l~~l~h~niv~~~~~~~----~-~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||++.. .+++.||+|.+.... ...+.+.+|++++++++||||+++++++.    . ...++||||+++
T Consensus        35 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~  114 (317)
T 2buj_A           35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKR  114 (317)
T ss_dssp             EEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTT
T ss_pred             EEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCC
Confidence            6899999999999997 568999999885433 33567899999999999999999999774    1 367799999999


Q ss_pred             CCHHHhhcCC--CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------
Q 021659          117 GSLKEHLNDP--LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------  188 (309)
Q Consensus       117 ~sL~~~i~~~--~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------  188 (309)
                      ++|.+++...  ....+++..++.++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....      
T Consensus       115 ~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~  191 (317)
T 2buj_A          115 GTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI---HAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGS  191 (317)
T ss_dssp             CBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESH
T ss_pred             CcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEEcCCCCEEEEecCcchhcccccccc
Confidence            9999988641  257799999999999999999999   77799999999999999999999999999876432      


Q ss_pred             ----------ccCCCCCCCCCCCCCC-----CCCCCcEeehhhHHHHHHhCCCCCCCC----ccHHHHHHHhcccccccc
Q 021659          189 ----------NYATMPHSSCPEDCST-----QDCSNIIFQLGVLILELVTGQSPEEGD----VDLIQWIQESSISSSIHR  249 (309)
Q Consensus       189 ----------~~~~~~~~~~PE~~~~-----~~~~~Dv~slG~~l~~l~tg~~p~~~~----~~~~~~~~~~~~~~~~~~  249 (309)
                                ...+++.|.|||....     .++++||||||+++|+|++|+.||...    .........   ..   .
T Consensus       192 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~---~~---~  265 (317)
T 2buj_A          192 RQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN---QL---S  265 (317)
T ss_dssp             HHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC---C-----
T ss_pred             cccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc---cC---C
Confidence                      1235889999997543     367899999999999999999998531    111111111   00   0


Q ss_pred             cccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          250 MIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       250 ~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                        .+ ....    ....+.+++.+||+.||++|||+.++++.|+....
T Consensus       266 --~~-~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  306 (317)
T 2buj_A          266 --IP-QSPR----HSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP  306 (317)
T ss_dssp             --CC-CCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred             --CC-cccc----CCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence              00 0011    12456667779999999999999999999996543

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=4.9e-40  Score=293.97  Aligned_cols=243  Identities=17%  Similarity=0.245  Sum_probs=189.6

Q ss_pred             cccccCCCceEEEEEEc--------CCcEEEEEEeccccc--cHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEE
Q 021659           44 RIVYTNSHGAAYKARFQ--------DGEVALVKEIQALNL--EKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVF  111 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~--------~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~  111 (309)
                      +.||+|+||.||+|...        ++..||+|.+.....  ..+.+.+|+++++++ +||||+++++++.+ ...++||
T Consensus        41 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~  120 (334)
T 2pvf_A           41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV  120 (334)
T ss_dssp             EEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEEE
T ss_pred             eEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEEE
Confidence            68999999999999863        467899999864332  245788999999999 89999999998865 6788999


Q ss_pred             eeCCCCCHHHhhcCCC--------------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCcee
Q 021659          112 DNIENGSLKEHLNDPL--------------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAK  177 (309)
Q Consensus       112 e~~~~~sL~~~i~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~k  177 (309)
                      ||+++++|.+++....              ...+++..++.++.|++.||.||   |+.+++||||||+||+++.++.+|
T Consensus       121 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~k  197 (334)
T 2pvf_A          121 EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMK  197 (334)
T ss_dssp             ECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEE
T ss_pred             ECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCccceEEEcCCCCEE
Confidence            9999999999997632              13489999999999999999999   778999999999999999999999


Q ss_pred             Eecccccccccc---------cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccc
Q 021659          178 LSDVGFFNSVRN---------YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISS  245 (309)
Q Consensus       178 l~dfg~~~~~~~---------~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~  245 (309)
                      |+|||++.....         ..+++.|+|||...  ..+.++||||||+++|+|++ |..||.+.... ........ .
T Consensus       198 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~-~  275 (334)
T 2pvf_A          198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-ELFKLLKE-G  275 (334)
T ss_dssp             ECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-HHHHHHHH-T
T ss_pred             EccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH-HHHHHHhc-C
Confidence            999999864432         23456799999643  34788999999999999999 99999764321 11111111 1


Q ss_pred             cccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcccc
Q 021659          246 SIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQC  300 (309)
Q Consensus       246 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~  300 (309)
                      .     .+......    ...+.+++.+||..||++|||+.|+++.|++++....
T Consensus       276 ~-----~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~  321 (334)
T 2pvf_A          276 H-----RMDKPANC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT  321 (334)
T ss_dssp             C-----CCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred             C-----CCCCCccC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence            0     01111112    2456667779999999999999999999998877654

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=2.4e-39  Score=286.16  Aligned_cols=243  Identities=18%  Similarity=0.177  Sum_probs=183.8

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc------cHHHHHHHHHHHccCC---CCCcceEeeeEeC-C-----ee
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL------EKDAFYREIQLLGRLH---HRHLLALQGFSTG-R-----KR  107 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~------~~~~~~~ei~~l~~l~---h~niv~~~~~~~~-~-----~~  107 (309)
                      +.||+|+||.||+|+. .+++.||+|++.....      ....+.+|++++++++   ||||+++++++.. .     ..
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~   94 (308)
T 3g33_A           15 AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKV   94 (308)
T ss_dssp             EEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEE
T ss_pred             EEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeE
Confidence            6899999999999996 5688999999853321      1346778888877774   9999999997753 2     46


Q ss_pred             EEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc
Q 021659          108 LLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV  187 (309)
Q Consensus       108 ~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~  187 (309)
                      ++||||+.+ +|.+++.......+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++...
T Consensus        95 ~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~  170 (308)
T 3g33_A           95 TLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL---HANCIVHRDLKPENILVTSGGTVKLADFGLARIY  170 (308)
T ss_dssp             EEEEECCCC-BHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCTTTEEECTTSCEEECSCSCTTTS
T ss_pred             EEEehhhhc-CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEEcCCCCEEEeeCcccccc
Confidence            799999975 999999875556699999999999999999999   7789999999999999999999999999998654


Q ss_pred             c------ccCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcc--ccccccccc-----
Q 021659          188 R------NYATMPHSSCPEDC--STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSI--SSSIHRMID-----  252 (309)
Q Consensus       188 ~------~~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~--~~~~~~~~~-----  252 (309)
                      .      ...+|+.|+|||..  ...+.++|||||||++|+|++|+.||.+.............  ......+..     
T Consensus       171 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  250 (308)
T 3g33_A          171 SYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLP  250 (308)
T ss_dssp             TTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSC
T ss_pred             CCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhcc
Confidence            3      23578899999964  34588999999999999999999999876544332221110  000000000     


Q ss_pred             -CcCC--CCCC-----HHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          253 -PDLG--GSYD-----SKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       253 -~~l~--~~~~-----~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                       ....  ....     ......+.+++.+||+.||++|||+.|+++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          251 RGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             GGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence             0000  0000     011345667777999999999999999985

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.5e-40  Score=293.53  Aligned_cols=251  Identities=20%  Similarity=0.291  Sum_probs=192.9

Q ss_pred             ccccCHHHHHHhhcccc--cccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccC-CCCCcceEeeeE
Q 021659           27 IRRFSYKDIKMATDGFH--RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRL-HHRHLLALQGFS  102 (309)
Q Consensus        27 ~~~~~~~~i~~~~~~~~--~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l-~h~niv~~~~~~  102 (309)
                      ...++++++....+.|.  +.||+|+||.||+|+. .+++.||+|++.......+.+.+|+.+++++ +||||+++++++
T Consensus        11 ~~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   90 (326)
T 2x7f_A           11 LDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAF   90 (326)
T ss_dssp             -----CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEE
T ss_pred             chhccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEE
Confidence            34455555555556665  5899999999999997 4688999999976666678899999999999 799999999976


Q ss_pred             e-------CCeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCc
Q 021659          103 T-------GRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFT  175 (309)
Q Consensus       103 ~-------~~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~  175 (309)
                      .       +...++||||+++++|.+++.......+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++.
T Consensus        91 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~dlkp~NIl~~~~~~  167 (326)
T 2x7f_A           91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL---HQHKVIHRDIKGQNVLLTENAE  167 (326)
T ss_dssp             EECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEECTTCC
T ss_pred             eeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCcHHHEEEcCCCC
Confidence            4       24678999999999999999764446799999999999999999999   7779999999999999999999


Q ss_pred             eeEeccccccccc-------ccCCCCCCCCCCCCC-------CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHh
Q 021659          176 AKLSDVGFFNSVR-------NYATMPHSSCPEDCS-------TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQES  241 (309)
Q Consensus       176 ~kl~dfg~~~~~~-------~~~~~~~~~~PE~~~-------~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~  241 (309)
                      +||+|||++....       ...+++.|.|||...       ..++++||||||+++|+|++|+.||.............
T Consensus       168 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~  247 (326)
T 2x7f_A          168 VKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP  247 (326)
T ss_dssp             EEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH
T ss_pred             EEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhh
Confidence            9999999986542       235788899999643       34788999999999999999999997654433222111


Q ss_pred             cccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          242 SISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       242 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                       . ...     +.......+   ..+.+++.+||..||++|||+.++++
T Consensus       248 -~-~~~-----~~~~~~~~~---~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          248 -R-NPA-----PRLKSKKWS---KKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             -H-SCC-----CCCSCSCSC---HHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             -c-Ccc-----ccCCccccC---HHHHHHHHHHhccChhhCCCHHHHhh
Confidence             1 111     111111122   34556666999999999999999986

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.5e-40  Score=288.96  Aligned_cols=244  Identities=20%  Similarity=0.273  Sum_probs=186.3

Q ss_pred             cccccCCCceEEEEEEcC-C---cEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC--CeeEEEEeeCC
Q 021659           44 RIVYTNSHGAAYKARFQD-G---EVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG--RKRLLVFDNIE  115 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~-~---~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~--~~~~lv~e~~~  115 (309)
                      +.||+|+||.||+|.+.+ +   ..+|+|.+.....  ..+.+.+|+.++++++||||+++++++.+  ...++|+||+.
T Consensus        27 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~  106 (298)
T 3pls_A           27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMC  106 (298)
T ss_dssp             EEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCCT
T ss_pred             ceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEeccc
Confidence            679999999999998632 2   3699998864332  24578899999999999999999998754  34489999999


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------  188 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------  188 (309)
                      +++|.+++... ...+++..+..++.+++.||.||   |+.+++||||||+||+++.++.+||+|||++....       
T Consensus       107 ~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~L---H~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~  182 (298)
T 3pls_A          107 HGDLLQFIRSP-QRNPTVKDLISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSV  182 (298)
T ss_dssp             TCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCS
T ss_pred             CCCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCccccc
Confidence            99999999763 46789999999999999999999   77799999999999999999999999999986432       


Q ss_pred             ----ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHH
Q 021659          189 ----NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSK  262 (309)
Q Consensus       189 ----~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  262 (309)
                          ...+++.|.+||...+  .+.++||||||+++|+|++|..|+.................      ....... .  
T Consensus       183 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~-~--  253 (298)
T 3pls_A          183 QQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGR------RLPQPEY-C--  253 (298)
T ss_dssp             CCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTC------CCCCCTT-C--
T ss_pred             ccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCC------CCCCCcc-c--
Confidence                2245567999996543  47789999999999999996655433322211111111110      0111111 1  


Q ss_pred             HHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccccc
Q 021659          263 ELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCY  301 (309)
Q Consensus       263 ~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~~  301 (309)
                       ...+.+++.+||+.||++|||+.++++.|+++......
T Consensus       254 -~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~  291 (298)
T 3pls_A          254 -PDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG  291 (298)
T ss_dssp             -CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCS
T ss_pred             -hHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhc
Confidence             23556677799999999999999999999988765443

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=7.5e-40  Score=294.98  Aligned_cols=230  Identities=18%  Similarity=0.229  Sum_probs=183.6

Q ss_pred             cccccCCCceEEEEEEcC-CcEEEEEEeccc----cccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQD-GEVALVKEIQAL----NLEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~-~~~va~K~~~~~----~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||+++... ++.||+|++...    ....+.+..|..++..+ +||||+++++++.+ ...|+||||+++
T Consensus        26 ~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~g  105 (353)
T 2i0e_A           26 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNG  105 (353)
T ss_dssp             EEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCCC
Confidence            689999999999999854 789999998543    23456788999999988 79999999997765 788899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc-------cc
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-------RN  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-------~~  189 (309)
                      |+|.+++..  ...+++..+..++.+++.||.||   |+.+++||||||+||+++.++.+||+|||++...       ..
T Consensus       106 g~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~L---H~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~  180 (353)
T 2i0e_A          106 GDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFL---QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKT  180 (353)
T ss_dssp             CBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCC
T ss_pred             CcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCccccc
Confidence            999999976  46799999999999999999999   7789999999999999999999999999998742       23


Q ss_pred             cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          190 YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       190 ~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ..+|+.|+|||...  ..+.++|+||||+++|+|++|+.||.+..... ....... ..      ...+...    ...+
T Consensus       181 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-~~~~i~~-~~------~~~p~~~----s~~~  248 (353)
T 2i0e_A          181 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE-LFQSIME-HN------VAYPKSM----SKEA  248 (353)
T ss_dssp             CCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH-CC------CCCCTTS----CHHH
T ss_pred             ccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHH-HHHHHHh-CC------CCCCCCC----CHHH
Confidence            46789999999643  35789999999999999999999998654322 1111111 00      1111111    2345


Q ss_pred             HHHHHHccCCCCCCCCC-----hHHHHH
Q 021659          268 LAVARLCIKTKDKPTIS-----IPQISR  290 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps-----~~evl~  290 (309)
                      .+++.+||..||++||+     +.++++
T Consensus       249 ~~li~~lL~~dP~~R~~~~~~~~~~i~~  276 (353)
T 2i0e_A          249 VAICKGLMTKHPGKRLGCGPEGERDIKE  276 (353)
T ss_dssp             HHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred             HHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence            56666999999999996     466663

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=3.1e-39  Score=303.00  Aligned_cols=237  Identities=16%  Similarity=0.186  Sum_probs=187.1

Q ss_pred             cccccccCCCceEEEEEEc-CCcEEEEEEecc---ccccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           42 FHRIVYTNSHGAAYKARFQ-DGEVALVKEIQA---LNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~---~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      +.+.||+|+||.||++... +++.||+|++..   .......+.+|++++++++||||+++++++.+ ...++||||+.+
T Consensus        26 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~  105 (486)
T 3mwu_A           26 IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTG  105 (486)
T ss_dssp             EEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             EeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCC
Confidence            3478999999999999974 688999999843   23346788999999999999999999998865 677899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeC---CCCceeEeccccccccc-----
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLD---ENFTAKLSDVGFFNSVR-----  188 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~---~~~~~kl~dfg~~~~~~-----  188 (309)
                      ++|.+.+..  ...+++..+..++.|++.||.||   |+.+|+||||||+||+++   .++.+||+|||++....     
T Consensus       106 ~~L~~~~~~--~~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~  180 (486)
T 3mwu_A          106 GELFDEIIK--RKRFSEHDAARIIKQVFSGITYM---HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM  180 (486)
T ss_dssp             CBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC---
T ss_pred             CcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCcc
Confidence            999998875  46799999999999999999999   778999999999999995   45679999999986443     


Q ss_pred             -ccCCCCCCCCCCCCCC-CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          189 -NYATMPHSSCPEDCST-QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       189 -~~~~~~~~~~PE~~~~-~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                       ...+|+.|+|||...+ ++.++|||||||++|+|++|+.||.+........ ..........  .+.     .......
T Consensus       181 ~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~-~i~~~~~~~~--~~~-----~~~~s~~  252 (486)
T 3mwu_A          181 KDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILK-RVETGKYAFD--LPQ-----WRTISDD  252 (486)
T ss_dssp             -CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-HHHHTCCCSC--SGG-----GGGSCHH
T ss_pred             CCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhCCCCCC--Ccc-----cCCCCHH
Confidence             3468899999997544 4778999999999999999999998654332211 1111000000  000     0011234


Q ss_pred             HHHHHHHccCCCCCCCCChHHHHHH
Q 021659          267 LLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      +.+++.+||+.||+.|||+.++++.
T Consensus       253 ~~~li~~~L~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          253 AKDLIRKMLTFHPSLRITATQCLEH  277 (486)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred             HHHHHHHHcCCChhhCcCHHHHhcC
Confidence            5566779999999999999999964

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=2e-39  Score=283.02  Aligned_cols=239  Identities=16%  Similarity=0.183  Sum_probs=186.5

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccccc---HHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLE---KDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~s  118 (309)
                      +.||+|+||.||+|... +++.||+|++......   .+.+.+|+.++++++||||+++++++.+ ...++||||+++++
T Consensus        12 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~   91 (284)
T 3kk8_A           12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE   91 (284)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             hhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCCC
Confidence            68999999999999974 5889999998654333   3567899999999999999999998765 67789999999999


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCc---eeEeccccccccc------c
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFT---AKLSDVGFFNSVR------N  189 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~---~kl~dfg~~~~~~------~  189 (309)
                      |.+.+..  ...+++..+..++.+++.||.||   |+.+++||||+|+||+++.++.   +||+|||++....      .
T Consensus        92 l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~  166 (284)
T 3kk8_A           92 LFEDIVA--REFYSEADASHCIQQILESIAYC---HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG  166 (284)
T ss_dssp             HHHHHHH--HSSCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBCCC
T ss_pred             HHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccccC
Confidence            9988876  46799999999999999999999   7789999999999999986655   9999999986443      2


Q ss_pred             cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          190 YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ..+++.|+|||....  .+.++||||||+++++|++|+.||.+...............   ....+.  ....   ...+
T Consensus       167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~---~~~~~~--~~~~---~~~~  238 (284)
T 3kk8_A          167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY---DYPSPE--WDTV---TPEA  238 (284)
T ss_dssp             SCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC---CCCTTT--TTTS---CHHH
T ss_pred             CCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccc---cCCchh--hccc---CHHH
Confidence            367888999997443  47889999999999999999999976543322221111110   000111  0111   2345


Q ss_pred             HHHHHHccCCCCCCCCChHHHHH--HHhhh
Q 021659          268 LAVARLCIKTKDKPTISIPQISR--YLQNE  295 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~evl~--~L~~~  295 (309)
                      .+++.+||+.||++|||+.|+++  .+.+.
T Consensus       239 ~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  268 (284)
T 3kk8_A          239 KSLIDSMLTVNPKKRITADQALKVPWICNR  268 (284)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHTTSHHHHSC
T ss_pred             HHHHHHHcccChhhCCCHHHHhcCccccCC
Confidence            56677999999999999999985  44443

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=3.3e-39  Score=280.41  Aligned_cols=234  Identities=17%  Similarity=0.204  Sum_probs=185.8

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCC
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGS  118 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~s  118 (309)
                      .+.||+|+||.||+|... +++.||+|.+....  ...+.+.+|+.+++.++||||+++++++.+ ...++||||+++++
T Consensus        12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   91 (276)
T 2yex_A           12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE   91 (276)
T ss_dssp             EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred             EEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCc
Confidence            368999999999999975 68899999985433  234678999999999999999999997764 67789999999999


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc---------cc
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV---------RN  189 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~---------~~  189 (309)
                      |.+++..  ...+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++.+||+|||.+...         ..
T Consensus        92 L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~  166 (276)
T 2yex_A           92 LFDRIEP--DIGMPEPDAQRFFHQLMAGVVYL---HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK  166 (276)
T ss_dssp             GGGGSBT--TTBCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCC
T ss_pred             HHHHHhh--ccCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcccC
Confidence            9999976  56799999999999999999999   7789999999999999999999999999998643         23


Q ss_pred             cCCCCCCCCCCCCCCC---CCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          190 YATMPHSSCPEDCSTQ---DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~~---~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                      ..+++.|.|||.....   +.++||||||+++++|++|+.||..................   ...+      .......
T Consensus       167 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~------~~~~~~~  237 (276)
T 2yex_A          167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT---YLNP------WKKIDSA  237 (276)
T ss_dssp             CCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCT---TSTT------GGGSCHH
T ss_pred             CccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhccc---ccCc------hhhcCHH
Confidence            3577889999976443   45799999999999999999999765432111111111000   0000      0011234


Q ss_pred             HHHHHHHccCCCCCCCCChHHHHH
Q 021659          267 LLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      +.+++.+||+.||++|||+.|+++
T Consensus       238 ~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          238 PLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHCCCCchhCCCHHHHhc
Confidence            556777999999999999999986

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=3.3e-39  Score=287.87  Aligned_cols=237  Identities=11%  Similarity=0.128  Sum_probs=187.0

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc---ccHHHHHHHHHHHccCC-CCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN---LEKDAFYREIQLLGRLH-HRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~---~~~~~~~~ei~~l~~l~-h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||+|... +++.||+|++....   .....+.+|+.+++++. ||||+++++++.+ ...++||||++++
T Consensus        35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~  114 (327)
T 3lm5_A           35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG  114 (327)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred             ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCC
Confidence            67999999999999974 58999999985432   23568899999999995 7999999998765 6788999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC---CCceeEeccccccccc------
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE---NFTAKLSDVGFFNSVR------  188 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~---~~~~kl~dfg~~~~~~------  188 (309)
                      +|.+++.......+++..++.++.|++.||.||   |+.+++||||||+||+++.   ++.+||+|||++....      
T Consensus       115 ~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~L---H~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~  191 (327)
T 3lm5_A          115 EIFSLCLPELAEMVSENDVIRLIKQILEGVYYL---HQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELR  191 (327)
T ss_dssp             EGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-------
T ss_pred             cHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCccccc
Confidence            999999765567899999999999999999999   7789999999999999988   7899999999987543      


Q ss_pred             ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          189 NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       189 ~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                      ...+++.|+|||...  ..+.++||||||+++|+|++|+.||...................    .+..    .......
T Consensus       192 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~----~~~~----~~~~~~~  263 (327)
T 3lm5_A          192 EIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDY----SEET----FSSVSQL  263 (327)
T ss_dssp             --CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC----CTTT----TTTSCHH
T ss_pred             cccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhccccc----Cchh----hcccCHH
Confidence            235788999999744  34788999999999999999999998765433322211111110    0111    1111244


Q ss_pred             HHHHHHHccCCCCCCCCChHHHHHH
Q 021659          267 LLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      +.+++.+||+.||++|||+.++++.
T Consensus       264 ~~~li~~~L~~dP~~Rpt~~~ll~h  288 (327)
T 3lm5_A          264 ATDFIQSLLVKNPEKRPTAEICLSH  288 (327)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred             HHHHHHHHcCCChhhCcCHHHHhCC
Confidence            5667779999999999999999853

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=6.8e-40  Score=299.18  Aligned_cols=227  Identities=18%  Similarity=0.257  Sum_probs=178.8

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccccc----HHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLE----KDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~----~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||+++.. +++.||+|++......    .+.+..|..++.++ +||||+++++++.+ ...|+||||+++
T Consensus        58 ~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~g  137 (396)
T 4dc2_A           58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG  137 (396)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCCC
Confidence            58999999999999975 5789999999643322    23578899999887 89999999997765 678899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc-------cc
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-------RN  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-------~~  189 (309)
                      |+|..++..  ...+++..+..++.+++.||.||   |+.+|+||||||+||+++.++.+||+|||+++..       ..
T Consensus       138 g~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~L---H~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~  212 (396)
T 4dc2_A          138 GDLMFHMQR--QRKLPEEHARFYSAEISLALNYL---HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST  212 (396)
T ss_dssp             CBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCC
T ss_pred             CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCEEeccCCHHHEEECCCCCEEEeecceeeecccCCCcccc
Confidence            999999976  56799999999999999999999   7789999999999999999999999999998742       23


Q ss_pred             cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCcc-------HHHHHHHhcccccccccccCcCCCCCC
Q 021659          190 YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVD-------LIQWIQESSISSSIHRMIDPDLGGSYD  260 (309)
Q Consensus       190 ~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~~~~  260 (309)
                      ..+|+.|+|||...  .++.++|+|||||++|+|++|+.||.....       ....+.......      ....+... 
T Consensus       213 ~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~------~~~~p~~~-  285 (396)
T 4dc2_A          213 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK------QIRIPRSL-  285 (396)
T ss_dssp             CCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHC------CCCCCTTS-
T ss_pred             ccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcc------ccCCCCcC-
Confidence            46889999999754  347899999999999999999999963211       011111111111      01111122 


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCCCh
Q 021659          261 SKELKKLLAVARLCIKTKDKPTISI  285 (309)
Q Consensus       261 ~~~~~~l~~l~~~cl~~dp~~Rps~  285 (309)
                         ...+.+++.+||+.||++||++
T Consensus       286 ---s~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          286 ---SVKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             ---CHHHHHHHHHHTCSCTTTSTTC
T ss_pred             ---CHHHHHHHHHHhcCCHhHcCCC
Confidence               2345566669999999999996

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=1.6e-39  Score=304.73  Aligned_cols=235  Identities=18%  Similarity=0.217  Sum_probs=187.3

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEeccc----cccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQAL----NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~----~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      .+.||+|+||.||++... +++.||+|++...    ....+.+.+|+.++++++||||+++++++.+ ...++||||+.+
T Consensus        31 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~  110 (484)
T 3nyv_A           31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG  110 (484)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             eeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCC
Confidence            368999999999999975 6899999998532    3346789999999999999999999998765 678899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceee---CCCCceeEeccccccccc-----
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIML---DENFTAKLSDVGFFNSVR-----  188 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill---~~~~~~kl~dfg~~~~~~-----  188 (309)
                      ++|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||++   +.++.+||+|||++....     
T Consensus       111 ~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~  185 (484)
T 3nyv_A          111 GELFDEIIS--RKRFSEVDAARIIRQVLSGITYM---HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM  185 (484)
T ss_dssp             CBHHHHHHT--CSCCBHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCSH
T ss_pred             CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccccc
Confidence            999999976  57799999999999999999999   77799999999999999   567899999999986543     


Q ss_pred             -ccCCCCCCCCCCCCC-CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          189 -NYATMPHSSCPEDCS-TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       189 -~~~~~~~~~~PE~~~-~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                       ...+|+.|+|||... .++.++||||||+++|+|++|..||.+......... .........  .+.     .......
T Consensus       186 ~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~-i~~~~~~~~--~~~-----~~~~s~~  257 (484)
T 3nyv_A          186 KDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKK-VEKGKYTFE--LPQ-----WKKVSES  257 (484)
T ss_dssp             HHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH-HHHCCCCCC--SGG-----GGGSCHH
T ss_pred             ccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHH-HHcCCCCCC--Ccc-----cccCCHH
Confidence             236889999999643 357889999999999999999999987543322111 111100000  000     0011244


Q ss_pred             HHHHHHHccCCCCCCCCChHHHHH
Q 021659          267 LLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      +.+++.+||+.||++|||+.|+++
T Consensus       258 ~~~li~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          258 AKDLIRKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHCCCChhHCcCHHHHhh
Confidence            556677999999999999999984

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=3.5e-39  Score=303.23  Aligned_cols=234  Identities=16%  Similarity=0.215  Sum_probs=181.4

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccc---cccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQAL---NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~---~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~s  118 (309)
                      +.||+|+||.||+|... ++..||+|++...   ......+.+|+.+++.++||||+++++++.+ ...++||||+++|+
T Consensus        43 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~  122 (494)
T 3lij_A           43 KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGE  122 (494)
T ss_dssp             EEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCB
T ss_pred             eEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCc
Confidence            68999999999999974 6789999998543   2335678999999999999999999998865 67889999999999


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC---CceeEeccccccccc------c
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN---FTAKLSDVGFFNSVR------N  189 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~---~~~kl~dfg~~~~~~------~  189 (309)
                      |.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++..   +.+||+|||++....      .
T Consensus       123 L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~~~  197 (494)
T 3lij_A          123 LFDEIIH--RMKFNEVDAAVIIKQVLSGVTYL---HKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKE  197 (494)
T ss_dssp             HHHHHHH--HSSCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCBCC
T ss_pred             HHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCccccc
Confidence            9998875  46799999999999999999999   77899999999999999764   559999999986543      3


Q ss_pred             cCCCCCCCCCCCCCC-CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHH
Q 021659          190 YATMPHSSCPEDCST-QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL  268 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~-~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~  268 (309)
                      ..+|+.|+|||.... ++.++|||||||++|+|++|..||.+....... ..... +.. ....+.. ...    ...+.
T Consensus       198 ~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-~~i~~-~~~-~~~~~~~-~~~----s~~~~  269 (494)
T 3lij_A          198 RLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEIL-RKVEK-GKY-TFDSPEW-KNV----SEGAK  269 (494)
T ss_dssp             CCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-HHHHH-TCC-CCCSGGG-TTS----CHHHH
T ss_pred             cCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHh-CCC-CCCchhc-ccC----CHHHH
Confidence            468899999997443 578899999999999999999999865432211 11111 000 0001110 111    23455


Q ss_pred             HHHHHccCCCCCCCCChHHHHH
Q 021659          269 AVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       269 ~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      +++.+||+.||++|||+.|+++
T Consensus       270 ~li~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          270 DLIKQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHCCCChhhCccHHHHhc
Confidence            6667999999999999999984

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=2.9e-39  Score=304.51  Aligned_cols=234  Identities=17%  Similarity=0.186  Sum_probs=182.8

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc--------------ccHHHHHHHHHHHccCCCCCcceEeeeEeC-Cee
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN--------------LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKR  107 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~--------------~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~  107 (309)
                      +.||+|+||.||+|... ++..||+|++....              ...+.+.+|+.++++++||||+++++++.+ ...
T Consensus        42 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  121 (504)
T 3q5i_A           42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYF  121 (504)
T ss_dssp             EEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             eEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence            58999999999999974 57899999985432              234678899999999999999999998765 678


Q ss_pred             EEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCC---ceeEeccccc
Q 021659          108 LLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENF---TAKLSDVGFF  184 (309)
Q Consensus       108 ~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~---~~kl~dfg~~  184 (309)
                      ++||||+++|+|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++   .+||+|||++
T Consensus       122 ~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a  196 (504)
T 3q5i_A          122 YLVTEFYEGGELFEQIIN--RHKFDECDAANIMKQILSGICYL---HKHNIVHRDIKPENILLENKNSLLNIKIVDFGLS  196 (504)
T ss_dssp             EEEEECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEESSTTCCSSEEECCCTTC
T ss_pred             EEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEeCCCcHHHEEEecCCCCccEEEEECCCC
Confidence            899999999999999876  46799999999999999999999   778999999999999998775   6999999998


Q ss_pred             cccc------ccCCCCCCCCCCCCCC-CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCC
Q 021659          185 NSVR------NYATMPHSSCPEDCST-QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGG  257 (309)
Q Consensus       185 ~~~~------~~~~~~~~~~PE~~~~-~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  257 (309)
                      ....      ...+|+.|+|||.... ++.++||||||+++|+|++|..||.+...... ...........   +.....
T Consensus       197 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~---~~~~~~  272 (504)
T 3q5i_A          197 SFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDI-IKKVEKGKYYF---DFNDWK  272 (504)
T ss_dssp             EECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCCCC---CHHHHT
T ss_pred             EEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHcCCCCC---CccccC
Confidence            6543      3468899999997443 57889999999999999999999986543221 11111110000   000000


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          258 SYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       258 ~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ..    ...+.+++.+||++||++|||+.|+++
T Consensus       273 ~~----s~~~~~li~~~L~~dp~~R~t~~e~l~  301 (504)
T 3q5i_A          273 NI----SDEAKELIKLMLTYDYNKRCTAEEALN  301 (504)
T ss_dssp             TS----CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CC----CHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            11    245566777999999999999999984

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=5.1e-40  Score=303.65  Aligned_cols=246  Identities=16%  Similarity=0.174  Sum_probs=189.7

Q ss_pred             HHHHhhcccc--cccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-C
Q 021659           34 DIKMATDGFH--RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-R  105 (309)
Q Consensus        34 ~i~~~~~~~~--~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~  105 (309)
                      ++....++|.  +.||+|+||.||+|+.. +++.||+|++....    ...+.+.+|+.++..++||||+++++++.+ .
T Consensus        68 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~  147 (437)
T 4aw2_A           68 QMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDN  147 (437)
T ss_dssp             HHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSS
T ss_pred             cccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC
Confidence            3334445565  58999999999999985 47899999985422    122348899999999999999999997765 7


Q ss_pred             eeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccc
Q 021659          106 KRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFN  185 (309)
Q Consensus       106 ~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~  185 (309)
                      ..|+||||+++|+|.+++... ...+++..+..++.+++.||.||   |+.+|+||||||+|||++.++.+||+|||++.
T Consensus       148 ~~~lV~Ey~~gg~L~~~l~~~-~~~l~e~~~~~~~~qi~~aL~~L---H~~giiHrDLKp~NILl~~~g~vkL~DFGla~  223 (437)
T 4aw2_A          148 NLYLVMDYYVGGDLLTLLSKF-EDRLPEEMARFYLAEMVIAIDSV---HQLHYVHRDIKPDNILMDMNGHIRLADFGSCL  223 (437)
T ss_dssp             EEEEEECCCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             EEEEEEecCCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHH---HhCCeEecccCHHHeeEcCCCCEEEcchhhhh
Confidence            788999999999999999752 36799999999999999999999   77899999999999999999999999999986


Q ss_pred             ccc--------ccCCCCCCCCCCCCC-------CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccccccc
Q 021659          186 SVR--------NYATMPHSSCPEDCS-------TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRM  250 (309)
Q Consensus       186 ~~~--------~~~~~~~~~~PE~~~-------~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~  250 (309)
                      ...        ...+|+.|+|||...       .++.++|||||||++|||++|+.||.+................   .
T Consensus       224 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~---~  300 (437)
T 4aw2_A          224 KLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKER---F  300 (437)
T ss_dssp             ECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH---C
T ss_pred             hcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhcccc---c
Confidence            432        246899999999643       3478999999999999999999999875433222221111000   0


Q ss_pred             ccCcCCCCCCHHHHHHHHHHHHHccCCCCCC--CCChHHHHH
Q 021659          251 IDPDLGGSYDSKELKKLLAVARLCIKTKDKP--TISIPQISR  290 (309)
Q Consensus       251 ~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~--Rps~~evl~  290 (309)
                      .-|...... +   ..+.+++.+||..+|++  ||++.|+++
T Consensus       301 ~~p~~~~~~-s---~~~~dLi~~lL~~~~~r~~r~~~~eil~  338 (437)
T 4aw2_A          301 QFPTQVTDV-S---ENAKDLIRRLICSREHRLGQNGIEDFKK  338 (437)
T ss_dssp             CCCSSCCCS-C---HHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred             cCCcccccC-C---HHHHHHHHHHhcccccccCCCCHHHHhC
Confidence            011111111 2   34455666999988888  999999985

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=7.3e-41  Score=298.37  Aligned_cols=253  Identities=17%  Similarity=0.229  Sum_probs=188.3

Q ss_pred             ccccccCCCceEEEEEE-----cCCcEEEEEEeccccc-cHHHHHHHHHHHccCCCCCcceEeeeEe---CCeeEEEEee
Q 021659           43 HRIVYTNSHGAAYKARF-----QDGEVALVKEIQALNL-EKDAFYREIQLLGRLHHRHLLALQGFST---GRKRLLVFDN  113 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-----~~~~~va~K~~~~~~~-~~~~~~~ei~~l~~l~h~niv~~~~~~~---~~~~~lv~e~  113 (309)
                      .+.||+|+||.||++++     .+++.||+|.+..... ..+.+.+|++++++++||||+++++++.   ....++||||
T Consensus        28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~  107 (327)
T 3lxl_A           28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEY  107 (327)
T ss_dssp             EEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEEC
T ss_pred             hhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEee
Confidence            36899999999999984     4678999999865433 3456899999999999999999999764   3567899999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-----
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-----  188 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-----  188 (309)
                      +++++|.+++... ...+++..++.++.+++.||.||   |+.+++||||||+||+++.++.+||+|||++....     
T Consensus       108 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~  183 (327)
T 3lxl_A          108 LPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY  183 (327)
T ss_dssp             CTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSE
T ss_pred             cCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCChhhEEECCCCCEEEcccccceecccCCcc
Confidence            9999999998642 24699999999999999999999   77899999999999999999999999999987543     


Q ss_pred             -----ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcc----cccccccccCcCCC
Q 021659          189 -----NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSI----SSSIHRMIDPDLGG  257 (309)
Q Consensus       189 -----~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~  257 (309)
                           ...++..|+|||...+  .++++||||||+++++|++|..||...............    .......+......
T Consensus       184 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (327)
T 3lxl_A          184 YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRL  263 (327)
T ss_dssp             EECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCC
T ss_pred             ceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCC
Confidence                 2235566999996533  377899999999999999999998653221100000000    00000001111111


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccc
Q 021659          258 SYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQ  299 (309)
Q Consensus       258 ~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~  299 (309)
                      .........+.+++.+||+.||++|||+.|+++.|+.+....
T Consensus       264 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~  305 (327)
T 3lxl_A          264 PAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS  305 (327)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred             CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence            111122345667777999999999999999999999776533

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4e-40  Score=299.04  Aligned_cols=240  Identities=19%  Similarity=0.275  Sum_probs=181.4

Q ss_pred             cccccCCCceEEEEEEc--CC--cEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeC--CeeEEEEeeCC
Q 021659           44 RIVYTNSHGAAYKARFQ--DG--EVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTG--RKRLLVFDNIE  115 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~--~~--~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~--~~~~lv~e~~~  115 (309)
                      +.||+|+||.||+|.+.  ++  ..||+|.+....  ...+.+.+|+.++++++||||+++++++..  ...++||||++
T Consensus        95 ~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~  174 (373)
T 3c1x_A           95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK  174 (373)
T ss_dssp             EEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECCT
T ss_pred             cEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECCC
Confidence            57999999999999863  22  468999885432  234678999999999999999999997643  56789999999


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------  188 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------  188 (309)
                      +++|.+++... ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....       
T Consensus       175 ~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~  250 (373)
T 3c1x_A          175 HGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV  250 (373)
T ss_dssp             TCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTCCEEECCC--------------
T ss_pred             CCCHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHH---HHCCEecCccchheEEECCCCCEEEeeccccccccccccccc
Confidence            99999999753 35688999999999999999999   77899999999999999999999999999986432       


Q ss_pred             ----ccCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCcc--HHHHHHHhcccccccccccCcCCCCC
Q 021659          189 ----NYATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVD--LIQWIQESSISSSIHRMIDPDLGGSY  259 (309)
Q Consensus       189 ----~~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~  259 (309)
                          ...+++.|+|||..  ...++++||||||+++|+|++ |.+||.....  ....+...    .  .   ...+.. 
T Consensus       251 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~----~--~---~~~p~~-  320 (373)
T 3c1x_A          251 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG----R--R---LLQPEY-  320 (373)
T ss_dssp             -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTT----C--C---CCCCTT-
T ss_pred             cccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcC----C--C---CCCCCC-
Confidence                12344579999964  335788999999999999999 6777765322  22222111    0  0   011111 


Q ss_pred             CHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcccc
Q 021659          260 DSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQC  300 (309)
Q Consensus       260 ~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~  300 (309)
                      .   ...+.+++.+||+.||++|||+.|+++.|+.+...-.
T Consensus       321 ~---~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~  358 (373)
T 3c1x_A          321 C---PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  358 (373)
T ss_dssp             C---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred             C---CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence            1   2345667779999999999999999999998776543

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=9.8e-40  Score=285.25  Aligned_cols=234  Identities=15%  Similarity=0.192  Sum_probs=187.7

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccc----cccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQAL----NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~----~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||+|... ++..||+|.+...    ....+.+.+|++++++++||||+++++++.+ ...++||||++++
T Consensus        20 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   99 (284)
T 2vgo_A           20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRG   99 (284)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTE
T ss_pred             heecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCCC
Confidence            68999999999999975 5788999998533    2234678999999999999999999998765 6778999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-----ccCC
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-----NYAT  192 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-----~~~~  192 (309)
                      +|.+++..  ...+++..+..++.+++.||.||   |+.+++||||+|+||+++.++.+||+|||++....     ...+
T Consensus       100 ~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  174 (284)
T 2vgo_A          100 ELYKELQK--HGRFDEQRSATFMEELADALHYC---HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMCG  174 (284)
T ss_dssp             EHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBCCCCS
T ss_pred             cHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCceecCCCHHHEEEcCCCCEEEecccccccCcccccccccC
Confidence            99999976  45799999999999999999999   78899999999999999999999999999885433     3457


Q ss_pred             CCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          193 MPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       193 ~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      ++.|+|||...+  .+.++||||||+++++|++|+.||...............        +...+...    ...+.++
T Consensus       175 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~--------~~~~~~~~----~~~~~~l  242 (284)
T 2vgo_A          175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV--------DLKFPPFL----SDGSKDL  242 (284)
T ss_dssp             CGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT--------CCCCCTTS----CHHHHHH
T ss_pred             CCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhcc--------ccCCCCcC----CHHHHHH
Confidence            788999996443  478999999999999999999999865433222111111        11111111    2345566


Q ss_pred             HHHccCCCCCCCCChHHHHH--HHhh
Q 021659          271 ARLCIKTKDKPTISIPQISR--YLQN  294 (309)
Q Consensus       271 ~~~cl~~dp~~Rps~~evl~--~L~~  294 (309)
                      +.+||+.||++|||+.++++  .++.
T Consensus       243 i~~~l~~~p~~Rps~~~ll~h~~~~~  268 (284)
T 2vgo_A          243 ISKLLRYHPPQRLPLKGVMEHPWVKA  268 (284)
T ss_dssp             HHHHSCSSGGGSCCHHHHHTCHHHHH
T ss_pred             HHHHhhcCHhhCCCHHHHhhCHHHHh
Confidence            67999999999999999985  4443

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=1.1e-39  Score=293.13  Aligned_cols=227  Identities=18%  Similarity=0.259  Sum_probs=179.0

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccc----cHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL----EKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~----~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||+++.. +++.||+|++.....    ..+.+.+|+.+++++ +||||+++++++.+ ...|+||||+++
T Consensus        15 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~g   94 (345)
T 3a8x_A           15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   94 (345)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             EEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCCC
Confidence            68999999999999974 588999999964332    234578899999988 89999999997765 778899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc-------cc
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-------RN  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-------~~  189 (309)
                      |+|.+++..  ...+++..+..++.+++.||.||   |+.+++||||||+||+++.++.+||+|||+++..       ..
T Consensus        95 g~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~~~~  169 (345)
T 3a8x_A           95 GDLMFHMQR--QRKLPEEHARFYSAEISLALNYL---HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST  169 (345)
T ss_dssp             CBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCCBCC
T ss_pred             CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCceecCCCHHHEEECCCCCEEEEeccccccccCCCCcccc
Confidence            999999976  46799999999999999999999   7789999999999999999999999999998742       23


Q ss_pred             cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCcc-------HHHHHHHhcccccccccccCcCCCCCC
Q 021659          190 YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVD-------LIQWIQESSISSSIHRMIDPDLGGSYD  260 (309)
Q Consensus       190 ~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~~~~  260 (309)
                      ..+|+.|+|||...  ..+.++|+|||||++|+|++|+.||.....       .............      ..++... 
T Consensus       170 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~------~~~p~~~-  242 (345)
T 3a8x_A          170 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ------IRIPRSL-  242 (345)
T ss_dssp             CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCC------CCCCTTS-
T ss_pred             cCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCC------CCCCCCC-
Confidence            46789999999644  347889999999999999999999964211       0111111111110      1111122 


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCCCh
Q 021659          261 SKELKKLLAVARLCIKTKDKPTISI  285 (309)
Q Consensus       261 ~~~~~~l~~l~~~cl~~dp~~Rps~  285 (309)
                         ...+.+++.+||+.||++||++
T Consensus       243 ---s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          243 ---SVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             ---CHHHHHHHHHHTCSSTTTSTTC
T ss_pred             ---CHHHHHHHHHHhcCCHhHCCCC
Confidence               2345566669999999999996

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=3.4e-39  Score=292.17  Aligned_cols=234  Identities=18%  Similarity=0.252  Sum_probs=185.0

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccccc---------HHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEE
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLE---------KDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVF  111 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~---------~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~  111 (309)
                      +.||+|++|.||+|... +|+.||+|++......         .+.+.+|+.+++++ +||||+++++++.. ...++||
T Consensus       100 ~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~  179 (365)
T 2y7j_A          100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVF  179 (365)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEE
T ss_pred             eEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEE
Confidence            58999999999999985 6899999998543211         34678999999999 79999999998764 6788999


Q ss_pred             eeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---
Q 021659          112 DNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---  188 (309)
Q Consensus       112 e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---  188 (309)
                      ||+++++|.+++..  ...+++..+..++.|++.||.||   |+.|++|+||||.||+++.++.+||+|||++....   
T Consensus       180 e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~L---H~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~  254 (365)
T 2y7j_A          180 DLMRKGELFDYLTE--KVALSEKETRSIMRSLLEAVSFL---HANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE  254 (365)
T ss_dssp             CCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC
T ss_pred             EeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEECCCCCEEEEecCcccccCCCc
Confidence            99999999999975  46799999999999999999999   67799999999999999999999999999886443   


Q ss_pred             ---ccCCCCCCCCCCCCC--------CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCC
Q 021659          189 ---NYATMPHSSCPEDCS--------TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGG  257 (309)
Q Consensus       189 ---~~~~~~~~~~PE~~~--------~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  257 (309)
                         ...+|+.|+|||...        ..+.++||||||+++|+|++|..||..................   ...+.. .
T Consensus       255 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~---~~~~~~-~  330 (365)
T 2y7j_A          255 KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQ---FSSPEW-D  330 (365)
T ss_dssp             CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC---CCHHHH-S
T ss_pred             ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC---CCCccc-c
Confidence               346788999999642        3578999999999999999999999765432221111110000   000000 0


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          258 SYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       258 ~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .    ....+.+++.+||+.||++|||+.++++
T Consensus       331 ~----~~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          331 D----RSSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             S----SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             c----CCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            1    1234666777999999999999999986

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.2e-39  Score=288.19  Aligned_cols=242  Identities=18%  Similarity=0.211  Sum_probs=184.3

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccccc---HHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLE---KDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~s  118 (309)
                      +.||+|+||.||+|... +++.||+|++......   .+.+.+|++++++++||||+++++++.+ ...++||||+++++
T Consensus         9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   88 (311)
T 4agu_A            9 GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTV   88 (311)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEH
T ss_pred             eEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCch
Confidence            68999999999999974 4889999988544333   3567899999999999999999997754 67889999999999


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccC
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYA  191 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~  191 (309)
                      |.+++..  ...+++..+..++.+++.||.||   |+.+++||||||+||+++.++.+||+|||++....       ...
T Consensus        89 l~~~~~~--~~~~~~~~~~~i~~~l~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  163 (311)
T 4agu_A           89 LHELDRY--QRGVPEHLVKSITWQTLQAVNFC---HKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV  163 (311)
T ss_dssp             HHHHHHT--SSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC----------
T ss_pred             HHHHHhh--hcCCCHHHHHHHHHHHHHHHHHH---HHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccCCCc
Confidence            9998876  56799999999999999999999   77899999999999999999999999999986543       235


Q ss_pred             CCCCCCCCCCC---CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccc--------------cccccccCc
Q 021659          192 TMPHSSCPEDC---STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISS--------------SIHRMIDPD  254 (309)
Q Consensus       192 ~~~~~~~PE~~---~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~  254 (309)
                      +++.|+|||..   ...+.++||||||+++++|++|+.||.+..............+              .......+.
T Consensus       164 ~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (311)
T 4agu_A          164 ATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPD  243 (311)
T ss_dssp             --GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCC
T ss_pred             CCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCC
Confidence            77889999964   3347899999999999999999999987654332221110000              000000000


Q ss_pred             CCCCCC-----HHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          255 LGGSYD-----SKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       255 l~~~~~-----~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ......     ......+.+++.+||+.||++|||+.|+++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  284 (311)
T 4agu_A          244 PEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH  284 (311)
T ss_dssp             CSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred             ccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            000000     111345667777999999999999999984

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=2.4e-39  Score=296.52  Aligned_cols=231  Identities=18%  Similarity=0.249  Sum_probs=176.5

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccccHHHHHHHHHHHccC-CCCCcceEeeeEe-----CCeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLEKDAFYREIQLLGRL-HHRHLLALQGFST-----GRKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~-----~~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||++... +++.||+|++..    ...+.+|++++.++ +||||+++++++.     ....|+||||+++
T Consensus        68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~g  143 (400)
T 1nxk_A           68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG  143 (400)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCS
T ss_pred             ceeeeccCeEEEEEEECCCCCEEEEEEeCc----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCC
Confidence            46999999999999974 588999999853    24577888887554 7999999999664     2457899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC---CCceeEeccccccccc-----
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE---NFTAKLSDVGFFNSVR-----  188 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~---~~~~kl~dfg~~~~~~-----  188 (309)
                      |+|.+++.......+++..+..++.|++.||.||   |+.+|+||||||+||+++.   ++.+||+|||++....     
T Consensus       144 g~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~  220 (400)
T 1nxk_A          144 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL---HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL  220 (400)
T ss_dssp             EEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----
T ss_pred             CcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCcCcceEEEecCCCCccEEEEecccccccCCCCcc
Confidence            9999999875556799999999999999999999   6789999999999999997   7889999999987543     


Q ss_pred             -ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCcc------HHHHHHHhcccccccccccCcCCCCC
Q 021659          189 -NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVD------LIQWIQESSISSSIHRMIDPDLGGSY  259 (309)
Q Consensus       189 -~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~  259 (309)
                       ...+|+.|+|||....  ++.++|||||||++|+|++|+.||.+...      ....+.....     ..  +...   
T Consensus       221 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~-----~~--~~~~---  290 (400)
T 1nxk_A          221 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY-----EF--PNPE---  290 (400)
T ss_dssp             ------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCC-----CC--CTTT---
T ss_pred             ccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcc-----cC--CCcc---
Confidence             3457889999997543  47889999999999999999999975432      1122211100     00  1000   


Q ss_pred             CHHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          260 DSKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       260 ~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      .......+.+++.+||+.||++|||+.|+++.
T Consensus       291 ~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          291 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  322 (400)
T ss_dssp             TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             cccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            01112445666779999999999999999964

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=1.7e-39  Score=287.60  Aligned_cols=240  Identities=17%  Similarity=0.236  Sum_probs=181.7

Q ss_pred             cccccCCCceEEEEEEc----CCcEEEEEEecccccc---HHHHHHHHHHHccCCCCCcceEeeeEeC-C-----eeEEE
Q 021659           44 RIVYTNSHGAAYKARFQ----DGEVALVKEIQALNLE---KDAFYREIQLLGRLHHRHLLALQGFSTG-R-----KRLLV  110 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~----~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~h~niv~~~~~~~~-~-----~~~lv  110 (309)
                      +.||+|+||.||+|...    .+..||+|.+......   .+.+.+|+.++++++||||+++++++.. .     ..++|
T Consensus        40 ~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v  119 (313)
T 3brb_A           40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVI  119 (313)
T ss_dssp             EEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEEE
T ss_pred             cceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEEE
Confidence            47999999999999863    3457999998644332   3568899999999999999999998754 2     34899


Q ss_pred             EeeCCCCCHHHhhcC----CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccc
Q 021659          111 FDNIENGSLKEHLND----PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNS  186 (309)
Q Consensus       111 ~e~~~~~sL~~~i~~----~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~  186 (309)
                      |||+++++|.+++..    .....+++..++.++.+++.||.||   |+.+++||||||+||+++.++.+||+|||++..
T Consensus       120 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~  196 (313)
T 3brb_A          120 LPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKK  196 (313)
T ss_dssp             EECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHH---HTTTCCCCCCSGGGEEECTTSCEEECSCSCC--
T ss_pred             EecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCcceEEEcCCCcEEEeecCccee
Confidence            999999999999832    2246799999999999999999999   788999999999999999999999999999864


Q ss_pred             ccc---------cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCc
Q 021659          187 VRN---------YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPD  254 (309)
Q Consensus       187 ~~~---------~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (309)
                      ...         ..+++.|.|||....  .++++||||||+++|+|++ |..||........... ... +.     .+.
T Consensus       197 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~-~~~-~~-----~~~  269 (313)
T 3brb_A          197 IYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDY-LLH-GH-----RLK  269 (313)
T ss_dssp             --------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH-HHT-TC-----CCC
T ss_pred             cccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHH-HHc-CC-----CCC
Confidence            421         234567999997433  4778999999999999999 8899876433211111 100 00     011


Q ss_pred             CCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          255 LGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       255 l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                      .....    ...+.+++.+||..||++|||+.++++.|+++.+
T Consensus       270 ~~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~  308 (313)
T 3brb_A          270 QPEDC----LDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE  308 (313)
T ss_dssp             CBTTC----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCccc----cHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            11111    2456677779999999999999999999998765

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=9.7e-40  Score=293.87  Aligned_cols=233  Identities=21%  Similarity=0.260  Sum_probs=184.1

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccccc----HHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLE----KDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~----~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||+|+. .+++.||+|++......    .+.+.+|++++++++||||+++++++. +...++||||+. |
T Consensus        60 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~-g  138 (348)
T 1u5q_A           60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-G  138 (348)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred             eEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC-C
Confidence            5799999999999996 56899999998543222    246889999999999999999999775 477889999998 4


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---ccCCCC
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---NYATMP  194 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---~~~~~~  194 (309)
                      +|.+++... ...+++..+..++.+++.||.||   |+.+++||||||+||+++.++.+||+|||++....   ...+|+
T Consensus       139 ~l~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~gt~  214 (348)
T 1u5q_A          139 SASDLLEVH-KKPLQEVEIAAVTHGALQGLAYL---HSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTP  214 (348)
T ss_dssp             EHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCSCG
T ss_pred             CHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCCCcccCCc
Confidence            888877532 46799999999999999999999   77799999999999999999999999999987543   346788


Q ss_pred             CCCCCCCC-----CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHH
Q 021659          195 HSSCPEDC-----STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLA  269 (309)
Q Consensus       195 ~~~~PE~~-----~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~  269 (309)
                      .|+|||..     ...+.++||||||+++++|++|+.||.+........... .. .     .+.......+   ..+.+
T Consensus       215 ~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~-~~-~-----~~~~~~~~~~---~~l~~  284 (348)
T 1u5q_A          215 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA-QN-E-----SPALQSGHWS---EYFRN  284 (348)
T ss_dssp             GGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH-HS-C-----CCCCCCTTSC---HHHHH
T ss_pred             ceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH-hc-C-----CCCCCCCCCC---HHHHH
Confidence            99999964     334788999999999999999999997654433222111 11 1     1111111222   34556


Q ss_pred             HHHHccCCCCCCCCChHHHHHH
Q 021659          270 VARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       270 l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      ++.+||+.||++|||+.++++.
T Consensus       285 li~~~l~~dP~~Rps~~~ll~h  306 (348)
T 1u5q_A          285 FVDSCLQKIPQDRPTSEVLLKH  306 (348)
T ss_dssp             HHHHHTCSSGGGSCCHHHHTTC
T ss_pred             HHHHHcccChhhCcCHHHHhhC
Confidence            6669999999999999999853

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=9.6e-40  Score=298.00  Aligned_cols=241  Identities=19%  Similarity=0.251  Sum_probs=176.3

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc---ccHHHHHHHHHHHccCC-CCCcceEeeeEeC---CeeEEEEeeCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN---LEKDAFYREIQLLGRLH-HRHLLALQGFSTG---RKRLLVFDNIE  115 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~---~~~~~~~~ei~~l~~l~-h~niv~~~~~~~~---~~~~lv~e~~~  115 (309)
                      +.||+|+||.||+|.. .+++.||+|++....   ...+.+.+|+.+++++. ||||+++++++..   ...|+||||++
T Consensus        15 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~   94 (388)
T 3oz6_A           15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYME   94 (388)
T ss_dssp             EC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCS
T ss_pred             EEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccC
Confidence            6899999999999997 468999999985432   23456789999999997 9999999998753   36789999998


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------  188 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------  188 (309)
                      + +|.+++..   ..+++..+..++.|++.||.||   |+.+|+||||||+||+++.++.+||+|||+++...       
T Consensus        95 ~-~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~L---H~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  167 (388)
T 3oz6_A           95 T-DLHAVIRA---NILEPVHKQYVVYQLIKVIKYL---HSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTN  167 (388)
T ss_dssp             E-EHHHHHHH---TCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCC
T ss_pred             c-CHHHHHHc---CCCCHHHHHHHHHHHHHHHHHH---HhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccccccc
Confidence            5 99999875   5799999999999999999999   77899999999999999999999999999986432       


Q ss_pred             ---------------------ccCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccc
Q 021659          189 ---------------------NYATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSIS  244 (309)
Q Consensus       189 ---------------------~~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~  244 (309)
                                           ...+|+.|+|||...   .++.++|||||||++++|++|+.||.+.....+........
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~  247 (388)
T 3oz6_A          168 NIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVI  247 (388)
T ss_dssp             CGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence                                 236788899999643   35788999999999999999999998765443332211000


Q ss_pred             c--c---ccccccC-----------------cCCCCCCH-------------HHHHHHHHHHHHccCCCCCCCCChHHHH
Q 021659          245 S--S---IHRMIDP-----------------DLGGSYDS-------------KELKKLLAVARLCIKTKDKPTISIPQIS  289 (309)
Q Consensus       245 ~--~---~~~~~~~-----------------~l~~~~~~-------------~~~~~l~~l~~~cl~~dp~~Rps~~evl  289 (309)
                      +  .   ...+..+                 ........             .....+.+++.+||+.||++|||+.|++
T Consensus       248 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l  327 (388)
T 3oz6_A          248 DFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDAL  327 (388)
T ss_dssp             CCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHT
T ss_pred             CCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHh
Confidence            0  0   0000000                 00000000             1123566777799999999999999998


Q ss_pred             HH
Q 021659          290 RY  291 (309)
Q Consensus       290 ~~  291 (309)
                      +.
T Consensus       328 ~H  329 (388)
T 3oz6_A          328 KH  329 (388)
T ss_dssp             TS
T ss_pred             CC
Confidence            65

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=5.2e-40  Score=305.10  Aligned_cols=230  Identities=17%  Similarity=0.181  Sum_probs=177.5

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccc----cccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQAL----NLEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~----~~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||++.. .+++.||+|++...    ......+.+|+.++++++||||+++++++. ....++||||++++
T Consensus       154 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~~  233 (446)
T 4ejn_A          154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG  233 (446)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSSC
T ss_pred             EEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCCC
Confidence            5899999999999997 46889999998543    223356788999999999999999999775 47788999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCC-CCeeecccCCCceeeCCCCceeEecccccccc-------cc
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSN-LPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-------RN  189 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~-~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-------~~  189 (309)
                      +|.+++..  ...+++..+..++.|++.||.||   |+ .+|+||||||+||+++.++.+||+|||++...       ..
T Consensus       234 ~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~L---H~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  308 (446)
T 4ejn_A          234 ELFFHLSR--ERVFSEDRARFYGAEIVSALDYL---HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT  308 (446)
T ss_dssp             BHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHH---HHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----CC
T ss_pred             cHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---hhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCccccc
Confidence            99999976  56799999999999999999999   55 79999999999999999999999999998643       23


Q ss_pred             cCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          190 YATMPHSSCPEDC--STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       190 ~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ..+|+.|+|||..  ..++.++|||||||++|+|++|+.||.+..............        ...+...    ...+
T Consensus       309 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~--------~~~p~~~----~~~~  376 (446)
T 4ejn_A          309 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE--------IRFPRTL----GPEA  376 (446)
T ss_dssp             SSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--------CCCCTTS----CHHH
T ss_pred             ccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCC--------CCCCccC----CHHH
Confidence            4678999999974  345789999999999999999999997654322211111111        1111111    2345


Q ss_pred             HHHHHHccCCCCCCCC-----ChHHHHH
Q 021659          268 LAVARLCIKTKDKPTI-----SIPQISR  290 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rp-----s~~evl~  290 (309)
                      .+++.+||+.||++||     ++.|+++
T Consensus       377 ~~li~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          377 KSLLSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             HHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence            5666699999999999     9999984

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=3.3e-39  Score=300.92  Aligned_cols=240  Identities=15%  Similarity=0.166  Sum_probs=180.9

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc---ccHHHHHHHHHHHccCCCCCcceEeeeEeC-------CeeEEEEe
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN---LEKDAFYREIQLLGRLHHRHLLALQGFSTG-------RKRLLVFD  112 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~---~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-------~~~~lv~e  112 (309)
                      +.||+|+||.||+|.. .+++.||+|++....   ...+++.+|+.+++.++||||+++++++..       ...|+|||
T Consensus        68 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E  147 (464)
T 3ttj_A           68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME  147 (464)
T ss_dssp             EEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEE
T ss_pred             EEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEEe
Confidence            5799999999999996 458899999996432   234578899999999999999999998743       34689999


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc----
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----  188 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----  188 (309)
                      |+++ +|.+.+.    ..+++..+..++.|++.||.||   |+.+|+||||||+||+++.++.+||+|||++....    
T Consensus       148 ~~~~-~l~~~~~----~~l~~~~~~~~~~qil~aL~~l---H~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  219 (464)
T 3ttj_A          148 LMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM  219 (464)
T ss_dssp             CCSE-EHHHHHT----SCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----CCC
T ss_pred             CCCC-CHHHHHh----hcCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCcc
Confidence            9987 5777664    3489999999999999999999   77799999999999999999999999999987543    


Q ss_pred             --ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccc-c----------------
Q 021659          189 --NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSS-I----------------  247 (309)
Q Consensus       189 --~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~-~----------------  247 (309)
                        ...+|+.|+|||...  .++.++|||||||++++|++|+.||.+.....++.......+. .                
T Consensus       220 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~  299 (464)
T 3ttj_A          220 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE  299 (464)
T ss_dssp             C----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHT
T ss_pred             cCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhh
Confidence              346789999999643  3578999999999999999999999876654443322111000 0                


Q ss_pred             ----------cccccCcCCCCCC---HHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          248 ----------HRMIDPDLGGSYD---SKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       248 ----------~~~~~~~l~~~~~---~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                                +......+.....   ......+.+++.+||+.||++|||+.|+++.
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  356 (464)
T 3ttj_A          300 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  356 (464)
T ss_dssp             TSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             cccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence                      0000000000000   1114567778889999999999999999853

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=1.6e-39  Score=289.74  Aligned_cols=245  Identities=21%  Similarity=0.301  Sum_probs=189.2

Q ss_pred             cccccccCCCceEEEEEEc-CCcE--EEEEEeccc--cccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEeeC
Q 021659           42 FHRIVYTNSHGAAYKARFQ-DGEV--ALVKEIQAL--NLEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFDNI  114 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~-~~~~--va~K~~~~~--~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e~~  114 (309)
                      +.+.||+|+||.||+|+.. ++..  +++|.+...  ....+.+.+|+++++++ +||||+++++++.+ ...++||||+
T Consensus        29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~  108 (327)
T 1fvr_A           29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA  108 (327)
T ss_dssp             EEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             ceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecC
Confidence            3468999999999999964 4554  488888532  22345789999999999 89999999997754 7788999999


Q ss_pred             CCCCHHHhhcCCC--------------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEec
Q 021659          115 ENGSLKEHLNDPL--------------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSD  180 (309)
Q Consensus       115 ~~~sL~~~i~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~d  180 (309)
                      ++++|.+++....              ...+++..++.++.|++.||.||   |+.+++||||||+||+++.++.+||+|
T Consensus       109 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~dlkp~NIl~~~~~~~kL~D  185 (327)
T 1fvr_A          109 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIAD  185 (327)
T ss_dssp             TTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECGGGCEEECC
T ss_pred             CCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCccceEEEcCCCeEEEcc
Confidence            9999999997632              24799999999999999999999   778999999999999999999999999


Q ss_pred             cccccccc------ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccc
Q 021659          181 VGFFNSVR------NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMI  251 (309)
Q Consensus       181 fg~~~~~~------~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~  251 (309)
                      ||++....      ...+++.|.|||....  .+.++||||||+++|+|++ |..||.+.... ........ +     .
T Consensus       186 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-~~~~~~~~-~-----~  258 (327)
T 1fvr_A          186 FGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-ELYEKLPQ-G-----Y  258 (327)
T ss_dssp             TTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHHHGGG-T-----C
T ss_pred             cCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH-HHHHHhhc-C-----C
Confidence            99986332      2245678999996533  4788999999999999998 99999765432 22221111 1     0


Q ss_pred             cCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcccc
Q 021659          252 DPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQC  300 (309)
Q Consensus       252 ~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~  300 (309)
                      ........    ...+.+++.+||..||++|||+.++++.|++++.-..
T Consensus       259 ~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  303 (327)
T 1fvr_A          259 RLEKPLNC----DDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK  303 (327)
T ss_dssp             CCCCCTTB----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred             CCCCCCCC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence            11111111    2456677779999999999999999999988776543

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=2.5e-40  Score=293.96  Aligned_cols=256  Identities=18%  Similarity=0.281  Sum_probs=195.1

Q ss_pred             cCHHHHHHhhcccc--cccccCCCceEEEEEEc------CCcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEe
Q 021659           30 FSYKDIKMATDGFH--RIVYTNSHGAAYKARFQ------DGEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQ   99 (309)
Q Consensus        30 ~~~~~i~~~~~~~~--~~lg~G~~~~v~~~~~~------~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~   99 (309)
                      +..++.....+.|.  +.||+|+||.||+|...      ++..||+|.+.....  ....+.+|++++++++||||++++
T Consensus        15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~   94 (322)
T 1p4o_A           15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL   94 (322)
T ss_dssp             CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred             cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence            33333444444454  68999999999999864      367899999864332  234688999999999999999999


Q ss_pred             eeEeC-CeeEEEEeeCCCCCHHHhhcCC--------CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceee
Q 021659          100 GFSTG-RKRLLVFDNIENGSLKEHLNDP--------LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIML  170 (309)
Q Consensus       100 ~~~~~-~~~~lv~e~~~~~sL~~~i~~~--------~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill  170 (309)
                      +++.+ ...++||||+++++|.+++...        ....+++..++.++.|++.||.||   |+++++||||||+||++
T Consensus        95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dikp~NIli  171 (322)
T 1p4o_A           95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYL---NANKFVHRDLAARNCMV  171 (322)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHH---HHTTCBCSCCSGGGEEE
T ss_pred             EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHH---HHCCCccCCCccceEEE
Confidence            98865 6778999999999999998641        125678999999999999999999   77799999999999999


Q ss_pred             CCCCceeEeccccccccc---------ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHH
Q 021659          171 DENFTAKLSDVGFFNSVR---------NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWI  238 (309)
Q Consensus       171 ~~~~~~kl~dfg~~~~~~---------~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~  238 (309)
                      +.++.+||+|||++....         ...+++.|+|||...  ..+.++||||||+++|+|++ |..||.+..... ..
T Consensus       172 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-~~  250 (322)
T 1p4o_A          172 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ-VL  250 (322)
T ss_dssp             CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH-HH
T ss_pred             cCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHH-HH
Confidence            999999999999986432         123466799999643  34788999999999999999 889987653321 11


Q ss_pred             HHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccc
Q 021659          239 QESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQ  299 (309)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~  299 (309)
                      ..... ...     +......    ...+.+++.+||+.||++|||+.|+++.|++...-.
T Consensus       251 ~~~~~-~~~-----~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~  301 (322)
T 1p4o_A          251 RFVME-GGL-----LDKPDNC----PDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG  301 (322)
T ss_dssp             HHHHT-TCC-----CCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTT
T ss_pred             HHHHc-CCc-----CCCCCCC----CHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccC
Confidence            11111 111     0111111    234566777999999999999999999999876543

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=4.5e-40  Score=293.85  Aligned_cols=242  Identities=18%  Similarity=0.255  Sum_probs=186.3

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccccc---HHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLE---KDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~s  118 (309)
                      +.||+|+||.||++... +++.||+|++......   .+.+.+|++++++++||||+++++++.+ ...++||||+++++
T Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~  110 (331)
T 4aaa_A           31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTI  110 (331)
T ss_dssp             EEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEH
T ss_pred             eEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcch
Confidence            58999999999999975 4889999998544333   3457899999999999999999998765 67889999999999


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccC
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYA  191 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~  191 (309)
                      |.+++..  ...+++..+..++.+++.||.||   |+.+++||||||+||+++.++.+||+|||++....       ...
T Consensus       111 l~~~~~~--~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  185 (331)
T 4aaa_A          111 LDDLELF--PNGLDYQVVQKYLFQIINGIGFC---HSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV  185 (331)
T ss_dssp             HHHHHHS--TTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEECCCTTC------------CC
T ss_pred             HHHHHhh--ccCCCHHHHHHHHHHHHHHHHHH---HHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCccccCCCc
Confidence            9988765  46799999999999999999999   77899999999999999999999999999986432       346


Q ss_pred             CCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccc--------------ccccccccCc
Q 021659          192 TMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSIS--------------SSIHRMIDPD  254 (309)
Q Consensus       192 ~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~  254 (309)
                      +++.|+|||...   ..+.++||||||+++|+|++|+.||.+..............              ........+.
T Consensus       186 ~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (331)
T 4aaa_A          186 ATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPE  265 (331)
T ss_dssp             CCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCC
T ss_pred             CCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCcc
Confidence            788999999643   34788999999999999999999998765443322211100              0011111111


Q ss_pred             CCCCCCH-----HHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          255 LGGSYDS-----KELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       255 l~~~~~~-----~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .......     .....+.+++.+||+.||++|||+.|+++
T Consensus       266 ~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          266 IKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             CSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             ccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            1111111     12356777777999999999999999884

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=1.5e-39  Score=285.43  Aligned_cols=231  Identities=15%  Similarity=0.201  Sum_probs=186.1

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||++... +++.+|+|.+....    ...+.+.+|+.++++++||||+++++++.+ ...++||||++++
T Consensus        21 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  100 (294)
T 2rku_A           21 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRR  100 (294)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred             EEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCCC
Confidence            68999999999999975 47889999985432    234578899999999999999999998865 6778999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------cc
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NY  190 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~  190 (309)
                      +|.+++..  ...+++..+..++.|++.||.||   |+.+++||||+|+||+++.++.+||+|||++....       ..
T Consensus       101 ~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  175 (294)
T 2rku_A          101 SLLELHKR--RKALTEPEARYYLRQIVLGCQYL---HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL  175 (294)
T ss_dssp             BHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCC
T ss_pred             CHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCChHhEEEcCCCCEEEEeccCceecccCccccccc
Confidence            99999875  46799999999999999999999   77799999999999999999999999999986542       23


Q ss_pred             CCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHH
Q 021659          191 ATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL  268 (309)
Q Consensus       191 ~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~  268 (309)
                      .+++.|.|||....  .+.++||||||+++++|++|+.||................        ..++...    ...+.
T Consensus       176 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--------~~~~~~~----~~~~~  243 (294)
T 2rku_A          176 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNE--------YSIPKHI----NPVAA  243 (294)
T ss_dssp             CSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTC--------CCCCTTS----CHHHH
T ss_pred             cCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhcc--------CCCcccc----CHHHH
Confidence            57788999996443  4778999999999999999999998654332222111111        1111111    23455


Q ss_pred             HHHHHccCCCCCCCCChHHHHHH
Q 021659          269 AVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       269 ~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      +++.+||+.||++|||+.|+++.
T Consensus       244 ~li~~~l~~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          244 SLIQKMLQTDPTARPTINELLND  266 (294)
T ss_dssp             HHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             HHHHHHcccChhhCcCHHHHhhC
Confidence            66779999999999999999963

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=1e-39  Score=291.48  Aligned_cols=240  Identities=17%  Similarity=0.192  Sum_probs=179.6

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccccc---HHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLE---KDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~s  118 (309)
                      +.||+|+||.||++.. .+++.||+|++......   .+.+.+|++++++++||||+++++++.+ ...++||||+++ +
T Consensus        40 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~  118 (329)
T 3gbz_A           40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-D  118 (329)
T ss_dssp             EEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCSE-E
T ss_pred             EEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCCC-C
Confidence            5899999999999996 46889999999543322   3457899999999999999999997754 778899999986 9


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceee-----CCCCceeEeccccccccc-----
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIML-----DENFTAKLSDVGFFNSVR-----  188 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill-----~~~~~~kl~dfg~~~~~~-----  188 (309)
                      |.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||++     +.++.+||+|||++....     
T Consensus       119 L~~~~~~--~~~~~~~~~~~i~~ql~~~l~~L---H~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~~  193 (329)
T 3gbz_A          119 LKKYMDK--NPDVSMRVIKSFLYQLINGVNFC---HSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQ  193 (329)
T ss_dssp             HHHHHHH--CTTCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-----
T ss_pred             HHHHHhh--cCCCCHHHHHHHHHHHHHHHHHH---HhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcccc
Confidence            9999976  56799999999999999999999   77899999999999999     455569999999986432     


Q ss_pred             --ccCCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccc-----cc------cccc
Q 021659          189 --NYATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSS-----IH------RMID  252 (309)
Q Consensus       189 --~~~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~-----~~------~~~~  252 (309)
                        ...+|+.|+|||...+   .+.++|||||||++|+|++|+.||.+..............+.     ..      .+..
T Consensus       194 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (329)
T 3gbz_A          194 FTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQ  273 (329)
T ss_dssp             ------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred             cCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhh
Confidence              2356889999996533   478899999999999999999999876554433322111000     00      0000


Q ss_pred             --CcCCCCCCHH------HHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          253 --PDLGGSYDSK------ELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       253 --~~l~~~~~~~------~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                        +.... ....      ....+.+++.+||+.||++|||+.|+++
T Consensus       274 ~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          274 SFPKFRG-KTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             TCCCCCC-CCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hhhhhcc-ccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence              00000 0000      1245667777999999999999999986

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=6.4e-40  Score=285.87  Aligned_cols=234  Identities=18%  Similarity=0.288  Sum_probs=187.3

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-----------------C
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-----------------R  105 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-----------------~  105 (309)
                      +.||+|+||.||++... +++.||+|.+....   +.+.+|++++++++||||+++++++..                 .
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (284)
T 2a19_B           17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTK   93 (284)
T ss_dssp             EEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEEE
T ss_pred             eeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCcc
Confidence            68999999999999985 68999999986433   357789999999999999999997632                 3


Q ss_pred             eeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccc
Q 021659          106 KRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFN  185 (309)
Q Consensus       106 ~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~  185 (309)
                      ..++||||+++++|.+++.......+++..++.++.|++.||.||   |+.+++|+||+|+||+++.++.+||+|||++.
T Consensus        94 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  170 (284)
T 2a19_B           94 CLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYI---HSKKLINRDLKPSNIFLVDTKQVKIGDFGLVT  170 (284)
T ss_dssp             EEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred             eEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeeccCCHHHEEEcCCCCEEECcchhhe
Confidence            367999999999999999754356799999999999999999999   77799999999999999999999999999986


Q ss_pred             ccc------ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCC
Q 021659          186 SVR------NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGG  257 (309)
Q Consensus       186 ~~~------~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  257 (309)
                      ...      ...+++.|.|||...  ..+.++||||||+++++|++|..|+...........            ...+..
T Consensus       171 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~------------~~~~~~  238 (284)
T 2a19_B          171 SLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLR------------DGIISD  238 (284)
T ss_dssp             ESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHH------------TTCCCT
T ss_pred             eccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHHHHHhh------------cccccc
Confidence            543      235788999999643  347889999999999999999998753322111111            111111


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccc
Q 021659          258 SYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQ  299 (309)
Q Consensus       258 ~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~  299 (309)
                      ..+    ..+.+++.+||..||++|||+.|+++.|+......
T Consensus       239 ~~~----~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~  276 (284)
T 2a19_B          239 IFD----KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP  276 (284)
T ss_dssp             TSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC--
T ss_pred             cCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCC
Confidence            122    34556677999999999999999999998766544

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=1.5e-40  Score=294.38  Aligned_cols=253  Identities=16%  Similarity=0.211  Sum_probs=193.2

Q ss_pred             HHHHHhhcccc--cccccCCCceEEEEEE------cCCcEEEEEEeccccc--cHHHHHHHHHHHccC-CCCCcceEeee
Q 021659           33 KDIKMATDGFH--RIVYTNSHGAAYKARF------QDGEVALVKEIQALNL--EKDAFYREIQLLGRL-HHRHLLALQGF  101 (309)
Q Consensus        33 ~~i~~~~~~~~--~~lg~G~~~~v~~~~~------~~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l-~h~niv~~~~~  101 (309)
                      .+.....+.|.  +.||+|+||.||+|..      .+++.||+|.+.....  ..+.+.+|+.+++++ +||||++++++
T Consensus        20 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~   99 (316)
T 2xir_A           20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA   99 (316)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEE
Confidence            33333334444  6899999999999984      3468899999864332  235788999999999 69999999998


Q ss_pred             EeC--CeeEEEEeeCCCCCHHHhhcCCCC--------------CCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCC
Q 021659          102 STG--RKRLLVFDNIENGSLKEHLNDPLK--------------TPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISS  165 (309)
Q Consensus       102 ~~~--~~~~lv~e~~~~~sL~~~i~~~~~--------------~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p  165 (309)
                      +..  ...++||||+++++|.+++.....              ..+++..+..++.|++.||.||   |+.+++||||||
T Consensus       100 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~i~H~dikp  176 (316)
T 2xir_A          100 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA  176 (316)
T ss_dssp             ECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSG
T ss_pred             EecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHH---HhCCcccccCcc
Confidence            764  357899999999999999976322              2288999999999999999999   777999999999


Q ss_pred             CceeeCCCCceeEecccccccccc---------cCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCcc
Q 021659          166 SSIMLDENFTAKLSDVGFFNSVRN---------YATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVD  233 (309)
Q Consensus       166 ~nill~~~~~~kl~dfg~~~~~~~---------~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~  233 (309)
                      +||+++.++.+||+|||++.....         ..+++.|+|||..  ...+.++||||||+++|+|++ |..||.+...
T Consensus       177 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~  256 (316)
T 2xir_A          177 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI  256 (316)
T ss_dssp             GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC
T ss_pred             ceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccch
Confidence            999999999999999999864421         2345679999964  334788999999999999998 9999976432


Q ss_pred             HHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcc
Q 021659          234 LIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDI  298 (309)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~  298 (309)
                      ........... .     ........    ...+.+++.+||+.||++|||+.++++.|+++++.
T Consensus       257 ~~~~~~~~~~~-~-----~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  311 (316)
T 2xir_A          257 DEEFCRRLKEG-T-----RMRAPDYT----TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  311 (316)
T ss_dssp             SHHHHHHHHHT-C-----CCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hHHHHHHhccC-c-----cCCCCCCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence            22222111111 0     01111111    23566777799999999999999999999987653

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=3.5e-39  Score=283.02  Aligned_cols=250  Identities=15%  Similarity=0.180  Sum_probs=192.7

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEe--CCeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFST--GRKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~--~~~~~lv~e~~~~~sL~  120 (309)
                      +.||+|+||.||+|+. .+++.||+|++.... ..+.+.+|+.+++.++|++++..+.++.  ....++||||+ +++|.
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~   92 (296)
T 3uzp_A           15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLE   92 (296)
T ss_dssp             EEEEEETTEEEEEEEETTTTEEEEEEEEESCS-SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHH
T ss_pred             EEEccCCCeEEEEEEEcCCCcEEEEEEecCCc-chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCCHH
Confidence            6899999999999997 578999999885433 3356899999999999988877777543  36778999999 88999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeC---CCCceeEeccccccccc---------
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLD---ENFTAKLSDVGFFNSVR---------  188 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~---~~~~~kl~dfg~~~~~~---------  188 (309)
                      +++... ...+++..+..++.|++.||.||   |+.+++||||||+||+++   .++.+||+|||++....         
T Consensus        93 ~~~~~~-~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  168 (296)
T 3uzp_A           93 DLFNFC-SRKFSLKTVLLLADQMISRIEYI---HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIP  168 (296)
T ss_dssp             HHHHHT-TTCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCC
T ss_pred             HHHHhh-ccCCCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccccc
Confidence            999732 45799999999999999999999   778999999999999995   78899999999986432         


Q ss_pred             -----ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCc-----cHHHHHHHhcccccccccccCcCC
Q 021659          189 -----NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDV-----DLIQWIQESSISSSIHRMIDPDLG  256 (309)
Q Consensus       189 -----~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~  256 (309)
                           ...+++.|+|||...+  .++++||||||+++|+|++|+.||....     .....+.........     +.+.
T Consensus       169 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~  243 (296)
T 3uzp_A          169 YRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-----EVLC  243 (296)
T ss_dssp             CCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH-----HHHT
T ss_pred             cccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch-----HHHH
Confidence                 2357889999997543  4778999999999999999999997532     111111111110000     0011


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcccccc-cccccc
Q 021659          257 GSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCYK-YSRVSF  308 (309)
Q Consensus       257 ~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~~~-~~~~~~  308 (309)
                      ...    ...+.+++.+||+.||++|||+.++++.|+++......+ ....||
T Consensus       244 ~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~~~~~dw  292 (296)
T 3uzp_A          244 KGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW  292 (296)
T ss_dssp             TTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCCSSCCCGG
T ss_pred             hhC----CHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCcccccccc
Confidence            111    245667777999999999999999999999988776665 333555

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=3.2e-39  Score=289.89  Aligned_cols=243  Identities=17%  Similarity=0.212  Sum_probs=188.9

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccccH------------------HHHHHHHHHHccCCCCCcceEeeeEeC-
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEK------------------DAFYREIQLLGRLHHRHLLALQGFSTG-  104 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~------------------~~~~~ei~~l~~l~h~niv~~~~~~~~-  104 (309)
                      +.||+|+||.||+|.. +++.||+|.+.......                  +.+.+|+.++++++||||+++++++.+ 
T Consensus        37 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~  115 (348)
T 2pml_X           37 RTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNY  115 (348)
T ss_dssp             EEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEESS
T ss_pred             EEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEeeC
Confidence            5899999999999999 89999999995432211                  789999999999999999999998765 


Q ss_pred             CeeEEEEeeCCCCCHHHh------hcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCC-CCeeecccCCCceeeCCCCcee
Q 021659          105 RKRLLVFDNIENGSLKEH------LNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSN-LPMYYVSISSSSIMLDENFTAK  177 (309)
Q Consensus       105 ~~~~lv~e~~~~~sL~~~------i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~-~~i~H~dl~p~nill~~~~~~k  177 (309)
                      ...++||||+++++|.++      +.......+++..++.++.+++.||.||   |+ .+++||||+|+||+++.++.+|
T Consensus       116 ~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~~i~H~dl~p~Nil~~~~~~~k  192 (348)
T 2pml_X          116 DEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYI---HNEKNICHRDVKPSNILMDKNGRVK  192 (348)
T ss_dssp             SEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHH---HHTSCEECCCCCGGGEEECTTSCEE
T ss_pred             CeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHH---hccCCEeecCCChHhEEEcCCCcEE
Confidence            678899999999999998      6554467899999999999999999999   65 8999999999999999999999


Q ss_pred             Eeccccccccc-----ccCCCCCCCCCCCCCCC---CC-CCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccc-cc
Q 021659          178 LSDVGFFNSVR-----NYATMPHSSCPEDCSTQ---DC-SNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISS-SI  247 (309)
Q Consensus       178 l~dfg~~~~~~-----~~~~~~~~~~PE~~~~~---~~-~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~-~~  247 (309)
                      |+|||++....     ...++..|.|||.....   +. ++||||||+++++|++|+.||................. ..
T Consensus       193 l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~  272 (348)
T 2pml_X          193 LSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEY  272 (348)
T ss_dssp             ECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCC
T ss_pred             EeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCC
Confidence            99999987542     34678899999986554   23 89999999999999999999987654333332221111 11


Q ss_pred             cc----cccCcCC---CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          248 HR----MIDPDLG---GSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       248 ~~----~~~~~l~---~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      +.    ...+...   ..........+.+++.+||+.||++|||+.|+++
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          273 PLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             CCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             ccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            10    0000000   0000112345667777999999999999999986

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=1e-39  Score=296.14  Aligned_cols=227  Identities=20%  Similarity=0.227  Sum_probs=173.6

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccc----cHHHHHHHHHH-HccCCCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL----EKDAFYREIQL-LGRLHHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~----~~~~~~~ei~~-l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||+++.. +++.||+|++.....    ....+..|..+ ++.++||||+++++++.+ ...|+||||+++
T Consensus        44 ~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~g  123 (373)
T 2r5t_A           44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING  123 (373)
T ss_dssp             EEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred             EEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCCC
Confidence            68999999999999975 578999999964432    23456677776 467899999999997755 788899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc-------cc
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-------RN  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-------~~  189 (309)
                      |+|.+++..  ...+++..+..++.+++.||.||   |+++++||||||+||+++.++.+||+|||+++..       ..
T Consensus       124 g~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~L---H~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~~~~  198 (373)
T 2r5t_A          124 GELFYHLQR--ERCFLEPRARFYAAEIASALGYL---HSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTST  198 (373)
T ss_dssp             CBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCCCCS
T ss_pred             CcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCceecCCCHHHEEECCCCCEEEeeCccccccccCCCcccc
Confidence            999999976  56799999999999999999999   7789999999999999999999999999998742       23


Q ss_pred             cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          190 YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ..+|+.|+|||...+  .+.++|+|||||++|||++|..||.+..............        ..+....    ...+
T Consensus       199 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~--------~~~~~~~----~~~~  266 (373)
T 2r5t_A          199 FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKP--------LQLKPNI----TNSA  266 (373)
T ss_dssp             BSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSC--------CCCCSSS----CHHH
T ss_pred             ccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcc--------cCCCCCC----CHHH
Confidence            468899999996443  4788999999999999999999998654322211111110        0111111    2345


Q ss_pred             HHHHHHccCCCCCCCCChHH
Q 021659          268 LAVARLCIKTKDKPTISIPQ  287 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~e  287 (309)
                      .+++.+||+.||++||++.+
T Consensus       267 ~~li~~lL~~dp~~R~~~~~  286 (373)
T 2r5t_A          267 RHLLEGLLQKDRTKRLGAKD  286 (373)
T ss_dssp             HHHHHHHTCSSGGGSTTTTT
T ss_pred             HHHHHHHcccCHHhCCCCCC
Confidence            56666999999999999853

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=7.8e-41  Score=298.72  Aligned_cols=241  Identities=17%  Similarity=0.267  Sum_probs=187.0

Q ss_pred             cccccCCCceEEEEEEcC-C-----cEEEEEEecccc--ccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEee
Q 021659           44 RIVYTNSHGAAYKARFQD-G-----EVALVKEIQALN--LEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~-~-----~~va~K~~~~~~--~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      +.||+|+||.||+|.... +     ..||+|.+....  ...+.+.+|+.+++++ +||||+++++++.. ...++||||
T Consensus        52 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~  131 (333)
T 2i1m_A           52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEY  131 (333)
T ss_dssp             EEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             eEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEec
Confidence            589999999999999632 2     479999986433  2345789999999999 89999999998865 678899999


Q ss_pred             CCCCCHHHhhcCC------------CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecc
Q 021659          114 IENGSLKEHLNDP------------LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDV  181 (309)
Q Consensus       114 ~~~~sL~~~i~~~------------~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~df  181 (309)
                      +++|+|.+++...            ....+++..++.++.|++.||.||   |+.+++||||||+||+++.++.+||+||
T Consensus       132 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dlkp~NIl~~~~~~~kl~Df  208 (333)
T 2i1m_A          132 CCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDF  208 (333)
T ss_dssp             CTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGCEEEGGGEEEBCCC
T ss_pred             CCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHH---hcCCcccCCcccceEEECCCCeEEECcc
Confidence            9999999998642            135689999999999999999999   6779999999999999999999999999


Q ss_pred             cccccccc---------cCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccc
Q 021659          182 GFFNSVRN---------YATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHR  249 (309)
Q Consensus       182 g~~~~~~~---------~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~  249 (309)
                      |++.....         ..+++.|+|||..  ...+.++||||||+++|+|++ |..||.+............. ..   
T Consensus       209 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~-~~---  284 (333)
T 2i1m_A          209 GLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD-GY---  284 (333)
T ss_dssp             GGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHH-TC---
T ss_pred             ccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhc-CC---
Confidence            99874422         2335579999964  335788999999999999998 99999764332221111110 00   


Q ss_pred             cccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          250 MIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       250 ~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                        .+..... .   ...+.+++.+||+.||++|||+.++++.|++...
T Consensus       285 --~~~~~~~-~---~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~  326 (333)
T 2i1m_A          285 --QMAQPAF-A---PKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ  326 (333)
T ss_dssp             --CCCCCTT-C---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             --CCCCCCC-C---CHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence              0111111 1   2455667779999999999999999999987654

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=4.3e-39  Score=286.31  Aligned_cols=234  Identities=16%  Similarity=0.212  Sum_probs=183.7

Q ss_pred             cccccccCCCceEEEEEEc-CCcEEEEEEeccccc---------cHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEE
Q 021659           42 FHRIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL---------EKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVF  111 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~---------~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~  111 (309)
                      +.+.||+|+||.||+|... +++.||+|.+.....         ....+.+|++++++++||||+++++++.....++||
T Consensus        14 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~lv~   93 (322)
T 2ycf_A           14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVL   93 (322)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEE
T ss_pred             EeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCceEEEE
Confidence            3478999999999999974 578999999854321         123578999999999999999999998877789999


Q ss_pred             eeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCc---eeEeccccccccc
Q 021659          112 DNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFT---AKLSDVGFFNSVR  188 (309)
Q Consensus       112 e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~---~kl~dfg~~~~~~  188 (309)
                      ||+++++|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.   +||+|||++....
T Consensus        94 e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~  168 (322)
T 2ycf_A           94 ELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYL---HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG  168 (322)
T ss_dssp             ECCTTEETHHHHST--TCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECC
T ss_pred             ecCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHEEEecCCCCCeEEEccCccceecc
Confidence            99999999999976  57899999999999999999999   7789999999999999987654   9999999987654


Q ss_pred             c------cCCCCCCCCCCCC-----CCCCCCCcEeehhhHHHHHHhCCCCCCCCcc---HHHHHHHhcccccccccccCc
Q 021659          189 N------YATMPHSSCPEDC-----STQDCSNIIFQLGVLILELVTGQSPEEGDVD---LIQWIQESSISSSIHRMIDPD  254 (309)
Q Consensus       189 ~------~~~~~~~~~PE~~-----~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~  254 (309)
                      .      ..+++.|.|||..     ...+.++||||||+++|+|++|..||.....   +...+..... ..     .+.
T Consensus       169 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~-----~~~  242 (322)
T 2ycf_A          169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY-NF-----IPE  242 (322)
T ss_dssp             CCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCC-CC-----CHH
T ss_pred             cccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCcc-cc-----Cch
Confidence            3      3578999999963     3347889999999999999999999975432   2222211110 00     000


Q ss_pred             CCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          255 LGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       255 l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ....    ....+.+++.+||..||++|||+.++++
T Consensus       243 ~~~~----~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          243 VWAE----VSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             HHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             hhhh----cCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence            0011    1345667777999999999999999883

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=2.5e-39  Score=289.76  Aligned_cols=225  Identities=18%  Similarity=0.212  Sum_probs=182.5

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc---------cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEe
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL---------EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFD  112 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~---------~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e  112 (309)
                      +.||+|+||.||+|.. .+++.||+|.+.....         ..+.+.+|++++++++||||+++++++.+ ...++|||
T Consensus        30 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e  109 (335)
T 3dls_A           30 SPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVME  109 (335)
T ss_dssp             EECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             eEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEEE
Confidence            5899999999999996 5688999999864332         22357789999999999999999998765 67789999


Q ss_pred             eCCCC-CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---
Q 021659          113 NIENG-SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---  188 (309)
Q Consensus       113 ~~~~~-sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---  188 (309)
                      |+.+| +|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....   
T Consensus       110 ~~~~g~~l~~~~~~--~~~l~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~  184 (335)
T 3dls_A          110 KHGSGLDLFAFIDR--HPRLDEPLASYIFRQLVSAVGYL---RLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK  184 (335)
T ss_dssp             CCTTSCBHHHHHHT--CCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred             eCCCCccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HhCCeEEeccCHHHEEEcCCCcEEEeecccceECCCCC
Confidence            99776 99999987  56799999999999999999999   77799999999999999999999999999987543   


Q ss_pred             ---ccCCCCCCCCCCCCCCC---CCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHH
Q 021659          189 ---NYATMPHSSCPEDCSTQ---DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSK  262 (309)
Q Consensus       189 ---~~~~~~~~~~PE~~~~~---~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  262 (309)
                         ...+|+.|+|||...+.   +.++||||||+++|+|++|+.||......            ......+   ....  
T Consensus       185 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------------~~~~~~~---~~~~--  247 (335)
T 3dls_A          185 LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------------VEAAIHP---PYLV--  247 (335)
T ss_dssp             CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------------TTTCCCC---SSCC--
T ss_pred             ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------------HhhccCC---Cccc--
Confidence               23578899999975432   56789999999999999999999753211            0000000   0111  


Q ss_pred             HHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          263 ELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       263 ~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                       ...+.+++.+||++||++|||+.++++.
T Consensus       248 -~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          248 -SKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             -CHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             -CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence             2345566669999999999999999975

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=3.5e-39  Score=280.38  Aligned_cols=231  Identities=16%  Similarity=0.204  Sum_probs=180.5

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|++|.||+|... +++.||+|.+....    ...+.+.+|+..+++++||||+++++++.. ...++||||++++
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   96 (276)
T 2h6d_A           17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGG   96 (276)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred             eeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCCC
Confidence            68999999999999975 68899999985432    234678999999999999999999997765 6788999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------ccC
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------NYA  191 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------~~~  191 (309)
                      +|.+++..  ...+++..+..++.|++.||.||   |+.+++|+||+|+||+++.++.++|+|||++....      ...
T Consensus        97 ~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  171 (276)
T 2h6d_A           97 ELFDYICK--HGRVEEMEARRLFQQILSAVDYC---HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC  171 (276)
T ss_dssp             BHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHH---HHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--------
T ss_pred             cHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHH---HHCCCccCCCChhhEEECCCCCEEEeecccccccCCCcceeccc
Confidence            99999976  46789999999999999999999   67799999999999999999999999999987543      235


Q ss_pred             CCCCCCCCCCCCCC---CCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHH
Q 021659          192 TMPHSSCPEDCSTQ---DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL  268 (309)
Q Consensus       192 ~~~~~~~PE~~~~~---~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~  268 (309)
                      +++.|.|||...+.   +.++||||||+++++|++|+.||...... ........ ..      ...+...    ...+.
T Consensus       172 ~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~-~~------~~~~~~~----~~~l~  239 (276)
T 2h6d_A          172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP-TLFKKIRG-GV------FYIPEYL----NRSVA  239 (276)
T ss_dssp             -----CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHH-CC------CCCCTTS----CHHHH
T ss_pred             CCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH-HHHHHhhc-Cc------ccCchhc----CHHHH
Confidence            67889999976543   46899999999999999999999764322 11111111 00      0111111    23455


Q ss_pred             HHHHHccCCCCCCCCChHHHHHH
Q 021659          269 AVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       269 ~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      +++.+||+.||++|||+.|+++.
T Consensus       240 ~li~~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          240 TLLMHMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHccCChhhCCCHHHHHhC
Confidence            67779999999999999999964

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=2.1e-39  Score=284.24  Aligned_cols=250  Identities=16%  Similarity=0.196  Sum_probs=190.7

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeE-e-CCeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFS-T-GRKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~-~-~~~~~lv~e~~~~~sL~  120 (309)
                      +.||+|+||.||+|.. .+++.||+|++.... ..+.+.+|+++++.++|++++..+.++ . ....++||||+ +++|.
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~   92 (296)
T 4hgt_A           15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLE   92 (296)
T ss_dssp             EEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHH
T ss_pred             eeecCCCCeEEEEEEEcCCCceEEEEeecccc-cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCCHH
Confidence            6899999999999996 568899999874433 234588899999999998888877755 3 36778999999 88999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceee---CCCCceeEeccccccccc---------
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIML---DENFTAKLSDVGFFNSVR---------  188 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill---~~~~~~kl~dfg~~~~~~---------  188 (309)
                      +++... ...+++..+..++.|++.||.||   |+.+++||||||+||++   +.++.+||+|||++....         
T Consensus        93 ~~~~~~-~~~~~~~~~~~i~~qi~~~l~~L---H~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~  168 (296)
T 4hgt_A           93 DLFNFC-SRKFSLKTVLLLADQMISRIEYI---HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIP  168 (296)
T ss_dssp             HHHHHT-TSCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCC
T ss_pred             HHHHHh-cCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCC
Confidence            998732 35699999999999999999999   77899999999999999   788999999999986442         


Q ss_pred             -----ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCcc-----HHHHHHHhcccccccccccCcCC
Q 021659          189 -----NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVD-----LIQWIQESSISSSIHRMIDPDLG  256 (309)
Q Consensus       189 -----~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~  256 (309)
                           ...+++.|+|||...+  .++++||||||+++|+|++|+.||.+...     ..............     +...
T Consensus       169 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~  243 (296)
T 4hgt_A          169 YRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-----EVLC  243 (296)
T ss_dssp             CCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH-----HHHT
T ss_pred             CCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh-----hhhh
Confidence                 2357788999997543  46789999999999999999999975321     11111111100000     0000


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccccccc-ccccc
Q 021659          257 GSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCYKY-SRVSF  308 (309)
Q Consensus       257 ~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~~~~-~~~~~  308 (309)
                      ...    ...+.+++.+||+.||++|||+.++++.|+++..-...+. ...||
T Consensus       244 ~~~----~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~~~~~~dw  292 (296)
T 4hgt_A          244 KGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW  292 (296)
T ss_dssp             TTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCCTTCCCGG
T ss_pred             ccC----CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCCccCccch
Confidence            111    2456677779999999999999999999999888766553 34455

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=1.9e-39  Score=290.44  Aligned_cols=230  Identities=15%  Similarity=0.204  Sum_probs=185.5

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||++... +++.+|+|.+....    ...+.+.+|+.++++++||||+++++++.+ ...++||||++++
T Consensus        47 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  126 (335)
T 2owb_A           47 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRR  126 (335)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCCC
Confidence            58999999999999975 47889999985432    234578899999999999999999998765 6778999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------cc
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NY  190 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~  190 (309)
                      +|.+++..  ...+++..+..++.|++.||.||   |+.+++||||+|+||+++.++.+||+|||++....       ..
T Consensus       127 ~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  201 (335)
T 2owb_A          127 SLLELHKR--RKALTEPEARYYLRQIVLGCQYL---HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL  201 (335)
T ss_dssp             BHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCC
T ss_pred             CHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHH---HHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCccccccc
Confidence            99999876  46799999999999999999999   77899999999999999999999999999986543       23


Q ss_pred             CCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHH
Q 021659          191 ATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL  268 (309)
Q Consensus       191 ~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~  268 (309)
                      .++..|++||...  ..+.++||||||+++|+|++|+.||................        ..+....    ...+.
T Consensus       202 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~--------~~~~~~~----~~~~~  269 (335)
T 2owb_A          202 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNE--------YSIPKHI----NPVAA  269 (335)
T ss_dssp             CSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTC--------CCCCTTS----CHHHH
T ss_pred             CCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCC--------CCCCccC----CHHHH
Confidence            5788899999643  34778999999999999999999998654322221111110        1111111    23455


Q ss_pred             HHHHHccCCCCCCCCChHHHHH
Q 021659          269 AVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       269 ~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      +++.+||+.||++|||+.|+++
T Consensus       270 ~li~~~l~~dp~~Rps~~ell~  291 (335)
T 2owb_A          270 SLIQKMLQTDPTARPTINELLN  291 (335)
T ss_dssp             HHHHHHTCSSGGGSCCGGGGGG
T ss_pred             HHHHHHccCChhHCcCHHHHhc
Confidence            6677999999999999999985

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.1e-39  Score=292.65  Aligned_cols=246  Identities=16%  Similarity=0.206  Sum_probs=181.9

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeCC-------eeEEEEe
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTGR-------KRLLVFD  112 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~~-------~~~lv~e  112 (309)
                      +.||+|+||.||+|.. .+|+.||+|++.....   ..+.+.+|++++++++||||+++++++...       ..|+|||
T Consensus        31 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e  110 (367)
T 1cm8_A           31 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMP  110 (367)
T ss_dssp             EEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEE
T ss_pred             EEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEEe
Confidence            5799999999999997 4689999999854322   235688999999999999999999987542       3589999


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc----
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----  188 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----  188 (309)
                      |+ +++|.+++..   ..+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....    
T Consensus       111 ~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  183 (367)
T 1cm8_A          111 FM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYI---HAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMT  183 (367)
T ss_dssp             CC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSCC
T ss_pred             cC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHH---HHCCccccCcCHHHEEEcCCCCEEEEeeecccccccccC
Confidence            99 7799999875   5699999999999999999999   77899999999999999999999999999987543    


Q ss_pred             ccCCCCCCCCCCCC---CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccc------------------
Q 021659          189 NYATMPHSSCPEDC---STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSI------------------  247 (309)
Q Consensus       189 ~~~~~~~~~~PE~~---~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~------------------  247 (309)
                      ...+|+.|.|||..   ...+.++|||||||++++|++|+.||.+.....+........+..                  
T Consensus       184 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~  263 (367)
T 1cm8_A          184 GYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMK  263 (367)
T ss_dssp             SSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHH
T ss_pred             cCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHH
Confidence            34678889999964   345889999999999999999999998765443322211110000                  


Q ss_pred             --cccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH--HHhhhhc
Q 021659          248 --HRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR--YLQNEVD  297 (309)
Q Consensus       248 --~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~--~L~~~~~  297 (309)
                        +......+. .........+.+++.+||..||++|||+.|+++  .+++.-+
T Consensus       264 ~~~~~~~~~~~-~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~~  316 (367)
T 1cm8_A          264 GLPELEKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHD  316 (367)
T ss_dssp             HSCCCCCCCGG-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC-
T ss_pred             hCCCCCCCCHH-HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhcC
Confidence              000000000 001111244556667999999999999999986  4554433

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=3.8e-39  Score=282.65  Aligned_cols=235  Identities=17%  Similarity=0.193  Sum_probs=183.6

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc-ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN-LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~-~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      ..||+|+||.||+|.. .++..||+|.+.... ...+.+.+|+.++++++||||+++++++.. ...++||||+++++|.
T Consensus        28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  107 (295)
T 2clq_A           28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS  107 (295)
T ss_dssp             CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred             EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence            3799999999999997 457899999985433 335678999999999999999999997754 6788999999999999


Q ss_pred             HhhcCC-CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC-CCceeEeccccccccc-------ccC
Q 021659          121 EHLNDP-LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE-NFTAKLSDVGFFNSVR-------NYA  191 (309)
Q Consensus       121 ~~i~~~-~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~-~~~~kl~dfg~~~~~~-------~~~  191 (309)
                      +++... ....+++..+..++.+++.||.||   |+.+++|+||+|+||+++. ++.+||+|||++....       ...
T Consensus       108 ~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  184 (295)
T 2clq_A          108 ALLRSKWGPLKDNEQTIGFYTKQILEGLKYL---HDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT  184 (295)
T ss_dssp             HHHHHTTCCCTTCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CCCC
T ss_pred             HHHHhhccCCCccHHHHHHHHHHHHHHHHHH---HhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccccC
Confidence            999753 234677899999999999999999   7789999999999999987 8999999999986543       235


Q ss_pred             CCCCCCCCCCCCC----CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          192 TMPHSSCPEDCST----QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       192 ~~~~~~~PE~~~~----~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      +++.|.|||....    .+.++||||||+++|+|++|+.||.................     ..+.+....    ...+
T Consensus       185 ~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-----~~~~~~~~~----~~~~  255 (295)
T 2clq_A          185 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK-----VHPEIPESM----SAEA  255 (295)
T ss_dssp             CCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHC-----CCCCCCTTS----CHHH
T ss_pred             CCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccc-----ccccccccC----CHHH
Confidence            7788999996432    57789999999999999999999975433222111111000     112222222    2355


Q ss_pred             HHHHHHccCCCCCCCCChHHHHH
Q 021659          268 LAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .+++.+||+.||++|||+.++++
T Consensus       256 ~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          256 KAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             HHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHccCChhhCCCHHHHhc
Confidence            56777999999999999999985

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=8.7e-40  Score=300.06  Aligned_cols=247  Identities=16%  Similarity=0.163  Sum_probs=188.9

Q ss_pred             HHHHHHhhcccc--cccccCCCceEEEEEEc-CCcEEEEEEeccccc----cHHHHHHHHHHHccCCCCCcceEeeeEeC
Q 021659           32 YKDIKMATDGFH--RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL----EKDAFYREIQLLGRLHHRHLLALQGFSTG  104 (309)
Q Consensus        32 ~~~i~~~~~~~~--~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~----~~~~~~~ei~~l~~l~h~niv~~~~~~~~  104 (309)
                      +.++....++|.  +.||+|+||.||+++.. +++.||+|++.....    ..+.+.+|+.++.+++||||+++++++.+
T Consensus        53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~  132 (412)
T 2vd5_A           53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD  132 (412)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred             hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence            344444556665  58999999999999974 689999999854321    22357899999999999999999997765


Q ss_pred             -CeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccc
Q 021659          105 -RKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGF  183 (309)
Q Consensus       105 -~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~  183 (309)
                       ...|+||||+++|+|.+++... ...+++..+..++.+++.||.||   |+.+|+||||||+||+++.++.+||+|||+
T Consensus       133 ~~~~~lVmE~~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~L---H~~giiHrDLKp~NILld~~g~vkL~DFGl  208 (412)
T 2vd5_A          133 ENYLYLVMEYYVGGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSV---HRLGYVHRDIKPDNILLDRCGHIRLADFGS  208 (412)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred             CCEEEEEEcCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHH---HHCCeeecccCHHHeeecCCCCEEEeechh
Confidence             7788999999999999999752 24799999999999999999999   778999999999999999999999999999


Q ss_pred             ccccc--------ccCCCCCCCCCCCCC---------CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccc
Q 021659          184 FNSVR--------NYATMPHSSCPEDCS---------TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSS  246 (309)
Q Consensus       184 ~~~~~--------~~~~~~~~~~PE~~~---------~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~  246 (309)
                      +....        ...+|+.|+|||...         .++.++|+|||||++|||++|+.||.+................
T Consensus       209 a~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~  288 (412)
T 2vd5_A          209 CLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEH  288 (412)
T ss_dssp             CEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH
T ss_pred             heeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC
Confidence            86542        236889999999643         3478899999999999999999999865433222111110000


Q ss_pred             ccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCC---CChHHHHH
Q 021659          247 IHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPT---ISIPQISR  290 (309)
Q Consensus       247 ~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~R---ps~~evl~  290 (309)
                         ..-|......    ...+.+++.+||. +|+.|   |++.|+++
T Consensus       289 ---~~~p~~~~~~----s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~  327 (412)
T 2vd5_A          289 ---LSLPLVDEGV----PEEARDFIQRLLC-PPETRLGRGGAGDFRT  327 (412)
T ss_dssp             ---CCCC----CC----CHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred             ---cCCCccccCC----CHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence               0011111111    2345566669999 99888   58989874

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.5e-39  Score=290.17  Aligned_cols=240  Identities=19%  Similarity=0.242  Sum_probs=172.5

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc-ccHHHHHHHHHHHccCC-CCCcceEeeeEe--------C-CeeEEEE
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN-LEKDAFYREIQLLGRLH-HRHLLALQGFST--------G-RKRLLVF  111 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~-~~~~~~~~ei~~l~~l~-h~niv~~~~~~~--------~-~~~~lv~  111 (309)
                      +.||+|+||.||+++. .+++.||+|++.... ...+.+.+|+.+++++. ||||+++++++.        . ...++||
T Consensus        34 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~  113 (337)
T 3ll6_A           34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLT  113 (337)
T ss_dssp             EEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEE
T ss_pred             EEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEEE
Confidence            6899999999999997 468899999884433 23457889999999996 999999999762        2 3467999


Q ss_pred             eeCCCCCHHHhhcC-CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCC--eeecccCCCceeeCCCCceeEeccccccccc
Q 021659          112 DNIENGSLKEHLND-PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLP--MYYVSISSSSIMLDENFTAKLSDVGFFNSVR  188 (309)
Q Consensus       112 e~~~~~sL~~~i~~-~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~--i~H~dl~p~nill~~~~~~kl~dfg~~~~~~  188 (309)
                      ||+. |+|.+++.. .....+++..++.++.+++.||.||   |+.+  ++||||||+||+++.++.+||+|||++....
T Consensus       114 e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~  189 (337)
T 3ll6_A          114 ELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHM---HRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTIS  189 (337)
T ss_dssp             ECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHH---HTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCS
T ss_pred             EecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HhCCCCEEEccCCcccEEECCCCCEEEecCccceecc
Confidence            9996 599888753 1246799999999999999999999   6777  9999999999999999999999999987543


Q ss_pred             -------------------ccCCCCCCCCCCCCC-----CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccc
Q 021659          189 -------------------NYATMPHSSCPEDCS-----TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSIS  244 (309)
Q Consensus       189 -------------------~~~~~~~~~~PE~~~-----~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~  244 (309)
                                         ...+++.|+|||...     ..+.++||||||+++|+|++|+.||............    
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~----  265 (337)
T 3ll6_A          190 HYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGK----  265 (337)
T ss_dssp             SCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------------
T ss_pred             ccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhcCc----
Confidence                               224778899999752     2367899999999999999999999754322110000    


Q ss_pred             ccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccccc
Q 021659          245 SSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCY  301 (309)
Q Consensus       245 ~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~~  301 (309)
                            ..... ....   ...+.+++.+||+.||++|||+.|+++.|+........
T Consensus       266 ------~~~~~-~~~~---~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~  312 (337)
T 3ll6_A          266 ------YSIPP-HDTQ---YTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNV  312 (337)
T ss_dssp             ------CCCCT-TCCS---SGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTC
T ss_pred             ------ccCCc-cccc---chHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCC
Confidence                  00000 0111   12355667799999999999999999999987765443

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=2.6e-39  Score=306.58  Aligned_cols=234  Identities=17%  Similarity=0.217  Sum_probs=186.5

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccc----cccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQAL----NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~----~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||+|... +++.||+|++...    ......+.+|++++++++||||+++++++.+ ...|+||||+++|
T Consensus       190 ~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg  269 (576)
T 2acx_A          190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGG  269 (576)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCCC
Confidence            58999999999999974 6899999998542    2334668899999999999999999997755 7788999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------ccC
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------NYA  191 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------~~~  191 (309)
                      +|.+++.......+++..+..++.|++.||.||   |+.+|+||||||+||+++.++.+||+|||++....      ...
T Consensus       270 ~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yL---H~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~~~~~  346 (576)
T 2acx_A          270 DLKFHIYHMGQAGFPEARAVFYAAEICCGLEDL---HRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV  346 (576)
T ss_dssp             BHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCEECCC
T ss_pred             cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HHCCEeccCCchheEEEeCCCCeEEEecccceecccCccccccC
Confidence            999999875556699999999999999999999   77799999999999999999999999999987542      346


Q ss_pred             CCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCcc--HHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          192 TMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVD--LIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       192 ~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      +|+.|+|||....  ++.++|+|||||++|+|++|+.||.....  ....+.......      ........    ...+
T Consensus       347 GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~------~~~~p~~~----s~~~  416 (576)
T 2acx_A          347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV------PEEYSERF----SPQA  416 (576)
T ss_dssp             SCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHC------CCCCCTTS----CHHH
T ss_pred             CCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcc------cccCCccC----CHHH
Confidence            8899999997544  47889999999999999999999986431  111111111000      01111111    2345


Q ss_pred             HHHHHHccCCCCCCCC-----ChHHHHH
Q 021659          268 LAVARLCIKTKDKPTI-----SIPQISR  290 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rp-----s~~evl~  290 (309)
                      .+++.+||+.||++||     ++.|+++
T Consensus       417 ~dLI~~lL~~dP~~R~g~~~~sa~eil~  444 (576)
T 2acx_A          417 RSLCSQLLCKDPAERLGCRGGSAREVKE  444 (576)
T ss_dssp             HHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred             HHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence            5666699999999999     6788874

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=3.6e-39  Score=290.17  Aligned_cols=243  Identities=17%  Similarity=0.183  Sum_probs=184.3

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC---------CeeEEE
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG---------RKRLLV  110 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~---------~~~~lv  110 (309)
                      +.||+|+||.||+|.. .+++.||+|++.....   ....+.+|++++++++||||+++++++..         ...++|
T Consensus        23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv  102 (351)
T 3mi9_A           23 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLV  102 (351)
T ss_dssp             EECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEEE
T ss_pred             EEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEEE
Confidence            6899999999999997 5689999998843322   24578899999999999999999997643         357899


Q ss_pred             EeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc--
Q 021659          111 FDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR--  188 (309)
Q Consensus       111 ~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~--  188 (309)
                      |||+++ +|.+.+... ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....  
T Consensus       103 ~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~L---H~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~  177 (351)
T 3mi9_A          103 FDFCEH-DLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYI---HRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLA  177 (351)
T ss_dssp             EECCSE-EHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCCC
T ss_pred             EeccCC-CHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeCCCCCHHHEEEcCCCCEEEccchhccccccc
Confidence            999986 777777543 35699999999999999999999   77899999999999999999999999999986432  


Q ss_pred             ---------ccCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcC-
Q 021659          189 ---------NYATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDL-  255 (309)
Q Consensus       189 ---------~~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l-  255 (309)
                               ...+|+.|+|||...   ..+.++||||||+++++|++|+.||.+..............+....-..+.. 
T Consensus       178 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  257 (351)
T 3mi9_A          178 KNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD  257 (351)
T ss_dssp             SSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred             ccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccc
Confidence                     235678899999643   3478999999999999999999999876544332221111111110000000 


Q ss_pred             ------------CCCCCH-HH------HHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          256 ------------GGSYDS-KE------LKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       256 ------------~~~~~~-~~------~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                                  ...... ..      ...+.+++.+||+.||++|||+.|+++.
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  312 (351)
T 3mi9_A          258 NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  312 (351)
T ss_dssp             GCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             cchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence                        000011 11      2346678889999999999999999863

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=8.6e-40  Score=291.40  Aligned_cols=251  Identities=17%  Similarity=0.252  Sum_probs=187.8

Q ss_pred             ccccccCCCceEEEEEE-----cCCcEEEEEEecccc-ccHHHHHHHHHHHccCCCCCcceEeeeEeC---CeeEEEEee
Q 021659           43 HRIVYTNSHGAAYKARF-----QDGEVALVKEIQALN-LEKDAFYREIQLLGRLHHRHLLALQGFSTG---RKRLLVFDN  113 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-----~~~~~va~K~~~~~~-~~~~~~~~ei~~l~~l~h~niv~~~~~~~~---~~~~lv~e~  113 (309)
                      .+.||+|+||.||++++     .+++.||+|.+.... ...+.+.+|++++++++||||+++++++..   ...++||||
T Consensus        46 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~  125 (326)
T 2w1i_A           46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY  125 (326)
T ss_dssp             EEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECC
T ss_pred             eeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEEC
Confidence            36899999999999984     368899999986433 234678999999999999999999997753   357899999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc----
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN----  189 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~----  189 (309)
                      +++++|.+++... ...+++..++.++.+++.||.+|   |+.+++||||||+||+++.++.+||+|||++.....    
T Consensus       126 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~  201 (326)
T 2w1i_A          126 LPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEY  201 (326)
T ss_dssp             CTTCBHHHHHHHS-TTSSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSE
T ss_pred             CCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHH---HhCCEeccCCCcceEEEcCCCcEEEecCcchhhccccccc
Confidence            9999999999753 35699999999999999999999   778999999999999999999999999999875432    


Q ss_pred             ------cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccc-----ccccccccCcCC
Q 021659          190 ------YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSIS-----SSIHRMIDPDLG  256 (309)
Q Consensus       190 ------~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~  256 (309)
                            ..++..|.|||....  .+.++||||||+++++|++|..|+................     ....+.+.....
T Consensus       202 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (326)
T 2w1i_A          202 YKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR  281 (326)
T ss_dssp             EECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCC
T ss_pred             cccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCC
Confidence                  234456999996433  4678999999999999999999986432111000000000     000000000000


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          257 GSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       257 ~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                      ..........+.+++.+||..||++|||+.|+++.|+++.+
T Consensus       282 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~  322 (326)
T 2w1i_A          282 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD  322 (326)
T ss_dssp             CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            00011123456677779999999999999999999987654

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=3.1e-39  Score=289.92  Aligned_cols=232  Identities=16%  Similarity=0.217  Sum_probs=179.8

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      +.||+|+||.||++... +++.||+|.+.....   ...+|++++.++ +||||+++++++.+ ...|+||||+++|+|.
T Consensus        28 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~  104 (342)
T 2qr7_A           28 EDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELL  104 (342)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcHH
Confidence            68999999999999974 588999999965433   245688888888 79999999998765 6788999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC----CceeEeccccccccc-------c
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN----FTAKLSDVGFFNSVR-------N  189 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~----~~~kl~dfg~~~~~~-------~  189 (309)
                      +++..  ...+++..+..++.+++.||.||   |+.+++||||||+||++..+    +.+||+|||++....       .
T Consensus       105 ~~i~~--~~~~~~~~~~~~~~qi~~al~~l---H~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~  179 (342)
T 2qr7_A          105 DKILR--QKFFSEREASAVLFTITKTVEYL---HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMT  179 (342)
T ss_dssp             HHHHT--CTTCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCBCC
T ss_pred             HHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCceec
Confidence            99976  56799999999999999999999   77899999999999998543    359999999987542       3


Q ss_pred             cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCc--cHHHHHHHhcccccccccccCcCCCCCCHHHHH
Q 021659          190 YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDV--DLIQWIQESSISSSIHRMIDPDLGGSYDSKELK  265 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  265 (309)
                      ..+|+.|+|||....  ++.++||||||+++|+|++|..||.+..  ......... ..+..      ............
T Consensus       180 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i-~~~~~------~~~~~~~~~~s~  252 (342)
T 2qr7_A          180 PCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARI-GSGKF------SLSGGYWNSVSD  252 (342)
T ss_dssp             SSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHH-HHCCC------CCCSTTTTTSCH
T ss_pred             cCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHH-ccCCc------ccCccccccCCH
Confidence            357889999997543  4678999999999999999999997532  222222111 11110      011111111123


Q ss_pred             HHHHHHHHccCCCCCCCCChHHHHH
Q 021659          266 KLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       266 ~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .+.+++.+||..||++|||+.++++
T Consensus       253 ~~~~li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          253 TAKDLVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHCCCChhHCcCHHHHhc
Confidence            4556666999999999999999984

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.8e-39  Score=288.45  Aligned_cols=243  Identities=21%  Similarity=0.197  Sum_probs=184.0

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccccc------HHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLE------KDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIE  115 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~------~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~  115 (309)
                      +.||+|+||.||+|... +++.||+|.+......      .+.+.+|++++++++||||+++++++.+ ...++||||++
T Consensus        16 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   95 (346)
T 1ua2_A           16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME   95 (346)
T ss_dssp             EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCS
T ss_pred             eEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcCC
Confidence            68999999999999974 5889999998543221      2367899999999999999999998765 67889999998


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------  188 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------  188 (309)
                      + +|.+++... ...+++..+..++.+++.||.||   |+.+++||||||+||+++.++.+||+|||++....       
T Consensus        96 ~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~  170 (346)
T 1ua2_A           96 T-DLEVIIKDN-SLVLTPSHIKAYMLMTLQGLEYL---HQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYT  170 (346)
T ss_dssp             E-EHHHHHTTC-CSSCCSSHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCC
T ss_pred             C-CHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHH---HHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCcccCC
Confidence            7 899888753 35688899999999999999999   77899999999999999999999999999987542       


Q ss_pred             ccCCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcc--cccccccccC---------c
Q 021659          189 NYATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSI--SSSIHRMIDP---------D  254 (309)
Q Consensus       189 ~~~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~---------~  254 (309)
                      ...+|+.|+|||...+   .+.++||||||+++|+|++|.+||.+.............  ......+.+.         .
T Consensus       171 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  250 (346)
T 1ua2_A          171 HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK  250 (346)
T ss_dssp             CSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCC
T ss_pred             cccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCccccccc
Confidence            2457889999996432   467899999999999999999999876544332221111  0000000000         0


Q ss_pred             CCCCCC-----HHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          255 LGGSYD-----SKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       255 l~~~~~-----~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      ......     ......+.+++.+||..||++|||+.|+++.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  292 (346)
T 1ua2_A          251 SFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  292 (346)
T ss_dssp             CCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             ccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence            000001     1113456677779999999999999999964

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.2e-39  Score=290.34  Aligned_cols=242  Identities=15%  Similarity=0.174  Sum_probs=179.8

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccccH--HHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLEK--DAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~~--~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      +.||+|+||.||+|+.. +++.||+|++.......  ..+.+|++++++++||||+++++++.+ ...++||||+++ +|
T Consensus         8 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l   86 (324)
T 3mtl_A            8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK-DL   86 (324)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCSE-EH
T ss_pred             EEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEeccccc-CH
Confidence            68999999999999975 68899999985433221  245679999999999999999998765 678899999985 89


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYAT  192 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~~  192 (309)
                      .+++... ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....       ...+
T Consensus        87 ~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  162 (324)
T 3mtl_A           87 KQYLDDC-GNIINMHNVKLFLFQLLRGLAYC---HRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV  162 (324)
T ss_dssp             HHHHHHT-TTCCCHHHHHHHHHHHHHHHHHH---HHTTEEESSCCGGGEEECTTCCEEECSSSEEECC------------
T ss_pred             HHHHHhc-CCCCCHHHHHHHHHHHHHHHHHH---HHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCccccccccC
Confidence            8888653 45699999999999999999999   77899999999999999999999999999986443       2356


Q ss_pred             CCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhc--c---cccccccccC---------cC
Q 021659          193 MPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESS--I---SSSIHRMIDP---------DL  255 (309)
Q Consensus       193 ~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~--~---~~~~~~~~~~---------~l  255 (309)
                      ++.|+|||...   ..+.++||||||+++|+|++|+.||.+............  .   ....+.....         ..
T Consensus       163 t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (324)
T 3mtl_A          163 TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKY  242 (324)
T ss_dssp             CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCC
T ss_pred             cccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccc
Confidence            88899999643   347889999999999999999999987654332221111  0   0001111000         00


Q ss_pred             CCCC----CHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          256 GGSY----DSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       256 ~~~~----~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ....    .......+.+++.+||+.||++|||+.|+++
T Consensus       243 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  281 (324)
T 3mtl_A          243 RAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK  281 (324)
T ss_dssp             CCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             cchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence            0000    0011245567777999999999999999985

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=2.2e-38  Score=286.65  Aligned_cols=234  Identities=12%  Similarity=0.104  Sum_probs=185.2

Q ss_pred             cccccCCCceEEEEE------EcCCcEEEEEEeccccccHHHHHHHHHHHccCC---CCCcceEeeeEeC-CeeEEEEee
Q 021659           44 RIVYTNSHGAAYKAR------FQDGEVALVKEIQALNLEKDAFYREIQLLGRLH---HRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~------~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~---h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      +.||+|+||.||+|.      ..+++.||+|++...  ...++..|+++++.++   |+||+.+++++.. ...++||||
T Consensus        71 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e~  148 (365)
T 3e7e_A           71 HLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGEL  148 (365)
T ss_dssp             EEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEECC
T ss_pred             EEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEec
Confidence            479999999999994      456889999998643  4567888888888886   8999999997754 778899999


Q ss_pred             CCCCCHHHhhcC---CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC-----------CCceeEe
Q 021659          114 IENGSLKEHLND---PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE-----------NFTAKLS  179 (309)
Q Consensus       114 ~~~~sL~~~i~~---~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~-----------~~~~kl~  179 (309)
                      +++|+|.+++..   .....+++..+..++.|++.||.||   |+.+|+||||||+|||++.           ++.+||+
T Consensus       149 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~l---H~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~  225 (365)
T 3e7e_A          149 YSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQV---HDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALI  225 (365)
T ss_dssp             CCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCSGGGEEECGGGTCC------CTTEEEC
T ss_pred             cCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHH---hhCCeecCCCCHHHEEecccccCccccccccCCEEEe
Confidence            999999999963   1256799999999999999999999   7789999999999999998           8999999


Q ss_pred             cccccccc---------cccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccccc
Q 021659          180 DVGFFNSV---------RNYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIH  248 (309)
Q Consensus       180 dfg~~~~~---------~~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~  248 (309)
                      |||++...         ....+|+.|+|||...+  +++++|||||||++|+|+||+.||.....         .    .
T Consensus       226 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~---------~----~  292 (365)
T 3e7e_A          226 DLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEG---------G----E  292 (365)
T ss_dssp             CCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEET---------T----E
T ss_pred             eCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCC---------C----c
Confidence            99999533         23468999999996443  47899999999999999999999864321         0    0


Q ss_pred             ccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCC-CChHHHHHHHhhhhcc
Q 021659          249 RMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPT-ISIPQISRYLQNEVDI  298 (309)
Q Consensus       249 ~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~R-ps~~evl~~L~~~~~~  298 (309)
                      ..+..........+.+.+++   ..|++.+|.+| |++.++.+.|++.++-
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~---~~~l~~~p~~r~~~~~~l~~~l~~~l~~  340 (365)
T 3e7e_A          293 CKPEGLFRRLPHLDMWNEFF---HVMLNIPDCHHLPSLDLLRQKLKKVFQQ  340 (365)
T ss_dssp             EEECSCCTTCSSHHHHHHHH---HHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             eeechhccccCcHHHHHHHH---HHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence            11122222223444455544   49999999988 5777888888876654

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=5.8e-39  Score=282.04  Aligned_cols=234  Identities=15%  Similarity=0.231  Sum_probs=180.7

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC--------------CeeE
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG--------------RKRL  108 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~--------------~~~~  108 (309)
                      +.||+|+||.||+|+. .+++.||+|.+.......+.+.+|+.++++++||||+++++++.+              ...+
T Consensus        12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (303)
T 1zy4_A           12 AVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLF   91 (303)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEEE
T ss_pred             heeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceE
Confidence            6899999999999997 468999999997655556778999999999999999999996532              4567


Q ss_pred             EEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc
Q 021659          109 LVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR  188 (309)
Q Consensus       109 lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~  188 (309)
                      +||||+++++|.+++... ...+++..++.++.|++.||.||   |+.+++||||+|+||+++.++.+||+|||++....
T Consensus        92 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~L---H~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  167 (303)
T 1zy4_A           92 IQMEYCENGTLYDLIHSE-NLNQQRDEYWRLFRQILEALSYI---HSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVH  167 (303)
T ss_dssp             EEEECCCSCBHHHHHHHS-CGGGCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTT
T ss_pred             EEEecCCCCCHHHhhhcc-ccccchHHHHHHHHHHHHHHHHH---HhCCeecccCCHHhEEEcCCCCEEEeeCcchhhcc
Confidence            999999999999999742 45678899999999999999999   77799999999999999999999999999986442


Q ss_pred             ---------------------ccCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccc
Q 021659          189 ---------------------NYATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSIS  244 (309)
Q Consensus       189 ---------------------~~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~  244 (309)
                                           ...+++.|.|||...   ..+.++||||||+++|+|++   ||................
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~~~~  244 (303)
T 1zy4_A          168 RSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSV  244 (303)
T ss_dssp             C-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHST
T ss_pred             cccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhcccc
Confidence                                 234778899999643   34788999999999999998   665433222222211110


Q ss_pred             ccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          245 SSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       245 ~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                             ....+..........+.+++.+||+.||++|||+.++++.
T Consensus       245 -------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  284 (303)
T 1zy4_A          245 -------SIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS  284 (303)
T ss_dssp             -------TCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             -------ccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence                   0111112222223456677779999999999999999863

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=7.7e-39  Score=282.15  Aligned_cols=231  Identities=20%  Similarity=0.277  Sum_probs=186.2

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL  119 (309)
                      +.||+|+||.||+|.. .+++.||+|.+....  ...+.+.+|+.++++++||||+++++++. +...++||||+++++|
T Consensus        28 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L  107 (303)
T 3a7i_A           28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA  107 (303)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred             hhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCcH
Confidence            5899999999999986 468899999985432  34578999999999999999999999765 4778899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYAT  192 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~~  192 (309)
                      .+++..   ..+++..+..++.+++.||.+|   |+.+++|+||+|+||+++.++.+||+|||++....       ...+
T Consensus       108 ~~~~~~---~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~  181 (303)
T 3a7i_A          108 LDLLEP---GPLDETQIATILREILKGLDYL---HSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVG  181 (303)
T ss_dssp             HHHHTT---SCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCCCCS
T ss_pred             HHHHhc---CCCCHHHHHHHHHHHHHHHHHH---HHCCCccCCCChheEEECCCCCEEEeecccceecCccccccCccCC
Confidence            999974   6799999999999999999999   77899999999999999999999999999986443       2357


Q ss_pred             CCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          193 MPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       193 ~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      ++.|.|||....  .+.++||||||+++++|++|+.||........... ... .     ..+.+....    ...+.++
T Consensus       182 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~-~-----~~~~~~~~~----~~~l~~l  250 (303)
T 3a7i_A          182 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFL-IPK-N-----NPPTLEGNY----SKPLKEF  250 (303)
T ss_dssp             CGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-HHH-S-----CCCCCCSSC----CHHHHHH
T ss_pred             CcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHH-hhc-C-----CCCCCcccc----CHHHHHH
Confidence            788999997533  46789999999999999999999976543222111 110 0     011222222    2345667


Q ss_pred             HHHccCCCCCCCCChHHHHHH
Q 021659          271 ARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       271 ~~~cl~~dp~~Rps~~evl~~  291 (309)
                      +.+||..||++|||+.++++.
T Consensus       251 i~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          251 VEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             HHHHCCSSGGGSCCHHHHTTC
T ss_pred             HHHHcCCChhhCcCHHHHhhC
Confidence            779999999999999999864

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=1.3e-38  Score=290.05  Aligned_cols=189  Identities=20%  Similarity=0.237  Sum_probs=158.2

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccccHHHHHHHHHHHccCC-CC-----CcceEeeeEe-CCeeEEEEeeCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLEKDAFYREIQLLGRLH-HR-----HLLALQGFST-GRKRLLVFDNIE  115 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~-h~-----niv~~~~~~~-~~~~~lv~e~~~  115 (309)
                      +.||+|+||.||+|... +++.||+|++.......+.+..|+.+++.++ |+     +|+.+++++. ....++||||+.
T Consensus        60 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~  139 (382)
T 2vx3_A           60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLS  139 (382)
T ss_dssp             EEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECCC
T ss_pred             EEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecCC
Confidence            58999999999999974 5789999999755544567788999988885 55     4888888664 478889999997


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeC--CCCceeEeccccccccc----c
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLD--ENFTAKLSDVGFFNSVR----N  189 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~--~~~~~kl~dfg~~~~~~----~  189 (309)
                      + +|.+++.......+++..+..++.|++.||.|||+ |..+|+||||||+||+++  .++.+||+|||++....    .
T Consensus       140 ~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~~~~  217 (382)
T 2vx3_A          140 Y-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ  217 (382)
T ss_dssp             C-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTCCCCS
T ss_pred             C-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEEecCCCCcEEEEeccCceeccccccc
Confidence            5 99999976544679999999999999999999964 378999999999999995  47889999999987543    3


Q ss_pred             cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccH
Q 021659          190 YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDL  234 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~  234 (309)
                      ..+|+.|+|||...+  .+.++|||||||++|+|++|+.||.+....
T Consensus       218 ~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~  264 (382)
T 2vx3_A          218 YIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEV  264 (382)
T ss_dssp             SCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             ccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            467889999997543  578999999999999999999999876543

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=2e-38  Score=280.67  Aligned_cols=233  Identities=18%  Similarity=0.261  Sum_probs=182.0

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCHHH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLKE  121 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL~~  121 (309)
                      +.||+|+||.||+|... +++.||+|.+.... ..+.+.+|+.++++++||||+++++++. +...++||||+++++|.+
T Consensus        35 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~  113 (314)
T 3com_A           35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSD  113 (314)
T ss_dssp             EECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHH
T ss_pred             eeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHHH
Confidence            58999999999999975 58899999986543 4567899999999999999999999765 477889999999999999


Q ss_pred             hhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccCCCC
Q 021659          122 HLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYATMP  194 (309)
Q Consensus       122 ~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~~~~  194 (309)
                      ++... ...+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++.+||+|||++....       ...+++
T Consensus       114 ~~~~~-~~~~~~~~~~~i~~~i~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  189 (314)
T 3com_A          114 IIRLR-NKTLTEDEIATILQSTLKGLEYL---HFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTP  189 (314)
T ss_dssp             HHHHH-TCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCCCCSCG
T ss_pred             HHHhc-CCCCCHHHHHHHHHHHHHHHHHH---HhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCccCCCC
Confidence            98631 46799999999999999999999   77899999999999999999999999999986443       235678


Q ss_pred             CCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHH
Q 021659          195 HSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVAR  272 (309)
Q Consensus       195 ~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~  272 (309)
                      .|.|||....  .+.++||||||+++|+|++|+.||...............  .......+       ......+.+++.
T Consensus       190 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~-------~~~~~~l~~li~  260 (314)
T 3com_A          190 FWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTN--PPPTFRKP-------ELWSDNFTDFVK  260 (314)
T ss_dssp             GGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS--CCCCCSSG-------GGSCHHHHHHHH
T ss_pred             CccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcC--CCcccCCc-------ccCCHHHHHHHH
Confidence            8999996443  478999999999999999999999865433322211110  00000001       011245566777


Q ss_pred             HccCCCCCCCCChHHHHH
Q 021659          273 LCIKTKDKPTISIPQISR  290 (309)
Q Consensus       273 ~cl~~dp~~Rps~~evl~  290 (309)
                      +||..||++|||+.++++
T Consensus       261 ~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          261 QCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             HHTCSCTTTSCCHHHHTT
T ss_pred             HHccCChhhCcCHHHHHh
Confidence            999999999999999985

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=7.1e-40  Score=286.75  Aligned_cols=240  Identities=19%  Similarity=0.231  Sum_probs=181.0

Q ss_pred             cccccCCCceEEEEEEc--CCc--EEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCC
Q 021659           44 RIVYTNSHGAAYKARFQ--DGE--VALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIE  115 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~--~~~--~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~  115 (309)
                      +.||+|+||.||+|.+.  ++.  .||+|.+....    ...+.+.+|++++++++||||+++++++.....++|+||++
T Consensus        24 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~  103 (291)
T 1u46_A           24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAP  103 (291)
T ss_dssp             EECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCT
T ss_pred             eeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCCceeeEeccc
Confidence            68999999999999863  233  68999885432    23467899999999999999999999988777899999999


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc------
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN------  189 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~------  189 (309)
                      +++|.+++... ...+++..+..++.+++.||.||   |+.+++|+||||+||+++.++.+||+|||++.....      
T Consensus       104 ~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~  179 (291)
T 1u46_A          104 LGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYL---ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV  179 (291)
T ss_dssp             TCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEE
T ss_pred             CCCHHHHHHhc-cCCcCHHHHHHHHHHHHHHHHHH---HhCCcccCCCchheEEEcCCCCEEEccccccccccccccchh
Confidence            99999998652 25689999999999999999999   777999999999999999999999999999865432      


Q ss_pred             ----cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHH
Q 021659          190 ----YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSK  262 (309)
Q Consensus       190 ----~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  262 (309)
                          ..++..|+|||....  .+.++||||||+++++|++ |+.||.+.... ............     ......    
T Consensus       180 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-~~~~~~~~~~~~-----~~~~~~----  249 (291)
T 1u46_A          180 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-QILHKIDKEGER-----LPRPED----  249 (291)
T ss_dssp             C-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHHHHHTSCCC-----CCCCTT----
T ss_pred             hhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH-HHHHHHHccCCC-----CCCCcC----
Confidence                234557999997533  4678999999999999999 99999765432 222211111100     111111    


Q ss_pred             HHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          263 ELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       263 ~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                      ....+.+++.+||..||++|||+.++++.|+++..
T Consensus       250 ~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  284 (291)
T 1u46_A          250 CPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP  284 (291)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             cCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence            13456677779999999999999999999986643

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=1.3e-38  Score=280.40  Aligned_cols=234  Identities=16%  Similarity=0.228  Sum_probs=181.7

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccc-cccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQAL-NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~-~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      +.||+|+||.||+|... ++..||+|.+... ....+.+.+|++++++++||||+++++++.. ...++||||+++++|.
T Consensus        25 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~  104 (302)
T 2j7t_A           25 GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVD  104 (302)
T ss_dssp             EEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEHH
T ss_pred             ceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHH
Confidence            57999999999999985 5889999998543 3345788999999999999999999997765 6778999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc-------cccCCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-------RNYATM  193 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-------~~~~~~  193 (309)
                      +++... ...+++..+..++.+++.||.||   |+.+++||||+|+||+++.++.+||+|||++...       ....++
T Consensus       105 ~~~~~~-~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~  180 (302)
T 2j7t_A          105 AIMLEL-DRGLTEPQIQVVCRQMLEALNFL---HSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGT  180 (302)
T ss_dssp             HHHHHH-TSCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC-----CC
T ss_pred             HHHHhh-ccCCCHHHHHHHHHHHHHHHHHH---hcCCcccCCCCHHHEEECCCCCEEEEECCCCccccccccccccccCC
Confidence            988642 35699999999999999999999   7779999999999999999999999999986422       234678


Q ss_pred             CCCCCCCCC-------CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          194 PHSSCPEDC-------STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       194 ~~~~~PE~~-------~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                      +.|.|||..       ...+.++||||||+++++|++|+.||............... . ......+       ......
T Consensus       181 ~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~-~~~~~~~-------~~~~~~  251 (302)
T 2j7t_A          181 PYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS-D-PPTLLTP-------SKWSVE  251 (302)
T ss_dssp             GGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS-C-CCCCSSG-------GGSCHH
T ss_pred             hhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhcc-C-CcccCCc-------cccCHH
Confidence            899999964       33477899999999999999999999865433222211111 1 0011000       111245


Q ss_pred             HHHHHHHccCCCCCCCCChHHHHH
Q 021659          267 LLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      +.+++.+||..||++|||+.++++
T Consensus       252 l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          252 FRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             HHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             HHHHHHHHcccChhhCCCHHHHhc
Confidence            666777999999999999999975

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=1.2e-38  Score=280.91  Aligned_cols=233  Identities=20%  Similarity=0.203  Sum_probs=183.1

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEecccc-----ccHHHHHHHHHHHccCCCCCcceEeeeEe--C-CeeEEEEee
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQALN-----LEKDAFYREIQLLGRLHHRHLLALQGFST--G-RKRLLVFDN  113 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~-----~~~~~~~~ei~~l~~l~h~niv~~~~~~~--~-~~~~lv~e~  113 (309)
                      .+.||+|+||.||++.. .+++.||+|.+....     ...+.+.+|++++++++||||+++++++.  + ...++||||
T Consensus        10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~   89 (305)
T 2wtk_C           10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEY   89 (305)
T ss_dssp             CCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEEC
T ss_pred             eeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehh
Confidence            36899999999999997 457899999985432     23467899999999999999999999763  2 467899999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-----
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-----  188 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-----  188 (309)
                      ++++ |.+++.......+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....     
T Consensus        90 ~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~L---H~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~  165 (305)
T 2wtk_C           90 CVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYL---HSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAAD  165 (305)
T ss_dssp             CSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSS
T ss_pred             ccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCcccEEEcCCCcEEeeccccccccCccccc
Confidence            9885 77777654467899999999999999999999   77799999999999999999999999999986542     


Q ss_pred             ----ccCCCCCCCCCCCCCCC----CCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCC
Q 021659          189 ----NYATMPHSSCPEDCSTQ----DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYD  260 (309)
Q Consensus       189 ----~~~~~~~~~~PE~~~~~----~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  260 (309)
                          ...+++.|.+||.....    +.++||||||+++|+|++|+.||.+.... ........ ..      ..+.... 
T Consensus       166 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~i~~-~~------~~~~~~~-  236 (305)
T 2wtk_C          166 DTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY-KLFENIGK-GS------YAIPGDC-  236 (305)
T ss_dssp             CEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHH-CC------CCCCSSS-
T ss_pred             cccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH-HHHHHHhc-CC------CCCCCcc-
Confidence                23578899999975432    56899999999999999999999865432 21111111 00      1111112 


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          261 SKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       261 ~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                         ...+.+++.+||..||++|||+.|+++.
T Consensus       237 ---~~~l~~li~~~l~~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          237 ---GPPLSDLLKGMLEYEPAKRFSIRQIRQH  264 (305)
T ss_dssp             ---CHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             ---CHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence               2345567779999999999999999953

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=6.6e-39  Score=289.43  Aligned_cols=184  Identities=18%  Similarity=0.268  Sum_probs=158.1

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL  119 (309)
                      +.||+|+||.||++... ++..||+|.+....  ...+.+.+|+.++++++||||+++++++. +...++||||+++++|
T Consensus        39 ~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L  118 (360)
T 3eqc_A           39 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL  118 (360)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred             eeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCCH
Confidence            58999999999999975 68899999986432  23457899999999999999999999765 4778899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCC-CCeeecccCCCceeeCCCCceeEecccccccc-----cccCCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSN-LPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-----RNYATM  193 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~-~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-----~~~~~~  193 (309)
                      .+++..  ...+++..+..++.+++.||.||   |+ .+++||||||+||+++.++.+||+|||++...     ....++
T Consensus       119 ~~~l~~--~~~~~~~~~~~i~~~i~~~l~~l---h~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~gt  193 (360)
T 3eqc_A          119 DQVLKK--AGRIPEQILGKVSIAVIKGLTYL---REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGT  193 (360)
T ss_dssp             HHHHHH--HSSCCHHHHHHHHHHHHHHHHHH---HHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----CCC
T ss_pred             HHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccccccCCCCC
Confidence            999976  46799999999999999999999   54 38999999999999999999999999998533     345788


Q ss_pred             CCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCc
Q 021659          194 PHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDV  232 (309)
Q Consensus       194 ~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~  232 (309)
                      +.|+|||...+  .+.++||||||+++|+|++|+.||....
T Consensus       194 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  234 (360)
T 3eqc_A          194 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD  234 (360)
T ss_dssp             CTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCC
T ss_pred             CCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            99999997543  4778999999999999999999997543

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=2.3e-38  Score=278.22  Aligned_cols=234  Identities=17%  Similarity=0.208  Sum_probs=184.8

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc----------ccHHHHHHHHHHHccCC-CCCcceEeeeEeC-CeeEEE
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----------LEKDAFYREIQLLGRLH-HRHLLALQGFSTG-RKRLLV  110 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----------~~~~~~~~ei~~l~~l~-h~niv~~~~~~~~-~~~~lv  110 (309)
                      +.||+|++|.||+|... +++.||+|.+....          ...+.+.+|+++++++. ||||+++++++.. ...++|
T Consensus        23 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv  102 (298)
T 1phk_A           23 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLV  102 (298)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             eeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEEE
Confidence            58999999999999974 58899999985432          11346789999999995 9999999998765 678899


Q ss_pred             EeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc--
Q 021659          111 FDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR--  188 (309)
Q Consensus       111 ~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~--  188 (309)
                      |||+++++|.+++..  ...+++..+..++.+++.||.||   |+.+++|+||+|+||+++.++.+||+|||++....  
T Consensus       103 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~  177 (298)
T 1phk_A          103 FDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICAL---HKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG  177 (298)
T ss_dssp             EECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred             EeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCcceEEEcCCCcEEEecccchhhcCCC
Confidence            999999999999976  46799999999999999999999   77899999999999999999999999999986543  


Q ss_pred             ----ccCCCCCCCCCCCC--------CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCC
Q 021659          189 ----NYATMPHSSCPEDC--------STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLG  256 (309)
Q Consensus       189 ----~~~~~~~~~~PE~~--------~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  256 (309)
                          ...+++.|.|||..        ...+.++||||||+++++|++|..||.................   ....+   
T Consensus       178 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~---  251 (298)
T 1phk_A          178 EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY---QFGSP---  251 (298)
T ss_dssp             CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC---CCCTT---
T ss_pred             cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCc---ccCcc---
Confidence                23577889999953        2346789999999999999999999976543222111111000   00001   


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          257 GSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       257 ~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                        ........+.+++.+||+.||++|||+.|+++
T Consensus       252 --~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          252 --EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             --TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             --cccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence              01112345667777999999999999999985

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=1.4e-38  Score=296.32  Aligned_cols=182  Identities=16%  Similarity=0.247  Sum_probs=144.3

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC------CeeEEEEee
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG------RKRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~------~~~~lv~e~  113 (309)
                      +.||+|+||.||+|... +++.||+|++.....   ..+.+.+|+++|++++||||+++++++..      ...|+||||
T Consensus        59 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~  138 (458)
T 3rp9_A           59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEI  138 (458)
T ss_dssp             CC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECC
T ss_pred             eEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEec
Confidence            58999999999999964 688999999854322   34578899999999999999999997732      457899999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-----
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-----  188 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-----  188 (309)
                      +. ++|.+++..  ...+++..+..++.|++.||.||   |+.+|+||||||+|||++.++.+||+|||+++...     
T Consensus       139 ~~-~~L~~~~~~--~~~l~~~~~~~~~~qi~~aL~~L---H~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~  212 (458)
T 3rp9_A          139 AD-SDFKKLFRT--PVYLTELHIKTLLYNLLVGVKYV---HSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENG  212 (458)
T ss_dssp             CS-EEHHHHHHS--SCCCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTC
T ss_pred             cc-cchhhhccc--CCCCCHHHHHHHHHHHHHHHHHH---HhCCcCCCCCChhhEEECCCCCEeecccccchhccCcccc
Confidence            85 599999976  57799999999999999999999   77799999999999999999999999999987542     


Q ss_pred             -----------------------------ccCCCCCCCCCCCC---CCCCCCCcEeehhhHHHHHHh-----------CC
Q 021659          189 -----------------------------NYATMPHSSCPEDC---STQDCSNIIFQLGVLILELVT-----------GQ  225 (309)
Q Consensus       189 -----------------------------~~~~~~~~~~PE~~---~~~~~~~Dv~slG~~l~~l~t-----------g~  225 (309)
                                                   ...+|+.|+|||..   ..++.++|||||||++|||++           |+
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~  292 (458)
T 3rp9_A          213 NSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRG  292 (458)
T ss_dssp             CCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCC
T ss_pred             ccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccccccccc
Confidence                                         23568889999953   335889999999999999999           66


Q ss_pred             CCCCCC
Q 021659          226 SPEEGD  231 (309)
Q Consensus       226 ~p~~~~  231 (309)
                      ++|.+.
T Consensus       293 p~f~g~  298 (458)
T 3rp9_A          293 PLFPGS  298 (458)
T ss_dssp             CSCC--
T ss_pred             ccCCCC
Confidence            666543

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=3.9e-39  Score=291.05  Aligned_cols=254  Identities=16%  Similarity=0.170  Sum_probs=186.7

Q ss_pred             HHHHHHhhcccc--cccccCCCceEEEEEEcCCcEEEEEEecccccc------------HHHHHHHHHHHccCCCCCcce
Q 021659           32 YKDIKMATDGFH--RIVYTNSHGAAYKARFQDGEVALVKEIQALNLE------------KDAFYREIQLLGRLHHRHLLA   97 (309)
Q Consensus        32 ~~~i~~~~~~~~--~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~------------~~~~~~ei~~l~~l~h~niv~   97 (309)
                      ..++....++|.  +.||+|+||.||+|...++..||+|++......            .+.+.+|++++++++||||++
T Consensus        14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   93 (362)
T 3pg1_A           14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG   93 (362)
T ss_dssp             HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence            456666677776  689999999999999878999999998542221            267899999999999999999


Q ss_pred             EeeeEeC------CeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeC
Q 021659           98 LQGFSTG------RKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLD  171 (309)
Q Consensus        98 ~~~~~~~------~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~  171 (309)
                      +++++..      ...++||||+.+ +|.+.+... ...+++..+..++.|++.||.||   |+.+++||||||+||+++
T Consensus        94 ~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dlkp~NIl~~  168 (362)
T 3pg1_A           94 LRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVL---HEAGVVHRDLHPGNILLA  168 (362)
T ss_dssp             CSEEEEECCTTTCCEEEEEEECCSE-EHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEEC
T ss_pred             eeeeEEeccCCCcceEEEEEccCCC-CHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHH---HHCcCEecCCChHHEEEc
Confidence            9997631      356899999985 888888652 45799999999999999999999   777999999999999999


Q ss_pred             CCCceeEeccccccccc------ccCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhc
Q 021659          172 ENFTAKLSDVGFFNSVR------NYATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESS  242 (309)
Q Consensus       172 ~~~~~kl~dfg~~~~~~------~~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~  242 (309)
                      .++.+||+|||++....      ...+++.|+|||...   ..+.++||||||+++|+|++|+.||.+............
T Consensus       169 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~  248 (362)
T 3pg1_A          169 DNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVE  248 (362)
T ss_dssp             TTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             CCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            99999999999986432      235677899999643   357889999999999999999999987543322111100


Q ss_pred             --cccc-----------ccccccCcCC---CCC----CHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          243 --ISSS-----------IHRMIDPDLG---GSY----DSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       243 --~~~~-----------~~~~~~~~l~---~~~----~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                        ....           ..........   ...    .......+.+++.+||+.||++|||+.|+++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  316 (362)
T 3pg1_A          249 VVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR  316 (362)
T ss_dssp             HHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence              0000           0000000000   000    0011345667777999999999999999985

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=2.9e-39  Score=281.27  Aligned_cols=243  Identities=20%  Similarity=0.221  Sum_probs=186.5

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEe---CCeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFST---GRKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~---~~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||++... +++.||+|.+.....   ..+.+.+|++++++++||||+++++++.   +...++||||+++
T Consensus        12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~   91 (279)
T 2w5a_A           12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEG   91 (279)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTT
T ss_pred             hhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCC
Confidence            68999999999999974 689999999964332   3457889999999999999999999663   3678899999999


Q ss_pred             CCHHHhhcCC--CCCCCCHHHHHHHHHHHHHHHhhhhhcC--CCCeeecccCCCceeeCCCCceeEecccccccccc---
Q 021659          117 GSLKEHLNDP--LKTPLDWKTRLQIAIGVAAALEYLLLFS--NLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN---  189 (309)
Q Consensus       117 ~sL~~~i~~~--~~~~l~~~~~~~i~~~i~~~l~~lh~~h--~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~---  189 (309)
                      ++|.+++...  ....+++..++.++.+++.||.|||...  ..+++||||+|+||+++.++.+||+|||++.....   
T Consensus        92 ~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~~  171 (279)
T 2w5a_A           92 GDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS  171 (279)
T ss_dssp             EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---CH
T ss_pred             CCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeeccccc
Confidence            9999998642  2456999999999999999999994321  12399999999999999999999999999865432   


Q ss_pred             ----cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHH
Q 021659          190 ----YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKE  263 (309)
Q Consensus       190 ----~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  263 (309)
                          ..+++.|.|||....  .+.++||||||+++|+|++|+.||...... ...... ..+..     +.+....    
T Consensus       172 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~i-~~~~~-----~~~~~~~----  240 (279)
T 2w5a_A          172 FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK-ELAGKI-REGKF-----RRIPYRY----  240 (279)
T ss_dssp             HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHH-HHTCC-----CCCCTTS----
T ss_pred             cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH-HHHHHH-hhccc-----ccCCccc----
Confidence                357889999997443  467899999999999999999999865322 111111 11111     1111122    


Q ss_pred             HHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          264 LKKLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       264 ~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                      ...+.+++.+||+.||++|||+.|+++.+....+
T Consensus       241 ~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~  274 (279)
T 2w5a_A          241 SDELNEIITRMLNLKDYHRPSVEEILENPLILEH  274 (279)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGG
T ss_pred             CHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhh
Confidence            2455667779999999999999999988764443

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=7.3e-39  Score=281.75  Aligned_cols=240  Identities=19%  Similarity=0.254  Sum_probs=171.4

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccc--cccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQAL--NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~--~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      +.||+|+||.||++.. .+++.||+|.+...  ....+.+.+|+.++++++||||+++++++.. ...++||||+++++|
T Consensus        21 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L  100 (303)
T 2vwi_A           21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSV  100 (303)
T ss_dssp             EECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCBH
T ss_pred             heeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCch
Confidence            6899999999999985 46889999988543  2234578899999999999999999997764 678899999999999


Q ss_pred             HHhhcC------CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-----
Q 021659          120 KEHLND------PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-----  188 (309)
Q Consensus       120 ~~~i~~------~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-----  188 (309)
                      .+++..      .....+++..+..++.|++.||.||   |+.+++||||+|+||+++.++.+||+|||++....     
T Consensus       101 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~  177 (303)
T 2vwi_A          101 LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL---HKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDI  177 (303)
T ss_dssp             HHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC-----
T ss_pred             HHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHH---HhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCCc
Confidence            998863      1246699999999999999999999   77799999999999999999999999999875432     


Q ss_pred             -------ccCCCCCCCCCCCC---CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccc-cc-cccccCcCC
Q 021659          189 -------NYATMPHSSCPEDC---STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISS-SI-HRMIDPDLG  256 (309)
Q Consensus       189 -------~~~~~~~~~~PE~~---~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~-~~-~~~~~~~l~  256 (309)
                             ...+++.|.|||..   ...+.++||||||+++++|++|+.||................. .. ....++...
T Consensus       178 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (303)
T 2vwi_A          178 TRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEML  257 (303)
T ss_dssp             ----------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCC
T ss_pred             cchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhh
Confidence                   23578899999964   3457899999999999999999999986544332222111111 00 111111111


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          257 GSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       257 ~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ...    ...+.+++.+||+.||++|||+.++++
T Consensus       258 ~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          258 KKY----GKSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             CCC----CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             hhh----hHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            222    235566777999999999999999985

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.1e-39  Score=292.46  Aligned_cols=233  Identities=21%  Similarity=0.250  Sum_probs=184.0

Q ss_pred             cccccCCCceEEEEEE----cCCcEEEEEEecccc-----ccHHHHHHHHHHHccC-CCCCcceEeeeEe-CCeeEEEEe
Q 021659           44 RIVYTNSHGAAYKARF----QDGEVALVKEIQALN-----LEKDAFYREIQLLGRL-HHRHLLALQGFST-GRKRLLVFD  112 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~----~~~~~va~K~~~~~~-----~~~~~~~~ei~~l~~l-~h~niv~~~~~~~-~~~~~lv~e  112 (309)
                      +.||+|+||.||+++.    .+++.||+|++....     ...+.+.+|+++++++ +||||+++++++. +...++|||
T Consensus        60 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e  139 (355)
T 1vzo_A           60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILD  139 (355)
T ss_dssp             EEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEEC
T ss_pred             EEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEee
Confidence            5899999999999997    368999999985432     2345677899999999 6999999999765 477889999


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc----
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----  188 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----  188 (309)
                      |+++++|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....    
T Consensus       140 ~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~  214 (355)
T 1vzo_A          140 YINGGELFTHLSQ--RERFTEHEVQIYVGEIVLALEHL---HKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADET  214 (355)
T ss_dssp             CCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGG
T ss_pred             cCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccCCC
Confidence            9999999999976  46799999999999999999999   77799999999999999999999999999986432    


Q ss_pred             ----ccCCCCCCCCCCCCCC----CCCCCcEeehhhHHHHHHhCCCCCCCCc---cHHHHHHHhcccccccccccCcCCC
Q 021659          189 ----NYATMPHSSCPEDCST----QDCSNIIFQLGVLILELVTGQSPEEGDV---DLIQWIQESSISSSIHRMIDPDLGG  257 (309)
Q Consensus       189 ----~~~~~~~~~~PE~~~~----~~~~~Dv~slG~~l~~l~tg~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~  257 (309)
                          ...+|+.|+|||...+    .+.++||||||+++|+|++|+.||....   ............       .+....
T Consensus       215 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~-------~~~~~~  287 (355)
T 1vzo_A          215 ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKS-------EPPYPQ  287 (355)
T ss_dssp             GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHC-------CCCCCT
T ss_pred             CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhcc-------CCCCCc
Confidence                2368899999997543    3678999999999999999999997432   111111111100       111111


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCC-----ChHHHHHHH
Q 021659          258 SYDSKELKKLLAVARLCIKTKDKPTI-----SIPQISRYL  292 (309)
Q Consensus       258 ~~~~~~~~~l~~l~~~cl~~dp~~Rp-----s~~evl~~L  292 (309)
                      ..    ...+.+++.+||..||++||     ++.|+++..
T Consensus       288 ~~----~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~  323 (355)
T 1vzo_A          288 EM----SALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL  323 (355)
T ss_dssp             TS----CHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred             cc----CHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence            22    23455677799999999999     899998644

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=4.8e-39  Score=292.91  Aligned_cols=239  Identities=14%  Similarity=0.167  Sum_probs=178.6

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC------------------
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG------------------  104 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~------------------  104 (309)
                      +.||+|+||.||+|.. .+++.||+|++.....   ...+|+++++.++||||+++++++..                  
T Consensus        13 ~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~   89 (383)
T 3eb0_A           13 KTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR---YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKL   89 (383)
T ss_dssp             EEEECC-CEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHTTCCCTTBCCEEEEEEEC-----------------
T ss_pred             EEEEeccCEEEEEEEECCCCCEEEEEEEecCcc---hHHHHHHHHHHcCCCCccchhheeeecCcccccccccccccccc
Confidence            6899999999999997 5689999998854332   23479999999999999999997621                  


Q ss_pred             ---------------------CeeEEEEeeCCCCCHHHhhcC--CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeec
Q 021659          105 ---------------------RKRLLVFDNIENGSLKEHLND--PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYV  161 (309)
Q Consensus       105 ---------------------~~~~lv~e~~~~~sL~~~i~~--~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~  161 (309)
                                           ...++||||+++ +|.+.+..  .....+++..+..++.|++.||.||   |+.+++||
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~gi~H~  165 (383)
T 3eb0_A           90 GGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI---HSLGICHR  165 (383)
T ss_dssp             --------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH---HTTTEECS
T ss_pred             cccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCcCccC
Confidence                                 236799999985 87776642  1257899999999999999999999   78899999


Q ss_pred             ccCCCceeeC-CCCceeEeccccccccc------ccCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCC
Q 021659          162 SISSSSIMLD-ENFTAKLSDVGFFNSVR------NYATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGD  231 (309)
Q Consensus       162 dl~p~nill~-~~~~~kl~dfg~~~~~~------~~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~  231 (309)
                      ||||+||+++ .++.+||+|||++....      ...+++.|+|||...   ..+.++|||||||++++|++|+.||.+.
T Consensus       166 Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  245 (383)
T 3eb0_A          166 DIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGE  245 (383)
T ss_dssp             CCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCC
Confidence            9999999997 68899999999987542      345778899999643   3578899999999999999999999876


Q ss_pred             ccHHHHHHHhcccc------------cccccccCcCCCC-----CCHHHHHHHHHHHHHccCCCCCCCCChHHHH
Q 021659          232 VDLIQWIQESSISS------------SIHRMIDPDLGGS-----YDSKELKKLLAVARLCIKTKDKPTISIPQIS  289 (309)
Q Consensus       232 ~~~~~~~~~~~~~~------------~~~~~~~~~l~~~-----~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl  289 (309)
                      .............+            ......-+.....     ........+.+++.+||+.||++|||+.|++
T Consensus       246 ~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l  320 (383)
T 3eb0_A          246 TSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAM  320 (383)
T ss_dssp             SHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred             ChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence            55443322211000            0000000111000     0011124466777799999999999999998

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=2e-38  Score=282.67  Aligned_cols=237  Identities=15%  Similarity=0.192  Sum_probs=181.4

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccCC-CCCcceEeeeEeC---CeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRLH-HRHLLALQGFSTG---RKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~-h~niv~~~~~~~~---~~~~lv~e~~~~~s  118 (309)
                      +.||+|+||.||+|.. .+++.||+|++..  ...+.+.+|++++++++ ||||+++++++.+   ...++||||+++++
T Consensus        42 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~  119 (330)
T 3nsz_A           42 RKLGRGKYSEVFEAINITNNEKVVVKILKP--VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD  119 (330)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECS--CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCCC
T ss_pred             EEecccCCeEEEEEEECCCCcEEEEEEecc--cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCchh
Confidence            5899999999999986 5688999999863  34577999999999997 9999999998764   46789999999999


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCC-ceeEeccccccccc------ccC
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENF-TAKLSDVGFFNSVR------NYA  191 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~-~~kl~dfg~~~~~~------~~~  191 (309)
                      |.+++..     +++..+..++.|++.||.||   |+.+++||||||+||+++.++ .+||+|||++....      ...
T Consensus       120 l~~~~~~-----~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~  191 (330)
T 3nsz_A          120 FKQLYQT-----LTDYDIRFYMYEILKALDYC---HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV  191 (330)
T ss_dssp             HHHHGGG-----CCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCC
T ss_pred             HHHHHHh-----CCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCcccccc
Confidence            9999853     88999999999999999999   778999999999999999776 89999999986443      335


Q ss_pred             CCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhc---cccccc---------------cc
Q 021659          192 TMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESS---ISSSIH---------------RM  250 (309)
Q Consensus       192 ~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~---~~~~~~---------------~~  250 (309)
                      ++..|.|||...   ..+.++||||||+++++|++|+.||.........+....   ......               ..
T Consensus       192 ~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (330)
T 3nsz_A          192 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI  271 (330)
T ss_dssp             SCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHH
T ss_pred             ccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhh
Confidence            678899999643   357889999999999999999999954432221111100   000000               00


Q ss_pred             cc--------CcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          251 ID--------PDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       251 ~~--------~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ..        ..............+.+++.+||+.||++|||+.|+++
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          272 LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             HCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             hhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            00        00000001112345667777999999999999999986

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=6e-39  Score=279.93  Aligned_cols=230  Identities=13%  Similarity=0.207  Sum_probs=181.5

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccc---cccHHHHHHHHHHHccC-CCCCcceEeeeEe-CCeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQAL---NLEKDAFYREIQLLGRL-HHRHLLALQGFST-GRKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~---~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~-~~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||+|... +++.||+|.+...   ......+.+|+..+.++ +||||+++++++. +...++||||++++
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~   96 (289)
T 1x8b_A           17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGG   96 (289)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred             hhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCCC
Confidence            68999999999999975 6899999998643   22345788999999999 8999999999775 47788999999999


Q ss_pred             CHHHhhcCCC--CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC-------------------Cce
Q 021659          118 SLKEHLNDPL--KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN-------------------FTA  176 (309)
Q Consensus       118 sL~~~i~~~~--~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~-------------------~~~  176 (309)
                      +|.+++....  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.+                   ..+
T Consensus        97 ~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (289)
T 1x8b_A           97 SLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI---HSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMF  173 (289)
T ss_dssp             BHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEC--------------------CCCE
T ss_pred             cHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHH---HhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEE
Confidence            9999997521  26799999999999999999999   77899999999999999844                   479


Q ss_pred             eEeccccccccc---ccCCCCCCCCCCCCCCC---CCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccccccc
Q 021659          177 KLSDVGFFNSVR---NYATMPHSSCPEDCSTQ---DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRM  250 (309)
Q Consensus       177 kl~dfg~~~~~~---~~~~~~~~~~PE~~~~~---~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~  250 (309)
                      ||+|||.+....   ...+++.|.|||.....   ++++||||||+++++|++|.+|+........ +..    ...   
T Consensus       174 kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~-~~~----~~~---  245 (289)
T 1x8b_A          174 KIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHE-IRQ----GRL---  245 (289)
T ss_dssp             EECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHH-HHT----TCC---
T ss_pred             EEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHH-HHc----CCC---
Confidence            999999987554   23578899999975432   4689999999999999999988765433222 111    111   


Q ss_pred             ccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          251 IDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       251 ~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                        +.++...    ...+.+++.+||+.||++|||+.|+++
T Consensus       246 --~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          246 --PRIPQVL----SQEFTELLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             --CCCSSCC----CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             --CCCCccc----CHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence              1122122    234566677999999999999999985

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=1.5e-38  Score=288.49  Aligned_cols=239  Identities=14%  Similarity=0.187  Sum_probs=178.9

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeCC-------eeEEEEe
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTGR-------KRLLVFD  112 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~~-------~~~lv~e  112 (309)
                      +.||+|+||.||+|.. .+++.||+|++.....   ..+.+.+|+.+++.++||||+++++++...       ..++|||
T Consensus        31 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e  110 (371)
T 2xrw_A           31 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME  110 (371)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEE
T ss_pred             eeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEEE
Confidence            5899999999999996 4588999999864322   235688999999999999999999987542       5789999


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc----
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----  188 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----  188 (309)
                      |+++ +|.+.+.    ..+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....    
T Consensus       111 ~~~~-~l~~~~~----~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~  182 (371)
T 2xrw_A          111 LMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM  182 (371)
T ss_dssp             CCSE-EHHHHHH----SCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTSCEEECCCCC---------
T ss_pred             cCCC-CHHHHHh----hccCHHHHHHHHHHHHHHHHHH---HHCCeecccCCHHHEEEcCCCCEEEEEeecccccccccc
Confidence            9986 8888885    3489999999999999999999   77899999999999999999999999999986543    


Q ss_pred             --ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccc-ccccc------------
Q 021659          189 --NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSS-IHRMI------------  251 (309)
Q Consensus       189 --~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~------------  251 (309)
                        ...+|+.|+|||...+  .+.++|||||||++|+|++|+.||.+......+.......+. .++..            
T Consensus       183 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  262 (371)
T 2xrw_A          183 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE  262 (371)
T ss_dssp             -------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHH
T ss_pred             cCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHh
Confidence              3467889999996443  578999999999999999999999876554433222111000 00000            


Q ss_pred             -cCcC-------------CCCC---CHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          252 -DPDL-------------GGSY---DSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       252 -~~~l-------------~~~~---~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                       .+..             ....   .......+.+++.+||+.||++|||+.|+++
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  318 (371)
T 2xrw_A          263 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ  318 (371)
T ss_dssp             SSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             hCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence             0000             0000   1122456778888999999999999999985

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=1.6e-38  Score=300.15  Aligned_cols=232  Identities=16%  Similarity=0.254  Sum_probs=183.7

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||+++.. +++.||+|++....    ...+.+.+|+.++++++||||+++++++.+ ...|+||||+++|
T Consensus       191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg  270 (543)
T 3c4z_A          191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGG  270 (543)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred             EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCC
Confidence            47999999999999974 58999999995432    234678899999999999999999997654 7788999999999


Q ss_pred             CHHHhhcCCC--CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------
Q 021659          118 SLKEHLNDPL--KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------  188 (309)
Q Consensus       118 sL~~~i~~~~--~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------  188 (309)
                      +|.+++....  ...+++..+..++.|++.||.||   |+.+|+||||||+||+++.++.+||+|||++....       
T Consensus       271 ~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~L---H~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~~~  347 (543)
T 3c4z_A          271 DIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL---HQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK  347 (543)
T ss_dssp             BHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCCBC
T ss_pred             CHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHH---HHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCcccc
Confidence            9999987532  45799999999999999999999   77899999999999999999999999999986442       


Q ss_pred             ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCcc---HHHHHHHhcccccccccccCcCCCCCCHHH
Q 021659          189 NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVD---LIQWIQESSISSSIHRMIDPDLGGSYDSKE  263 (309)
Q Consensus       189 ~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  263 (309)
                      ...+|+.|+|||...+  ++.++|+|||||++|+|++|+.||.....   ......... ...      ...+...    
T Consensus       348 ~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~-~~~------~~~p~~~----  416 (543)
T 3c4z_A          348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVL-EQA------VTYPDKF----  416 (543)
T ss_dssp             CCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHH-HCC------CCCCTTS----
T ss_pred             cccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHh-hcc------cCCCccc----
Confidence            2378899999996543  57889999999999999999999976421   111111111 000      1111111    


Q ss_pred             HHHHHHHHHHccCCCCCCCCCh-----HHHH
Q 021659          264 LKKLLAVARLCIKTKDKPTISI-----PQIS  289 (309)
Q Consensus       264 ~~~l~~l~~~cl~~dp~~Rps~-----~evl  289 (309)
                      ...+.+++.+||+.||++||++     .+++
T Consensus       417 s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~  447 (543)
T 3c4z_A          417 SPASKDFCEALLQKDPEKRLGFRDGSCDGLR  447 (543)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCCBTTBSHHHH
T ss_pred             CHHHHHHHHHhccCCHhHCCCCcccCHHHHH
Confidence            2345566669999999999975     5666

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=5.8e-39  Score=290.80  Aligned_cols=240  Identities=16%  Similarity=0.182  Sum_probs=169.0

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC-------CeeEEEEe
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG-------RKRLLVFD  112 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~-------~~~~lv~e  112 (309)
                      +.||+|+||.||+|.. .+++.||+|++.....   ..+.+.+|++++++++||||+++++++..       ...++|+|
T Consensus        35 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e  114 (367)
T 2fst_X           35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH  114 (367)
T ss_dssp             EECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEE
T ss_pred             eEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEec
Confidence            5899999999999996 5688999999854322   34578899999999999999999997743       44689999


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc----
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----  188 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----  188 (309)
                      ++ +++|.+++..   ..+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....    
T Consensus       115 ~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~L---H~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~  187 (367)
T 2fst_X          115 LM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT  187 (367)
T ss_dssp             CC-CEECC--------CCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTCCEEECC------------
T ss_pred             cc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCCHhhEEECCCCCEEEeeccccccccccCC
Confidence            98 5799998864   6799999999999999999999   77899999999999999999999999999987543    


Q ss_pred             ccCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccc-----ccc--------ccc
Q 021659          189 NYATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSS-----IHR--------MID  252 (309)
Q Consensus       189 ~~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~-----~~~--------~~~  252 (309)
                      ...+|..|.|||...   ..+.++|||||||++++|++|+.||.+.....+........+.     ...        .+.
T Consensus       188 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~  267 (367)
T 2fst_X          188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ  267 (367)
T ss_dssp             ---CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHH
T ss_pred             CcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHh
Confidence            346789999999643   3578999999999999999999999876544332211110000     000        000


Q ss_pred             CcCC-CCCCH-----HHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          253 PDLG-GSYDS-----KELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       253 ~~l~-~~~~~-----~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .... .....     .....+.+++.+||..||++|||+.|+++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~  311 (367)
T 2fst_X          268 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  311 (367)
T ss_dssp             TSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence            0000 00000     01244566777999999999999999985

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=6e-39  Score=286.01  Aligned_cols=243  Identities=16%  Similarity=0.212  Sum_probs=185.2

Q ss_pred             ccccccCCCceEEEEEE------cCCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEee
Q 021659           43 HRIVYTNSHGAAYKARF------QDGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~------~~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      .+.||+|+||.||+|++      .++..||+|.+....  .....+.+|+.++++++||||+++++++.+ ...++||||
T Consensus        35 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  114 (327)
T 2yfx_A           35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMEL  114 (327)
T ss_dssp             EEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             EEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEec
Confidence            36899999999999983      356789999985332  234578899999999999999999998765 567899999


Q ss_pred             CCCCCHHHhhcCCC-----CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC---CCceeEecccccc
Q 021659          114 IENGSLKEHLNDPL-----KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE---NFTAKLSDVGFFN  185 (309)
Q Consensus       114 ~~~~sL~~~i~~~~-----~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~---~~~~kl~dfg~~~  185 (309)
                      +++++|.+++....     ...+++..++.++.+++.||.||   |+.+++||||||+||+++.   +..+||+|||++.
T Consensus       115 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~L---H~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~  191 (327)
T 2yfx_A          115 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL---EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR  191 (327)
T ss_dssp             CTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHH
T ss_pred             CCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHH---hhCCeecCcCCHhHEEEecCCCcceEEECcccccc
Confidence            99999999997532     24589999999999999999999   7789999999999999984   4469999999875


Q ss_pred             cc---------cccCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccC
Q 021659          186 SV---------RNYATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDP  253 (309)
Q Consensus       186 ~~---------~~~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (309)
                      ..         ....+++.|+|||..  ...+.++||||||+++|+|++ |..||....... ....... ..     .+
T Consensus       192 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~~~~-~~-----~~  264 (327)
T 2yfx_A          192 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE-VLEFVTS-GG-----RM  264 (327)
T ss_dssp             HHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-HHHHHHT-TC-----CC
T ss_pred             ccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHH-HHHHHhc-CC-----CC
Confidence            32         123456789999964  335788999999999999998 999997653321 1111111 10     01


Q ss_pred             cCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccc
Q 021659          254 DLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQ  299 (309)
Q Consensus       254 ~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~  299 (309)
                      ......    ...+.+++.+||..||++|||+.++++.|+...+-.
T Consensus       265 ~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~  306 (327)
T 2yfx_A          265 DPPKNC----PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP  306 (327)
T ss_dssp             CCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred             CCCCCC----CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence            111112    235666777999999999999999999998765533

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=9.7e-39  Score=284.99  Aligned_cols=243  Identities=13%  Similarity=0.139  Sum_probs=186.3

Q ss_pred             cccccCCCceEEEEEE--cCCcEEEEEEeccccccHHHHHHHHHHHccCCCC------CcceEeeeEe-CCeeEEEEeeC
Q 021659           44 RIVYTNSHGAAYKARF--QDGEVALVKEIQALNLEKDAFYREIQLLGRLHHR------HLLALQGFST-GRKRLLVFDNI  114 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~--~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~------niv~~~~~~~-~~~~~lv~e~~  114 (309)
                      +.||+|+||.||++..  .+++.||+|++.......+.+.+|+++++.++|+      +++++++++. +...++||||+
T Consensus        20 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~   99 (339)
T 1z57_A           20 DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL   99 (339)
T ss_dssp             EEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEECC
T ss_pred             EEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcCC
Confidence            6899999999999986  3678999999976555567788999999988654      4899999765 47888999999


Q ss_pred             CCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC-------------------CCc
Q 021659          115 ENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE-------------------NFT  175 (309)
Q Consensus       115 ~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~-------------------~~~  175 (309)
                       +++|.+++.......+++..+..++.|++.||.||   |+.+++||||||+||+++.                   ++.
T Consensus       100 -~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~  175 (339)
T 1z57_A          100 -GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFL---HSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPD  175 (339)
T ss_dssp             -CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCC
T ss_pred             -CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHH---HHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCC
Confidence             77999999765456799999999999999999999   7789999999999999987                   667


Q ss_pred             eeEeccccccccc----ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccc
Q 021659          176 AKLSDVGFFNSVR----NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHR  249 (309)
Q Consensus       176 ~kl~dfg~~~~~~----~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~  249 (309)
                      +||+|||++....    ...+|+.|+|||...  ..+.++||||||+++|+|++|..||................+..+.
T Consensus       176 ~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~  255 (339)
T 1z57_A          176 IKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPK  255 (339)
T ss_dssp             EEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCH
T ss_pred             ceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence            9999999987543    346788999999643  3478899999999999999999999865433211110000000000


Q ss_pred             ----------c---------------------ccCcC-CCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          250 ----------M---------------------IDPDL-GGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       250 ----------~---------------------~~~~l-~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                                .                     ..+.. ...........+.+++.+||+.||++|||+.|+++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  328 (339)
T 1z57_A          256 HMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK  328 (339)
T ss_dssp             HHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhc
Confidence                      0                     00000 00112234567778888999999999999999984

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=3.7e-38  Score=291.52  Aligned_cols=179  Identities=16%  Similarity=0.214  Sum_probs=152.4

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC------CeeEEEEee
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG------RKRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~------~~~~lv~e~  113 (309)
                      +.||+|+||.||+|.. .+++.||+|++.....   ..+++.+|++++++++||||+++++++..      ...|+||||
T Consensus        32 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~  111 (432)
T 3n9x_A           32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEI  111 (432)
T ss_dssp             EEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEEC
T ss_pred             EEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEec
Confidence            6899999999999997 4578999999964322   24578899999999999999999997743      357899999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc------
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV------  187 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~------  187 (309)
                      +++ +|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++...      
T Consensus       112 ~~~-~L~~~~~~--~~~l~~~~~~~i~~qil~aL~~L---H~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~  185 (432)
T 3n9x_A          112 ADS-DLKKLFKT--PIFLTEEHIKTILYNLLLGENFI---HESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDT  185 (432)
T ss_dssp             CSE-EHHHHHHS--SCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC------
T ss_pred             CCc-CHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHH---HHCCCCCCCCCHHHeEECCCCCEEEccCCCcccccccccc
Confidence            875 99999987  57799999999999999999999   7779999999999999999999999999998643      


Q ss_pred             -----------------------cccCCCCCCCCCCCC---CCCCCCCcEeehhhHHHHHHhCCCCC
Q 021659          188 -----------------------RNYATMPHSSCPEDC---STQDCSNIIFQLGVLILELVTGQSPE  228 (309)
Q Consensus       188 -----------------------~~~~~~~~~~~PE~~---~~~~~~~Dv~slG~~l~~l~tg~~p~  228 (309)
                                             ....+|+.|.|||..   ..++.++|||||||+++||++|..||
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~  252 (432)
T 3n9x_A          186 NIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH  252 (432)
T ss_dssp             -------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred             cccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence                                   234678899999953   33578899999999999999854443

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=2e-38  Score=287.65  Aligned_cols=240  Identities=15%  Similarity=0.202  Sum_probs=181.2

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccccc---HHHHHHHHHHHccCCCCCcceEeeeEeC-Ce------eEEEEe
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLE---KDAFYREIQLLGRLHHRHLLALQGFSTG-RK------RLLVFD  112 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~------~~lv~e  112 (309)
                      +.||+|+||.||+|.. .+++.||+|++......   .+.+.+|+.++++++||||+++++++.. ..      .++|||
T Consensus        48 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e  127 (371)
T 4exu_A           48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMP  127 (371)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEE
T ss_pred             eEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEEc
Confidence            5799999999999997 46899999999653332   3578899999999999999999998764 22      389999


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc----
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----  188 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----  188 (309)
                      |+.+ +|.+.+.    ..+++..+..++.+++.||.||   |+.+++||||||+||+++.++.+||+|||++....    
T Consensus       128 ~~~~-~l~~~~~----~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~  199 (371)
T 4exu_A          128 FMQT-DLQKIMG----MEFSEEKIQYLVYQMLKGLKYI---HSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMT  199 (371)
T ss_dssp             CCCE-EHHHHTT----SCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTCCEEECSTTCC--------
T ss_pred             cccc-cHHHHhh----cCCCHHHHHHHHHHHHHHHHHH---HHCCCcCCCcCHHHeEECCCCCEEEEecCcccccccCcC
Confidence            9984 8988874    3499999999999999999999   77799999999999999999999999999986543    


Q ss_pred             ccCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccc-cccc------------c
Q 021659          189 NYATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSI-HRMI------------D  252 (309)
Q Consensus       189 ~~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~------------~  252 (309)
                      ...+|+.|+|||...   ..+.++||||||+++++|++|+.||.+..............+.. .+..            .
T Consensus       200 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  279 (371)
T 4exu_A          200 GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQ  279 (371)
T ss_dssp             CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHH
T ss_pred             CcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhh
Confidence            346789999999643   35789999999999999999999998765433222211100000 0000            0


Q ss_pred             --CcCCCCC----CHHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          253 --PDLGGSY----DSKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       253 --~~l~~~~----~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                        +......    .......+.+++.+||+.||++|||+.|+++.
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  324 (371)
T 4exu_A          280 SLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  324 (371)
T ss_dssp             HSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             ccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence              0000000    00113456677779999999999999999853

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=1.7e-38  Score=286.39  Aligned_cols=256  Identities=14%  Similarity=0.137  Sum_probs=178.2

Q ss_pred             HHHHHhhcccc--cccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-C---
Q 021659           33 KDIKMATDGFH--RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-R---  105 (309)
Q Consensus        33 ~~i~~~~~~~~--~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~---  105 (309)
                      +......++|.  +.||+|+||.||+|.. .+++.||+|++............++..+..++||||+++++++.. .   
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~   95 (360)
T 3e3p_A           16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD   95 (360)
T ss_dssp             HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred             hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence            34445556665  6899999999999997 458899999986555555567788888999999999999997642 1   


Q ss_pred             ----eeEEEEeeCCCCCHHHhhcC--CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC-CCceeE
Q 021659          106 ----KRLLVFDNIENGSLKEHLND--PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE-NFTAKL  178 (309)
Q Consensus       106 ----~~~lv~e~~~~~sL~~~i~~--~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~-~~~~kl  178 (309)
                          ..++||||+++ +|.+.+..  .....+++..+..++.+++.||.|||. |+.+++||||||+||+++. ++.+||
T Consensus        96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~~~ivH~Dlkp~NIll~~~~~~~kl  173 (360)
T 3e3p_A           96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHL-PSVNVCHRDIKPHNVLVNEADGTLKL  173 (360)
T ss_dssp             TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTS-TTTCCBCSCCCGGGEEEETTTTEEEE
T ss_pred             ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhC-CCCCeecCcCCHHHEEEeCCCCcEEE
Confidence                26799999987 55443321  125778999999999999999999942 3999999999999999996 899999


Q ss_pred             eccccccccc------ccCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccc----
Q 021659          179 SDVGFFNSVR------NYATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISS----  245 (309)
Q Consensus       179 ~dfg~~~~~~------~~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~----  245 (309)
                      +|||++....      ...+|+.|+|||...   ..+.++||||||+++|+|++|+.||.+..............+    
T Consensus       174 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~  253 (360)
T 3e3p_A          174 CDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSR  253 (360)
T ss_dssp             CCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCH
T ss_pred             eeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCH
Confidence            9999987543      235678899999642   257899999999999999999999987654332221111000    


Q ss_pred             ----------cccccccCc------CCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          246 ----------SIHRMIDPD------LGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       246 ----------~~~~~~~~~------l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                                ......+..      ............+.+++.+||+.||++|||+.|+++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  314 (360)
T 3e3p_A          254 EVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC  314 (360)
T ss_dssp             HHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence                      000000000      000111112456777777999999999999999985

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=8.5e-39  Score=291.69  Aligned_cols=243  Identities=15%  Similarity=0.101  Sum_probs=184.8

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccCC--------CCCcceEeeeEe----C-CeeEE
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRLH--------HRHLLALQGFST----G-RKRLL  109 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~--------h~niv~~~~~~~----~-~~~~l  109 (309)
                      +.||+|+||.||+|+. .+++.||+|++.......+.+.+|++++++++        |+||+++++++.    + ...++
T Consensus        43 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~l  122 (397)
T 1wak_A           43 RKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICM  122 (397)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEE
T ss_pred             EEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEE
Confidence            5899999999999996 45889999999765555677899999999885        788999999664    2 46789


Q ss_pred             EEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCC-CeeecccCCCceeeCCCC--------------
Q 021659          110 VFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNL-PMYYVSISSSSIMLDENF--------------  174 (309)
Q Consensus       110 v~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~-~i~H~dl~p~nill~~~~--------------  174 (309)
                      ||||+. ++|.+.+.......+++..+..++.|++.||.||   |++ +++||||||+||+++.++              
T Consensus       123 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~l---H~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~  198 (397)
T 1wak_A          123 VFEVLG-HHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYL---HTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQ  198 (397)
T ss_dssp             EECCCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHH---HHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---
T ss_pred             EEeccC-ccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH---HHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHh
Confidence            999994 4776666544456799999999999999999999   666 999999999999999775              


Q ss_pred             -----------------------------------ceeEeccccccccc----ccCCCCCCCCCCCCCC--CCCCCcEee
Q 021659          175 -----------------------------------TAKLSDVGFFNSVR----NYATMPHSSCPEDCST--QDCSNIIFQ  213 (309)
Q Consensus       175 -----------------------------------~~kl~dfg~~~~~~----~~~~~~~~~~PE~~~~--~~~~~Dv~s  213 (309)
                                                         .+||+|||++....    ...+|+.|+|||...+  .+.++||||
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diws  278 (397)
T 1wak_A          199 RSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWS  278 (397)
T ss_dssp             ------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHHHHHH
T ss_pred             hcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHHHHHH
Confidence                                               79999999986543    3467889999996433  578899999


Q ss_pred             hhhHHHHHHhCCCCCCCCcc------HHH--HHHHhcccc-------------------cccccccCcC---------CC
Q 021659          214 LGVLILELVTGQSPEEGDVD------LIQ--WIQESSISS-------------------SIHRMIDPDL---------GG  257 (309)
Q Consensus       214 lG~~l~~l~tg~~p~~~~~~------~~~--~~~~~~~~~-------------------~~~~~~~~~l---------~~  257 (309)
                      |||++|+|++|+.||.+...      ...  .+.......                   ....+.+...         ..
T Consensus       279 lG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  358 (397)
T 1wak_A          279 TACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKY  358 (397)
T ss_dssp             HHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTS
T ss_pred             HHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhc
Confidence            99999999999999975321      111  111000000                   0000000000         01


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          258 SYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       258 ~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .........+.+++.+||+.||++|||+.|+++
T Consensus       359 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          359 EWSQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             CCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             ccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence            234566778889999999999999999999985

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=5.6e-38  Score=274.62  Aligned_cols=236  Identities=16%  Similarity=0.202  Sum_probs=184.4

Q ss_pred             cccccccCCCceEEEEEEc-CCcEEEEEEecccc---ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           42 FHRIVYTNSHGAAYKARFQ-DGEVALVKEIQALN---LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~---~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      +.+.||+|++|.||+|... +++.||+|++....   ...+.+.+|++++++++||||+++++++.+ ...++|+||+++
T Consensus        26 i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  105 (287)
T 2wei_A           26 IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTG  105 (287)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             eeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCC
Confidence            3468999999999999975 68899999985432   345788999999999999999999998765 677899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC---CceeEeccccccccccc---
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN---FTAKLSDVGFFNSVRNY---  190 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~---~~~kl~dfg~~~~~~~~---  190 (309)
                      ++|.+++..  ...+++..++.++.+++.||.+|   |+.+++|+||+|+||+++.+   +.+||+|||++......   
T Consensus       106 ~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~L---H~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~  180 (287)
T 2wei_A          106 GELFDEIIK--RKRFSEHDAARIIKQVFSGITYM---HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM  180 (287)
T ss_dssp             CBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSC
T ss_pred             CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCcc
Confidence            999998865  46799999999999999999999   77899999999999999754   46999999998754322   


Q ss_pred             ---CCCCCCCCCCCCCC-CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          191 ---ATMPHSSCPEDCST-QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       191 ---~~~~~~~~PE~~~~-~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                         .+++.|.|||...+ .+.++||||||+++++|++|..||.+..... ....... +... ...+.. ...    ...
T Consensus       181 ~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~-~~~~-~~~~~~-~~~----~~~  252 (287)
T 2wei_A          181 KDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYD-ILKRVET-GKYA-FDLPQW-RTI----SDD  252 (287)
T ss_dssp             SCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH-CCCC-CCSGGG-TTS----CHH
T ss_pred             ccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHc-CCCC-CCchhh-hhc----CHH
Confidence               35678999996443 4788999999999999999999997654322 1111111 1000 000000 111    234


Q ss_pred             HHHHHHHccCCCCCCCCChHHHHH
Q 021659          267 LLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      +.+++.+||..||++|||+.|+++
T Consensus       253 ~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          253 AKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHcccChhhCcCHHHHhc
Confidence            566777999999999999999986

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=1.4e-38  Score=291.85  Aligned_cols=183  Identities=22%  Similarity=0.228  Sum_probs=145.1

Q ss_pred             cccccCCCceEEEEEEc---CCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEe---CCeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ---DGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFST---GRKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~---~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~---~~~~~lv~e~~~~~  117 (309)
                      ++||+|+||.||+|+..   +++.||+|.+.... ....+.+|++++++++||||+++++++.   +...++||||+.+ 
T Consensus        27 ~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~~-  104 (405)
T 3rgf_A           27 CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG-ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-  104 (405)
T ss_dssp             CCCC-----EEEEEEESSSSCCCCEEEEECSSSS-CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCSE-
T ss_pred             cEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC-CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCCC-
Confidence            47999999999999964   57889999986543 3456889999999999999999999773   3678899999976 


Q ss_pred             CHHHhhcC-------CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceee----CCCCceeEeccccccc
Q 021659          118 SLKEHLND-------PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIML----DENFTAKLSDVGFFNS  186 (309)
Q Consensus       118 sL~~~i~~-------~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill----~~~~~~kl~dfg~~~~  186 (309)
                      +|.+++..       .....+++..+..++.|++.||.||   |+.+|+||||||+||++    +.++.+||+|||++..
T Consensus       105 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~L---H~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~  181 (405)
T 3rgf_A          105 DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYL---HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL  181 (405)
T ss_dssp             EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC-
T ss_pred             CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHH---HhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCcee
Confidence            88877742       1234599999999999999999999   77899999999999999    6778999999999865


Q ss_pred             cc----------ccCCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCC
Q 021659          187 VR----------NYATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGD  231 (309)
Q Consensus       187 ~~----------~~~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~  231 (309)
                      ..          ...+|+.|+|||...+   .+.++|||||||++|+|++|+.||.+.
T Consensus       182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~  239 (405)
T 3rgf_A          182 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  239 (405)
T ss_dssp             ---------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred             cCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence            43          2357889999996543   578899999999999999999999654

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=2.5e-38  Score=307.14  Aligned_cols=229  Identities=18%  Similarity=0.228  Sum_probs=184.4

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccc----cccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQAL----NLEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~----~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||+++.. +++.||+|++...    ....+.+..|..++..+ +||||+.+++++.+ ...|+||||+++
T Consensus       347 ~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~g  426 (674)
T 3pfq_A          347 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNG  426 (674)
T ss_dssp             EESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCCS
T ss_pred             EEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcCC
Confidence            58999999999999974 5789999998542    23446788999999988 69999999997765 778899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc-------cc
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-------RN  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-------~~  189 (309)
                      |+|.+++..  ...+++..+..++.|++.||.||   |+.+|+||||||+|||++.++.+||+|||+++..       ..
T Consensus       427 g~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~L---H~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~  501 (674)
T 3pfq_A          427 GDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFL---QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKT  501 (674)
T ss_dssp             CBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHH---HHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCCBCC
T ss_pred             CcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCCccccc
Confidence            999999976  46799999999999999999999   7789999999999999999999999999998742       23


Q ss_pred             cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          190 YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       190 ~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ..+|+.|+|||...  .++.++|+||||+++|||++|+.||.+..............        ...+...    ..++
T Consensus       502 ~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~--------~~~p~~~----s~~~  569 (674)
T 3pfq_A          502 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN--------VAYPKSM----SKEA  569 (674)
T ss_dssp             CCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSC--------CCCCTTS----CHHH
T ss_pred             ccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC--------CCCCccC----CHHH
Confidence            46899999999643  45789999999999999999999998754332221111111        1111111    2345


Q ss_pred             HHHHHHccCCCCCCCCCh-----HHHH
Q 021659          268 LAVARLCIKTKDKPTISI-----PQIS  289 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~-----~evl  289 (309)
                      .+++.+||+.||++||++     .||+
T Consensus       570 ~~li~~lL~~dP~~R~~~~~~~~~ei~  596 (674)
T 3pfq_A          570 VAICKGLMTKHPGKRLGCGPEGERDIK  596 (674)
T ss_dssp             HHHHHHHSCSSSTTCTTCSTTHHHHHH
T ss_pred             HHHHHHHccCCHHHCCCCCCCcHHHHh
Confidence            566669999999999998     6666

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=1.7e-38  Score=293.44  Aligned_cols=187  Identities=17%  Similarity=0.161  Sum_probs=159.1

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccccHHHHHHHHHHHccC------CCCCcceEeeeEe-CCeeEEEEeeCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLEKDAFYREIQLLGRL------HHRHLLALQGFST-GRKRLLVFDNIE  115 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~~~~~~~ei~~l~~l------~h~niv~~~~~~~-~~~~~lv~e~~~  115 (309)
                      +.||+|+||.||+|... +++.||+|++.......+.+.+|+.+++.+      +|+||+.+++++. ....++||||+.
T Consensus       103 ~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~  182 (429)
T 3kvw_A          103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLS  182 (429)
T ss_dssp             EEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCCC
T ss_pred             EEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEeccC
Confidence            58999999999999874 588999999976555556778888888776      4779999999775 478889999997


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCc--eeEeccccccccc----c
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFT--AKLSDVGFFNSVR----N  189 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~--~kl~dfg~~~~~~----~  189 (309)
                       ++|.+++.......+++..+..++.|++.||.||   |+.+|+||||||+||+++.++.  +||+|||++....    .
T Consensus       183 -~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~~~~  258 (429)
T 3kvw_A          183 -MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDAL---HKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYT  258 (429)
T ss_dssp             -CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH---HHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTCCCCS
T ss_pred             -CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEEccCCCcceEEeecccceecCCcccc
Confidence             4999998765556799999999999999999999   6679999999999999999887  9999999986443    3


Q ss_pred             cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccH
Q 021659          190 YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDL  234 (309)
Q Consensus       190 ~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~  234 (309)
                      ..+|+.|+|||...  ..+.++|||||||++|+|++|+.||.+....
T Consensus       259 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~  305 (429)
T 3kvw_A          259 YIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEG  305 (429)
T ss_dssp             SCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             cCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHH
Confidence            46788999999643  3578999999999999999999999876543

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=2e-39  Score=294.90  Aligned_cols=226  Identities=15%  Similarity=0.116  Sum_probs=170.6

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccc----cccHHHHHHHHH---HHccCCCCCcceEe-------eeEeCC---
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQAL----NLEKDAFYREIQ---LLGRLHHRHLLALQ-------GFSTGR---  105 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~----~~~~~~~~~ei~---~l~~l~h~niv~~~-------~~~~~~---  105 (309)
                      +.||+|+||.||+|.. .+++.||+|++...    ....+.+.+|++   .+++++||||++++       +++.+.   
T Consensus        79 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~  158 (377)
T 3byv_A           79 TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKK  158 (377)
T ss_dssp             EEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSC
T ss_pred             ceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCc
Confidence            5799999999999996 56899999998532    223467889994   55555799999988       544332   


Q ss_pred             ---------------eeEEEEeeCCCCCHHHhhcCCC-----CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCC
Q 021659          106 ---------------KRLLVFDNIENGSLKEHLNDPL-----KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISS  165 (309)
Q Consensus       106 ---------------~~~lv~e~~~~~sL~~~i~~~~-----~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p  165 (309)
                                     ..|+||||+ +|+|.+++....     ...+++..++.++.|++.||.||   |+.+++||||||
T Consensus       159 ~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivHrDikp  234 (377)
T 3byv_A          159 KMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASL---HHYGLVHTYLRP  234 (377)
T ss_dssp             SEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHH---HHTTEECSCCCG
T ss_pred             cccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHH---HhCCeecCCCCH
Confidence                           378999999 579999997520     12344588889999999999999   777999999999


Q ss_pred             CceeeCCCCceeEeccccccccc----ccCCCCCCCCCCCCC-------------CCCCCCcEeehhhHHHHHHhCCCCC
Q 021659          166 SSIMLDENFTAKLSDVGFFNSVR----NYATMPHSSCPEDCS-------------TQDCSNIIFQLGVLILELVTGQSPE  228 (309)
Q Consensus       166 ~nill~~~~~~kl~dfg~~~~~~----~~~~~~~~~~PE~~~-------------~~~~~~Dv~slG~~l~~l~tg~~p~  228 (309)
                      +||+++.++.+||+|||++....    ...+ +.|+|||...             ..+.++||||||+++|+|++|+.||
T Consensus       235 ~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf  313 (377)
T 3byv_A          235 VDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPI  313 (377)
T ss_dssp             GGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC
T ss_pred             HHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCC
Confidence            99999999999999999987543    3355 8999999642             4578899999999999999999999


Q ss_pred             CCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          229 EGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ......          .....+... . ...    ...+.+++.+||+.||++|||+.|+++
T Consensus       314 ~~~~~~----------~~~~~~~~~-~-~~~----~~~~~~li~~~L~~dp~~Rpt~~e~l~  359 (377)
T 3byv_A          314 TKDAAL----------GGSEWIFRS-C-KNI----PQPVRALLEGFLRYPKEDRLLPLQAME  359 (377)
T ss_dssp             ----------------CCSGGGGSS-C-CCC----CHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred             cccccc----------cchhhhhhh-c-cCC----CHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence            754211          011111110 0 111    234556667999999999999999984

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=2.3e-38  Score=276.98  Aligned_cols=234  Identities=16%  Similarity=0.182  Sum_probs=172.8

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccccH---HHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEK---DAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~---~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~s  118 (309)
                      +.||+|+||.||++.. .+++.||+|.+.......   +.+..+...++.++||||+++++++.+ ...++||||+++ +
T Consensus        13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~-~   91 (290)
T 3fme_A           13 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT-S   91 (290)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCSE-E
T ss_pred             HhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhcc-c
Confidence            6899999999999997 568999999986433222   234445556788899999999997765 678899999985 8


Q ss_pred             HHHhhcC--CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCC-CeeecccCCCceeeCCCCceeEeccccccccc------c
Q 021659          119 LKEHLND--PLKTPLDWKTRLQIAIGVAAALEYLLLFSNL-PMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------N  189 (309)
Q Consensus       119 L~~~i~~--~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~-~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------~  189 (309)
                      |.+++..  .....+++..++.++.|++.||.||   |++ +++||||||+||+++.++.+||+|||++....      .
T Consensus        92 l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  168 (290)
T 3fme_A           92 LDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL---HSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDI  168 (290)
T ss_dssp             HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH---HHHSCCCCCCCSGGGCEECTTCCEEBCCC--------------
T ss_pred             hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---hhcCCeecCCCCHHHEEECCCCCEEEeecCCcccccccccccc
Confidence            8777643  1257899999999999999999999   665 99999999999999999999999999986442      2


Q ss_pred             cCCCCCCCCCCCC------CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHH
Q 021659          190 YATMPHSSCPEDC------STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKE  263 (309)
Q Consensus       190 ~~~~~~~~~PE~~------~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  263 (309)
                      ..+++.|+|||..      ...+.++||||||+++++|++|+.||..................      +.......   
T Consensus       169 ~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~------~~~~~~~~---  239 (290)
T 3fme_A          169 DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS------PQLPADKF---  239 (290)
T ss_dssp             -CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCC------CCCCTTTS---
T ss_pred             cCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCC------CCcccccC---
Confidence            3678899999973      22367899999999999999999999864333333322211111      11111111   


Q ss_pred             HHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          264 LKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       264 ~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ...+.+++.+||+.||++|||+.|+++
T Consensus       240 ~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          240 SAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence            234566777999999999999999986

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=7e-39  Score=284.16  Aligned_cols=241  Identities=17%  Similarity=0.201  Sum_probs=181.4

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEecccc---ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALN---LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~---~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      +.||+|+||.||+|....  .+|+|.+....   ...+.+.+|+.++++++||||+++++++.+ ...++||||+++++|
T Consensus        39 ~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L  116 (319)
T 2y4i_B           39 ELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTL  116 (319)
T ss_dssp             CBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEEH
T ss_pred             eEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCcH
Confidence            689999999999998754  48899885432   223467889999999999999999998765 677899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-----------
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-----------  188 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-----------  188 (309)
                      .+++... ...+++..+..++.+++.||.||   |+.+++||||+|+||+++ ++.+||+|||++....           
T Consensus       117 ~~~l~~~-~~~~~~~~~~~i~~qi~~al~~l---H~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~  191 (319)
T 2y4i_B          117 YSVVRDA-KIVLDVNKTRQIAQEIVKGMGYL---HAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKL  191 (319)
T ss_dssp             HHHTTSS-CCCCCSHHHHHHHHHHHHHHHHH---HHTTCCCCCCCSTTEEEC---CCEECCCSCCC----------CCSC
T ss_pred             HHHHHhc-CCCCCHHHHHHHHHHHHHHHHHH---HhCCccccCCChhhEEEe-CCCEEEeecCCcccccccccccccccc
Confidence            9999763 35789999999999999999999   777999999999999998 6799999999875432           


Q ss_pred             -ccCCCCCCCCCCCCCC-----------CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCC
Q 021659          189 -NYATMPHSSCPEDCST-----------QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLG  256 (309)
Q Consensus       189 -~~~~~~~~~~PE~~~~-----------~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  256 (309)
                       ...+++.|.|||....           .+.++||||||+++|+|++|+.||........ ..... ....     +...
T Consensus       192 ~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~-~~~~-----~~~~  264 (319)
T 2y4i_B          192 RIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI-IWQMG-TGMK-----PNLS  264 (319)
T ss_dssp             BCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHH-HHHHH-TTCC-----CCCC
T ss_pred             ccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHhc-cCCC-----CCCC
Confidence             2246788999996432           36689999999999999999999986543221 11111 1111     1111


Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccccc
Q 021659          257 GSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCY  301 (309)
Q Consensus       257 ~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~~  301 (309)
                      ....   ...+.+++.+||..||++|||+.++++.|+++......
T Consensus       265 ~~~~---~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~  306 (319)
T 2y4i_B          265 QIGM---GKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRR  306 (319)
T ss_dssp             CSSC---CTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC------
T ss_pred             cCCC---CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhcc
Confidence            1111   12455667799999999999999999999987765443

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=6.3e-39  Score=284.07  Aligned_cols=246  Identities=15%  Similarity=0.226  Sum_probs=186.6

Q ss_pred             cCHHHHHHhhcccc--cccccCCCceEEEEEEcCCcEEEEEEeccccc---cHHHHHHHHHHHccCC--CCCcceEeeeE
Q 021659           30 FSYKDIKMATDGFH--RIVYTNSHGAAYKARFQDGEVALVKEIQALNL---EKDAFYREIQLLGRLH--HRHLLALQGFS  102 (309)
Q Consensus        30 ~~~~~i~~~~~~~~--~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~--h~niv~~~~~~  102 (309)
                      +.+..+....+.|.  +.||+|+||.||++...+++.||+|.+.....   ..+.+.+|++++++++  |+||+++++++
T Consensus        18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~   97 (313)
T 3cek_A           18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE   97 (313)
T ss_dssp             --CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred             CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence            33443444444454  58999999999999988899999999854333   2357889999999997  59999999987


Q ss_pred             eC-CeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecc
Q 021659          103 TG-RKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDV  181 (309)
Q Consensus       103 ~~-~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~df  181 (309)
                      .+ ...++||| +.+++|.+++..  ...+++..+..++.+++.||.||   |+.+++||||||+||+++ ++.+||+||
T Consensus        98 ~~~~~~~lv~e-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~dlkp~NIl~~-~~~~kL~Df  170 (313)
T 3cek_A           98 ITDQYIYMVME-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTI---HQHGIVHSDLKPANFLIV-DGMLKLIDF  170 (313)
T ss_dssp             ECSSEEEEEEC-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEEE-TTEEEECCC
T ss_pred             ecCCEEEEEEe-cCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCceecCCCcccEEEE-CCeEEEeec
Confidence            65 67789999 567799999976  56789999999999999999999   777999999999999996 489999999


Q ss_pred             ccccccc---------ccCCCCCCCCCCCCC-------------CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHH
Q 021659          182 GFFNSVR---------NYATMPHSSCPEDCS-------------TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQ  239 (309)
Q Consensus       182 g~~~~~~---------~~~~~~~~~~PE~~~-------------~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~  239 (309)
                      |++....         ...+++.|+|||...             ..+.++||||||+++++|++|+.||...........
T Consensus       171 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~  250 (313)
T 3cek_A          171 GIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH  250 (313)
T ss_dssp             SSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHH
T ss_pred             cccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHH
Confidence            9986542         235788999999643             346689999999999999999999986544333332


Q ss_pred             HhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          240 ESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       240 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      ........     ...... .   ...+.+++.+||+.||++|||+.|+++.
T Consensus       251 ~~~~~~~~-----~~~~~~-~---~~~l~~li~~~l~~dp~~Rps~~ell~h  293 (313)
T 3cek_A          251 AIIDPNHE-----IEFPDI-P---EKDLQDVLKCCLKRDPKQRISIPELLAH  293 (313)
T ss_dssp             HHHCTTSC-----CCCCCC-S---CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHhcccc-----cCCccc-c---hHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence            22111110     111111 1   2355666779999999999999999854

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=4.2e-38  Score=280.01  Aligned_cols=243  Identities=16%  Similarity=0.165  Sum_probs=182.5

Q ss_pred             cccccCCCceEEEEEE--cCCcEEEEEEecccccc---HHHHHHHHHHHccC---CCCCcceEeeeEe-----C-CeeEE
Q 021659           44 RIVYTNSHGAAYKARF--QDGEVALVKEIQALNLE---KDAFYREIQLLGRL---HHRHLLALQGFST-----G-RKRLL  109 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~--~~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l---~h~niv~~~~~~~-----~-~~~~l  109 (309)
                      +.||+|+||.||+|..  .+++.||+|++......   ...+.+|+.+++.+   +||||+++++++.     . ...++
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l   96 (326)
T 1blx_A           17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTL   96 (326)
T ss_dssp             EEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEE
T ss_pred             eeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEE
Confidence            6899999999999997  45789999998543322   23566788777766   8999999999764     2 46779


Q ss_pred             EEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-
Q 021659          110 VFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-  188 (309)
Q Consensus       110 v~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-  188 (309)
                      ||||++ ++|.+++.......+++..+..++.|++.||.||   |+.|++|+||+|+||+++.++.+||+|||++.... 
T Consensus        97 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~  172 (326)
T 1blx_A           97 VFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL---HSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF  172 (326)
T ss_dssp             EEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCG
T ss_pred             EEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH---HHCCceeccCCHHHeEEcCCCCEEEecCcccccccC
Confidence            999998 5999999765456699999999999999999999   77899999999999999999999999999986543 


Q ss_pred             -----ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhc--c---ccccccc------
Q 021659          189 -----NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESS--I---SSSIHRM------  250 (309)
Q Consensus       189 -----~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~--~---~~~~~~~------  250 (309)
                           ...++..|.|||...  ..+.++||||||+++|+|++|+.||.+............  .   .......      
T Consensus       173 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  252 (326)
T 1blx_A          173 QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQ  252 (326)
T ss_dssp             GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGG
T ss_pred             CCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchh
Confidence                 346788999999643  347889999999999999999999987654332221110  0   0000000      


Q ss_pred             -ccC---cCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          251 -IDP---DLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       251 -~~~---~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                       ...   .............+.+++.+||..||++|||+.|+++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          253 AFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             GSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             hhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence             000   0000001111345566777999999999999999994

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=4.9e-38  Score=284.32  Aligned_cols=244  Identities=16%  Similarity=0.179  Sum_probs=184.5

Q ss_pred             cccc--cccccCCCceEEEEEEc-CCcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC------CeeE
Q 021659           40 DGFH--RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG------RKRL  108 (309)
Q Consensus        40 ~~~~--~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~------~~~~  108 (309)
                      +.|.  +.||+|+||.||++... ++..||+|++.....  ..+.+.+|++++++++||||+++++++..      ...+
T Consensus        27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~  106 (364)
T 3qyz_A           27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY  106 (364)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred             ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEE
Confidence            4454  58999999999999974 678899999864332  23678899999999999999999998753      3578


Q ss_pred             EEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc
Q 021659          109 LVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR  188 (309)
Q Consensus       109 lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~  188 (309)
                      +||||+.+ +|.+++..   ..+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....
T Consensus       107 iv~e~~~~-~L~~~l~~---~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~  179 (364)
T 3qyz_A          107 IVQDLMET-DLYKLLKT---QHLSNDHICYFLYQILRGLKYI---HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD  179 (364)
T ss_dssp             EEEECCSE-EHHHHHHH---CCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEcccCc-CHHHHHHh---CCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence            99999985 99999875   5699999999999999999999   77899999999999999999999999999986443


Q ss_pred             ----------ccCCCCCCCCCCCC---CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHh--ccccc---cccc
Q 021659          189 ----------NYATMPHSSCPEDC---STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQES--SISSS---IHRM  250 (309)
Q Consensus       189 ----------~~~~~~~~~~PE~~---~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~--~~~~~---~~~~  250 (309)
                                ...+|+.|+|||..   ...+.++||||||+++|+|++|+.||.+...........  .....   ...+
T Consensus       180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  259 (364)
T 3qyz_A          180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI  259 (364)
T ss_dssp             GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTC
T ss_pred             CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHh
Confidence                      23678889999963   235788999999999999999999997654332221111  00000   0000


Q ss_pred             --------ccCcC-CCCCC-----HHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          251 --------IDPDL-GGSYD-----SKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       251 --------~~~~l-~~~~~-----~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                              ..... .....     ......+.+++.+||+.||++|||+.|+++
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  313 (364)
T 3qyz_A          260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  313 (364)
T ss_dssp             CCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                    00000 00000     011245667777999999999999999985

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=2.1e-38  Score=306.76  Aligned_cols=240  Identities=16%  Similarity=0.220  Sum_probs=189.7

Q ss_pred             cccccCCCceEEEEEEc----CCcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ----DGEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~----~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||+|.+.    .+..||+|.+.....  ..+.+.+|+.++++++||||+++++++.+...++||||+++|
T Consensus       396 ~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~lv~E~~~~g  475 (656)
T 2j0j_A          396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLG  475 (656)
T ss_dssp             EEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTTC
T ss_pred             eEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCceEEEEEcCCCC
Confidence            57999999999999973    246789998854332  236789999999999999999999998878889999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc--------
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN--------  189 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~--------  189 (309)
                      +|.+++... ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++.....        
T Consensus       476 ~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~L---H~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~  551 (656)
T 2j0j_A          476 ELRSFLQVR-KFSLDLASLILYAYQLSTALAYL---ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK  551 (656)
T ss_dssp             BHHHHHHHT-TTTCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC--------
T ss_pred             cHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHH---HhCCccccccchHhEEEeCCCCEEEEecCCCeecCCCcceeccC
Confidence            999999752 35689999999999999999999   677999999999999999999999999999875432        


Q ss_pred             cCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          190 YATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       190 ~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                      ..+++.|+|||..  ...+.++||||||+++|||++ |..||.+...... ...... +..     +..+...    ...
T Consensus       552 ~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~-~~~i~~-~~~-----~~~~~~~----~~~  620 (656)
T 2j0j_A          552 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV-IGRIEN-GER-----LPMPPNC----PPT  620 (656)
T ss_dssp             --CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH-HHHHHH-TCC-----CCCCTTC----CHH
T ss_pred             CCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHc-CCC-----CCCCccc----cHH
Confidence            2345679999964  345778999999999999997 9999986543221 111111 100     1111111    245


Q ss_pred             HHHHHHHccCCCCCCCCChHHHHHHHhhhhcc
Q 021659          267 LLAVARLCIKTKDKPTISIPQISRYLQNEVDI  298 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~  298 (309)
                      +.+++.+||..||++|||+.++++.|+++++-
T Consensus       621 l~~li~~~l~~dP~~RPs~~el~~~L~~il~~  652 (656)
T 2j0j_A          621 LYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  652 (656)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence            66677799999999999999999999987653

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=1.8e-38  Score=292.63  Aligned_cols=240  Identities=18%  Similarity=0.229  Sum_probs=178.6

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-------CeeEEEEeeCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-------RKRLLVFDNIE  115 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-------~~~~lv~e~~~  115 (309)
                      +.||+|+||.||+|+.. +++.||+|++....   ....+|++++++++||||+++++++..       ...++||||++
T Consensus        60 ~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~  136 (420)
T 1j1b_A           60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP  136 (420)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCC
T ss_pred             eEEeeCCCEEEEEEEECCCCcEEEEEEecccc---hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhccc
Confidence            57999999999999984 58999999985432   224479999999999999999997631       12568999998


Q ss_pred             CCCHHHhhcC--CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC-CceeEeccccccccc----
Q 021659          116 NGSLKEHLND--PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN-FTAKLSDVGFFNSVR----  188 (309)
Q Consensus       116 ~~sL~~~i~~--~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~-~~~kl~dfg~~~~~~----  188 (309)
                      + ++.+.+..  .....+++..+..++.|++.||.||   |+.+|+||||||+|||++.+ +.+||+|||+++...    
T Consensus       137 ~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~  212 (420)
T 1j1b_A          137 E-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP  212 (420)
T ss_dssp             E-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH---HTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCC
T ss_pred             c-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCChhhEEEeCCCCeEEeccchhhhhcccCCC
Confidence            7 66655532  1257799999999999999999999   78899999999999999965 678999999997542    


Q ss_pred             --ccCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccc------------ccccccc
Q 021659          189 --NYATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSIS------------SSIHRMI  251 (309)
Q Consensus       189 --~~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~------------~~~~~~~  251 (309)
                        ...+|+.|+|||...   .++.++|||||||++|||++|+.||.+.....+........            .......
T Consensus       213 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~  292 (420)
T 1j1b_A          213 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK  292 (420)
T ss_dssp             CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCC
T ss_pred             ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhc
Confidence              346788999999643   35788999999999999999999998765443332211100            0001111


Q ss_pred             cCcCCCCC-----CHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          252 DPDLGGSY-----DSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       252 ~~~l~~~~-----~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      -+.+....     .......+.+++.+||+.||++|||+.|+++
T Consensus       293 ~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~  336 (420)
T 1j1b_A          293 FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  336 (420)
T ss_dssp             CCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence            11111100     0111245667777999999999999999984

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=1.1e-38  Score=291.71  Aligned_cols=242  Identities=14%  Similarity=0.209  Sum_probs=176.9

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-C------eeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-R------KRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~------~~~lv~e~~~~  116 (309)
                      +.||+|+||.||+|+...+..+|+|++.....   ...+|+++++.++||||+++++++.. .      ..++||||+++
T Consensus        46 ~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~---~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~  122 (394)
T 4e7w_A           46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR---FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE  122 (394)
T ss_dssp             EEEEEETTEEEEEEEETTTEEEEEEEEECCTT---SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSE
T ss_pred             EEEeeCCCeEEEEEEECCCCeEEEEEEecCcc---hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCc
Confidence            58999999999999987766688888743322   23469999999999999999997632 1      26799999987


Q ss_pred             CCHHHhhc-CCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeC-CCCceeEeccccccccc------
Q 021659          117 GSLKEHLN-DPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLD-ENFTAKLSDVGFFNSVR------  188 (309)
Q Consensus       117 ~sL~~~i~-~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~-~~~~~kl~dfg~~~~~~------  188 (309)
                      +.+..... ......+++..+..++.|++.||.||   |+.+++||||||+||+++ .++.+||+|||++....      
T Consensus       123 ~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~~~  199 (394)
T 4e7w_A          123 TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYI---HSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNV  199 (394)
T ss_dssp             EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCC
T ss_pred             cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH---HHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCCCc
Confidence            44333221 11246799999999999999999999   778999999999999998 78999999999986542      


Q ss_pred             ccCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccc---------cccccc---C
Q 021659          189 NYATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSS---------IHRMID---P  253 (309)
Q Consensus       189 ~~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~---------~~~~~~---~  253 (309)
                      ...+|+.|+|||...   .++.++|||||||++|+|++|+.||.+.....+........+.         ......   +
T Consensus       200 ~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~  279 (394)
T 4e7w_A          200 SYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFP  279 (394)
T ss_dssp             SSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCC
T ss_pred             ccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccc
Confidence            345778899999643   3578899999999999999999999876544333221110000         000000   1


Q ss_pred             cCCCC-----CCHHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          254 DLGGS-----YDSKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       254 ~l~~~-----~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      .....     +.......+.+++.+||++||++|||+.|+++.
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  322 (394)
T 4e7w_A          280 QIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH  322 (394)
T ss_dssp             CCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             cccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence            10000     001113456677779999999999999999853

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=4e-38  Score=278.97  Aligned_cols=240  Identities=14%  Similarity=0.159  Sum_probs=176.1

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc-ccHHHHHHHHHHHccCCCCCcceEeeeEe---------------CCe
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN-LEKDAFYREIQLLGRLHHRHLLALQGFST---------------GRK  106 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~-~~~~~~~~ei~~l~~l~h~niv~~~~~~~---------------~~~  106 (309)
                      +.||+|+||.||+|... +++.||+|.+.... ...+.+.+|++++++++||||+++++++.               ...
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~   96 (320)
T 2i6l_A           17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNS   96 (320)
T ss_dssp             EECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSE
T ss_pred             EEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccCc
Confidence            58999999999999985 48999999985443 23467889999999999999999998762               246


Q ss_pred             eEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeC-CCCceeEecccccc
Q 021659          107 RLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLD-ENFTAKLSDVGFFN  185 (309)
Q Consensus       107 ~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~-~~~~~kl~dfg~~~  185 (309)
                      .++||||++ ++|.+++..   ..+++..+..++.|++.||.||   |+.+++||||||+||+++ .++.+||+|||++.
T Consensus        97 ~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~  169 (320)
T 2i6l_A           97 VYIVQEYME-TDLANVLEQ---GPLLEEHARLFMYQLLRGLKYI---HSANVLHRDLKPANLFINTEDLVLKIGDFGLAR  169 (320)
T ss_dssp             EEEEEECCS-EEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCSGGGEEEETTTTEEEECCCTTCB
T ss_pred             eeEEeeccC-CCHHHHhhc---CCccHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHEEEcCCCCeEEEccCcccc
Confidence            789999998 599999974   5789999999999999999999   778999999999999997 56799999999987


Q ss_pred             ccc----------ccCCCCCCCCCCCC---CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccc------
Q 021659          186 SVR----------NYATMPHSSCPEDC---STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSS------  246 (309)
Q Consensus       186 ~~~----------~~~~~~~~~~PE~~---~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~------  246 (309)
                      ...          ...++..|.|||..   ...+.++||||||+++++|++|+.||.+................      
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  249 (320)
T 2i6l_A          170 IMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDR  249 (320)
T ss_dssp             CC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHH
T ss_pred             ccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhh
Confidence            542          22457889999964   33578899999999999999999999876543222111100000      


Q ss_pred             ------ccccccCcCC-CCCC-----HHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          247 ------IHRMIDPDLG-GSYD-----SKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       247 ------~~~~~~~~l~-~~~~-----~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                            .......... ....     ......+.+++.+||+.||++|||+.|+++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          250 QELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             HHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             hhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence                  0000000000 0000     011345667777999999999999999985

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=7.2e-38  Score=281.61  Aligned_cols=240  Identities=14%  Similarity=0.178  Sum_probs=182.7

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC------CeeEEEEeeC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG------RKRLLVFDNI  114 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~------~~~~lv~e~~  114 (309)
                      +.||+|+||.||+|... +++.||+|.+.....  ....+.+|++++++++||||+++++++..      ...++||||+
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~   96 (353)
T 2b9h_A           17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM   96 (353)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECCC
T ss_pred             eEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEecc
Confidence            68999999999999974 588999999854322  24567899999999999999999997643      4578999999


Q ss_pred             CCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------
Q 021659          115 ENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------  188 (309)
Q Consensus       115 ~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------  188 (309)
                      .+ +|.+++..   ..+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....      
T Consensus        97 ~~-~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~L---H~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~  169 (353)
T 2b9h_A           97 QT-DLHRVIST---QMLSDDHIQYFIYQTLRAVKVL---HGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADN  169 (353)
T ss_dssp             SE-EHHHHHHH---CCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC------
T ss_pred             Cc-cHHHHHhh---cCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEEcCCCcEEEEecccccccccccccc
Confidence            75 99999875   5799999999999999999999   77899999999999999999999999999986543      


Q ss_pred             -----------ccCCCCCCCCCCCC---CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccccc------
Q 021659          189 -----------NYATMPHSSCPEDC---STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIH------  248 (309)
Q Consensus       189 -----------~~~~~~~~~~PE~~---~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~------  248 (309)
                                 ...+++.|+|||..   ...+.++||||||+++++|++|+.||.+..............+...      
T Consensus       170 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (353)
T 2b9h_A          170 SEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLR  249 (353)
T ss_dssp             ----------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTT
T ss_pred             cCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhcccc
Confidence                       12467889999963   3357889999999999999999999987654332221110000000      


Q ss_pred             --------cccc--CcCCCCC----CHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          249 --------RMID--PDLGGSY----DSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       249 --------~~~~--~~l~~~~----~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                              +...  +......    .......+.+++.+||+.||++|||+.|+++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (353)
T 2b9h_A          250 CIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE  305 (353)
T ss_dssp             TCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence                    0000  0000000    0011345667777999999999999999986

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=5.1e-38  Score=282.22  Aligned_cols=243  Identities=14%  Similarity=0.157  Sum_probs=183.7

Q ss_pred             cccccCCCceEEEEEEc-CC-cEEEEEEeccccccHHHHHHHHHHHccCCCCC------cceEeeeEe-CCeeEEEEeeC
Q 021659           44 RIVYTNSHGAAYKARFQ-DG-EVALVKEIQALNLEKDAFYREIQLLGRLHHRH------LLALQGFST-GRKRLLVFDNI  114 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~-~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~n------iv~~~~~~~-~~~~~lv~e~~  114 (309)
                      +.||+|+||.||+|... ++ ..||+|++.......+.+.+|++++++++|++      ++.+++++. ....++||||+
T Consensus        25 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~  104 (355)
T 2eu9_A           25 GNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL  104 (355)
T ss_dssp             EEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEECC
T ss_pred             EEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEecc
Confidence            68999999999999974 34 68999999765555677889999999987655      888888665 47888999999


Q ss_pred             CCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceee-------------------CCCCc
Q 021659          115 ENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIML-------------------DENFT  175 (309)
Q Consensus       115 ~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill-------------------~~~~~  175 (309)
                       ++++.+.+.......+++..+..++.|++.||.||   |+.+++||||||+||++                   +.++.
T Consensus       105 -~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~l---H~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~  180 (355)
T 2eu9_A          105 -GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFL---HENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS  180 (355)
T ss_dssp             -CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCC
T ss_pred             -CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEEecccccccccccccccccccCCCc
Confidence             55777777654446799999999999999999999   78899999999999999                   56788


Q ss_pred             eeEeccccccccc----ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccc
Q 021659          176 AKLSDVGFFNSVR----NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHR  249 (309)
Q Consensus       176 ~kl~dfg~~~~~~----~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~  249 (309)
                      +||+|||++....    ...+|+.|+|||...  ..+.++||||||+++|+|++|..||................+..+.
T Consensus       181 ~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~  260 (355)
T 2eu9_A          181 IRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPS  260 (355)
T ss_dssp             EEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCH
T ss_pred             EEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcH
Confidence            9999999987543    346788999999643  3578899999999999999999999865433222111111010000


Q ss_pred             c-----------ccCcC---------------------CCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          250 M-----------IDPDL---------------------GGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       250 ~-----------~~~~l---------------------~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .           .....                     .......+...+.+++.+||+.||++|||+.|+++
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  333 (355)
T 2eu9_A          261 HMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALL  333 (355)
T ss_dssp             HHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            0           00000                     00112233557778888999999999999999984

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=4e-38  Score=294.35  Aligned_cols=247  Identities=17%  Similarity=0.195  Sum_probs=186.3

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcc-eEeeeEe-CCeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLL-ALQGFST-GRKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv-~~~~~~~-~~~~~lv~e~~~~~sL~  120 (309)
                      +.||+|+||.||+|.. .+++.||+|++.... ..+.+..|+++++.|+|++.+ .+..++. ....++||||+ +++|.
T Consensus        13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL~   90 (483)
T 3sv0_A           13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLE   90 (483)
T ss_dssp             CCCEECSSCEEEEEEETTTCCEEEEEEEETTC-SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBHH
T ss_pred             EEEeeCCCEEEEEEEECCCCcEEEEEEecccc-ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCHH
Confidence            6899999999999997 568999999875433 234588999999999875444 4444444 36778999999 88999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceee---CCCCceeEeccccccccc---------
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIML---DENFTAKLSDVGFFNSVR---------  188 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill---~~~~~~kl~dfg~~~~~~---------  188 (309)
                      +++... ...+++..++.++.|++.||.||   |+.+|+||||||+|||+   +.++.+||+|||++....         
T Consensus        91 ~ll~~~-~~~l~~~~~~~i~~qi~~aL~yL---H~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~  166 (483)
T 3sv0_A           91 DLFNFC-SRKLSLKTVLMLADQMINRVEFV---HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIP  166 (483)
T ss_dssp             HHHHHT-TTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCC
T ss_pred             HHHHhh-cCCCCHHHHHHHHHHHHHHHHHH---HHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccc
Confidence            999732 35799999999999999999999   77899999999999999   578899999999986442         


Q ss_pred             -----ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCcc--HHHHHHHhcccccccccccCcCCCCC
Q 021659          189 -----NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVD--LIQWIQESSISSSIHRMIDPDLGGSY  259 (309)
Q Consensus       189 -----~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~  259 (309)
                           ...++..|++||...+  .+.++|||||||++|+|++|+.||.+...  ..+.+...... .....+. .+...+
T Consensus       167 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~-~~~~~~~-~l~~~~  244 (483)
T 3sv0_A          167 YRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK-KVATSIE-ALCRGY  244 (483)
T ss_dssp             CCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHH-HHHSCHH-HHHTTS
T ss_pred             cccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhc-cccccHH-HHhcCC
Confidence                 3357889999997543  47789999999999999999999976422  11111111000 0000000 000111


Q ss_pred             CHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcccccc
Q 021659          260 DSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCYK  302 (309)
Q Consensus       260 ~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~~~  302 (309)
                          ...+.+++.+||..||++||++.+|++.|++++.....+
T Consensus       245 ----p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~~~  283 (483)
T 3sv0_A          245 ----PTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGFQ  283 (483)
T ss_dssp             ----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred             ----cHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcCCC
Confidence                245667777999999999999999999999887655443

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=2.3e-38  Score=286.74  Aligned_cols=255  Identities=16%  Similarity=0.183  Sum_probs=190.4

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccCC-----------CCCcceEeeeEeC-----C
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRLH-----------HRHLLALQGFSTG-----R  105 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~-----------h~niv~~~~~~~~-----~  105 (309)
                      .+.||+|+||.||+|+. .+++.||+|++.......+.+.+|++++++++           |+||+++++++..     .
T Consensus        24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  103 (373)
T 1q8y_A           24 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGV  103 (373)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEE
T ss_pred             EEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCc
Confidence            36899999999999997 56899999999765555677889999999886           7899999997653     1


Q ss_pred             eeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCC-CeeecccCCCceeeC------CCCceeE
Q 021659          106 KRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNL-PMYYVSISSSSIMLD------ENFTAKL  178 (309)
Q Consensus       106 ~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~-~i~H~dl~p~nill~------~~~~~kl  178 (309)
                      ..++|||++ +++|.+++.......+++..+..++.|++.||.||   |++ +++||||||+||+++      ..+.+||
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~l---H~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl  179 (373)
T 1q8y_A          104 HVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYM---HRRCGIIHTDIKPENVLMEIVDSPENLIQIKI  179 (373)
T ss_dssp             EEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHH---HHTTCEECSCCSGGGEEEEEEETTTTEEEEEE
T ss_pred             eEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHH---HhcCCEEecCCChHHeEEeccCCCcCcceEEE
Confidence            567999999 78999999765456799999999999999999999   666 999999999999994      4458999


Q ss_pred             eccccccccc----ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccH------HHHHHHhccccc
Q 021659          179 SDVGFFNSVR----NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDL------IQWIQESSISSS  246 (309)
Q Consensus       179 ~dfg~~~~~~----~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~------~~~~~~~~~~~~  246 (309)
                      +|||++....    ...+|+.|+|||...+  .+.++||||||+++|+|++|+.||.+....      ..........+.
T Consensus       180 ~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  259 (373)
T 1q8y_A          180 ADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGE  259 (373)
T ss_dssp             CCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCS
T ss_pred             cccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCC
Confidence            9999986543    3467889999996433  478899999999999999999999754310      000000000000


Q ss_pred             cc---------------------ccccCcC---------CCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH--HHhh
Q 021659          247 IH---------------------RMIDPDL---------GGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR--YLQN  294 (309)
Q Consensus       247 ~~---------------------~~~~~~l---------~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~--~L~~  294 (309)
                      .+                     .+.....         ....+......+.+++.+||+.||++|||+.|+++  .+.+
T Consensus       260 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~  339 (373)
T 1q8y_A          260 LPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKD  339 (373)
T ss_dssp             CCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTT
T ss_pred             CCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhc
Confidence            00                     0000000         01234566778889999999999999999999996  5665


Q ss_pred             hhccccc
Q 021659          295 EVDIQCY  301 (309)
Q Consensus       295 ~~~~~~~  301 (309)
                      ....+..
T Consensus       340 ~~~~~~~  346 (373)
T 1q8y_A          340 TLGMEEI  346 (373)
T ss_dssp             CTTCTTC
T ss_pred             ccCcccc
Confidence            5544443

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=1.3e-37  Score=280.35  Aligned_cols=238  Identities=16%  Similarity=0.205  Sum_probs=180.6

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccccc---HHHHHHHHHHHccCCCCCcceEeeeEeCC-------eeEEEEe
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLE---KDAFYREIQLLGRLHHRHLLALQGFSTGR-------KRLLVFD  112 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~h~niv~~~~~~~~~-------~~~lv~e  112 (309)
                      +.||+|+||.||+|.. .+|+.||+|.+......   .+.+.+|+.++++++||||+++++++...       ..++|||
T Consensus        30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e  109 (353)
T 3coi_A           30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMP  109 (353)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEE
T ss_pred             eeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEec
Confidence            5799999999999997 46899999998543322   35688999999999999999999987642       2489999


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc----
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----  188 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----  188 (309)
                      |+.+ +|.+++.    ..+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....    
T Consensus       110 ~~~~-~l~~~~~----~~~~~~~~~~i~~qi~~al~~L---H~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~  181 (353)
T 3coi_A          110 FMQT-DLQKIMG----LKFSEEKIQYLVYQMLKGLKYI---HSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMT  181 (353)
T ss_dssp             CCSE-EGGGTTT----SCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC------
T ss_pred             cccC-CHHHHhc----CCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEeECCCCcEEEeecccccCCCCCcc
Confidence            9984 8888874    3499999999999999999999   77799999999999999999999999999987543    


Q ss_pred             ccCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccc-------------------
Q 021659          189 NYATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSS-------------------  246 (309)
Q Consensus       189 ~~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~-------------------  246 (309)
                      ...+++.|+|||...   ..+.++||||||+++++|++|+.||.+..............+.                   
T Consensus       182 ~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  261 (353)
T 3coi_A          182 GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQ  261 (353)
T ss_dssp             --CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHH
T ss_pred             ccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHH
Confidence            236788999999643   3578999999999999999999999875433222111100000                   


Q ss_pred             -ccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          247 -IHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       247 -~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                       .+....+... .........+.+++.+||+.||++|||+.++++
T Consensus       262 ~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  305 (353)
T 3coi_A          262 SLPQTPRKDFT-QLFPRASPQAADLLEKMLELDVDKRLTAAQALT  305 (353)
T ss_dssp             TSCBCSSCCTT-TTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             hCcCCCCccHH-HhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence             0000001111 011122345666777999999999999999985

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=5.4e-39  Score=291.34  Aligned_cols=238  Identities=10%  Similarity=-0.065  Sum_probs=163.0

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccc----cHHHHHHHH---HHHccCCCCCcceEe-------eeEe-C---
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL----EKDAFYREI---QLLGRLHHRHLLALQ-------GFST-G---  104 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~----~~~~~~~ei---~~l~~l~h~niv~~~-------~~~~-~---  104 (309)
                      +.||+|+||.||+|.+. +++.||+|++.....    ..+.+.+|+   ..|+. +||||++++       +++. +   
T Consensus        68 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~~~  146 (371)
T 3q60_A           68 EPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQSQP  146 (371)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEETTSC
T ss_pred             eeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheecCCCC
Confidence            58999999999999974 689999999965432    234567775   45555 799988754       3221 1   


Q ss_pred             --------------CeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHH------HHHHHHHHHHHhhhhhcCCCCeeecccC
Q 021659          105 --------------RKRLLVFDNIENGSLKEHLNDPLKTPLDWKTR------LQIAIGVAAALEYLLLFSNLPMYYVSIS  164 (309)
Q Consensus       105 --------------~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~------~~i~~~i~~~l~~lh~~h~~~i~H~dl~  164 (309)
                                    ...++||||++ ++|.+++... ...+++..+      ..++.|++.||.||   |+.+|+|||||
T Consensus       147 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~vk~~i~~qi~~aL~~L---H~~~ivHrDik  221 (371)
T 3q60_A          147 PFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL-DFVYVFRGDEGILALHILTAQLIRLAANL---QSKGLVHGHFT  221 (371)
T ss_dssp             SSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH-HHSCCCCHHHHHHHHHHHHHHHHHHHHHH---HHTTEEETTCS
T ss_pred             CeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh-ccccchhhhhhhhhHHHHHHHHHHHHHHH---HHCCCccCcCC
Confidence                          23689999999 7999999752 123444455      67789999999999   77899999999


Q ss_pred             CCceeeCCCCceeEeccccccccc----ccCCCCCCCCCCCCCC----CCCCCcEeehhhHHHHHHhCCCCCCCCccHHH
Q 021659          165 SSSIMLDENFTAKLSDVGFFNSVR----NYATMPHSSCPEDCST----QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQ  236 (309)
Q Consensus       165 p~nill~~~~~~kl~dfg~~~~~~----~~~~~~~~~~PE~~~~----~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~  236 (309)
                      |+||+++.++.+||+|||++....    ...+++.|+|||....    .+.++||||||+++|+|++|+.||........
T Consensus       222 p~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~  301 (371)
T 3q60_A          222 PDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIK  301 (371)
T ss_dssp             GGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCT
T ss_pred             HHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccc
Confidence            999999999999999999987554    2356689999997543    47889999999999999999999976421100


Q ss_pred             HHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          237 WIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                         ...........................+.+++.+||+.||++|||+.++++
T Consensus       302 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          302 ---GSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             ---TCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             ---cchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence               000000000000011111100112345566667999999999999999873

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=1e-37  Score=277.99  Aligned_cols=237  Identities=16%  Similarity=0.223  Sum_probs=165.9

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccc--cHHHHHHHHH-HHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL--EKDAFYREIQ-LLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~--~~~~~~~ei~-~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~s  118 (309)
                      +.||+|+||.||++... +++.||+|.+.....  ....+..|+. +++.++||||+++++++.. ...++||||+++ +
T Consensus        28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~-~  106 (327)
T 3aln_A           28 GEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST-S  106 (327)
T ss_dssp             CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-E
T ss_pred             heeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-C
Confidence            57999999999999974 689999999864332  2345556665 7777899999999997764 678899999986 8


Q ss_pred             HHHhhcC---CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCC-CeeecccCCCceeeCCCCceeEecccccccccc-----
Q 021659          119 LKEHLND---PLKTPLDWKTRLQIAIGVAAALEYLLLFSNL-PMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-----  189 (309)
Q Consensus       119 L~~~i~~---~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~-~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-----  189 (309)
                      |.+++..   .....+++..+..++.+++.||.||   |+. +++||||||+||+++.++.+||+|||++.....     
T Consensus       107 l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~  183 (327)
T 3aln_A          107 FDKFYKYVYSVLDDVIPEEILGKITLATVKALNHL---KENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKT  183 (327)
T ss_dssp             HHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHH---HHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC--------
T ss_pred             hHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHH---hccCCEeECCCCHHHEEEcCCCCEEEccCCCceecccccccc
Confidence            8877652   2246799999999999999999999   666 999999999999999999999999999865432     


Q ss_pred             -cCCCCCCCCCCCCC------CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHH
Q 021659          190 -YATMPHSSCPEDCS------TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSK  262 (309)
Q Consensus       190 -~~~~~~~~~PE~~~------~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  262 (309)
                       ..+++.|+|||...      ..+.++||||||+++++|++|+.||.............. .+     ..+.+.......
T Consensus       184 ~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~  257 (327)
T 3aln_A          184 RDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVV-KG-----DPPQLSNSEERE  257 (327)
T ss_dssp             ----------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCC-CS-----CCCCCCCCSSCC
T ss_pred             cCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHh-cC-----CCCCCCCccccc
Confidence             25788999999752      247889999999999999999999976433222111110 00     111111111111


Q ss_pred             HHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          263 ELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       263 ~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ....+.+++.+||..||++|||+.++++
T Consensus       258 ~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          258 FSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence            1345666777999999999999999874

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=2e-37  Score=286.70  Aligned_cols=234  Identities=15%  Similarity=0.135  Sum_probs=175.0

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEeeCCCCCHHH
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFDNIENGSLKE  121 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~~  121 (309)
                      +.||+|+||+||.+...+|+.||+|.+....  .+.+.+|+.+++++ +||||+++++++.+ ...++||||+. |+|.+
T Consensus        21 ~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~~   97 (434)
T 2rio_A           21 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDF--CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQD   97 (434)
T ss_dssp             EEEEECSTTCEEEEEESSSSEEEEEEEEGGG--HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHHH
T ss_pred             CeEeeCCCeEEEEEEEECCeEEEEEEEcHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHHH
Confidence            5799999999987766779999999985432  45678999999887 89999999997765 67789999996 59999


Q ss_pred             hhcCCCCCC-----CCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC-------------CceeEecccc
Q 021659          122 HLNDPLKTP-----LDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN-------------FTAKLSDVGF  183 (309)
Q Consensus       122 ~i~~~~~~~-----l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~-------------~~~kl~dfg~  183 (309)
                      ++.......     .++..++.++.|++.||.||   |+.+++||||||+||+++.+             +.+||+|||+
T Consensus        98 ~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~  174 (434)
T 2rio_A           98 LVESKNVSDENLKLQKEYNPISLLRQIASGVAHL---HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL  174 (434)
T ss_dssp             HHHTC------------CCHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTT
T ss_pred             HHhccCCCchhhhhccchhHHHHHHHHHHHHHHH---HHCCccccCCChHhEEEecCcccccccccCCCceEEEEccccc
Confidence            997632111     12334678999999999999   77899999999999999654             4899999999


Q ss_pred             ccccc-----------ccCCCCCCCCCCCCC---------CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhc
Q 021659          184 FNSVR-----------NYATMPHSSCPEDCS---------TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESS  242 (309)
Q Consensus       184 ~~~~~-----------~~~~~~~~~~PE~~~---------~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~  242 (309)
                      +....           ...+|+.|+|||...         ..+.++|||||||++|+|++ |..||.........+....
T Consensus       175 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~i~~~~  254 (434)
T 2rio_A          175 CKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGI  254 (434)
T ss_dssp             CEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHHHHHTC
T ss_pred             ceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHHHhcCC
Confidence            87543           235889999999643         34788999999999999999 9999976533222111111


Q ss_pred             ccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          243 ISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       243 ~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .  .     .+.............+.+++.+||+.||++|||+.++++
T Consensus       255 ~--~-----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          255 F--S-----LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             C--C-----CCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             C--C-----cccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence            0  0     011111223344567778888999999999999999984

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=4.4e-37  Score=275.19  Aligned_cols=243  Identities=15%  Similarity=0.204  Sum_probs=162.7

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccccHHHHHHHH-HHHccCCCCCcceEeeeEeC-----CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLEKDAFYREI-QLLGRLHHRHLLALQGFSTG-----RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~~~~~~~ei-~~l~~l~h~niv~~~~~~~~-----~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||+|... +++.||+|++.....    ...|+ ..++.++||||+++++++..     ...++||||+++
T Consensus        35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~g  110 (336)
T 3fhr_A           35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK----ARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEG  110 (336)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEESSHH----HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTT
T ss_pred             eeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH----HHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCC
Confidence            36999999999999975 689999999854322    22333 34566689999999997643     336799999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC---CCceeEeccccccccc-----
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE---NFTAKLSDVGFFNSVR-----  188 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~---~~~~kl~dfg~~~~~~-----  188 (309)
                      |+|.+++.......+++..++.++.|++.||.||   |+.+++||||||+||+++.   ++.+||+|||++....     
T Consensus       111 g~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~L---H~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~~~  187 (336)
T 3fhr_A          111 GELFSRIQERGDQAFTEREAAEIMRDIGTAIQFL---HSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQ  187 (336)
T ss_dssp             EEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC------
T ss_pred             CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEEecCCCceEEEeccccceeccccccc
Confidence            9999999875556899999999999999999999   7779999999999999976   4559999999986543     


Q ss_pred             ccCCCCCCCCCCCCCCC--CCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          189 NYATMPHSSCPEDCSTQ--DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       189 ~~~~~~~~~~PE~~~~~--~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                      ...+++.|+|||.....  +.++||||||+++|+|++|+.||........... .........   ..............
T Consensus       188 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~  263 (336)
T 3fhr_A          188 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG-MKRRIRLGQ---YGFPNPEWSEVSED  263 (336)
T ss_dssp             ----------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------CCCTTTSTTCCHH
T ss_pred             cCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh-HHHhhhccc---cccCchhhccCCHH
Confidence            34568899999976443  6789999999999999999999975432111000 000000000   00010001112345


Q ss_pred             HHHHHHHccCCCCCCCCChHHHHH--HHhhhhc
Q 021659          267 LLAVARLCIKTKDKPTISIPQISR--YLQNEVD  297 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rps~~evl~--~L~~~~~  297 (309)
                      +.+++.+||+.||++|||+.|+++  .+.+...
T Consensus       264 ~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~  296 (336)
T 3fhr_A          264 AKQLIRLLLKTDPTERLTITQFMNHPWINQSMV  296 (336)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGGG
T ss_pred             HHHHHHHHCCCChhHCcCHHHHhcCcccccccc
Confidence            566777999999999999999996  5554333

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=4.1e-37  Score=269.44  Aligned_cols=224  Identities=12%  Similarity=-0.008  Sum_probs=171.1

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccccc----HHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLE----KDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~----~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||+|... +++.||+|++......    .+.+.+|+..+.+++||||+++++++.. ...|+||||++++
T Consensus        37 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~  116 (286)
T 3uqc_A           37 IFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGG  116 (286)
T ss_dssp             EEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCEE
T ss_pred             EEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCCC
Confidence            68999999999999975 4899999999654332    2678999999999999999999997754 6888999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccccCCCCCCC
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYATMPHSS  197 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~  197 (309)
                      +|.+++..   . ....++..++.|++.||.||   |+.|++||||||+||+++.++.+||++++.             +
T Consensus       117 ~L~~~l~~---~-~~~~~~~~i~~ql~~aL~~l---H~~givH~Dikp~NIll~~~g~~kl~~~~~-------------~  176 (286)
T 3uqc_A          117 SLQEVADT---S-PSPVGAIRAMQSLAAAADAA---HRAGVALSIDHPSRVRVSIDGDVVLAYPAT-------------M  176 (286)
T ss_dssp             EHHHHHTT---C-CCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEEETTSCEEECSCCC-------------C
T ss_pred             CHHHHHhc---C-CChHHHHHHHHHHHHHHHHH---HHCCCccCCCCcccEEEcCCCCEEEEeccc-------------c
Confidence            99999964   2 35667899999999999999   778999999999999999999999985442             2


Q ss_pred             CCCCCCCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCC--CCCHHHHHHHHHHHHHcc
Q 021659          198 CPEDCSTQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGG--SYDSKELKKLLAVARLCI  275 (309)
Q Consensus       198 ~PE~~~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~l~~l~~~cl  275 (309)
                      +|     .+.++||||||+++|+|++|+.||.+......       -.............  .........+.+++.+||
T Consensus       177 ~~-----~~~~~Di~slG~il~elltg~~Pf~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  244 (286)
T 3uqc_A          177 PD-----ANPQDDIRGIGASLYALLVNRWPLPEAGVRSG-------LAPAERDTAGQPIEPADIDRDIPFQISAVAARSV  244 (286)
T ss_dssp             TT-----CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCC-------SEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHH
T ss_pred             CC-----CCchhHHHHHHHHHHHHHHCCCCCCcCCcchh-------hHHHHHHhccCCCChhhcccCCCHHHHHHHHHHc
Confidence            22     47789999999999999999999986532100       00000000000000  000111245667777999


Q ss_pred             CCCCCCCCChHHHHHHHhhhhcccc
Q 021659          276 KTKDKPTISIPQISRYLQNEVDIQC  300 (309)
Q Consensus       276 ~~dp~~Rps~~evl~~L~~~~~~~~  300 (309)
                      +.||++| |+.|+++.|+.......
T Consensus       245 ~~dP~~R-s~~el~~~L~~~~~~~~  268 (286)
T 3uqc_A          245 QGDGGIR-SASTLLNLMQQATAVAD  268 (286)
T ss_dssp             CTTSSCC-CHHHHHHHHHHHHC---
T ss_pred             ccCCccC-CHHHHHHHHHHHhccCC
Confidence            9999999 99999999998766544

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=1.9e-36  Score=266.63  Aligned_cols=231  Identities=16%  Similarity=0.243  Sum_probs=173.9

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHH-ccCCCCCcceEeeeEeC-----CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLL-GRLHHRHLLALQGFSTG-----RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l-~~l~h~niv~~~~~~~~-----~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||++.. .+++.||+|.+..    ...+.+|++++ +.++||||+++++++..     ...++||||+++
T Consensus        24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~   99 (299)
T 3m2w_A           24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG   99 (299)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCS
T ss_pred             cccccCCCeEEEEEEEcCCCcEEEEEEecc----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCC
Confidence            5699999999999997 5688999999853    34577888888 55589999999997642     456799999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC---CCceeEecccccccccccCCC
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE---NFTAKLSDVGFFNSVRNYATM  193 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~---~~~~kl~dfg~~~~~~~~~~~  193 (309)
                      ++|.+++.......+++..++.++.+++.||.||   |+.+++||||||+||+++.   ++.+||+|||++.....    
T Consensus       100 ~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~----  172 (299)
T 3m2w_A          100 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL---HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTG----  172 (299)
T ss_dssp             CBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTT----
T ss_pred             CcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEEecCCCCCcEEEecccccccccc----
Confidence            9999999875556799999999999999999999   7789999999999999998   78899999998865432    


Q ss_pred             CCCCCCCCCCCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCH----HHHHHHHH
Q 021659          194 PHSSCPEDCSTQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDS----KELKKLLA  269 (309)
Q Consensus       194 ~~~~~PE~~~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~l~~  269 (309)
                               ...+.++||||||+++|+|++|+.||........      .......+.....  ....    .....+.+
T Consensus       173 ---------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  235 (299)
T 3m2w_A          173 ---------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI------SPGMKTRIRMGQY--EFPNPEWSEVSEEVKM  235 (299)
T ss_dssp             ---------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------------CCSCCSSCTTCC--SSCHHHHTTSCHHHHH
T ss_pred             ---------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh------hHHHHHHHhhccc--cCCchhcccCCHHHHH
Confidence                     1246789999999999999999999975432110      0000000000100  0111    11345667


Q ss_pred             HHHHccCCCCCCCCChHHHHH--HHhhhhcccccc
Q 021659          270 VARLCIKTKDKPTISIPQISR--YLQNEVDIQCYK  302 (309)
Q Consensus       270 l~~~cl~~dp~~Rps~~evl~--~L~~~~~~~~~~  302 (309)
                      ++.+||+.||++|||+.|+++  .+.+.......+
T Consensus       236 li~~~l~~dP~~Rps~~e~l~hp~~~~~~~~~~~~  270 (299)
T 3m2w_A          236 LIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP  270 (299)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHTSHHHHTGGGSCCCB
T ss_pred             HHHHHcccChhhCCCHHHHhcChhhcccccCCCCC
Confidence            777999999999999999996  455544444433

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=1.3e-37  Score=276.73  Aligned_cols=224  Identities=17%  Similarity=0.241  Sum_probs=180.0

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc-------cHHHHHHHHHHHccCC--CCCcceEeeeEeC-CeeEEEEe
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL-------EKDAFYREIQLLGRLH--HRHLLALQGFSTG-RKRLLVFD  112 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~-------~~~~~~~ei~~l~~l~--h~niv~~~~~~~~-~~~~lv~e  112 (309)
                      +.||+|+||.||+|.. .+++.||+|.+.....       ..+.+.+|+.++++++  |+||+++++++.. ...++|+|
T Consensus        49 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~e  128 (320)
T 3a99_A           49 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE  128 (320)
T ss_dssp             EECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEE
T ss_pred             EEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEEE
Confidence            5899999999999996 5688999999954332       1245678999999996  5999999998765 67789999


Q ss_pred             eCCC-CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeC-CCCceeEeccccccccc--
Q 021659          113 NIEN-GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLD-ENFTAKLSDVGFFNSVR--  188 (309)
Q Consensus       113 ~~~~-~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~-~~~~~kl~dfg~~~~~~--  188 (309)
                      ++.+ ++|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++ .++.+||+|||++....  
T Consensus       129 ~~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~  203 (320)
T 3a99_A          129 RPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHC---HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT  203 (320)
T ss_dssp             CCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCSS
T ss_pred             cCCCCccHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHH---HHCCcEeCCCCHHHEEEeCCCCCEEEeeCccccccccc
Confidence            9976 899999976  56799999999999999999999   778999999999999998 67899999999986543  


Q ss_pred             ---ccCCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHH
Q 021659          189 ---NYATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSK  262 (309)
Q Consensus       189 ---~~~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  262 (309)
                         ...+++.|+|||....   .++++||||||+++|+|++|+.||.......   ..     .  ..    .....   
T Consensus       204 ~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~---~~-----~--~~----~~~~~---  266 (320)
T 3a99_A          204 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII---RG-----Q--VF----FRQRV---  266 (320)
T ss_dssp             CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH---HC-----C--CC----CSSCC---
T ss_pred             cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhh---cc-----c--cc----ccccC---
Confidence               2357888999996432   2567899999999999999999997643211   00     0  00    11111   


Q ss_pred             HHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          263 ELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       263 ~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                       ...+.+++.+||+.||++|||+.|+++
T Consensus       267 -~~~~~~li~~~l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          267 -SSECQHLIRWCLALRPSDRPTFEEIQN  293 (320)
T ss_dssp             -CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence             234566777999999999999999986

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=1.3e-36  Score=269.35  Aligned_cols=234  Identities=17%  Similarity=0.226  Sum_probs=166.0

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccccH---HHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLEK---DAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~~---~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~s  118 (309)
                      +.||+|+||.||+|... +++.||+|.+.......   +.+..+..+++.++||||+++++++.+ ...++||||+ ++.
T Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~  109 (318)
T 2dyl_A           31 GEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GTC  109 (318)
T ss_dssp             EEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SEE
T ss_pred             ceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CCc
Confidence            57999999999999974 68999999986443222   234445567888899999999997765 6788999999 445


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCC-CeeecccCCCceeeCCCCceeEeccccccccc------ccC
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNL-PMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------NYA  191 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~-~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------~~~  191 (309)
                      +..+... ....+++..+..++.+++.||.||   |+. +++|+||+|+||+++.++.+||+|||++....      ...
T Consensus       110 ~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~l---H~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  185 (318)
T 2dyl_A          110 AEKLKKR-MQGPIPERILGKMTVAIVKALYYL---KEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA  185 (318)
T ss_dssp             HHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHH---HHHHCCCCCCCCGGGEEECTTSCEEECCCTTC-------------
T ss_pred             HHHHHHH-hccCCCHHHHHHHHHHHHHHHHHH---HhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCccccccC
Confidence            6555432 146789999999999999999999   553 89999999999999999999999999986432      235


Q ss_pred             CCCCCCCCCCCC-------CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHH
Q 021659          192 TMPHSSCPEDCS-------TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKEL  264 (309)
Q Consensus       192 ~~~~~~~PE~~~-------~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  264 (309)
                      +++.|+|||...       ..++++||||||+++++|++|+.||.................      .+.+....  ...
T Consensus       186 ~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~------~~~~~~~~--~~~  257 (318)
T 2dyl_A          186 GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEE------PPLLPGHM--GFS  257 (318)
T ss_dssp             -CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSC------CCCCCSSS--CCC
T ss_pred             CCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccC------CCCCCccC--CCC
Confidence            788999999753       236789999999999999999999986443333222221111      01111100  012


Q ss_pred             HHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          265 KKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       265 ~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ..+.+++.+||+.||.+|||+.++++
T Consensus       258 ~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          258 GDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             HHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhh
Confidence            34556667999999999999999884

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.3e-37  Score=275.37  Aligned_cols=225  Identities=20%  Similarity=0.237  Sum_probs=177.4

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccccc-------HHHHHHHHHHHccC----CCCCcceEeeeEeC-CeeEEE
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLE-------KDAFYREIQLLGRL----HHRHLLALQGFSTG-RKRLLV  110 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~-------~~~~~~ei~~l~~l----~h~niv~~~~~~~~-~~~~lv  110 (309)
                      +.||+|+||.||+|.. .+++.||+|.+......       ...+.+|+.++.++    +|+||+++++++.. ...++|
T Consensus        37 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~v  116 (312)
T 2iwi_A           37 PLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLV  116 (312)
T ss_dssp             EEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEEE
T ss_pred             eEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEEE
Confidence            6899999999999986 46889999998543321       22356788888888    89999999997754 677899


Q ss_pred             Eee-CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeC-CCCceeEeccccccccc
Q 021659          111 FDN-IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLD-ENFTAKLSDVGFFNSVR  188 (309)
Q Consensus       111 ~e~-~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~-~~~~~kl~dfg~~~~~~  188 (309)
                      +|+ +.+++|.+++..  ...+++..++.++.+++.||.||   |+.+++||||+|+||+++ .++.+||+|||++....
T Consensus       117 ~e~~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~  191 (312)
T 2iwi_A          117 LERPLPAQDLFDYITE--KGPLGEGPSRCFFGQVVAAIQHC---HSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLH  191 (312)
T ss_dssp             EECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHH---HHHTEECCCCSGGGEEEETTTTEEEECCCSSCEECC
T ss_pred             EEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCChhhEEEeCCCCeEEEEEcchhhhcc
Confidence            999 788999999976  46799999999999999999999   677999999999999998 78999999999986543


Q ss_pred             -----ccCCCCCCCCCCCCCCC---CCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCC
Q 021659          189 -----NYATMPHSSCPEDCSTQ---DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYD  260 (309)
Q Consensus       189 -----~~~~~~~~~~PE~~~~~---~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  260 (309)
                           ...++..|.|||.....   +.++||||||+++|+|++|+.||.......    ...          ....... 
T Consensus       192 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~----------~~~~~~~-  256 (312)
T 2iwi_A          192 DEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEIL----EAE----------LHFPAHV-  256 (312)
T ss_dssp             SSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH----HTC----------CCCCTTS-
T ss_pred             cCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHh----hhc----------cCCcccC-
Confidence                 34578899999964332   357999999999999999999997643211    100          0111111 


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          261 SKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       261 ~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                         ...+.+++.+||+.||++|||+.|+++.
T Consensus       257 ---~~~~~~li~~~l~~~p~~Rps~~e~l~~  284 (312)
T 2iwi_A          257 ---SPDCCALIRRCLAPKPSSRPSLEEILLD  284 (312)
T ss_dssp             ---CHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             ---CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence               2345667779999999999999999973

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=2e-36  Score=279.70  Aligned_cols=231  Identities=15%  Similarity=0.134  Sum_probs=172.6

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEeeCCCCCHHH
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFDNIENGSLKE  121 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~~  121 (309)
                      +.||+|+||+|+.....+++.||+|++.....  ..+.+|+.+++++ +||||+++++++.+ ...|+||||+.+ +|.+
T Consensus        30 ~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~--~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~g-~L~~  106 (432)
T 3p23_A           30 DVLGHGAEGTIVYRGMFDNRDVAVKRILPECF--SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAA-TLQE  106 (432)
T ss_dssp             EEEEECGGGCEEEEEESSSSEEEEEEECTTTE--EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHH
T ss_pred             CeeecCcCEEEEEEEEeCCeEEEEEEECHHHH--HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCCC-CHHH
Confidence            58999999997655556789999999854322  2356899999999 79999999997754 677899999975 9999


Q ss_pred             hhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC-----CceeEeccccccccc--------
Q 021659          122 HLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN-----FTAKLSDVGFFNSVR--------  188 (309)
Q Consensus       122 ~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~-----~~~kl~dfg~~~~~~--------  188 (309)
                      ++... ...+.+..+..++.|++.||.||   |+.+|+||||||+||+++.+     ..+||+|||++....        
T Consensus       107 ~l~~~-~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~  182 (432)
T 3p23_A          107 YVEQK-DFAHLGLEPITLLQQTTSGLAHL---HSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSR  182 (432)
T ss_dssp             HHHSS-SCCCCSSCHHHHHHHHHHHHHHH---HHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---------
T ss_pred             HHHhc-CCCccchhHHHHHHHHHHHHHHH---HHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceee
Confidence            99763 23344556788999999999999   77799999999999999532     357899999986543        


Q ss_pred             --ccCCCCCCCCCCCCCC-----CCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCC
Q 021659          189 --NYATMPHSSCPEDCST-----QDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYD  260 (309)
Q Consensus       189 --~~~~~~~~~~PE~~~~-----~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  260 (309)
                        ...+|+.|+|||....     .+.++|||||||++++|++ |..||...........  ......     +...  ..
T Consensus       183 ~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~--~~~~~~-----~~~~--~~  253 (432)
T 3p23_A          183 RSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANIL--LGACSL-----DCLH--PE  253 (432)
T ss_dssp             ---CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHH--TTCCCC-----TTSC--TT
T ss_pred             ccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHH--hccCCc-----cccC--cc
Confidence              2358899999997642     3568999999999999999 9999965433222111  111000     1111  11


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          261 SKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       261 ~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ......+.+++.+||+.||++|||+.|+++
T Consensus       254 ~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          254 KHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             CHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            123344567777999999999999999983

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=1.1e-36  Score=291.80  Aligned_cols=255  Identities=17%  Similarity=0.220  Sum_probs=189.2

Q ss_pred             cccccccCCCceEEEEEE-cCCcEEEEEEeccc--cccHHHHHHHHHHHccCCCCCcceEeeeEe-------CCeeEEEE
Q 021659           42 FHRIVYTNSHGAAYKARF-QDGEVALVKEIQAL--NLEKDAFYREIQLLGRLHHRHLLALQGFST-------GRKRLLVF  111 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~--~~~~~~~~~ei~~l~~l~h~niv~~~~~~~-------~~~~~lv~  111 (309)
                      +.+.||+|+||.||+|.. .+++.||+|++...  ....+.+.+|++++++++||||+++++++.       +...++||
T Consensus        18 i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVm   97 (676)
T 3qa8_A           18 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAM   97 (676)
T ss_dssp             CCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEE
T ss_pred             EEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEE
Confidence            346899999999999997 45889999988543  223457899999999999999999999753       34568999


Q ss_pred             eeCCCCCHHHhhcCCC-CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCc---eeEecccccccc
Q 021659          112 DNIENGSLKEHLNDPL-KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFT---AKLSDVGFFNSV  187 (309)
Q Consensus       112 e~~~~~sL~~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~---~kl~dfg~~~~~  187 (309)
                      ||+++++|.+++.... ...+++..++.++.+++.||.||   |+.+++||||+|+||+++.++.   +||+|||++...
T Consensus        98 Ey~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yL---Hs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~  174 (676)
T 3qa8_A           98 EYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL---HENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL  174 (676)
T ss_dssp             ECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHH---HHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBT
T ss_pred             EeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHH---HHCCCccCCCCHHHeEeecCCCceeEEEccccccccc
Confidence            9999999999997632 34689999999999999999999   6789999999999999987654   899999998754


Q ss_pred             c------ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccccccc----c----
Q 021659          188 R------NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRM----I----  251 (309)
Q Consensus       188 ~------~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~----~----  251 (309)
                      .      ...+++.|+|||...+  .+.++||||||+++|+|++|..||.+......+.............    .    
T Consensus       175 ~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~  254 (676)
T 3qa8_A          175 DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAV  254 (676)
T ss_dssp             TSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSC
T ss_pred             ccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhcccc
Confidence            3      2367889999997543  4789999999999999999999997654433322111110000000    0    


Q ss_pred             --cCc--CCCCCCHHHHHHHHHHHHHccCCCCCCCCChHH-----HHHHHhhhhccc
Q 021659          252 --DPD--LGGSYDSKELKKLLAVARLCIKTKDKPTISIPQ-----ISRYLQNEVDIQ  299 (309)
Q Consensus       252 --~~~--l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~e-----vl~~L~~~~~~~  299 (309)
                        ...  .+..........+.+++.+||..||++|||+.+     ..+.++..++..
T Consensus       255 ~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~k  311 (676)
T 3qa8_A          255 KFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLK  311 (676)
T ss_dssp             CCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCCC
T ss_pred             ccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhcc
Confidence              000  011233344567777888999999999999987     445555555443

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=8e-37  Score=297.58  Aligned_cols=226  Identities=18%  Similarity=0.236  Sum_probs=176.8

Q ss_pred             cccccCCCceEEEEEEc--CCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeC-Ce-----eEEEEee
Q 021659           44 RIVYTNSHGAAYKARFQ--DGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RK-----RLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~--~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~-----~~lv~e~  113 (309)
                      +.||+|+||.||++.+.  +++.||+|.+....  ...+.+.+|++++++++||||+++++++.. ..     .|+||||
T Consensus        86 ~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~  165 (681)
T 2pzi_A           86 GCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEY  165 (681)
T ss_dssp             EEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEEC
T ss_pred             EEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEe
Confidence            58999999999999974  58999999885332  223568899999999999999999998754 22     5899999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---cc
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---NY  190 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---~~  190 (309)
                      +++++|.+++.    ..+++..+..++.|++.||.||   |+.+|+||||||+||+++.+ .+||+|||++....   ..
T Consensus       166 ~~g~~L~~~~~----~~l~~~~~~~~~~qi~~aL~~l---H~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~~~~  237 (681)
T 2pzi_A          166 VGGQSLKRSKG----QKLPVAEAIAYLLEILPALSYL---HSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSFGYL  237 (681)
T ss_dssp             CCCEECC--------CCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECSS-CEEECCCTTCEETTCCSCC
T ss_pred             CCCCcHHHHHh----CCCCHHHHHHHHHHHHHHHHHH---HHCCCeecccChHHeEEeCC-cEEEEecccchhcccCCcc
Confidence            99999998774    3699999999999999999999   77899999999999999875 89999999987554   34


Q ss_pred             CCCCCCCCCCCCC-CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHH
Q 021659          191 ATMPHSSCPEDCS-TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLA  269 (309)
Q Consensus       191 ~~~~~~~~PE~~~-~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~  269 (309)
                      .+|+.|++||... ..+.++||||||+++++|++|..||.+...           .   .+    ............+.+
T Consensus       238 ~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~-----------~---~~----~~~~~~~~~~~~l~~  299 (681)
T 2pzi_A          238 YGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYV-----------D---GL----PEDDPVLKTYDSYGR  299 (681)
T ss_dssp             CCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEEC-----------S---SC----CTTCHHHHHCHHHHH
T ss_pred             CCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCccccc-----------c---cc----cccccccccCHHHHH
Confidence            6889999999643 347789999999999999999988764210           0   00    000011122356677


Q ss_pred             HHHHccCCCCCCCCC-hHHHHHHHhhh
Q 021659          270 VARLCIKTKDKPTIS-IPQISRYLQNE  295 (309)
Q Consensus       270 l~~~cl~~dp~~Rps-~~evl~~L~~~  295 (309)
                      ++.+||++||++||+ +.++.+.|...
T Consensus       300 li~~~l~~dP~~R~~~~~~l~~~l~~~  326 (681)
T 2pzi_A          300 LLRRAIDPDPRQRFTTAEEMSAQLTGV  326 (681)
T ss_dssp             HHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             HHhhhccCChhhCCCHHHHHHHHHHHH
Confidence            888999999999995 55666666554

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=1.2e-34  Score=266.42  Aligned_cols=225  Identities=14%  Similarity=0.092  Sum_probs=164.0

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc----ccHHHHHHHHHHHccCCC-CCcceE---------e---------
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN----LEKDAFYREIQLLGRLHH-RHLLAL---------Q---------   99 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h-~niv~~---------~---------   99 (309)
                      +.||+|+||.||+|.+ .+++.||+|++....    ...+.+.+|+.+++.++| +|....         .         
T Consensus        84 ~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (413)
T 3dzo_A           84 TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKK  163 (413)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC--
T ss_pred             cccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCCC
Confidence            4799999999999996 568999999986222    224678999999999976 322111         1         


Q ss_pred             ---eeEeC------CeeEEEEeeCCCCCHHHhhc-----CCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCC
Q 021659          100 ---GFSTG------RKRLLVFDNIENGSLKEHLN-----DPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISS  165 (309)
Q Consensus       100 ---~~~~~------~~~~lv~e~~~~~sL~~~i~-----~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p  165 (309)
                         .+...      ...+++|+.+ +++|.+++.     ......+++..++.++.|++.||.||   |+.+|+||||||
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~iiHrDiKp  239 (413)
T 3dzo_A          164 KMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASL---HHYGLVHTYLRP  239 (413)
T ss_dssp             -------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHH---HHTTEECSCCCG
T ss_pred             ccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCccc
Confidence               11111      1234555654 569999884     22345678889999999999999999   778999999999


Q ss_pred             CceeeCCCCceeEeccccccccc----ccCCCCCCCCCCCC----------CC--CCCCCcEeehhhHHHHHHhCCCCCC
Q 021659          166 SSIMLDENFTAKLSDVGFFNSVR----NYATMPHSSCPEDC----------ST--QDCSNIIFQLGVLILELVTGQSPEE  229 (309)
Q Consensus       166 ~nill~~~~~~kl~dfg~~~~~~----~~~~~~~~~~PE~~----------~~--~~~~~Dv~slG~~l~~l~tg~~p~~  229 (309)
                      +|||++.++.+||+|||++....    ...+ +.|+|||..          ..  .+.++|||||||++|+|++|+.||.
T Consensus       240 ~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~  318 (413)
T 3dzo_A          240 VDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNT  318 (413)
T ss_dssp             GGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCC
T ss_pred             ceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence            99999999999999999986543    3356 899999965          22  3568999999999999999999997


Q ss_pred             CCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHH
Q 021659          230 GDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQIS  289 (309)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl  289 (309)
                      .....          .....+....  ...    ...+.+++.+||+.||++||++.+++
T Consensus       319 ~~~~~----------~~~~~~~~~~--~~~----~~~~~~li~~~l~~dP~~Rpt~~~~l  362 (413)
T 3dzo_A          319 DDAAL----------GGSEWIFRSC--KNI----PQPVRALLEGFLRYPKEDRLLPLQAM  362 (413)
T ss_dssp             TTGGG----------SCSGGGGSSC--CCC----CHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred             Ccchh----------hhHHHHHhhc--ccC----CHHHHHHHHHHccCChhhCcCHHHHH
Confidence            64321          1111111111  111    14566667799999999999987765

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=1.7e-34  Score=258.16  Aligned_cols=231  Identities=12%  Similarity=0.042  Sum_probs=172.0

Q ss_pred             ccccccCCCceEEEEEEcCCcEEEEEEeccccc---------cHHHHHHHHHHHccCC---------CCCcceEeeeEe-
Q 021659           43 HRIVYTNSHGAAYKARFQDGEVALVKEIQALNL---------EKDAFYREIQLLGRLH---------HRHLLALQGFST-  103 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~---------~~~~~~~ei~~l~~l~---------h~niv~~~~~~~-  103 (309)
                      .+.||+|+||.||+|+. +++.||+|++.....         ..+.+.+|+.+++.++         ||||+.+.+.+. 
T Consensus        25 ~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~  103 (336)
T 2vuw_A           25 CEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCV  103 (336)
T ss_dssp             CEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEE
T ss_pred             eeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEe
Confidence            36899999999999998 689999999964321         2367889999888885         777777776421 


Q ss_pred             ------------------------------CCeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhc
Q 021659          104 ------------------------------GRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLF  153 (309)
Q Consensus       104 ------------------------------~~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~  153 (309)
                                                    +...|+||||+++|++.+.+..   ..+++..+..++.|++.||.||   
T Consensus       104 ~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL~~l---  177 (336)
T 2vuw_A          104 QGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASLAVA---  177 (336)
T ss_dssp             ESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHHHHH---
T ss_pred             cCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHHHHH---
Confidence                                          4678999999999977666643   5689999999999999999999   


Q ss_pred             C-CCCeeecccCCCceeeCCCC--------------------ceeEeccccccccc--ccCCCCCCCCCCCCCCC-CCCC
Q 021659          154 S-NLPMYYVSISSSSIMLDENF--------------------TAKLSDVGFFNSVR--NYATMPHSSCPEDCSTQ-DCSN  209 (309)
Q Consensus       154 h-~~~i~H~dl~p~nill~~~~--------------------~~kl~dfg~~~~~~--~~~~~~~~~~PE~~~~~-~~~~  209 (309)
                      | +.+|+||||||+|||++.++                    .+||+|||+++...  ...+|+.|+|||...+. +.++
T Consensus       178 H~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~g~~~~~~  257 (336)
T 2vuw_A          178 EASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTGDGDYQF  257 (336)
T ss_dssp             HHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGCCCSSHHH
T ss_pred             HHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhhhcCCCccce
Confidence            6 78999999999999999887                    89999999997654  34689999999976543 7789


Q ss_pred             cEeehhhH-HHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHH
Q 021659          210 IIFQLGVL-ILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQI  288 (309)
Q Consensus       210 Dv~slG~~-l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~ev  288 (309)
                      ||||||++ .+++++|..||...................    ...............+.+++.+||++|     |+.|+
T Consensus       258 Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~  328 (336)
T 2vuw_A          258 DIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTF----KTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDL  328 (336)
T ss_dssp             HHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCC----SSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHH
T ss_pred             ehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhcc----CcccchhhhhhcCHHHHHHHHHHhccC-----CHHHH
Confidence            99998777 677888999985421101111111000000    011111112234667788888999977     88888


Q ss_pred             H
Q 021659          289 S  289 (309)
Q Consensus       289 l  289 (309)
                      +
T Consensus       329 l  329 (336)
T 2vuw_A          329 L  329 (336)
T ss_dssp             H
T ss_pred             H
Confidence            7

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.95  E-value=1.5e-29  Score=240.90  Aligned_cols=175  Identities=17%  Similarity=0.113  Sum_probs=122.7

Q ss_pred             ccccCCCceEEEEE-EcCCcEEEEEEecccc-----------ccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEE
Q 021659           45 IVYTNSHGAAYKAR-FQDGEVALVKEIQALN-----------LEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLV  110 (309)
Q Consensus        45 ~lg~G~~~~v~~~~-~~~~~~va~K~~~~~~-----------~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv  110 (309)
                      ..+.|+.|....++ +--|+.+++|.+....           ...++|.+|+++|+++ .|+||+++++++.+ ...|+|
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV  320 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV  320 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence            45666666555544 3357889999985321           1235699999999999 69999999998876 788999


Q ss_pred             EeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-
Q 021659          111 FDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-  189 (309)
Q Consensus       111 ~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-  189 (309)
                      |||++|++|.+++..  .++++..   +++.||+.||+|+   |++||+||||||+|||++.++.+||+|||+++.... 
T Consensus       321 MEyv~G~~L~d~i~~--~~~l~~~---~I~~QIl~AL~yl---H~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~  392 (569)
T 4azs_A          321 MEKLPGRLLSDMLAA--GEEIDRE---KILGSLLRSLAAL---EKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD  392 (569)
T ss_dssp             EECCCSEEHHHHHHT--TCCCCHH---HHHHHHHHHHHHH---HHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred             EecCCCCcHHHHHHh--CCCCCHH---HHHHHHHHHHHHH---HHCCceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence            999999999999987  5667654   5889999999999   888999999999999999999999999999875532 


Q ss_pred             ------cCCCCCCCCCCCCCC-CCCCCcEeehhhHHHHHHhCCCC
Q 021659          190 ------YATMPHSSCPEDCST-QDCSNIIFQLGVLILELVTGQSP  227 (309)
Q Consensus       190 ------~~~~~~~~~PE~~~~-~~~~~Dv~slG~~l~~l~tg~~p  227 (309)
                            ..+|+.|++||...+ ...++|+||+|++++++.++..+
T Consensus       393 ~~~~~t~vGTp~YmAPE~l~g~~~~~~d~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          393 CSWPTNLVQSFFVFVNELFAENKSWNGFWRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             -CCSHHHHHHHHHHHHHHC-----------------CCCCTTHHH
T ss_pred             CccccCceechhhccHHHhCCCCCCcccccccccchhhhccccch
Confidence                  257789999997655 36789999999988877555443

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.89  E-value=1.7e-24  Score=204.92  Aligned_cols=169  Identities=13%  Similarity=0.120  Sum_probs=131.0

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccc---------cHHHHHHHHHHHccCCCCCcceEeeeE-eCCeeEEEEee
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNL---------EKDAFYREIQLLGRLHHRHLLALQGFS-TGRKRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~---------~~~~~~~ei~~l~~l~h~niv~~~~~~-~~~~~~lv~e~  113 (309)
                      +.||+|+||.||++.. .++.+++|.......         ..+++.+|++++++++||||+.+..++ .....++||||
T Consensus       342 ~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~  420 (540)
T 3en9_A          342 HLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSY  420 (540)
T ss_dssp             ------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEEC
T ss_pred             CEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEEC
Confidence            5799999999999965 466777887532111         124578999999999999999544433 34567999999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc----
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN----  189 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~----  189 (309)
                      +++++|.+++..          +..++.|+++||.||   |+++|+||||||+||+++.  .+||+|||+++....    
T Consensus       421 ~~ggsL~~~l~~----------~~~i~~qi~~aL~~L---H~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~  485 (540)
T 3en9_A          421 INGKLAKDVIED----------NLDIAYKIGEIVGKL---HKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDK  485 (540)
T ss_dssp             CCSEEHHHHSTT----------CTHHHHHHHHHHHHH---HHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHH
T ss_pred             CCCCCHHHHHHH----------HHHHHHHHHHHHHHH---HHCcCccCCCCHHHEEECC--eEEEEECccCEECCCcccc
Confidence            999999999874          568999999999999   7789999999999999998  999999999976542    


Q ss_pred             ----------cCCCCCCCCCCCCCC----CCCCCcEeehhhHHHHHHhCCCCC
Q 021659          190 ----------YATMPHSSCPEDCST----QDCSNIIFQLGVLILELVTGQSPE  228 (309)
Q Consensus       190 ----------~~~~~~~~~PE~~~~----~~~~~Dv~slG~~l~~l~tg~~p~  228 (309)
                                ..+|+.|+|||....    ++...|+||..+-.++-+.++.+|
T Consensus       486 ~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          486 AVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             ccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence                      357899999997543    456689999888888877776665

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.86  E-value=3.9e-22  Score=173.79  Aligned_cols=136  Identities=10%  Similarity=0.037  Sum_probs=110.5

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccc-------------------cHHHHHHHHHHHccCCCCCcceEeeeEeC
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNL-------------------EKDAFYREIQLLGRLHHRHLLALQGFSTG  104 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~-------------------~~~~~~~ei~~l~~l~h~niv~~~~~~~~  104 (309)
                      +.||+|+||.||+|...+++.||+|.+.....                   ....+.+|++++++++  | +++.+++..
T Consensus        96 ~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~~  172 (282)
T 1zar_A           96 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYAW  172 (282)
T ss_dssp             EEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEEE
T ss_pred             CEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEec
Confidence            68999999999999997789999999853221                   2356889999999999  5 666666655


Q ss_pred             CeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccc
Q 021659          105 RKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFF  184 (309)
Q Consensus       105 ~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~  184 (309)
                      ...++||||+++++|.+ +..        .....++.|++.||.+|   |+.+++||||||+||+++ ++.+||+|||++
T Consensus       173 ~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~l---H~~giiHrDlkp~NILl~-~~~vkl~DFG~a  239 (282)
T 1zar_A          173 EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKF---YHRGIVHGDLSQYNVLVS-EEGIWIIDFPQS  239 (282)
T ss_dssp             ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHH---HHTTEECSCCSTTSEEEE-TTEEEECCCTTC
T ss_pred             cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHH---HHCCCEeCCCCHHHEEEE-CCcEEEEECCCC
Confidence            66799999999999998 532        12457999999999999   788999999999999999 999999999998


Q ss_pred             ccccccCCCCCCCCCCC
Q 021659          185 NSVRNYATMPHSSCPED  201 (309)
Q Consensus       185 ~~~~~~~~~~~~~~PE~  201 (309)
                      ...      ..+.+||.
T Consensus       240 ~~~------~~~~a~e~  250 (282)
T 1zar_A          240 VEV------GEEGWREI  250 (282)
T ss_dssp             EET------TSTTHHHH
T ss_pred             eEC------CCCCHHHH
Confidence            643      33456664

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.79  E-value=1.5e-19  Score=155.35  Aligned_cols=132  Identities=18%  Similarity=0.113  Sum_probs=102.4

Q ss_pred             ccccccCCCceEEEEEE-cCCcE--EEEEEecccccc-------------------------HHHHHHHHHHHccCCCCC
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEV--ALVKEIQALNLE-------------------------KDAFYREIQLLGRLHHRH   94 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~--va~K~~~~~~~~-------------------------~~~~~~ei~~l~~l~h~n   94 (309)
                      .+.||+|+||.||+|.. .+|+.  ||+|++......                         ...+.+|+..+.++.|++
T Consensus        52 ~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~  131 (258)
T 1zth_A           52 GGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAG  131 (258)
T ss_dssp             EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCC
Confidence            35799999999999997 77888  999986432111                         135788999999998775


Q ss_pred             c--ceEeeeEeCCeeEEEEeeCCC-C----CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcC-CCCeeecccCCC
Q 021659           95 L--LALQGFSTGRKRLLVFDNIEN-G----SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFS-NLPMYYVSISSS  166 (309)
Q Consensus        95 i--v~~~~~~~~~~~~lv~e~~~~-~----sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h-~~~i~H~dl~p~  166 (309)
                      +  ..++++   ...++||||+.+ |    +|.+....     .++..+..++.+++.||.+|   | ..+++||||||.
T Consensus       132 i~~p~~~~~---~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~l---H~~~givHrDlkp~  200 (258)
T 1zth_A          132 VSVPQPYTY---MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRL---YQEAELVHADLSEY  200 (258)
T ss_dssp             CCCCCEEEE---ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHH---HHTSCEECSSCSTT
T ss_pred             CCCCeEEEc---CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHH---HHHCCEEeCCCCHH
Confidence            4  334432   356899999942 3    77776532     23446788999999999999   6 889999999999


Q ss_pred             ceeeCCCCceeEecccccccc
Q 021659          167 SIMLDENFTAKLSDVGFFNSV  187 (309)
Q Consensus       167 nill~~~~~~kl~dfg~~~~~  187 (309)
                      |||++.  .++|+|||++...
T Consensus       201 NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          201 NIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             SEEESS--SEEECCCTTCEET
T ss_pred             HEEEcC--cEEEEECcccccC
Confidence            999988  9999999998653

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.63  E-value=2.4e-16  Score=141.69  Aligned_cols=128  Identities=8%  Similarity=0.046  Sum_probs=93.6

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEecccccc---------------HHH--------HHHHHHHHccCCCCCcc--eE
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLE---------------KDA--------FYREIQLLGRLHHRHLL--AL   98 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~---------------~~~--------~~~ei~~l~~l~h~niv--~~   98 (309)
                      ..||+|++|.||+|...+|+.||+|++......               ...        ..+|...|.+|.+.++.  ..
T Consensus       101 ~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp~p  180 (397)
T 4gyi_A          101 SRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVPEP  180 (397)
T ss_dssp             EEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCE
T ss_pred             CEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCCee
Confidence            589999999999999888999999987422110               111        23566677777443332  22


Q ss_pred             eeeEeCCeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCC----
Q 021659           99 QGFSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENF----  174 (309)
Q Consensus        99 ~~~~~~~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~----  174 (309)
                      +++   ...++||||+++++|.++...        .....++.|++.+|.+|   |..|++||||||.|||++.++    
T Consensus       181 ~~~---~~~~LVME~i~G~~L~~l~~~--------~~~~~l~~qll~~l~~l---H~~gIVHrDLKp~NILl~~dgd~~d  246 (397)
T 4gyi_A          181 IAQ---SRHTIVMSLVDALPMRQVSSV--------PDPASLYADLIALILRL---AKHGLIHGDFNEFNILIREEKDAED  246 (397)
T ss_dssp             EEE---ETTEEEEECCSCEEGGGCCCC--------SCHHHHHHHHHHHHHHH---HHTTEECSCCSTTSEEEEEEECSSC
T ss_pred             eec---cCceEEEEecCCccHhhhccc--------HHHHHHHHHHHHHHHHH---HHCCCcCCCCCHHHEEEeCCCCccc
Confidence            222   224799999999898765432        12456789999999999   677999999999999998776    


Q ss_pred             ------ceeEecccccc
Q 021659          175 ------TAKLSDVGFFN  185 (309)
Q Consensus       175 ------~~kl~dfg~~~  185 (309)
                            .+.|+||+.+.
T Consensus       247 ~~~~~~~~~iID~~Q~V  263 (397)
T 4gyi_A          247 PSSITLTPIIIXFPQMV  263 (397)
T ss_dssp             TTSEEEEEEECCCTTCE
T ss_pred             ccccccceEEEEeCCcc
Confidence                  38899999764

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.24  E-value=3e-11  Score=103.36  Aligned_cols=135  Identities=14%  Similarity=0.058  Sum_probs=101.4

Q ss_pred             ccccccCCCceEEEEEEcCCcEEEEEEecccc-ccHHHHHHHHHHHccCC-CCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           43 HRIVYTNSHGAAYKARFQDGEVALVKEIQALN-LEKDAFYREIQLLGRLH-HRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~-~~~~~~~~ei~~l~~l~-h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      ...++.|+.+.||++... ++.+++|...... .....+.+|++.++.|. +.++.++++++.+ ...|+|||+++|.+|
T Consensus        19 ~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l   97 (263)
T 3tm0_A           19 VKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLC   97 (263)
T ss_dssp             EECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEH
T ss_pred             EeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeeh
Confidence            356777888999999754 6788999875421 23346889999999885 6677888887654 678899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhc----------------------------------------------
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLF----------------------------------------------  153 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~----------------------------------------------  153 (309)
                      .+....       ......++.++..++..||..                                              
T Consensus        98 ~~~~~~-------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  170 (263)
T 3tm0_A           98 SEEYED-------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPREL  170 (263)
T ss_dssp             HHHCCT-------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHH
T ss_pred             hhccCC-------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHH
Confidence            886421       112346788888999999861                                              


Q ss_pred             ----------CCCCeeecccCCCceeeCCCCceeEecccccc
Q 021659          154 ----------SNLPMYYVSISSSSIMLDENFTAKLSDVGFFN  185 (309)
Q Consensus       154 ----------h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~  185 (309)
                                ....++|||++|.||+++.+..+.|+||+.+.
T Consensus       171 ~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          171 YDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             HHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             HHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence                      11558999999999999776556799998654

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.14  E-value=8.2e-11  Score=100.13  Aligned_cols=127  Identities=17%  Similarity=0.135  Sum_probs=91.0

Q ss_pred             ccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCC--cceEeeeEeC-CeeEEEEeeCCCCCHHHhh
Q 021659           47 YTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRH--LLALQGFSTG-RKRLLVFDNIENGSLKEHL  123 (309)
Q Consensus        47 g~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~n--iv~~~~~~~~-~~~~lv~e~~~~~sL~~~i  123 (309)
                      +.|..+.||++...+|..+++|.....  ....+..|++.++.+.+.+  +.+++++... +..++||||++|.+|.  .
T Consensus        29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~  104 (264)
T 1nd4_A           29 IGCSDAAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--S  104 (264)
T ss_dssp             CTTSSCEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--T
T ss_pred             cCCCCceEEEEecCCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--c
Confidence            355669999998777778899987543  2345788999998885434  4557776654 5678999999998884  2


Q ss_pred             cCCCCCCCCHHHHHHHHHHHHHHHhhhhhcC-------------------------------------------------
Q 021659          124 NDPLKTPLDWKTRLQIAIGVAAALEYLLLFS-------------------------------------------------  154 (309)
Q Consensus       124 ~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h-------------------------------------------------  154 (309)
                      ..     .+   ...++.+++..|..||...                                                 
T Consensus       105 ~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  176 (264)
T 1nd4_A          105 SH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKA  176 (264)
T ss_dssp             SC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHH
T ss_pred             Cc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHH
Confidence            21     11   2245677777777775421                                                 


Q ss_pred             ------CCCeeecccCCCceeeCCCCceeEecccccc
Q 021659          155 ------NLPMYYVSISSSSIMLDENFTAKLSDVGFFN  185 (309)
Q Consensus       155 ------~~~i~H~dl~p~nill~~~~~~kl~dfg~~~  185 (309)
                            ...++|||++|.||+++.++.+.|+||+.+.
T Consensus       177 ~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~  213 (264)
T 1nd4_A          177 RMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG  213 (264)
T ss_dssp             TCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             hcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence                  1239999999999999876666799999764

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.07  E-value=4.8e-10  Score=100.43  Aligned_cols=138  Identities=7%  Similarity=0.051  Sum_probs=102.3

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEec--ccc--ccHHHHHHHHHHHccCC--CCCcceEeeeEeCC----eeEEEEee
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQ--ALN--LEKDAFYREIQLLGRLH--HRHLLALQGFSTGR----KRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~--~~~--~~~~~~~~ei~~l~~l~--h~niv~~~~~~~~~----~~~lv~e~  113 (309)
                      +.++.|.++.+|+....+ ..+++|+..  ...  .....+.+|+.+++.|.  +.++.+++.++.+.    ..|+||||
T Consensus        44 ~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~  122 (359)
T 3dxp_A           44 EQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF  122 (359)
T ss_dssp             EECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred             EEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence            468899999999998754 567778665  322  12346788999999886  45678888887653    47899999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcC---------------------------------------
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFS---------------------------------------  154 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h---------------------------------------  154 (309)
                      ++|.++.+..    ...++...+..++.+++.+|..||...                                       
T Consensus       123 v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (359)
T 3dxp_A          123 VSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMD  198 (359)
T ss_dssp             CCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHH
T ss_pred             cCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHH
Confidence            9998775422    234778888899999999999998621                                       


Q ss_pred             ----------------CCCeeecccCCCceeeCCCCc--eeEeccccccc
Q 021659          155 ----------------NLPMYYVSISSSSIMLDENFT--AKLSDVGFFNS  186 (309)
Q Consensus       155 ----------------~~~i~H~dl~p~nill~~~~~--~kl~dfg~~~~  186 (309)
                                      ...++|||++|.||+++.++.  +.|+||+.+..
T Consensus       199 ~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          199 SLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             HHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             HHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                            257999999999999987653  68999998753

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.75  E-value=3.3e-09  Score=92.72  Aligned_cols=176  Identities=16%  Similarity=0.076  Sum_probs=114.4

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCC-CCC--cceEeeeEeC----CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLH-HRH--LLALQGFSTG----RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~-h~n--iv~~~~~~~~----~~~~lv~e~~~~  116 (309)
                      +.++.|..+.||+..    +.+++|..... .....+.+|++.++.+. +..  +..++.+..+    ...|+||++++|
T Consensus        26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G  100 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKG  100 (304)
T ss_dssp             CEEEECSSEEEEEST----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCC
T ss_pred             EecCCCCcceEEEEC----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCC
Confidence            358889999999863    45778875432 23467889999998883 322  3444444332    234789999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhc-------------------------------------------
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLF-------------------------------------------  153 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~-------------------------------------------  153 (309)
                      .++.+...    ..++..++..++.+++..+..||..                                           
T Consensus       101 ~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  176 (304)
T 3sg8_A          101 VPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDF  176 (304)
T ss_dssp             EECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHH
T ss_pred             eECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHH
Confidence            88865332    2356667777777777777777641                                           


Q ss_pred             ------------CCCCeeecccCCCceeeCC--CCceeEeccccccccccc---CCCCCC---CCCCC----CCCCC---
Q 021659          154 ------------SNLPMYYVSISSSSIMLDE--NFTAKLSDVGFFNSVRNY---ATMPHS---SCPED----CSTQD---  206 (309)
Q Consensus       154 ------------h~~~i~H~dl~p~nill~~--~~~~kl~dfg~~~~~~~~---~~~~~~---~~PE~----~~~~~---  206 (309)
                                  ....++|||++|.||+++.  ...+.++||+.+......   ......   ..|+.    ...+.   
T Consensus       177 ~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~  256 (304)
T 3sg8_A          177 YRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKD  256 (304)
T ss_dssp             HHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSC
T ss_pred             HHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCC
Confidence                        1246899999999999987  456789999987543211   011111   12221    00001   


Q ss_pred             ---------CCCcEeehhhHHHHHHhCCCCC
Q 021659          207 ---------CSNIIFQLGVLILELVTGQSPE  228 (309)
Q Consensus       207 ---------~~~Dv~slG~~l~~l~tg~~p~  228 (309)
                               .-.+.|+++.+++.+.+|..+|
T Consensus       257 ~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          257 IPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence                     1147899999999999998875

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.52  E-value=1.4e-06  Score=76.02  Aligned_cols=133  Identities=14%  Similarity=0.076  Sum_probs=88.8

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCC---CcceEeeeEe--CCeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHR---HLLALQGFST--GRKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~---niv~~~~~~~--~~~~~lv~e~~~~~s  118 (309)
                      +.++.|..+.||+.    ++.+++|.... ......+.+|.++|+.|.+.   .+..++.++.  ++..++||++++|.+
T Consensus        25 ~~l~~G~~n~v~~v----g~~~VlR~~~~-~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~   99 (306)
T 3tdw_A           25 ESLGEGFRNYAILV----NGDWVFRFPKS-QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQI   99 (306)
T ss_dssp             EEEEECSSEEEEEE----TTTEEEEEESS-HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEE
T ss_pred             eecCCCcceeEEEE----CCEEEEEecCC-chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeE
Confidence            34778888899988    45577887432 22345788999999999642   2455666654  355789999999988


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhc---------------------------------------------
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLF---------------------------------------------  153 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~---------------------------------------------  153 (309)
                      +.+..-    ..++......++.++...|..||..                                             
T Consensus       100 l~~~~~----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~  175 (306)
T 3tdw_A          100 LGEDGM----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLR  175 (306)
T ss_dssp             CHHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHH
T ss_pred             Cchhhh----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHH
Confidence            876321    1234444444555555555555432                                             


Q ss_pred             ------------CCCCeeecccCCCceeeCC---CCc-eeEecccccc
Q 021659          154 ------------SNLPMYYVSISSSSIMLDE---NFT-AKLSDVGFFN  185 (309)
Q Consensus       154 ------------h~~~i~H~dl~p~nill~~---~~~-~kl~dfg~~~  185 (309)
                                  ....++|||++|.||+++.   ++. +.|+||+.+.
T Consensus       176 ~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~  223 (306)
T 3tdw_A          176 FQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAA  223 (306)
T ss_dssp             HHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCE
T ss_pred             HHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcC
Confidence                        2346799999999999987   355 4799998764

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.26  E-value=3.1e-06  Score=75.29  Aligned_cols=78  Identities=8%  Similarity=0.016  Sum_probs=53.4

Q ss_pred             ccc-ccCCCceEEEEEEc-------CCcEEEEEEecccc---c-cHHHHHHHHHHHccCC-C--CCcceEeeeEeCC---
Q 021659           44 RIV-YTNSHGAAYKARFQ-------DGEVALVKEIQALN---L-EKDAFYREIQLLGRLH-H--RHLLALQGFSTGR---  105 (309)
Q Consensus        44 ~~l-g~G~~~~v~~~~~~-------~~~~va~K~~~~~~---~-~~~~~~~ei~~l~~l~-h--~niv~~~~~~~~~---  105 (309)
                      +.| +.|..+.+|+....       +++.+++|......   . ....+.+|+.+++.|. +  -.+.+++.++.+.   
T Consensus        26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~  105 (357)
T 3ats_A           26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL  105 (357)
T ss_dssp             EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred             EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence            356 78888999998764       25678888764332   1 1245778888888884 3  3566778776543   


Q ss_pred             -eeEEEEeeCCCCCHHH
Q 021659          106 -KRLLVFDNIENGSLKE  121 (309)
Q Consensus       106 -~~~lv~e~~~~~sL~~  121 (309)
                       ..++|||+++|.++.+
T Consensus       106 g~~~~v~e~l~G~~l~~  122 (357)
T 3ats_A          106 GTPFFLMDYVEGVVPPD  122 (357)
T ss_dssp             SSCEEEEECCCCBCCCB
T ss_pred             CCceEEEEecCCCChhh
Confidence             4689999999876543

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.25  E-value=5.3e-06  Score=70.74  Aligned_cols=133  Identities=16%  Similarity=0.100  Sum_probs=88.0

Q ss_pred             ccccCCCc-eEEEEEEc-CCcEEEEEEeccccccHHHHHHHHHHHccCC-CCCcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           45 IVYTNSHG-AAYKARFQ-DGEVALVKEIQALNLEKDAFYREIQLLGRLH-HRHLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        45 ~lg~G~~~-~v~~~~~~-~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~-h~niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      .+..|..+ .||+.... ++..+++|.....  ....+.+|...|+.|. +-.+.++++++.+ +..++|||+++|.++.
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~  108 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAF  108 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHH
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccc
Confidence            44555554 68988754 4566788875432  2456888999998885 3346677777654 6789999999998877


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhc-----------------------------------------------
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLF-----------------------------------------------  153 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~-----------------------------------------------  153 (309)
                      +.....      ......+..++...|..||..                                               
T Consensus       109 ~~~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (272)
T 4gkh_A          109 QVLEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKE  182 (272)
T ss_dssp             HHHHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHH
T ss_pred             ccccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHH
Confidence            654320      111223444444445555421                                               


Q ss_pred             --------CCCCeeecccCCCceeeCCCCceeEecccccc
Q 021659          154 --------SNLPMYYVSISSSSIMLDENFTAKLSDVGFFN  185 (309)
Q Consensus       154 --------h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~  185 (309)
                              +...++|||+.|.||+++.++.+-|+||+.+.
T Consensus       183 l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~  222 (272)
T 4gkh_A          183 MHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG  222 (272)
T ss_dssp             HHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             HHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence                    12247899999999999877667799998764

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.03  E-value=2e-05  Score=71.14  Aligned_cols=73  Identities=12%  Similarity=0.052  Sum_probs=47.7

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccc--------ccHHHHHHHHHHHccCCC--CC-cceEeeeEeCCeeEEEE
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALN--------LEKDAFYREIQLLGRLHH--RH-LLALQGFSTGRKRLLVF  111 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~--------~~~~~~~~ei~~l~~l~h--~n-iv~~~~~~~~~~~~lv~  111 (309)
                      +.+|.|..+.||++... +++.+++|......        ...+++..|.++++.+..  +. +..++.+ .....++||
T Consensus        36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~-d~~~~~lvm  114 (397)
T 2olc_A           36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS-DTEMAVTVM  114 (397)
T ss_dssp             EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE-ETTTTEEEE
T ss_pred             EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE-cCCccEEEE
Confidence            46899999999999753 46788899753211        123456788888887732  33 3355544 445568999


Q ss_pred             eeCCCC
Q 021659          112 DNIENG  117 (309)
Q Consensus       112 e~~~~~  117 (309)
                      |++++.
T Consensus       115 E~l~g~  120 (397)
T 2olc_A          115 EDLSHL  120 (397)
T ss_dssp             CCCTTS
T ss_pred             EeCCCc
Confidence            999763

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=97.99  E-value=5.4e-05  Score=66.50  Aligned_cols=137  Identities=15%  Similarity=0.170  Sum_probs=76.7

Q ss_pred             ccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCC-----CCCcceEe-e--e-EeCCeeEEEEeeCC
Q 021659           45 IVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLH-----HRHLLALQ-G--F-STGRKRLLVFDNIE  115 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~-----h~niv~~~-~--~-~~~~~~~lv~e~~~  115 (309)
                      .++.|..+.||+....++ .+++|....   ....+..|.++++.|.     .|.++... |  + ...+..+++++|++
T Consensus        39 ~l~gG~~n~~~~v~~~~~-~~vlk~~~~---~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i~  114 (346)
T 2q83_A           39 VIQGNQMALVWKVHTDSG-AVCLKRIHR---PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWIE  114 (346)
T ss_dssp             ECC----CEEEEEEETTE-EEEEEEECS---CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECCC
T ss_pred             eccccccCcEEEEEeCCC-CEEEEecCC---CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEeec
Confidence            455677899999987555 478888754   2344555666666553     24333311 1  1 13466789999999


Q ss_pred             CCCHH-----H---------hhc---CCC--C-------CCCCHHHH-------------------------------HH
Q 021659          116 NGSLK-----E---------HLN---DPL--K-------TPLDWKTR-------------------------------LQ  138 (309)
Q Consensus       116 ~~sL~-----~---------~i~---~~~--~-------~~l~~~~~-------------------------------~~  138 (309)
                      |.++.     +         .+.   ...  .       ....|...                               ..
T Consensus       115 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  194 (346)
T 2q83_A          115 GRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEIDG  194 (346)
T ss_dssp             CBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHH
T ss_pred             CccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHH
Confidence            86542     0         010   100  0       01122111                               01


Q ss_pred             HHHHHHHHHhhhhh----------cCCCCeeecccCCCceeeCCCCceeEecccccc
Q 021659          139 IAIGVAAALEYLLL----------FSNLPMYYVSISSSSIMLDENFTAKLSDVGFFN  185 (309)
Q Consensus       139 i~~~i~~~l~~lh~----------~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~  185 (309)
                      +...+..++.+|+.          .....++|||+++.||+++.++.+.++||+.+.
T Consensus       195 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          195 FIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             HHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             HHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence            11123334555542          135789999999999999888889999998653

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.72  E-value=0.00026  Score=61.76  Aligned_cols=73  Identities=12%  Similarity=0.185  Sum_probs=55.5

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCC---CCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLH---HRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~---h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      +.++.|..+.+|+... +++.+++|.....  ....+..|.+.|+.|.   ...+.+++.++.. ...++|||++++.++
T Consensus        42 ~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~  118 (312)
T 3jr1_A           42 EKLYSGEMNEIWLIND-EVQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN  118 (312)
T ss_dssp             EEECCSSSSEEEEEES-SSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred             EEeCCccceeeeEEEE-CCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence            4688899999999986 4567778876533  3567889999998884   3567778887654 678899999998754

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=97.61  E-value=0.00022  Score=64.82  Aligned_cols=32  Identities=13%  Similarity=0.166  Sum_probs=27.9

Q ss_pred             CCCCeeecccCCCceeeCCCCceeEeccccccc
Q 021659          154 SNLPMYYVSISSSSIMLDENFTAKLSDVGFFNS  186 (309)
Q Consensus       154 h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~  186 (309)
                      +...++|||++|.||+++.++ +.++||+.+..
T Consensus       230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~  261 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY  261 (420)
T ss_dssp             BCCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred             CCCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence            568899999999999998776 99999987753

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=97.59  E-value=0.00033  Score=60.23  Aligned_cols=72  Identities=17%  Similarity=0.185  Sum_probs=52.1

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEecccc-ccHHHHHHHHHHHccCC-C--CCcceEeeeEeCCeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALN-LEKDAFYREIQLLGRLH-H--RHLLALQGFSTGRKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~-~~~~~~~~ei~~l~~l~-h--~niv~~~~~~~~~~~~lv~e~~~~~s  118 (309)
                      +.+|.|..+.||+....||+.+.+|+..... .....+..|++.|+.|. .  -.+..++++..   .++|||+++++.
T Consensus        21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~~---~~lv~e~l~~~~   96 (288)
T 3f7w_A           21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWDD---RTLAMEWVDERP   96 (288)
T ss_dssp             EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEET---TEEEEECCCCCC
T ss_pred             EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEeccC---ceEEEEeecccC
Confidence            4689999999999999999999999864332 22346788999998884 2  23445555432   478999998654

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=97.51  E-value=0.00031  Score=63.00  Aligned_cols=138  Identities=14%  Similarity=0.076  Sum_probs=81.2

Q ss_pred             ccccCCCceEEEEEEc--------CCcEEEEEEeccccccHHHHHHHHHHHccCC-CCCcceEeeeEeCCeeEEEEeeCC
Q 021659           45 IVYTNSHGAAYKARFQ--------DGEVALVKEIQALNLEKDAFYREIQLLGRLH-HRHLLALQGFSTGRKRLLVFDNIE  115 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~--------~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~-h~niv~~~~~~~~~~~~lv~e~~~  115 (309)
                      .+..|-.+.+|++...        +++.+++|+............+|..+++.|. +.-..++++++.+   .+|+||++
T Consensus        57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~---g~v~e~i~  133 (379)
T 3feg_A           57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE---GRLEQYIP  133 (379)
T ss_dssp             EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT---EEEEECCS
T ss_pred             EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC---ccEEEEec
Confidence            5767888999999864        2467889986433334456678999998884 3333566666654   38999998


Q ss_pred             CCCHHHh--------------h---cCC---CCCCCC--HHHHHHHHHHHHHH-------------------Hhhhh---
Q 021659          116 NGSLKEH--------------L---NDP---LKTPLD--WKTRLQIAIGVAAA-------------------LEYLL---  151 (309)
Q Consensus       116 ~~sL~~~--------------i---~~~---~~~~l~--~~~~~~i~~~i~~~-------------------l~~lh---  151 (309)
                      |.+|..-              +   ...   ......  +.++.++..++...                   +..|.   
T Consensus       134 G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~L  213 (379)
T 3feg_A          134 SRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKLL  213 (379)
T ss_dssp             EEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHHHH
T ss_pred             CccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHHHH
Confidence            7554310              0   111   011222  34555555444221                   22221   


Q ss_pred             --hcCCCCeeecccCCCceeeCCC----CceeEecccccc
Q 021659          152 --LFSNLPMYYVSISSSSIMLDEN----FTAKLSDVGFFN  185 (309)
Q Consensus       152 --~~h~~~i~H~dl~p~nill~~~----~~~kl~dfg~~~  185 (309)
                        ......++|+|+.+.||+++.+    +.+.++||..+.
T Consensus       214 ~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          214 ESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             HTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred             hhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence              1135679999999999999876    689999998764

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=97.48  E-value=0.00019  Score=62.11  Aligned_cols=70  Identities=7%  Similarity=-0.096  Sum_probs=41.7

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCc-ceEeeeEeCCeeEEEEeeC-CCCCH
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHL-LALQGFSTGRKRLLVFDNI-ENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~ni-v~~~~~~~~~~~~lv~e~~-~~~sL  119 (309)
                      +.++.|..+.+|+.     +.+++|+........-....|+..++.+....+ .+++++.. ...++++||+ ++.++
T Consensus        24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~~~-~~~~~v~e~i~~g~~l   95 (301)
T 3dxq_A           24 LERLGGLTNLVFRA-----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHVDP-ATGVMVTRYIAGAQTM   95 (301)
T ss_dssp             EEEESCSSEEEEEE-----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEECT-TTCCEEEECCTTCEEC
T ss_pred             eEcCCcccccccee-----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEEEC-CCCEEEEeecCCCccC
Confidence            56788989999998     457788764322111123467777777742222 45555433 3457899999 66444

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=97.32  E-value=0.0038  Score=54.34  Aligned_cols=138  Identities=13%  Similarity=0.076  Sum_probs=78.8

Q ss_pred             ccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCC--CcceEeee------EeCCeeEEEEeeCCC
Q 021659           45 IVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHR--HLLALQGF------STGRKRLLVFDNIEN  116 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~--niv~~~~~------~~~~~~~lv~e~~~~  116 (309)
                      .++ |..+.||+....+|+.+++|.........+.+..|...++.|...  .++.++..      ..++..++++++++|
T Consensus        33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G  111 (328)
T 1zyl_A           33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG  111 (328)
T ss_dssp             EEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred             eec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCC
Confidence            355 778899998776676788998754333456777888888877421  23333332      123456789999987


Q ss_pred             CCHH-----Hh-------------hcCCC---CCCCCHHHH----------------------HHHHHHHHHHHhhhhh-
Q 021659          117 GSLK-----EH-------------LNDPL---KTPLDWKTR----------------------LQIAIGVAAALEYLLL-  152 (309)
Q Consensus       117 ~sL~-----~~-------------i~~~~---~~~l~~~~~----------------------~~i~~~i~~~l~~lh~-  152 (309)
                      .++.     ..             .....   ....+....                      ...+..++..+..+.. 
T Consensus       112 ~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  191 (328)
T 1zyl_A          112 RQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWRE  191 (328)
T ss_dssp             EECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCS
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            5432     10             01000   111222111                      1111222222222110 


Q ss_pred             cCCCCeeecccCCCceeeCCCCceeEecccccc
Q 021659          153 FSNLPMYYVSISSSSIMLDENFTAKLSDVGFFN  185 (309)
Q Consensus       153 ~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~  185 (309)
                      .....++|||+++.||+++ + .+.++||+.+.
T Consensus       192 ~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~  222 (328)
T 1zyl_A          192 DFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR  222 (328)
T ss_dssp             CSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred             cCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence            1356789999999999998 4 88999998654

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=97.30  E-value=0.0019  Score=56.58  Aligned_cols=139  Identities=12%  Similarity=0.070  Sum_probs=71.1

Q ss_pred             ccccCCCc-eEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCC-C-CCcceEeeeEeCCeeEEEEeeCCCCCHHH
Q 021659           45 IVYTNSHG-AAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLH-H-RHLLALQGFSTGRKRLLVFDNIENGSLKE  121 (309)
Q Consensus        45 ~lg~G~~~-~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~-h-~niv~~~~~~~~~~~~lv~e~~~~~sL~~  121 (309)
                      .+..|... .+|+....+++.+++|......  ...+..|+.+++.|. + -++.+++.+..+. .+++||++.+.++.+
T Consensus        25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~--~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~-g~ll~e~l~~~~l~~  101 (333)
T 3csv_A           25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEE--GGDTQPFVDLAQYLRNLDISAPEIYAEEHAR-GLLLIEDLGDALFTE  101 (333)
T ss_dssp             C--------CCEEEECTTCCEEEEEECCTTT--TCCSHHHHHHHHHHHHTTCBCCCEEEEETTT-TEEEECCCCSCBHHH
T ss_pred             ECCCCCCCceEEEEEcCCCCeEEEEECCCCC--CccccHHHHHHHHHHhCCCCCCceeeecCCC-CEEEEeeCCCcchHH
Confidence            34445443 3677765446667777553322  023455677776663 2 2345566654433 378999997766643


Q ss_pred             hhcC---------------------CC---CCCCCHHHHH-------H-HH------------HHHHHHHhhhh---hcC
Q 021659          122 HLND---------------------PL---KTPLDWKTRL-------Q-IA------------IGVAAALEYLL---LFS  154 (309)
Q Consensus       122 ~i~~---------------------~~---~~~l~~~~~~-------~-i~------------~~i~~~l~~lh---~~h  154 (309)
                      .+..                     ..   ...++.....       . +.            ..+...+..+.   ..+
T Consensus       102 ~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~~  181 (333)
T 3csv_A          102 VINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQLEG  181 (333)
T ss_dssp             HHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHCCS
T ss_pred             HhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcccC
Confidence            3321                     00   0112221110       0 00            01111112221   124


Q ss_pred             CCCeeecccCCCceeeCCC----CceeEeccccccc
Q 021659          155 NLPMYYVSISSSSIMLDEN----FTAKLSDVGFFNS  186 (309)
Q Consensus       155 ~~~i~H~dl~p~nill~~~----~~~kl~dfg~~~~  186 (309)
                      ...++|||+.+.||+++.+    +.+.++||+.+..
T Consensus       182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL  217 (333)
T ss_dssp             CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred             CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence            5689999999999999874    6789999987653

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=97.24  E-value=0.00061  Score=62.20  Aligned_cols=70  Identities=16%  Similarity=0.165  Sum_probs=47.4

Q ss_pred             ccccCCCceEEEEEEcC--------CcEEEEEEeccccccHHHHHHHHHHHccCCCCCc-ceEeeeEeCCeeEEEEeeCC
Q 021659           45 IVYTNSHGAAYKARFQD--------GEVALVKEIQALNLEKDAFYREIQLLGRLHHRHL-LALQGFSTGRKRLLVFDNIE  115 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~~--------~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~ni-v~~~~~~~~~~~~lv~e~~~  115 (309)
                      .|+.|..+.+|++...+        ++.+++|+.... ...+.+..|..+++.|...++ .++++.+.+   .+|+||++
T Consensus        80 ~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~---g~v~e~l~  155 (429)
T 1nw1_A           80 RIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIFSG---GRLEEYIP  155 (429)
T ss_dssp             EECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT---EEEECCCC
T ss_pred             EeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC---CEEEEEeC
Confidence            57788889999998753        467889977332 122556689999988853333 566665543   37899998


Q ss_pred             CCC
Q 021659          116 NGS  118 (309)
Q Consensus       116 ~~s  118 (309)
                      |.+
T Consensus       156 G~~  158 (429)
T 1nw1_A          156 SRP  158 (429)
T ss_dssp             EEE
T ss_pred             Ccc
Confidence            643

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=97.15  E-value=0.0015  Score=56.88  Aligned_cols=139  Identities=10%  Similarity=0.058  Sum_probs=74.5

Q ss_pred             ccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCC--cceEeee-------EeCCeeEEEEeeCC
Q 021659           45 IVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRH--LLALQGF-------STGRKRLLVFDNIE  115 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~n--iv~~~~~-------~~~~~~~lv~e~~~  115 (309)
                      .++.|..+.+|+....++ .+++|..... ...+.+..|+.+++.|....  +..++..       ...+..++++++++
T Consensus        29 ~i~~G~~n~~~~v~~~~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l~  106 (322)
T 2ppq_A           29 GIAEGVENSNFLLHTTKD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFLE  106 (322)
T ss_dssp             EECC---EEEEEEEESSC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECCC
T ss_pred             ccCCCcccceEEEEeCCc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeCC
Confidence            466788889999987655 5678877542 12335667788877763211  2333321       12356688999998


Q ss_pred             CCCHHH------------------hhcCCCCC---CCC---HHHHHH------------HHHHHHHHHhhhhh----cCC
Q 021659          116 NGSLKE------------------HLNDPLKT---PLD---WKTRLQ------------IAIGVAAALEYLLL----FSN  155 (309)
Q Consensus       116 ~~sL~~------------------~i~~~~~~---~l~---~~~~~~------------i~~~i~~~l~~lh~----~h~  155 (309)
                      |.++..                  ....-...   ...   |.....            +...+...+..+..    ...
T Consensus       107 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~~  186 (322)
T 2ppq_A          107 GMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDLP  186 (322)
T ss_dssp             CBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSSC
T ss_pred             CcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcccCC
Confidence            864321                  00110000   011   211100            00112233333321    124


Q ss_pred             CCeeecccCCCceeeCCCCceeEecccccc
Q 021659          156 LPMYYVSISSSSIMLDENFTAKLSDVGFFN  185 (309)
Q Consensus       156 ~~i~H~dl~p~nill~~~~~~kl~dfg~~~  185 (309)
                      .+++|||+++.||+++.++.+.++||+.+.
T Consensus       187 ~~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          187 AGVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cccCCCCCCccCEEEeCCceEEEecchhcc
Confidence            689999999999999877656899998654

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=97.10  E-value=0.0012  Score=58.90  Aligned_cols=73  Identities=7%  Similarity=-0.001  Sum_probs=42.3

Q ss_pred             cccccCCCceEEEEEEcC---------CcEEEEEEeccccccHHHHHHHHHHHccCCCCC-cceEeeeEeCCeeEEEEee
Q 021659           44 RIVYTNSHGAAYKARFQD---------GEVALVKEIQALNLEKDAFYREIQLLGRLHHRH-LLALQGFSTGRKRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~---------~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~n-iv~~~~~~~~~~~~lv~e~  113 (309)
                      +.++.|....+|+....+         ++.+++|+.............|.++++.|...+ ..++++...   .++|++|
T Consensus        39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~~---~~~v~e~  115 (369)
T 3c5i_A           39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTFN---GGRIEEW  115 (369)
T ss_dssp             EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEET---TEEEEEC
T ss_pred             EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEecC---CcEEEEE
Confidence            357778889999998653         267888876432211112357888888774223 345555432   3689999


Q ss_pred             CCCCCH
Q 021659          114 IENGSL  119 (309)
Q Consensus       114 ~~~~sL  119 (309)
                      ++|.++
T Consensus       116 i~G~~l  121 (369)
T 3c5i_A          116 LYGDPL  121 (369)
T ss_dssp             CCSEEC
T ss_pred             ecCCcC
Confidence            987543

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=97.02  E-value=0.0028  Score=58.23  Aligned_cols=73  Identities=14%  Similarity=0.024  Sum_probs=45.3

Q ss_pred             cccccCCCceEEEEEEcC-CcEEEEEEeccccccHHHHHHHHHHHccCCCCCc-ceEeeeEeCCeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARFQD-GEVALVKEIQALNLEKDAFYREIQLLGRLHHRHL-LALQGFSTGRKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~-~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~ni-v~~~~~~~~~~~~lv~e~~~~~sL  119 (309)
                      +.|+.|-.+.+|++...+ +..+++|+........-.-..|..+++.|...++ .++++++.+   .+|+||++|.+|
T Consensus       114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~~---G~v~e~I~G~~l  188 (458)
T 2qg7_A          114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFTN---GRIEEFMDGYAL  188 (458)
T ss_dssp             EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEETT---EEEEECCCSEEC
T ss_pred             EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeCC---eEEEEeeCCccC
Confidence            357788889999998765 4678888764322111012478888888864444 456665532   359999987544

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=96.93  E-value=0.0044  Score=54.52  Aligned_cols=31  Identities=6%  Similarity=0.028  Sum_probs=27.1

Q ss_pred             CCCeeecccCCCceeeCCCCceeEecccccc
Q 021659          155 NLPMYYVSISSSSIMLDENFTAKLSDVGFFN  185 (309)
Q Consensus       155 ~~~i~H~dl~p~nill~~~~~~kl~dfg~~~  185 (309)
                      ...++|||+.+.||+++.++.+.++||+.+.
T Consensus       205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~  235 (339)
T 3i1a_A          205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPM  235 (339)
T ss_dssp             GCEEECSCCCGGGEEECGGGCEEECCCSSCE
T ss_pred             CceeEeCCCCcCCEEEeCCCeEEEEECCCCe
Confidence            4679999999999999887889999997654

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=96.60  E-value=0.0054  Score=50.11  Aligned_cols=103  Identities=17%  Similarity=0.053  Sum_probs=65.1

Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccccCCCCCC
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYATMPHS  196 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~  196 (309)
                      -||.+.+... +.++++.++|.++.|.+.+|.-+-.. ... ...=+.|..|++..+|.|.+.+ +.+     ......+
T Consensus        33 vSL~eIL~~~-~~PlsEEqaWALc~Qc~~~L~~~~~~-~~~-~~~i~~~~~i~l~~dG~V~f~~-~~s-----~~~~~~~  103 (229)
T 2yle_A           33 LSLEEILRLY-NQPINEEQAWAVCYQCCGSLRAAARR-RQP-RHRVRSAAQIRVWRDGAVTLAP-AAD-----DAGEPPP  103 (229)
T ss_dssp             EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHT-TCC-CCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred             ccHHHHHHHc-CCCcCHHHHHHHHHHHHHHHHhhhhc-ccC-CceecCCcceEEecCCceeccc-ccc-----cccccCC
Confidence            3788888643 68999999999999999998765110 011 1223457889999999887653 111     1123345


Q ss_pred             CCCCCCC-CCCCCCcEeehhhHHHHHHhCCCCC
Q 021659          197 SCPEDCS-TQDCSNIIFQLGVLILELVTGQSPE  228 (309)
Q Consensus       197 ~~PE~~~-~~~~~~Dv~slG~~l~~l~tg~~p~  228 (309)
                      .+||... ..+.+.=|||||+++|..+--..|-
T Consensus       104 ~~pe~~~~~~te~~~IysLG~tLY~ALDygL~e  136 (229)
T 2yle_A          104 VAGKLGYSQCMETEVIESLGIIIYKALDYGLKE  136 (229)
T ss_dssp             ---CCSSSSSCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred             CChhhccccchHHHHHHHHHHHHHHHhhcCCCc
Confidence            6777653 2346677999999999998766653

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=95.84  E-value=0.027  Score=51.08  Aligned_cols=72  Identities=7%  Similarity=-0.052  Sum_probs=45.2

Q ss_pred             ccccCCCceEEEEEEcC--------CcEEEEEEeccccccHHHHHHHHHHHccCC-CCCcceEeeeEeCCeeEEEEeeCC
Q 021659           45 IVYTNSHGAAYKARFQD--------GEVALVKEIQALNLEKDAFYREIQLLGRLH-HRHLLALQGFSTGRKRLLVFDNIE  115 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~~--------~~~va~K~~~~~~~~~~~~~~ei~~l~~l~-h~niv~~~~~~~~~~~~lv~e~~~  115 (309)
                      .+..|-.+.+|+....+        ++.+++|+........-.-.+|..+++.|. +.-..++++.+.   .++|++|++
T Consensus        77 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~~---~~~I~efI~  153 (424)
T 3mes_A           77 QIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADFP---EGRIEEFID  153 (424)
T ss_dssp             EECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEET---TEEEEECCC
T ss_pred             EcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEcC---CCEEEEEeC
Confidence            56778889999998753        577888886432211112346788887774 322345555332   368999999


Q ss_pred             CCCH
Q 021659          116 NGSL  119 (309)
Q Consensus       116 ~~sL  119 (309)
                      |.+|
T Consensus       154 G~~l  157 (424)
T 3mes_A          154 GEPL  157 (424)
T ss_dssp             SEEC
T ss_pred             CccC
Confidence            8653

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=80.08  E-value=0.18  Score=46.21  Aligned_cols=59  Identities=8%  Similarity=-0.042  Sum_probs=16.9

Q ss_pred             ccccccccCCCceEEEEEEcC-CcEEEE------EEecccccc---HHHHHHHHHHHccCCCCCcceEeeeE
Q 021659           41 GFHRIVYTNSHGAAYKARFQD-GEVALV------KEIQALNLE---KDAFYREIQLLGRLHHRHLLALQGFS  102 (309)
Q Consensus        41 ~~~~~lg~G~~~~v~~~~~~~-~~~va~------K~~~~~~~~---~~~~~~ei~~l~~l~h~niv~~~~~~  102 (309)
                      .+.+.+|   ||.||+|.+.. ...||+      |........   ...+.+|..+.+.++|||+++.++|.
T Consensus       145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~  213 (463)
T 3cxl_A          145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK  213 (463)
T ss_dssp             CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred             cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence            3445676   99999999854 356777      655432222   23577888888899999999988864

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=80.02  E-value=0.9  Score=40.58  Aligned_cols=30  Identities=17%  Similarity=0.200  Sum_probs=24.7

Q ss_pred             CCeeecccCCCceee------CCCCceeEecccccc
Q 021659          156 LPMYYVSISSSSIML------DENFTAKLSDVGFFN  185 (309)
Q Consensus       156 ~~i~H~dl~p~nill------~~~~~~kl~dfg~~~  185 (309)
                      ..++|+|+.+.||++      +.+..+.++||..+.
T Consensus       244 ~vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~  279 (401)
T 3g15_A          244 VVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EEEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred             eeeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence            346799999999999      456779999998764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	309
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-30
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	4e-30
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-28
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	4e-27
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-26
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-25
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	4e-25
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	3e-24
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	4e-24
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	9e-24
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-23
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-23
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-22
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	3e-21
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	3e-21
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	7e-21
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-20
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	3e-20
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	4e-20
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	5e-20
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	9e-20
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	9e-20
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-19
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	4e-19
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	5e-19
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	8e-19
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-18
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-18
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	5e-18
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	8e-18
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	8e-18
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-17
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-17
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-17
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	5e-17
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-16
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	3e-16
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-16
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	5e-16
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-15
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	3e-15
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-14
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-14
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	4e-14
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	5e-14
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-13
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	4e-13
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	9e-13
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-12
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-12
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	7e-12
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	3e-11
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	5e-11
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-10
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	3e-10
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-09
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	5e-09
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	1e-08
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	5e-08
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-07
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-07

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (285), Expect = 2e-30
 Identities = 58/259 (22%), Positives = 103/259 (39%), Gaps = 25/259 (9%)

Query: 50  SHGAAYKARFQDG-EVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRL 108
           S G  YK ++     V ++        +  AF  E+ +L +  H ++L   G+ST  +  
Sbjct: 20  SFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLA 79

Query: 109 LVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSI 168
           +V    E  SL  HL+   +T  +    + IA   A  ++YL       + +  + S++I
Sbjct: 80  IVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYL---HAKSIIHRDLKSNNI 135

Query: 169 MLDENFTAKLSDVGFFNSVRNYATM---------PHSSCPEDCSTQDCSNI-----IFQL 214
            L E+ T K+ D G       ++                PE    QD +       ++  
Sbjct: 136 FLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 195

Query: 215 GVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLC 274
           G+++ EL+TGQ P     +  Q I    +    +   D     S   K +K+L+A   L 
Sbjct: 196 GIVLYELMTGQLPYSNINNRDQIIF---MVGRGYLSPDLSKVRSNCPKAMKRLMAEC-LK 251

Query: 275 IKTKDKPTISIPQISRYLQ 293
            K  ++P     QI   ++
Sbjct: 252 KKRDERPLFP--QILASIE 268

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (282), Expect = 4e-30
 Identities = 52/260 (20%), Positives = 108/260 (41%), Gaps = 33/260 (12%)

Query: 50  SHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLL 109
             G  +   +       VK ++  ++  DAF  E  L+ +L H+ L+ L    T     +
Sbjct: 25  QFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYI 84

Query: 110 VFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIM 169
           + + +ENGSL + L  P    L     L +A  +A  + ++         +  + +++I+
Sbjct: 85  ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI---EERNYIHRDLRAANIL 141

Query: 170 LDENFTAKLSDVGFFNSVRNYATMPHSSC--------PEDCSTQDCS--NIIFQLGVLIL 219
           + +  + K++D G    + +                 PE  +    +  + ++  G+L+ 
Sbjct: 142 VSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLT 201

Query: 220 ELVTGQSP---EEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIK 276
           E+VT          + ++IQ ++        +RM+ PD       +EL +L+   RLC K
Sbjct: 202 EIVTHGRIPYPGMTNPEVIQNLERG------YRMVRPD----NCPEELYQLM---RLCWK 248

Query: 277 T--KDKPTISIPQISRYLQN 294
              +D+PT     +   L++
Sbjct: 249 ERPEDRPTFD--YLRSVLED 266

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  108 bits (270), Expect = 3e-28
 Identities = 42/257 (16%), Positives = 102/257 (39%), Gaps = 25/257 (9%)

Query: 50  SHGAAYKARFQD-GEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQG-FSTGRKR 107
            +G  Y+  ++       VK ++   +E + F +E  ++  + H +L+ L G  +     
Sbjct: 29  QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 88

Query: 108 LLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSS 167
            ++ + +  G+L ++L +  +  +     L +A  +++A+EYL         +  +++ +
Sbjct: 89  YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIHRDLAARN 145

Query: 168 IMLDENFTAKLSDVGFFNSVRNYATMPHSSC--------PEDCSTQ--DCSNIIFQLGVL 217
            ++ EN   K++D G    +       H+          PE  +       + ++  GVL
Sbjct: 146 CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 205

Query: 218 ILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKT 277
           + E+ T        +DL Q          ++ +++ D          +K+  + R C + 
Sbjct: 206 LWEIATYGMSPYPGIDLSQ----------VYELLEKDYRMERPEGCPEKVYELMRACWQW 255

Query: 278 KDKPTISIPQISRYLQN 294
                 S  +I +  + 
Sbjct: 256 NPSDRPSFAEIHQAFET 272

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (261), Expect = 4e-27
 Identities = 48/260 (18%), Positives = 103/260 (39%), Gaps = 35/260 (13%)

Query: 50  SHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQG-FSTGRKRL 108
             G  +   + + +   +K I+   + ++ F  E +++ +L H  L+ L G         
Sbjct: 17  QFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPIC 76

Query: 109 LVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSI 168
           LVF+ +E+G L ++L    +     +T L + + V   + YL       + +  +++ + 
Sbjct: 77  LVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYL---EEACVIHRDLAARNC 132

Query: 169 MLDENFTAKLSDVGFFNSVRNYATMPHSSC--------PEDCSTQ--DCSNIIFQLGVLI 218
           ++ EN   K+SD G    V +      +          PE  S       + ++  GVL+
Sbjct: 133 LVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM 192

Query: 219 LELVTGQSP---EEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCI 275
            E+ +          + ++++ I          R+  P L     S  + +++     C 
Sbjct: 193 WEVFSEGKIPYENRSNSEVVEDISTG------FRLYKPRL----ASTHVYQIM---NHCW 239

Query: 276 KT--KDKPTISIPQISRYLQ 293
           K   +D+P  S  ++ R L 
Sbjct: 240 KERPEDRPAFS--RLLRQLA 257

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (254), Expect = 3e-26
 Identities = 42/253 (16%), Positives = 96/253 (37%), Gaps = 23/253 (9%)

Query: 50  SHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFST--GRKR 107
             G      ++  +VA VK I+  +    AF  E  ++ +L H +L+ L G         
Sbjct: 19  EFGDVMLGDYRGNKVA-VKCIK-NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL 76

Query: 108 LLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSS 167
            +V + +  GSL ++L    ++ L     L+ ++ V  A+EYL         +  +++ +
Sbjct: 77  YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL---EGNNFVHRDLAARN 133

Query: 168 IMLDENFTAKLSDVGFFNSVRNYATMPHSSC----PEDCSTQ--DCSNIIFQLGVLILEL 221
           +++ E+  AK+SD G      +             PE    +     + ++  G+L+ E+
Sbjct: 134 VLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 193

Query: 222 VTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKP 281
            +        + L   +        + +    D         + +++      +    +P
Sbjct: 194 YSFGRVPYPRIPLKDVVP------RVEKGYKMDAPDGC-PPAVYEVMKNC-WHLDAAMRP 245

Query: 282 TISIPQISRYLQN 294
           +    Q+   L++
Sbjct: 246 SFL--QLREQLEH 256

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (252), Expect = 1e-25
 Identities = 37/257 (14%), Positives = 93/257 (36%), Gaps = 27/257 (10%)

Query: 50  SHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLL 109
             G  +   +       +K ++   +  +AF +E Q++ +L H  L+ L    +     +
Sbjct: 29  CFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI 88

Query: 110 VFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIM 169
           V + +  GSL + L       L     + +A  +A+ + Y+     +   +  + +++I+
Sbjct: 89  VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANIL 145

Query: 170 LDENFTAKLSDVGFFNSVRNYATMPHSSC--------PEDCSTQ--DCSNIIFQLGVLIL 219
           + EN   K++D G    + +                 PE          + ++  G+L+ 
Sbjct: 146 VGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLT 205

Query: 220 ELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKT-- 277
           EL T        +   +          +   ++         +  + L  +   C +   
Sbjct: 206 ELTTKGRVPYPGMVNRE----------VLDQVERGYRMPCPPECPESLHDLMCQCWRKEP 255

Query: 278 KDKPTISIPQISRYLQN 294
           +++PT     +  +L++
Sbjct: 256 EERPTFE--YLQAFLED 270

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =   99 bits (248), Expect = 4e-25
 Identities = 47/284 (16%), Positives = 97/284 (34%), Gaps = 43/284 (15%)

Query: 50  SHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGF-----STG 104
             G  ++ +++  EVA VK   +          EI     L H ++L           T 
Sbjct: 15  RFGEVWRGKWRGEEVA-VKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 73

Query: 105 RKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLF-----SNLPMY 159
            +  LV D  E+GSL ++LN   +  +  +  +++A+  A+ L +L +          + 
Sbjct: 74  TQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 130

Query: 160 YVSISSSSIMLDENFTAKLSDVGFFNSVRNYATM-----------PHSSCPEDCSTQDCS 208
           +  + S +I++ +N T  ++D+G      +                    PE        
Sbjct: 131 HRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINM 190

Query: 209 NI--------IFQLGVLILELVTGQSPEEGDVD---------LIQWIQESSISSSIHRMI 251
                     I+ +G++  E+    S      D               E        + +
Sbjct: 191 KHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKL 250

Query: 252 DPDLGGSYDSKE-LKKLLAVARLCIKTKDKPTISIPQISRYLQN 294
            P++   + S E L+ +  + R C        ++  +I + L  
Sbjct: 251 RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 97.9 bits (243), Expect = 3e-24
 Identities = 49/305 (16%), Positives = 112/305 (36%), Gaps = 52/305 (17%)

Query: 24  KCFIRRFSYKDIKMATDGFHRIVYTN-----------SHGAAYKARF----QDGEVALVK 68
           K FI  F+++D   A   F + +  +             G           +      +K
Sbjct: 1   KIFIDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIK 60

Query: 69  EIQALNLEKDA--FYREIQLLGRLHHRHLLALQG-FSTGRKRLLVFDNIENGSLKEHLND 125
            +++   EK    F  E  ++G+  H +++ L+G  +     +++ + +ENGSL   L  
Sbjct: 61  TLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ 120

Query: 126 PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFN 185
                      + +  G+AA ++YL   +++   +  +++ +I+++ N   K+SD G   
Sbjct: 121 NDG-QFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSR 176

Query: 186 SVRNYATMPHSS------------CPEDCSTQDCSNI--IFQLGVLILELVT-GQSPEEG 230
            + +  + P  +             PE    +  ++   ++  G+++ E+++ G+ P   
Sbjct: 177 FLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD 236

Query: 231 DVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKT--KDKPTISIPQI 288
             +             +   I+ D            L  +   C +     +P     QI
Sbjct: 237 MTN-----------QDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFG--QI 283

Query: 289 SRYLQ 293
              L 
Sbjct: 284 VNTLD 288

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 97.4 bits (242), Expect = 4e-24
 Identities = 48/249 (19%), Positives = 89/249 (35%), Gaps = 27/249 (10%)

Query: 50  SHGAAYKAR-FQDGEVALVKEIQALNLEKDA----FYREIQLLGRLHHRHLLALQG-FST 103
           S GA Y AR  ++ EV  +K++     + +       +E++ L +L H + +  +G +  
Sbjct: 27  SFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR 86

Query: 104 GRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSI 163
                LV +     +         K PL       +  G    L YL    +  M +  +
Sbjct: 87  EHTAWLVMEYCLGSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYL---HSHNMIHRDV 141

Query: 164 SSSSIMLDENFTAKLSDVGFFNSVRNYATM---PHSSCPEDCSTQDCSNI-----IFQLG 215
            + +I+L E    KL D G  + +    +    P+   PE     D         ++ LG
Sbjct: 142 KAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 201

Query: 216 VLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCI 275
           +  +EL   + P      +            I +   P L   + S+  +  +    L  
Sbjct: 202 ITCIELAERKPPLFNMNAMSALYH-------IAQNESPALQSGHWSEYFRNFVDSC-LQK 253

Query: 276 KTKDKPTIS 284
             +D+PT  
Sbjct: 254 IPQDRPTSE 262

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.5 bits (237), Expect = 9e-24
 Identities = 45/249 (18%), Positives = 93/249 (37%), Gaps = 29/249 (11%)

Query: 50  SHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQG-FSTGRKRL 108
             G     +++      +K I+  ++ +D F  E +++  L H  L+ L G  +  R   
Sbjct: 16  QFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIF 75

Query: 109 LVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSI 168
           ++ + + NG L  +L +  +     +  L++   V  A+EYL    +    +  +++ + 
Sbjct: 76  IITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLAARNC 131

Query: 169 MLDENFTAKLSDVGFFNSVRNYATMPHSSC--------PEDCSTQDCSNI--IFQLGVLI 218
           ++++    K+SD G    V +                 PE       S+   I+  GVL+
Sbjct: 132 LVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM 191

Query: 219 LELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKT 277
            E+ + G+ P E   +           S     I   L         +K+  +   C   
Sbjct: 192 WEIYSLGKMPYERFTN-----------SETAEHIAQGLRLYRPHLASEKVYTIMYSCWHE 240

Query: 278 --KDKPTIS 284
              ++PT  
Sbjct: 241 KADERPTFK 249

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.1 bits (236), Expect = 2e-23
 Identities = 53/257 (20%), Positives = 97/257 (37%), Gaps = 33/257 (12%)

Query: 50  SHGAAYKARF-QDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGF---S 102
           S+G   K R   DG++ + KE+   ++   EK     E+ LL  L H +++         
Sbjct: 16  SYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR 75

Query: 103 TGRKRLLVFDNIENGSLKEHLNDPLKT--PLDWKTRLQIAIGVAAALEYLLLFSNLPMYY 160
           T     +V +  E G L   +    K    LD +  L++   +  AL+     S+     
Sbjct: 76  TNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTV 135

Query: 161 V--SISSSSIMLDENFTAKLSDVGFFNSVRNYATM-------PHSSCPEDCSTQ--DCSN 209
           +   +  +++ LD     KL D G    + +  +        P+   PE  +    +  +
Sbjct: 136 LHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKS 195

Query: 210 IIFQLGVLILELVTGQSPEEGD--VDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL 267
            I+ LG L+ EL     P       +L   I+E       +R           S EL ++
Sbjct: 196 DIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRY----------SDELNEI 245

Query: 268 LAVARLCIKTKDKPTIS 284
           +    L +K   +P++ 
Sbjct: 246 ITRM-LNLKDYHRPSVE 261

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.9 bits (238), Expect = 2e-23
 Identities = 42/254 (16%), Positives = 94/254 (37%), Gaps = 20/254 (7%)

Query: 50  SHGAAYKARF-QDGEVALVKEI--QALNLEKDAFYREIQLLGRLHHRHLLALQG-FSTGR 105
           + G  +K      G V   K I  +     ++   RE+Q+L   +  +++   G F +  
Sbjct: 18  NGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG 77

Query: 106 KRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISS 165
           +  +  ++++ GSL + L       +  +   +++I V   L Y  L     + +  +  
Sbjct: 78  EISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTY--LREKHKIMHRDVKP 133

Query: 166 SSIMLDENFTAKLSDVGFFNSVRNYATMPHSSC-----PEDCSTQ--DCSNIIFQLGVLI 218
           S+I+++     KL D G    + +              PE          + I+ +G+ +
Sbjct: 134 SNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 193

Query: 219 LELVTGQSP-----EEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARL 273
           +E+  G+ P      +    +     E   + +  R   P    S    + +  +A+  L
Sbjct: 194 VEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFEL 253

Query: 274 CIKTKDKPTISIPQ 287
                ++P   +P 
Sbjct: 254 LDYIVNEPPPKLPS 267

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.9 bits (230), Expect = 1e-22
 Identities = 49/268 (18%), Positives = 104/268 (38%), Gaps = 43/268 (16%)

Query: 50  SHGAAYKARFQDGEVALVKEIQALNLE------KDAFYREIQLLGRLHHRHLLALQGFST 103
           + G   K  +Q  +V     ++ L  E      KD    E  ++ +L + +++ + G   
Sbjct: 19  NFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE 78

Query: 104 GRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSI 163
               +LV +  E G L ++L       +  K  +++   V+  ++YL         +  +
Sbjct: 79  AESWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYL---EESNFVHRDL 133

Query: 164 SSSSIMLDENFTAKLSDVGFFNSVRNYATMPHSSC----------PEDCSTQDCSNI--I 211
           ++ +++L     AK+SD G   ++R       +            PE  +    S+   +
Sbjct: 134 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDV 193

Query: 212 FQLGVLILELVT-GQSPEEG--DVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL 268
           +  GVL+ E  + GQ P  G    ++   +++        RM  P        +E+  L+
Sbjct: 194 WSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG------ERMGCPA----GCPREMYDLM 243

Query: 269 AVARLCIKT--KDKPTISIPQISRYLQN 294
               LC     +++P  +   +   L+N
Sbjct: 244 ---NLCWTYDVENRPGFA--AVELRLRN 266

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.3 bits (221), Expect = 3e-21
 Identities = 44/254 (17%), Positives = 91/254 (35%), Gaps = 32/254 (12%)

Query: 50  SHGAAYKARF-QDGEVALVKEIQALNLEK-DAFYREIQLLGRLHHRHLLALQG-FSTGRK 106
           + G  YKA+  +   +A  K I   + E+ + +  EI +L    H +++ L   F     
Sbjct: 24  AFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENN 83

Query: 107 RLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSS 166
             ++ +    G++   + + L+ PL       +      AL YL    +  + +  + + 
Sbjct: 84  LWILIEFCAGGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYL---HDNKIIHRDLKAG 139

Query: 167 SIMLDENFTAKLSDVGF-------FNSVRNYATMPHSSCPEDCSTQDCSNI-------IF 212
           +I+   +   KL+D G             ++   P+   PE    +   +        ++
Sbjct: 140 NILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVW 199

Query: 213 QLGVLILELVTGQSP--EEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV 270
            LG+ ++E+   + P  E   + ++  I      S    +  P       S   K  L  
Sbjct: 200 SLGITLIEMAEIEPPHHELNPMRVLLKI----AKSEPPTLAQPS----RWSSNFKDFLKK 251

Query: 271 ARLCIKTKDKPTIS 284
             L      + T S
Sbjct: 252 C-LEKNVDARWTTS 264

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.5 bits (219), Expect = 3e-21
 Identities = 45/241 (18%), Positives = 88/241 (36%), Gaps = 23/241 (9%)

Query: 28  RRFSYKDIKMATDGFHRIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDA----FYR 82
           R+++ +D +       R +     G  Y AR  Q   +  +K +    LEK        R
Sbjct: 1   RQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 55

Query: 83  EIQLLGRLHHRHLLALQG-FSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAI 141
           E+++   L H ++L L G F    +  L+ +    G++   L     +  D +       
Sbjct: 56  EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYIT 113

Query: 142 GVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYATM-----PHS 196
            +A AL Y     +  + +  I   +++L      K++D G+     +            
Sbjct: 114 ELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDY 170

Query: 197 SCPEDCSTQ--DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPD 254
             PE    +  D    ++ LGVL  E + G+ P E +     + + S +  +    +   
Sbjct: 171 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 230

Query: 255 L 255
            
Sbjct: 231 A 231

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.0 bits (217), Expect = 7e-21
 Identities = 43/267 (16%), Positives = 105/267 (39%), Gaps = 40/267 (14%)

Query: 50  SHGAAYKARFQDG------EVALVKEIQALNLEKD--AFYREIQLLGRLHHRHLLALQG- 100
             G  YK   +         VA +K ++A   EK    F  E  ++G+  H +++ L+G 
Sbjct: 19  EFGEVYKGMLKTSSGKKEVPVA-IKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGV 77

Query: 101 FSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYY 160
            S  +  +++ + +ENG+L + L +           + +  G+AA ++Y    +N+   +
Sbjct: 78  ISKYKPMMIITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKY---LANMNYVH 133

Query: 161 VSISSSSIMLDENFTAKLSDVGFFNSVRNYATMPHSSC----------PEDCSTQDCSNI 210
             +++ +I+++ N   K+SD G    + +     +++           PE  S +  ++ 
Sbjct: 134 RDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSA 193

Query: 211 --IFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL 268
             ++  G+++ E++T       ++   +          + + I+              + 
Sbjct: 194 SDVWSFGIVMWEVMTYGERPYWELSNHE----------VMKAINDGFRLPTPMDCPSAIY 243

Query: 269 AVARLCIKT--KDKPTISIPQISRYLQ 293
            +   C +     +P  +   I   L 
Sbjct: 244 QLMMQCWQQERARRPKFA--DIVSILD 268

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.0 bits (215), Expect = 2e-20
 Identities = 39/247 (15%), Positives = 95/247 (38%), Gaps = 25/247 (10%)

Query: 50  SHGAAYKARF-QDGEVALVKEIQALNL-EKDAFYREIQLLGRLHHRHLLALQG-FSTGRK 106
           + G  Y A     G+   ++++      +K+    EI ++    + +++     +  G +
Sbjct: 32  ASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE 91

Query: 107 RLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSS 166
             +V + +  GSL + +    +T +D      +      ALE+L    +  + +  I S 
Sbjct: 92  LWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFL---HSNQVIHRDIKSD 145

Query: 167 SIMLDENFTAKLSDVGFFNSVRNYATMPHSSC-------PEDCSTQ--DCSNIIFQLGVL 217
           +I+L  + + KL+D GF   +    +   +         PE  + +       I+ LG++
Sbjct: 146 NILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM 205

Query: 218 ILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKT 277
            +E++ G+ P   +            ++    + +P+      S   +  L    L +  
Sbjct: 206 AIEMIEGEPPYLNENP--LRALYLIATNGTPELQNPE----KLSAIFRDFLNRC-LDMDV 258

Query: 278 KDKPTIS 284
           + + +  
Sbjct: 259 EKRGSAK 265

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.8 bits (214), Expect = 3e-20
 Identities = 40/284 (14%), Positives = 93/284 (32%), Gaps = 49/284 (17%)

Query: 50  SHGAAYKARF------QDGEVALVKEI--QALNLEKDAFYREIQLLGRL-HHRHLLALQG 100
           + G   +A               VK +   A   E++A   E+++L  L +H +++ L G
Sbjct: 35  AFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLG 94

Query: 101 -FSTGRKRLLVFDNIENGSLKEHLN----------------DPLKTPLDWKTRLQIAIGV 143
             + G   L++ +    G L   L                 +  +  LD +  L  +  V
Sbjct: 95  ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQV 154

Query: 144 AAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYATMPHSSCPE--- 200
           A  + +L   ++    +  +++ +I+L      K+ D G    ++N +            
Sbjct: 155 AKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPV 211

Query: 201 --------DCSTQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMID 252
                           + ++  G+ + EL +  S                + S  ++MI 
Sbjct: 212 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS---------PYPGMPVDSKFYKMIK 262

Query: 253 PDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEV 296
                        ++  + + C         +  QI + ++ ++
Sbjct: 263 EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.4 bits (213), Expect = 4e-20
 Identities = 48/276 (17%), Positives = 102/276 (36%), Gaps = 41/276 (14%)

Query: 42  FHRIVYTNSHGAAYKARFQDGE-----VALVKEIQALNLEKDA--FYREIQLLGRLHHRH 94
           F+ ++     G  Y     D +      A VK +  +    +   F  E  ++    H +
Sbjct: 31  FNEVIGRGHFGCVYHGTLLDNDGKKIHCA-VKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89

Query: 95  LLALQG--FSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLL 152
           +L+L G    +    L+V   +++G L+  + +        K  +   + VA  +++   
Sbjct: 90  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKF--- 145

Query: 153 FSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-----------YATMPHSSCPED 201
            ++    +  +++ + MLDE FT K++D G    + +                     E 
Sbjct: 146 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 205

Query: 202 CSTQDCSNI--IFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSY 259
             TQ  +    ++  GVL+ EL+T  +P   DV+               R++ P+    Y
Sbjct: 206 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY---LLQGRRLLQPE----Y 258

Query: 260 DSKELKKLLAVARLCIKT--KDKPTISIPQISRYLQ 293
               L ++      C     + +P+ S  ++   + 
Sbjct: 259 CPDPLYEV---MLKCWHPKAEMRPSFS--ELVSRIS 289

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.9 bits (212), Expect = 5e-20
 Identities = 50/295 (16%), Positives = 113/295 (38%), Gaps = 54/295 (18%)

Query: 24  KCFIRR--FSYKDIKMATDGFHRIVYTNSHGAAYKARFQDG----EVALVKEIQALNLEK 77
           K F++R      DI++    F         G+  +  ++      +VA +K ++    + 
Sbjct: 2   KLFLKRDNLLIADIELGCGNF---------GSVRQGVYRMRKKQIDVA-IKVLKQGTEKA 51

Query: 78  DA--FYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKT 135
           D     RE Q++ +L + +++ L G       +LV +    G L + L    +  +    
Sbjct: 52  DTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGK-REEIPVSN 110

Query: 136 RLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYATM-- 193
             ++   V+  ++YL         +  +++ +++L     AK+SD G   ++    +   
Sbjct: 111 VAELLHQVSMGMKYL---EEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 167

Query: 194 --------PHSSCPEDCSTQDCSNI--IFQLGVLILELVT-GQSPEEG--DVDLIQWIQE 240
                        PE  + +  S+   ++  GV + E ++ GQ P +     +++ +I++
Sbjct: 168 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 227

Query: 241 SSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKT--KDKPTISIPQISRYLQ 293
                   RM  P         EL  L+     C     +D+P      + + ++
Sbjct: 228 G------KRMECPP----ECPPELYALM---SDCWIYKWEDRPDFL--TVEQRMR 267

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 85.3 bits (210), Expect = 9e-20
 Identities = 55/292 (18%), Positives = 107/292 (36%), Gaps = 65/292 (22%)

Query: 50  SHGAAYKAR------FQDGEVALVKEI--QALNLEKDAFYREIQLLGRLHHRHLLALQGF 101
           + G  ++AR      ++   +  VK +  +A    +  F RE  L+    + +++ L G 
Sbjct: 25  AFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGV 84

Query: 102 -STGRKRLLVFDNIENGSLKEHLND----------------------PLKTPLDWKTRLQ 138
            + G+   L+F+ +  G L E L                        P   PL    +L 
Sbjct: 85  CAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLC 144

Query: 139 IAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---------N 189
           IA  VAA + YL   S     +  +++ + ++ EN   K++D G   ++          N
Sbjct: 145 IARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGN 201

Query: 190 YATMPHSSCPEDCSTQDCS--NIIFQLGVLILELVTGQSP---EEGDVDLIQWIQESSIS 244
            A       PE       +  + ++  GV++ E+ +            ++I ++++ +I 
Sbjct: 202 DAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNIL 261

Query: 245 SSIHRMIDPDLGGSYDSKELKKLLAVARLCIKT--KDKPTISIPQISRYLQN 294
                        +       +L  + RLC      D+P+     I R LQ 
Sbjct: 262 -------------ACPENCPLELYNLMRLCWSKLPADRPSFC--SIHRILQR 298

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 85.5 bits (211), Expect = 9e-20
 Identities = 41/247 (16%), Positives = 87/247 (35%), Gaps = 20/247 (8%)

Query: 50  SHGAAYKARF-QDGEVALVKEI--QALNLEKDAFYREIQLLGRLHHRHLLALQG-FSTGR 105
           +      A   +  ++  +K I  +AL  ++ +   EI +L ++ H +++AL   + +G 
Sbjct: 21  AFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGG 80

Query: 106 KRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISS 165
              L+   +  G L + + +  K     +   ++   V  A++YL     +       + 
Sbjct: 81  HLYLIMQLVSGGELFDRIVE--KGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENL 138

Query: 166 SSIMLDENFTAKLSDVGFFNSVRNYATM------PHSSCPEDCSTQDCSNI--IFQLGVL 217
               LDE+    +SD G        + +      P    PE  + +  S     + +GV+
Sbjct: 139 LYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 198

Query: 218 ILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKT 277
              L+ G  P   + D   + Q              D+     S   K  +    +    
Sbjct: 199 AYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI-----SDSAKDFIRHL-MEKDP 252

Query: 278 KDKPTIS 284
           + + T  
Sbjct: 253 EKRFTCE 259

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.7 bits (209), Expect = 1e-19
 Identities = 41/253 (16%), Positives = 90/253 (35%), Gaps = 30/253 (11%)

Query: 50  SHGAAYKARF-QDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGF---- 101
           S    YK    +        E+Q   L   E+  F  E ++L  L H +++         
Sbjct: 21  SFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST 80

Query: 102 -STGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYY 160
               +  +LV + + +G+LK +L       +  K        +   L++L      P+ +
Sbjct: 81  VKGKKCIVLVTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHT-RTPPIIH 137

Query: 161 VSISSSSIML-DENFTAKLSDVGFFNSVRNYATMPHSSC-------PEDCSTQ-DCSNII 211
             +   +I +     + K+ D+G   +    A+   +         PE    + D S  +
Sbjct: 138 RDLKCDNIFITGPTGSVKIGDLGL--ATLKRASFAKAVIGTPEFMAPEMYEEKYDESVDV 195

Query: 212 FQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVA 271
           +  G+ +LE+ T + P     +  Q  +       +   + P         E+K+++   
Sbjct: 196 YAFGMCMLEMATSEYPYSECQNAAQIYRR------VTSGVKPASFDKVAIPEVKEIIEGC 249

Query: 272 RLCIKTKDKPTIS 284
            +     ++ +I 
Sbjct: 250 -IRQNKDERYSIK 261

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 84.3 bits (208), Expect = 4e-19
 Identities = 40/248 (16%), Positives = 85/248 (34%), Gaps = 23/248 (9%)

Query: 50  SHGAAYKARF-QDGEVALVKEIQ-ALNLEKDAFYREIQLLGRLHHRHLLALQG-FSTGRK 106
           + G  ++      G V + K I     L+K     EI ++ +LHH  L+ L   F    +
Sbjct: 41  AFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYE 100

Query: 107 RLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSS 166
            +L+ + +  G L + +       +     +         L+++       + ++ I   
Sbjct: 101 MVLILEFLSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHM---HEHSIVHLDIKPE 156

Query: 167 SIMLDENFTAKLSDVGFFNSVR--------NYATMPHSSCPEDCSTQDCS--NIIFQLGV 216
           +IM +    + +  + F  + +                + PE    +       ++ +GV
Sbjct: 157 NIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGV 216

Query: 217 LILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIK 276
           L   L++G SP  G+ DL                    +     S E K  +    L  +
Sbjct: 217 LGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSV-----SPEAKDFIKNL-LQKE 270

Query: 277 TKDKPTIS 284
            + + T+ 
Sbjct: 271 PRKRLTVH 278

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 84.0 bits (207), Expect = 5e-19
 Identities = 43/248 (17%), Positives = 87/248 (35%), Gaps = 23/248 (9%)

Query: 50  SHGAAYKARF-QDGEVALVKEIQALNL-EKDAFYREIQLLGRLHHRHLLALQG-FSTGRK 106
           + G  ++      G     K +   +  +K+   +EIQ +  L H  L+ L   F    +
Sbjct: 38  AFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNE 97

Query: 107 RLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSS 166
            +++++ +  G L E + D     +     ++    V   L ++         ++ +   
Sbjct: 98  MVMIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHM---HENNYVHLDLKPE 153

Query: 167 SIML--DENFTAKLSDVGF------FNSVRNYATMPHSSCPE--DCSTQDCSNIIFQLGV 216
           +IM     +   KL D G         SV+        + PE  +         ++ +GV
Sbjct: 154 NIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGV 213

Query: 217 LILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIK 276
           L   L++G SP  G+ D        S   ++       +     S++ K  +    L   
Sbjct: 214 LSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGI-----SEDGKDFIRKL-LLAD 267

Query: 277 TKDKPTIS 284
              + TI 
Sbjct: 268 PNTRMTIH 275

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 82.4 bits (203), Expect = 8e-19
 Identities = 46/262 (17%), Positives = 91/262 (34%), Gaps = 38/262 (14%)

Query: 50  SHGAAYKARF-QDGEVALVKEI----------QALNLEKDAFYREIQLLGRL--HHRHLL 96
                 +       +   VK I          + +   ++A  +E+ +L ++  H   + 
Sbjct: 15  VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQ 74

Query: 97  ALQGFSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNL 156
               + T     LVFD ++ G L ++L +  K  L  K   +I   +   +  L     L
Sbjct: 75  LKDTYETNTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICAL---HKL 129

Query: 157 PMYYVSISSSSIMLDENFTAKLSDVGFFNSV------RNYATMPHSSCPEDCSTQDCSNI 210
            + +  +   +I+LD++   KL+D GF   +      R     P    PE        N 
Sbjct: 130 NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNH 189

Query: 211 --------IFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSK 262
                   ++  GV++  L+ G  P      ++      S +         D      S 
Sbjct: 190 PGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDY-----SD 244

Query: 263 ELKKLLAVARLCIKTKDKPTIS 284
            +K L++   L ++ + + T  
Sbjct: 245 TVKDLVSRF-LVVQPQKRYTAE 265

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.5 bits (203), Expect = 1e-18
 Identities = 55/301 (18%), Positives = 107/301 (35%), Gaps = 50/301 (16%)

Query: 23  PKCFIRRFSYKDIKMATDGFHRIVYTNSHGAAYKARFQDG----EVALVKEIQALNLEKD 78
           P  +     + DIK     F  ++   + G   KAR +      + A +K ++    + D
Sbjct: 1   PTIY-PVLDWNDIK-----FQDVIGEGNFGQVLKARIKKDGLRMDAA-IKRMKEYASKDD 53

Query: 79  --AFYREIQLLGRL-HHRHLLALQG-FSTGRKRLLVFDNIENGSLKEHL----------- 123
              F  E+++L +L HH +++ L G         L  +   +G+L + L           
Sbjct: 54  HRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPA 113

Query: 124 ---NDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSD 180
               +   + L  +  L  A  VA  ++YL   S     +  +++ +I++ EN+ AK++D
Sbjct: 114 FAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIAD 170

Query: 181 VGFFNSVRNYATM------PHSSCPEDCSTQDCSNI--IFQLGVLILELVTGQSPEEGDV 232
            G       Y               E  +    +    ++  GVL+ E+V+        +
Sbjct: 171 FGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM 230

Query: 233 DLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYL 292
              +  +   +          +        E+  L+   R C + K     S  QI   L
Sbjct: 231 TCAELYE--KLPQGYRLEKPLNC-----DDEVYDLM---RQCWREKPYERPSFAQILVSL 280

Query: 293 Q 293
            
Sbjct: 281 N 281

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.8 bits (204), Expect = 1e-18
 Identities = 37/247 (14%), Positives = 89/247 (36%), Gaps = 22/247 (8%)

Query: 50  SHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQG-FSTGRKR 107
             G  ++       +  + K ++    ++    +EI +L    HR++L L   F +  + 
Sbjct: 17  EFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEEL 76

Query: 108 LLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSS 167
           +++F+ I    + E +N      L+ +  +     V  AL++L    +  + +  I   +
Sbjct: 77  VMIFEFISGLDIFERINTS-AFELNEREIVSYVHQVCEALQFL---HSHNIGHFDIRPEN 132

Query: 168 IMLD--ENFTAKLSDVG---FFNSVRNYATMPHSSCPEDCSTQDCSNI-----IFQLGVL 217
           I+     + T K+ + G         N+  +  +             +     ++ LG L
Sbjct: 133 IIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTL 192

Query: 218 ILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKT 277
           +  L++G +P   + +        +   +       ++     S E    +    L  + 
Sbjct: 193 VYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEI-----SIEAMDFVDRL-LVKER 246

Query: 278 KDKPTIS 284
           K + T S
Sbjct: 247 KSRMTAS 253

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.6 bits (198), Expect = 5e-18
 Identities = 43/290 (14%), Positives = 101/290 (34%), Gaps = 58/290 (20%)

Query: 50  SHGAAYKARFQDG-------EVALVKEI--QALNLEKDAFYREIQLLGRL-HHRHLLALQ 99
           + G    A            +VA VK +  +A + E++A   E++++ +L  H +++ L 
Sbjct: 49  AFGKVMNATAYGISKTGVSIQVA-VKMLKEKADSSEREALMSELKMMTQLGSHENIVNLL 107

Query: 100 G-FSTGRKRLLVFDNIENGSLKEHLNDPLK---------------------TPLDWKTRL 137
           G  +      L+F+    G L  +L    +                       L ++  L
Sbjct: 108 GACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLL 167

Query: 138 QIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGF---------FNSVR 188
             A  VA  +E+L         +  +++ ++++      K+ D G          +    
Sbjct: 168 CFAYQVAKGMEFL---EFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRG 224

Query: 189 NYATMPHSSCPEDCSTQ--DCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISS 245
           N         PE          + ++  G+L+ E+ + G +P  G            + +
Sbjct: 225 NARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI----------PVDA 274

Query: 246 SIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNE 295
           + +++I             +++  + + C     +   S P ++ +L  +
Sbjct: 275 NFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQ 324

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.9 bits (196), Expect = 8e-18
 Identities = 48/281 (17%), Positives = 104/281 (37%), Gaps = 51/281 (18%)

Query: 50  SHGAAYKARF------QDGEVALVKEI--QALNLEKDAFYREIQLLGRLHHRHLLALQG- 100
           S G  Y+         +      +K +   A   E+  F  E  ++   +  H++ L G 
Sbjct: 32  SFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGV 91

Query: 101 FSTGRKRLLVFDNIENGSLKEHL--------NDPLKTPLDWKTRLQIAIGVAAALEYLLL 152
            S G+  L++ + +  G LK +L        N+P+  P      +Q+A  +A  + YL  
Sbjct: 92  VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYL-- 149

Query: 153 FSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYATMPHSSC---------PEDCS 203
            +     +  +++ + M+ E+FT K+ D G    +                    PE   
Sbjct: 150 -NANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLK 208

Query: 204 TQ--DCSNIIFQLGVLILELVTGQSP---EEGDVDLIQWIQESSISSSIHRMIDPDLGGS 258
                  + ++  GV++ E+ T          +  +++++ E  +               
Sbjct: 209 DGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC-------- 260

Query: 259 YDSKELKKLLAVARLCIKT--KDKPTISIPQISRYLQNEVD 297
                L +L+   R+C +   K +P+    +I   ++ E++
Sbjct: 261 --PDMLFELM---RMCWQYNPKMRPSFL--EIISSIKEEME 294

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.4 bits (195), Expect = 8e-18
 Identities = 52/290 (17%), Positives = 105/290 (36%), Gaps = 43/290 (14%)

Query: 25  CFIRRFSYKDIKMATDGFHRIVYTNSHGAAYKARF-----QDGEVALVKEIQALNLEK-- 77
           C I     + ++   DG        S G   +  +     +   VA VK ++   L +  
Sbjct: 3   CLIGEKDLRLLEKLGDG--------SFGVVRRGEWDAPSGKTVSVA-VKCLKPDVLSQPE 53

Query: 78  --DAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKT 135
             D F RE+  +  L HR+L+ L G        +V +    GSL + L    +      T
Sbjct: 54  AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKH-QGHFLLGT 112

Query: 136 RLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYATM-- 193
             + A+ VA  + YL    +    +  +++ +++L      K+ D G   ++        
Sbjct: 113 LSRYAVQVAEGMGYL---ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 169

Query: 194 -------PHSSCPEDC---STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSI 243
                  P + C  +     T   ++  +  GV + E+ T        ++  Q + +  I
Sbjct: 170 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK--I 227

Query: 244 SSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQ 293
                R+  P+       +++  ++       K +D+PT     +  +L 
Sbjct: 228 DKEGERLPRPE----DCPQDIYNVMVQC-WAHKPEDRPTFV--ALRDFLL 270

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.4 bits (195), Expect = 2e-17
 Identities = 34/255 (13%), Positives = 84/255 (32%), Gaps = 34/255 (13%)

Query: 50  SHGAAYKARF-QDGEVA----LVKEIQALNLEKD--AFYREIQLLGRLHHRHLLALQGFS 102
           + G  YK  +  +GE       +KE++     K       E  ++  + + H+  L G  
Sbjct: 21  AFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGIC 80

Query: 103 TGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVS 162
                 L+   +  G L +++ +  K  +  +  L   + +A  + YL    +  + +  
Sbjct: 81  LTSTVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYL---EDRRLVHRD 136

Query: 163 ISSSSIMLDENFTAKLSDVGFFNSVRNYATMPHSSC---------PEDCSTQ--DCSNII 211
           +++ ++++      K++D G    +       H+            E    +     + +
Sbjct: 137 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 196

Query: 212 FQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVA 271
           +  GV + EL+T  S     +   +          I  +++              +  + 
Sbjct: 197 WSYGVTVWELMTFGSKPYDGIPASE----------ISSILEKGERLPQPPICTIDVYMIM 246

Query: 272 RLCIKT--KDKPTIS 284
             C       +P   
Sbjct: 247 VKCWMIDADSRPKFR 261

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.7 bits (193), Expect = 2e-17
 Identities = 42/262 (16%), Positives = 90/262 (34%), Gaps = 32/262 (12%)

Query: 50  SHGAAYKARFQDGE-----VALVKEIQALNLE--KDAFYREIQLLGRLHHRHLLALQGFS 102
             G  ++  +   E     VA +K  +    +  ++ F +E   + +  H H++ L G  
Sbjct: 19  QFGDVHQGIYMSPENPALAVA-IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI 77

Query: 103 TGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVS 162
           T     ++ +    G L+  L       LD  + +  A  ++ AL YL    +    +  
Sbjct: 78  TENPVWIIMELCTLGELRSFLQVRKY-SLDLASLILYAYQLSTALAYL---ESKRFVHRD 133

Query: 163 ISSSSIMLDENFTAKLSDVGFFNSVRNYATMPHSSC--------PEDCSTQ--DCSNIIF 212
           I++ ++++  N   KL D G    + +      S          PE  + +    ++ ++
Sbjct: 134 IAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVW 193

Query: 213 QLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVAR 272
             GV + E++         V     I    I +     + P+         L  L+    
Sbjct: 194 MFGVCMWEILMHGVKPFQGVKNNDVIGR--IENGERLPMPPNC-----PPTLYSLMTKC- 245

Query: 273 LCIKTKDKPTISIPQISRYLQN 294
                  +P  +  ++   L  
Sbjct: 246 WAYDPSRRPRFT--ELKAQLST 265

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.1 bits (192), Expect = 2e-17
 Identities = 39/251 (15%), Positives = 78/251 (31%), Gaps = 28/251 (11%)

Query: 50  SHGAAYKARF-QDGEVALVKEIQALNLEK--DAFYREIQLLGRLHHRHLLALQGFSTGRK 106
           ++G    A      E   VK +         +   +EI +   L+H +++   G      
Sbjct: 17  AYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN 76

Query: 107 RL-LVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISS 165
              L  +    G L + +       +      +    + A + YL     + + +  I  
Sbjct: 77  IQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYL---HGIGITHRDIKP 131

Query: 166 SSIMLDENFTAKLSDVGFFNSVR--NYATMPHSSC-------PEDCSTQDCSNI---IFQ 213
            +++LDE    K+SD G     R  N   + +  C       PE    ++       ++ 
Sbjct: 132 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 191

Query: 214 LGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARL 273
            G+++  ++ G+ P +   D  Q   +                          LL    L
Sbjct: 192 CGIVLTAMLAGELPWDQPSDSCQEYSD------WKEKKTYLNPWKKIDSAPLALLHKI-L 244

Query: 274 CIKTKDKPTIS 284
                 + TI 
Sbjct: 245 VENPSARITIP 255

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 77.1 bits (189), Expect = 5e-17
 Identities = 39/241 (16%), Positives = 84/241 (34%), Gaps = 32/241 (13%)

Query: 50  SHGAAYKARF-QDGEVALVKEIQALNLEKDA----FYREIQLLGRLHHRHLLALQGF--- 101
                + AR  +      VK ++A      +    F RE Q    L+H  ++A+      
Sbjct: 19  GMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEA 78

Query: 102 --STGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMY 159
               G    +V + ++  +L++ ++     P+  K  +++      AL +        + 
Sbjct: 79  ETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFS---HQNGII 133

Query: 160 YVSISSSSIMLDENFTAKLSDVGFFNSVRNYATM----------PHSSCPEDCSTQ--DC 207
           +  +  ++IM+      K+ D G   ++ +                   PE       D 
Sbjct: 134 HRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDA 193

Query: 208 SNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL 267
            + ++ LG ++ E++TG+ P  GD  +    Q               L     S +L  +
Sbjct: 194 RSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGL-----SADLDAV 248

Query: 268 L 268
           +
Sbjct: 249 V 249

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.0 bits (186), Expect = 2e-16
 Identities = 57/285 (20%), Positives = 111/285 (38%), Gaps = 33/285 (11%)

Query: 28  RRFSYKDIKMATDGFHRIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQL 86
           +  SY D K+  +G        S G  Y+A+    GE+  +K++     +K    RE+Q+
Sbjct: 18  QEVSYTDTKVIGNG--------SFGVVYQAKLCDSGELVAIKKV---LQDKRFKNRELQI 66

Query: 87  LGRLHHRHLLALQGF--STGRKR-----LLVFDNIENGSLKEHLNDP-LKTPLDWKTRLQ 138
           + +L H +++ L+ F  S+G K+      LV D +     +   +    K  L       
Sbjct: 67  MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126

Query: 139 IAIGVAAALEYLLLFSNLPMYYVSISSSSIMLD-ENFTAKLSDVGFFNSVRN------YA 191
               +  +L Y+    +  + +  I   +++LD +    KL D G    +        Y 
Sbjct: 127 YMYQLFRSLAYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 183

Query: 192 TMPHSSCPEDCSTQ---DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIH 248
              +   PE          S  ++  G ++ EL+ GQ    GD  + Q ++   +  +  
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT 243

Query: 249 RMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQ 293
           R    ++  +Y   +  ++ A     +     P  +I   SR L+
Sbjct: 244 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLE 288

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.7 bits (185), Expect = 3e-16
 Identities = 44/281 (15%), Positives = 94/281 (33%), Gaps = 48/281 (17%)

Query: 50  SHGAAYKARF------QDGEVALVKEI--QALNLEKDAFYREIQLLGR-LHHRHLLALQG 100
           + G   +A               VK +   A + E  A   E+++L    HH +++ L G
Sbjct: 25  AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 84

Query: 101 --FSTGRKRLLVFDNIENGSLKEHL--------------NDPLKTPLDWKTRLQIAIGVA 144
                G   +++ +  + G+L  +L               D  K  L  +  +  +  VA
Sbjct: 85  ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVA 144

Query: 145 AALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYATMPHSSCPE---- 200
             +E+L   ++    +  +++ +I+L E    K+ D G    +                 
Sbjct: 145 KGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 201

Query: 201 -------DCSTQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDP 253
                          + ++  GVL+ E+ +  +     V + +            RM  P
Sbjct: 202 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR--RLKEGTRMRAP 259

Query: 254 DLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQN 294
           D    Y + E+ + +     C   +     +  ++  +L N
Sbjct: 260 D----YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGN 293

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.1 bits (184), Expect = 3e-16
 Identities = 40/231 (17%), Positives = 81/231 (35%), Gaps = 22/231 (9%)

Query: 42  FHRIVYTNSHGAAYKAR-FQDGEVALVKEIQALNLEKD----AFYREIQLLGRLHHRHLL 96
           F +I+   S      AR         +K ++  ++ K+       RE  ++ RL H   +
Sbjct: 12  FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 71

Query: 97  ALQG-FSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSN 155
            L   F    K        +NG L +++        D          + +ALEYL     
Sbjct: 72  KLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYL---HG 126

Query: 156 LPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN---------YATMPHSSCPEDCSTQ- 205
             + +  +   +I+L+E+   +++D G    +           +        PE  + + 
Sbjct: 127 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS 186

Query: 206 -DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDL 255
              S+ ++ LG +I +LV G  P     + + + +   +         P  
Sbjct: 187 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 237

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.5 bits (182), Expect = 5e-16
 Identities = 39/201 (19%), Positives = 77/201 (38%), Gaps = 17/201 (8%)

Query: 50  SHGAAYKARF-QDGEVALVKEIQALNLEKDA---FYREIQLLGRLHHRHLLALQGFSTGR 105
           ++G  YKAR    GEV  +K+I+     +       REI LL  L+H +++ L       
Sbjct: 14  TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 73

Query: 106 KRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISS 165
            +L +     +  LK+ ++    T +           +   L +     +  + +  +  
Sbjct: 74  NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC---HSHRVLHRDLKP 130

Query: 166 SSIMLDENFTAKLSDVGFFNSVRNYATMPHSSC-------PE---DCSTQDCSNIIFQLG 215
            +++++     KL+D G   +                   PE    C     +  I+ LG
Sbjct: 131 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 190

Query: 216 VLILELVTGQSPEEGDVDLIQ 236
            +  E+VT ++   GD ++ Q
Sbjct: 191 CIFAEMVTRRALFPGDSEIDQ 211

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.0 bits (181), Expect = 1e-15
 Identities = 43/233 (18%), Positives = 82/233 (35%), Gaps = 33/233 (14%)

Query: 50  SHGAAYKARF-QDGEVALVKEIQALNLEKD----AFYREIQLLGR-LHHRHLLALQG-FS 102
           S G  + A F +  +   +K ++   +  D        E ++L     H  L  +   F 
Sbjct: 14  SFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQ 73

Query: 103 TGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVS 162
           T      V + +  G L  H+        D       A  +   L++L    +  + Y  
Sbjct: 74  TKENLFFVMEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFL---HSKGIVYRD 128

Query: 163 ISSSSIMLDENFTAKLSDVGFFNSVRNYATMPHSSC-------PEDCSTQ--DCSNIIFQ 213
           +   +I+LD++   K++D G            ++ C       PE    Q  + S   + 
Sbjct: 129 LKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWS 188

Query: 214 LGVLILELVTGQSPEEGD--VDLIQWIQE------SSISSS----IHRMIDPD 254
            GVL+ E++ GQSP  G    +L   I+         +       + ++   +
Sbjct: 189 FGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVRE 241

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.6 bits (177), Expect = 3e-15
 Identities = 47/236 (19%), Positives = 83/236 (35%), Gaps = 23/236 (9%)

Query: 50  SHGAAYKARF-QDGEVALVKEIQALNLEKD------AFYREIQLLGRLHHRHLLALQGFS 102
                YKAR     ++  +K+I+  +  +          REI+LL  L H +++ L    
Sbjct: 10  QFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAF 69

Query: 103 TGRKRL-LVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYV 161
             +  + LVFD +E        ++     L         +     LEYL       + + 
Sbjct: 70  GHKSNISLVFDFMETDLEVIIKDN--SLVLTPSHIKAYMLMTLQGLEYL---HQHWILHR 124

Query: 162 SISSSSIMLDENFTAKLSDVGFFNSVRNYATMPHSSC-------PEDCSTQDCSNI---I 211
            +  ++++LDEN   KL+D G   S  +                PE         +   +
Sbjct: 125 DLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDM 184

Query: 212 FQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL 267
           + +G ++ EL+       GD DL Q  +      +      PD+    D    K  
Sbjct: 185 WAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSF 240

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.9 bits (173), Expect = 1e-14
 Identities = 44/253 (17%), Positives = 95/253 (37%), Gaps = 27/253 (10%)

Query: 50  SHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRL-HHRHLLAL----QGFST 103
            +G   +    +  E   +K +Q    +     RE++L  R     H++ +    +    
Sbjct: 24  INGKVLQIFNKRTQEKFALKMLQ----DCPKARREVELHWRASQCPHIVRIVDVYENLYA 79

Query: 104 GRKRL-LVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVS 162
           GRK L +V + ++ G L   + D        +   +I   +  A++YL    ++ + +  
Sbjct: 80  GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL---HSINIAHRD 136

Query: 163 ISSSSIMLDENFTAKLSDVGFF---------NSVRNYATMPHSSCPEDCSTQ--DCSNII 211
           +   +++        +  +  F         NS+      P+   PE    +  D S  +
Sbjct: 137 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 196

Query: 212 FQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVA 271
           + LGV++  L+ G  P   +   +           + +   P+   S  S+E+K L+   
Sbjct: 197 WSLGVIMYILLCGYPPFYSN-HGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNL 255

Query: 272 RLCIKTKDKPTIS 284
            L  +   + TI+
Sbjct: 256 -LKTEPTQRMTIT 267

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 70.1 bits (171), Expect = 2e-14
 Identities = 44/228 (19%), Positives = 83/228 (36%), Gaps = 27/228 (11%)

Query: 50  SHGAAYKARF-QDGEVALVKEIQALNLEK----DAFYREIQLLGRLHHRHLLALQGFSTG 104
           S G  +  R   +G    +K ++   + +    +    E  +L  + H  ++ + G    
Sbjct: 16  SFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD 75

Query: 105 RKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSIS 164
            +++ +  +   G     L                A  V  ALEYL    +  + Y  + 
Sbjct: 76  AQQIFMIMDYIEGGELFSLLRK-SQRFPNPVAKFYAAEVCLALEYL---HSKDIIYRDLK 131

Query: 165 SSSIMLDENFTAKLSDVGFFNSVRNYAT----MPHSSCPEDCSTQ--DCSNIIFQLGVLI 218
             +I+LD+N   K++D GF   V +        P    PE  ST+  + S   +  G+LI
Sbjct: 132 PENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILI 191

Query: 219 LELVTGQSPEEGD--VDLIQWIQE------SSISSS----IHRMIDPD 254
            E++ G +P      +   + I           +      + R+I  D
Sbjct: 192 YEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRD 239

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 69.1 bits (168), Expect = 4e-14
 Identities = 36/219 (16%), Positives = 83/219 (37%), Gaps = 17/219 (7%)

Query: 50  SHGAAYKARFQDGEVALVKEIQALNLEKDA---FYREIQLLGRLHHRHLLALQGFSTGRK 106
           ++G  YKA+   GE   +K+I+    ++       REI +L  L H +++ L      +K
Sbjct: 14  TYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKK 73

Query: 107 RLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSS 166
           RL++     +  LK+ L+   +  L+  T     + +   + Y     +  + +  +   
Sbjct: 74  RLVLVFEHLDQDLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYC---HDRRVLHRDLKPQ 129

Query: 167 SIMLDENFTAKLSDVGFFNSVRNYATMPHSSCP----------EDCSTQDCSNIIFQLGV 216
           +++++     K++D G   +                               +  I+ +G 
Sbjct: 130 NLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGC 189

Query: 217 LILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDL 255
           +  E+V G     G  +  Q ++   I  + +    P++
Sbjct: 190 IFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNV 228

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 69.4 bits (169), Expect = 5e-14
 Identities = 41/261 (15%), Positives = 82/261 (31%), Gaps = 29/261 (11%)

Query: 50  SHGAAYKARF-QDGEVALVKEIQALNLEKDA-------FYREIQLLGRLHHRHLLALQG- 100
             G  Y  R    G++  +K +    ++              + L+       ++ +   
Sbjct: 16  GFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYA 75

Query: 101 FSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYY 160
           F T  K   + D +  G L  HL+               A  +   LE++    N  + Y
Sbjct: 76  FHTPDKLSFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHM---HNRFVVY 130

Query: 161 VSISSSSIMLDENFTAKLSDVGFFNSVRNYATMPHSSCPEDCSTQ--------DCSNIIF 212
             +  ++I+LDE+   ++SD+G                    + +        D S   F
Sbjct: 131 RDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWF 190

Query: 213 QLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVAR 272
            LG ++ +L+ G SP           +   ++ ++   +         S EL+ LL    
Sbjct: 191 SLGCMLFKLLRGHSPFRQH-KTKDKHEIDRMTLTMAVELPDSF-----SPELRSLLEGL- 243

Query: 273 LCIKTKDKPTISIPQISRYLQ 293
           L      +            +
Sbjct: 244 LQRDVNRRLGCLGRGAQEVKE 264

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.1 bits (163), Expect = 2e-13
 Identities = 41/256 (16%), Positives = 84/256 (32%), Gaps = 32/256 (12%)

Query: 50  SHGAAYKARF-QDGEVALVKEIQALNLEKD-------AFYREIQLLGRLHHRHLLALQG- 100
                 K R    G     K I+    +            RE+ +L  + H +++ L   
Sbjct: 22  QFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEV 81

Query: 101 FSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYY 160
           +      +L+ + +  G L + L +  K  L  +   +    +   + Y     +L + +
Sbjct: 82  YENKTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYY---LHSLQIAH 136

Query: 161 VSISSSSIMLDEN----FTAKLSDVGFFNSVRNYATMPHS------SCPEDCSTQDCSNI 210
             +   +IML +        K+ D G  + +       +         PE  + +     
Sbjct: 137 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLE 196

Query: 211 --IFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLL 268
             ++ +GV+   L++G SP  GD         S+++         +      S   K  +
Sbjct: 197 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT-----SALAKDFI 251

Query: 269 AVARLCIKTKDKPTIS 284
               L    K + TI 
Sbjct: 252 RRL-LVKDPKKRMTIQ 266

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.9 bits (160), Expect = 4e-13
 Identities = 41/243 (16%), Positives = 79/243 (32%), Gaps = 30/243 (12%)

Query: 50  SHGAAYKARF-QDGEVALVKEIQALNLEKDA-------FYREIQLLGRLHHRH--LLALQ 99
             G+ Y      D     +K ++   +              E+ LL ++      ++ L 
Sbjct: 16  GFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 75

Query: 100 G-FSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPM 158
             F      +L+ +  E            +  L  +        V  A+ +     N  +
Sbjct: 76  DWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHC---HNCGV 131

Query: 159 YYVSISSSSIMLDEN-FTAKLSDVGFFNSVRNYATM-----PHSSCPEDCSTQ---DCSN 209
            +  I   +I++D N    KL D G    +++            S PE          S 
Sbjct: 132 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSA 191

Query: 210 IIFQLGVLILELVTGQSPEEGDVDLI--QWIQESSISSS----IHRMIDPDLGGSYDSKE 263
            ++ LG+L+ ++V G  P E D ++I  Q      +SS     I   +          +E
Sbjct: 192 AVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEE 251

Query: 264 LKK 266
           ++ 
Sbjct: 252 IQN 254

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.6 bits (159), Expect = 9e-13
 Identities = 44/223 (19%), Positives = 80/223 (35%), Gaps = 24/223 (10%)

Query: 50  SHGAAYKARF-QDGEVALVKEIQALNL----EKDAFYREIQLLGRLHHRHLLALQGFSTG 104
           + G     R    G    +K ++   +    E      E ++L    H  L AL+     
Sbjct: 17  TFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT 76

Query: 105 RKRL-LVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSI 163
             RL  V +    G L  HL+   +     +        + +ALEY     +  + Y  I
Sbjct: 77  HDRLCFVMEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEY---LHSRDVVYRDI 131

Query: 164 SSSSIMLDENFTAKLSDVGFFNSVRNYATMPHSSC--PEDCSTQDCSNI-------IFQL 214
              ++MLD++   K++D G      +      + C  PE  + +   +         + L
Sbjct: 132 KLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGL 191

Query: 215 GVLILELVTGQSPEEGD--VDLIQWIQESSISSSIHRMIDPDL 255
           GV++ E++ G+ P        L + I    I     R + P+ 
Sbjct: 192 GVVMYEMMCGRLPFYNQDHERLFELILMEEI--RFPRTLSPEA 232

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.2 bits (158), Expect = 1e-12
 Identities = 31/214 (14%), Positives = 72/214 (33%), Gaps = 29/214 (13%)

Query: 50  SHGAAYKARF-QDGEVALVKEIQALNLEKDA--FYREIQLLGRLHHRHLLALQGF----- 101
           ++G    A    +     +K+I     +       REI++L R  H +++ +        
Sbjct: 20  AYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT 79

Query: 102 STGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYV 161
               K + +  ++    L + L       L           +   L+Y+    +  + + 
Sbjct: 80  IEQMKDVYLVTHLMGADLYKLLK---TQHLSNDHICYFLYQILRGLKYI---HSANVLHR 133

Query: 162 SISSSSIMLDENFTAKLSDVGF----------FNSVRNYATMPHSSCPE---DCSTQDCS 208
            +  S+++L+     K+ D G              +  Y        PE   +      S
Sbjct: 134 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 193

Query: 209 NIIFQLGVLILELVTGQSPEEGD--VDLIQWIQE 240
             I+ +G ++ E+++ +    G   +D +  I  
Sbjct: 194 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 227

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.9 bits (157), Expect = 1e-12
 Identities = 41/278 (14%), Positives = 99/278 (35%), Gaps = 42/278 (15%)

Query: 46  VYTNSHGAAYKARFQDGEVALVKEIQALNLEKDA--FYREIQLLGRL-HHRHLLALQG-F 101
           V         K +        VK +++   EKD      E++++  +  H++++ L G  
Sbjct: 29  VVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC 88

Query: 102 STGRKRLLVFDNIENGSLKEHL--------------NDPLKTPLDWKTRLQIAIGVAAAL 147
           +      ++ +    G+L+E+L              +   +  L  K  +  A  VA  +
Sbjct: 89  TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGM 148

Query: 148 EYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYATMPHSSC--------- 198
           EYL   ++    +  +++ ++++ E+   K++D G    + +      ++          
Sbjct: 149 EYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA 205

Query: 199 PEDCSTQDCSNI--IFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLG 256
           PE    +  ++   ++  GVL+ E+ T        V + +          + +++     
Sbjct: 206 PEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----------LFKLLKEGHR 255

Query: 257 GSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQN 294
               S    +L  + R C         +  Q+   L  
Sbjct: 256 MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 293

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.6 bits (151), Expect = 7e-12
 Identities = 47/275 (17%), Positives = 100/275 (36%), Gaps = 37/275 (13%)

Query: 50  SHGAAYKARF-QDGEVALVKEIQALNLEKD---AFYREIQLLGRLHHRHLLALQG----- 100
           + G  +KAR  + G+   +K++   N ++       REI++L  L H +++ L       
Sbjct: 22  TFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTK 81

Query: 101 ----FSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNL 156
                       LVFD  E+       N  +K  L    R  +   +   L Y+      
Sbjct: 82  ASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR--VMQMLLNGLYYI---HRN 136

Query: 157 PMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYATMPHSSCPEDCSTQDCSNI------ 210
            + +  + ++++++  +   KL+D G   +         +       T            
Sbjct: 137 KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGE 196

Query: 211 --------IFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSK 262
                   ++  G ++ E+ T     +G+ +  Q    S +  SI   + P++  +Y+  
Sbjct: 197 RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNV-DNYELY 255

Query: 263 ELKKLLAVARLCIKTKDKPTISIPQ----ISRYLQ 293
           E  +L+   +  +K + K  +  P     I + L 
Sbjct: 256 EKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLV 290

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.0 bits (147), Expect = 3e-11
 Identities = 33/204 (16%), Positives = 72/204 (35%), Gaps = 17/204 (8%)

Query: 50  SHGAAYKARF-QDGEVALVKEIQALNLEKD---AFYREIQLLGRLHHRHLLALQG-FSTG 104
           ++GA   A   + G    +K++      +      YRE++LL  + H +++ L   F+  
Sbjct: 30  AYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPD 89

Query: 105 RKRLLVFDNIENGSLKEHLNDPL--KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVS 162
                  D              L     L       +   +   L Y+       + +  
Sbjct: 90  ETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYI---HAAGIIHRD 146

Query: 163 ISSSSIMLDENFTAKLSDVGFFNSVRNYAT----MPHSSCPE---DCSTQDCSNIIFQLG 215
           +   ++ ++E+   K+ D G      +  T          PE   +      +  I+ +G
Sbjct: 147 LKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVG 206

Query: 216 VLILELVTGQSPEEGDVDLIQWIQ 239
            ++ E++TG++  +G   L Q  +
Sbjct: 207 CIMAEMITGKTLFKGSDHLDQLKE 230

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 60.6 bits (146), Expect = 5e-11
 Identities = 40/223 (17%), Positives = 80/223 (35%), Gaps = 25/223 (11%)

Query: 50  SHGAAYKARF-QDGEVALVKEIQALNLEKDA----FYREIQLLGRLHHRHLLALQGFSTG 104
           S G     +  + G    +K +    + K         E ++L  ++   L+ L+     
Sbjct: 53  SFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD 112

Query: 105 RKRL-LVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSI 163
              L +V + +  G +  HL                A  +    EYL    +L + Y  +
Sbjct: 113 NSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL---HSLDLIYRDL 167

Query: 164 SSSSIMLDENFTAKLSDVGF----FNSVRNYATMPHSSCPEDCSTQ--DCSNIIFQLGVL 217
              ++++D+    +++D GF              P +  PE   ++  + +   + LGVL
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVL 227

Query: 218 ILELVTGQSPEEGD--VDLIQWIQE------SSISSSIHRMID 252
           I E+  G  P   D  + + + I        S  SS +  ++ 
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.0 bits (139), Expect = 2e-10
 Identities = 32/208 (15%), Positives = 76/208 (36%), Gaps = 24/208 (11%)

Query: 50  SHGAAYKARFQ--DGEVALVKEIQALNLEKD---AFYREIQLLGRL---HHRHLLALQGF 101
           ++G  +KAR     G    +K ++    E+    +  RE+ +L  L    H +++ L   
Sbjct: 19  AYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDV 78

Query: 102 STGRK-----RLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNL 156
            T  +     +L +     +  L  +L+   +  +  +T   +   +   L++L    + 
Sbjct: 79  CTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL---HSH 135

Query: 157 PMYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYATM------PHSSCPEDCSTQDCSNI 210
            + +  +   +I++  +   KL+D G          +           PE       +  
Sbjct: 136 RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATP 195

Query: 211 --IFQLGVLILELVTGQSPEEGDVDLIQ 236
             ++ +G +  E+   +    G  D+ Q
Sbjct: 196 VDLWSVGCIFAEMFRRKPLFRGSSDVDQ 223

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.9 bits (139), Expect = 3e-10
 Identities = 50/242 (20%), Positives = 82/242 (33%), Gaps = 33/242 (13%)

Query: 50  SHGAAYKAR----FQDGEVALVKEIQALNLEKDA-----FYREIQLLGRLHHRHLLA--L 98
           ++G  +  R       G++  +K ++   + + A        E Q+L  +     L    
Sbjct: 36  AYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLH 95

Query: 99  QGFSTGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPM 158
             F T  K  L+ D I  G L  HL+   +          + I V   +  L     L +
Sbjct: 96  YAFQTETKLHLILDYINGGELFTHLSQRERFTEHE-----VQIYVGEIVLALEHLHKLGI 150

Query: 159 YYVSISSSSIMLDENFTAKLSDVGF---FNSVRNYATMPHSSCPEDCSTQ---------D 206
            Y  I   +I+LD N    L+D G    F +             E  +           D
Sbjct: 151 IYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHD 210

Query: 207 CSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKK 266
            +   + LGVL+ EL+TG SP   D +     + S            ++     S   K 
Sbjct: 211 KAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEM-----SALAKD 265

Query: 267 LL 268
           L+
Sbjct: 266 LI 267

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 55.6 bits (133), Expect = 1e-09
 Identities = 39/274 (14%), Positives = 79/274 (28%), Gaps = 26/274 (9%)

Query: 50  SHGAAYKAR-FQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQG--FSTGRK 106
           S G  Y       GE   +K ++ +  +    + E ++   +     +       + G  
Sbjct: 19  SFGDIYLGTDIAAGEEVAIK-LECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDY 77

Query: 107 RLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYL---------LLFSNLP 157
            ++V + +                   KT L +A  + + +EY+         +   N  
Sbjct: 78  NVMVMELLGPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFL 135

Query: 158 MYYVSISSSSIMLDENFTAKLSDVGFFNSVRNYAT-----MPHSSCPEDCSTQDCSNI-- 210
           M      +   ++D     K  D      +              +        + S    
Sbjct: 136 MGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDD 195

Query: 211 IFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV 270
           +  LG +++    G  P +G     +  +   IS          L   Y   E    L  
Sbjct: 196 LESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGY-PSEFATYLNF 254

Query: 271 ARLCIKTKDKPTISIPQISRYLQNEVDIQCYKYS 304
               ++  DKP  S   + +  +N    Q + Y 
Sbjct: 255 C-RSLRFDDKPDYS--YLRQLFRNLFHRQGFSYD 285

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.6 bits (130), Expect = 5e-09
 Identities = 33/202 (16%), Positives = 78/202 (38%), Gaps = 17/202 (8%)

Query: 50  SHGAAYKARF-QDGEVALVKEIQALNLEKDA---FYREIQLLGRLHHRHLLALQGFSTGR 105
           + G    A          +K++      +      YRE+ L+  ++H+++++L    T +
Sbjct: 29  AQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQ 88

Query: 106 KRLLVFDN--IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSI 163
           K L  F +  +    +  +L   ++  LD +    +   +   +++L    +  + +  +
Sbjct: 89  KTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL---HSAGIIHRDL 145

Query: 164 SSSSIMLDENFTAKLSDVGFFNSVRNYATM------PHSSCPEDCSTQDCSNI--IFQLG 215
             S+I++  + T K+ D G   +      M       +   PE            I+ +G
Sbjct: 146 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 205

Query: 216 VLILELVTGQSPEEGDVDLIQW 237
            ++ E+V  +    G   + QW
Sbjct: 206 CIMGEMVRHKILFPGRDYIDQW 227

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.0 bits (126), Expect = 1e-08
 Identities = 30/193 (15%), Positives = 69/193 (35%), Gaps = 20/193 (10%)

Query: 50  SHGAAYKARF-QDGEVALVKEIQALNLEKDA---FYREIQLLGRLHHRHLLALQG-FSTG 104
           ++G  +KA+  +  E+  +K ++  + ++       REI LL  L H++++ L     + 
Sbjct: 14  TYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD 73

Query: 105 RKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSIS 164
           +K  LVF+  +         D     LD +        +   L +     +  + +  + 
Sbjct: 74  KKLTLVFEFCDQDLK--KYFDSCNGDLDPEIVKSFLFQLLKGLGFC---HSRNVLHRDLK 128

Query: 165 SSSIMLDENFTAKLSDVGFFNSVRNYATMPHSSCP----------EDCSTQDCSNIIFQL 214
             +++++ N   KL++ G   +         +                     S  ++  
Sbjct: 129 PQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSA 188

Query: 215 GVLILELVTGQSP 227
           G +  EL     P
Sbjct: 189 GCIFAELANAGRP 201

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 51.0 bits (121), Expect = 5e-08
 Identities = 37/247 (14%), Positives = 71/247 (28%), Gaps = 31/247 (12%)

Query: 50  SHGAAYKAR-FQDGEVALVKEIQALNLEKDAFYREIQLLGRL-HHRHLLALQGF-STGRK 106
           S G  ++     + +   +K     + +      E +    L     +  +  F   G  
Sbjct: 17  SFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLH 75

Query: 107 RLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSS 166
            +LV D +  G   E L D        KT    A  + A ++ +       + Y  I   
Sbjct: 76  NVLVIDLL--GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSI---HEKSLVYRDIKPD 130

Query: 167 SIMLDENFT-----AKLSDVGFFNSVRNYATMPHSSC--------------PE--DCSTQ 205
           + ++    +       + D G     R+  T  H                         Q
Sbjct: 131 NFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQ 190

Query: 206 DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELK 265
              + +  LG + +  + G  P +G        +   I          +L   +  +E  
Sbjct: 191 SRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGF-PEEFY 249

Query: 266 KLLAVAR 272
           K +  AR
Sbjct: 250 KYMHYAR 256

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.5 bits (117), Expect = 2e-07
 Identities = 35/201 (17%), Positives = 79/201 (39%), Gaps = 17/201 (8%)

Query: 50  SHGAAYKARF-QDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTGR 105
           ++G+   A   + G    VK++             YRE++LL  + H +++ L    T  
Sbjct: 30  AYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA 89

Query: 106 KRLLVFDNI---ENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVS 162
           + L  F+++    +    +  N      L       +   +   L+Y+    +  + +  
Sbjct: 90  RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI---HSADIIHRD 146

Query: 163 ISSSSIMLDENFTAKLSDVGFFNSVRNYAT----MPHSSCPE---DCSTQDCSNIIFQLG 215
           +  S++ ++E+   K+ D G      +  T          PE   +    + +  I+ +G
Sbjct: 147 LKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 206

Query: 216 VLILELVTGQSPEEGDVDLIQ 236
            ++ EL+TG++   G   + Q
Sbjct: 207 CIMAELLTGRTLFPGTDHIDQ 227

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.3 bits (116), Expect = 2e-07
 Identities = 32/233 (13%), Positives = 68/233 (29%), Gaps = 30/233 (12%)

Query: 50  SHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGR--K 106
                + A+   +     +K ++   +  +A   EI+LL R++                K
Sbjct: 25  HFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILK 84

Query: 107 RLLVFDNIENGSLKEHLNDPL-------------KTPLDWKTRLQIAIGVAAALEYLLLF 153
            L  F++     +   +   +                +      QI+  +   L+Y  + 
Sbjct: 85  LLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDY--MH 142

Query: 154 SNLPMYYVSISSSSIMLD-ENFTAKLSDVGFF---------NSVRNYATMPHSSCPEDCS 203
               + +  I   +++++  +    L  +                N         PE   
Sbjct: 143 RRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLL 202

Query: 204 TQ--DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPD 254
                C   I+    LI EL+TG    E D        +  I+  I  + +  
Sbjct: 203 GAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELP 255

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	309
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.85
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.39
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	98.0
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	97.78
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	97.23
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	97.13
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	96.98

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-51  Score=355.45  Aligned_cols=241  Identities=18%  Similarity=0.277  Sum_probs=197.3

Q ss_pred             ccccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCCCCHHHh
Q 021659           43 HRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKEH  122 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~~sL~~~  122 (309)
                      .+.||+|+||.||+|.++++..||+|++.......+.|.+|++++++++||||++++|++.+...++||||+++|+|.++
T Consensus        18 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~iv~Ey~~~g~L~~~   97 (272)
T d1qpca_          18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDF   97 (272)
T ss_dssp             EEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTTCBHHHH
T ss_pred             eEEEecCCCcEEEEEEECCCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEEeeeccCCeEEEEEeCCCCcHHHH
Confidence            36899999999999999888899999998777778899999999999999999999999988888999999999999998


Q ss_pred             hcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc--------ccCCCC
Q 021659          123 LNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR--------NYATMP  194 (309)
Q Consensus       123 i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~--------~~~~~~  194 (309)
                      +.......+++..++.++.|+++||.||   |+++|+||||||+||+++.++.+||+|||+++...        ...+++
T Consensus        98 ~~~~~~~~l~~~~~~~i~~qi~~gl~~l---H~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~  174 (272)
T d1qpca_          98 LKTPSGIKLTINKLLDMAAQIAEGMAFI---EERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI  174 (272)
T ss_dssp             TTSHHHHTCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCT
T ss_pred             HhhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCccchhheeeecccceeeccccceEEccCCccccccccCCcc
Confidence            8764445799999999999999999999   67899999999999999999999999999997553        235678


Q ss_pred             CCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHH
Q 021659          195 HSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVAR  272 (309)
Q Consensus       195 ~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~  272 (309)
                      .|+|||...  .++.++|||||||++|||+||..|+.......+........      ..+..+...    ...+.+++.
T Consensus       175 ~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~------~~~~~p~~~----~~~l~~li~  244 (272)
T d1qpca_         175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG------YRMVRPDNC----PEELYQLMR  244 (272)
T ss_dssp             TTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT------CCCCCCTTC----CHHHHHHHH
T ss_pred             cccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhc------CCCCCcccC----hHHHHHHHH
Confidence            899999643  34788999999999999999666554443333333222111      111111122    235666777


Q ss_pred             HccCCCCCCCCChHHHHHHHhhhh
Q 021659          273 LCIKTKDKPTISIPQISRYLQNEV  296 (309)
Q Consensus       273 ~cl~~dp~~Rps~~evl~~L~~~~  296 (309)
                      +||+.||++|||+.||++.|++..
T Consensus       245 ~cl~~~P~~Rpt~~ei~~~L~~~f  268 (272)
T d1qpca_         245 LCWKERPEDRPTFDYLRSVLEDFF  268 (272)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHcCCCHhHCcCHHHHHHHhhhhh
Confidence            999999999999999999999754

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.5e-51  Score=350.04  Aligned_cols=241  Identities=18%  Similarity=0.262  Sum_probs=189.6

Q ss_pred             ccccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHHH
Q 021659           43 HRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLKE  121 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~~  121 (309)
                      .+.||+|+||.||+|++.+++.||+|++.......++|.+|++++++++||||++++|++.+ ...++||||+++|+|.+
T Consensus        10 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g~L~~   89 (263)
T d1sm2a_          10 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD   89 (263)
T ss_dssp             EEEEECCSSCCEEEEEETTTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHH
T ss_pred             EEEEeeCCCeEEEEEEECCCCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCCCcHHH
Confidence            46899999999999999888899999998777778899999999999999999999998864 67889999999999999


Q ss_pred             hhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc--------ccCCC
Q 021659          122 HLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR--------NYATM  193 (309)
Q Consensus       122 ~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~--------~~~~~  193 (309)
                      ++... ...+++..+..++.|++.||.||   |+++++||||||+||+++.++.+||+|||+++...        ...+|
T Consensus        90 ~l~~~-~~~~~~~~~~~i~~qia~gl~~l---H~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt  165 (263)
T d1sm2a_          90 YLRTQ-RGLFAAETLLGMCLDVCEGMAYL---EEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP  165 (263)
T ss_dssp             HHHTT-TTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCTTCSGGGEEECGGGCEEECSCC------------------C
T ss_pred             Hhhcc-ccCCCHHHHHHHHHHHHHHHHhh---hccceeecccchhheeecCCCCeEecccchheeccCCCceeecceecC
Confidence            98653 46789999999999999999999   77899999999999999999999999999986543        23567


Q ss_pred             CCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHH
Q 021659          194 PHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVA  271 (309)
Q Consensus       194 ~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~  271 (309)
                      ..|+|||...  .++.++||||||+++|||+|+..|+.......+.........   ....|   ...    ...+.+++
T Consensus       166 ~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~---~~~~p---~~~----~~~l~~li  235 (263)
T d1sm2a_         166 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF---RLYKP---RLA----STHVYQIM  235 (263)
T ss_dssp             TTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTC---CCCCC---TTS----CHHHHHHH
T ss_pred             cccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcC---CCCCc---ccc----CHHHHHHH
Confidence            8899999644  357889999999999999995444433333333322221110   01111   111    23556777


Q ss_pred             HHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          272 RLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       272 ~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                      .+||+.||++|||+.||++.|+++.+
T Consensus       236 ~~cl~~~p~~Rps~~~il~~L~~i~e  261 (263)
T d1sm2a_         236 NHCWKERPEDRPAFSRLLRQLAEIAE  261 (263)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHccCCHhHCcCHHHHHHHHHHHHh
Confidence            79999999999999999999997754

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-50  Score=350.50  Aligned_cols=243  Identities=22%  Similarity=0.283  Sum_probs=192.4

Q ss_pred             ccccccCCCceEEEEEEcCCcEEEEEEeccc---cccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCCCCH
Q 021659           43 HRIVYTNSHGAAYKARFQDGEVALVKEIQAL---NLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSL  119 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~---~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~~sL  119 (309)
                      .+.||+|+||.||+|++.  ..||+|++...   ....+.|.+|++++++++||||+++++++.+...++||||+++|+|
T Consensus        13 ~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~~~~lv~Ey~~~g~L   90 (276)
T d1uwha_          13 GQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSL   90 (276)
T ss_dssp             CSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECCCEEEH
T ss_pred             EEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEeccEEEEEEecCCCCCH
Confidence            368999999999999864  35999998533   2334678999999999999999999999988888999999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---------cc
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---------NY  190 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---------~~  190 (309)
                      .+++... ...+++..+..++.|+++||+||   |+++|+||||||+|||++.++.+||+|||+++...         ..
T Consensus        91 ~~~l~~~-~~~~~~~~~~~i~~qi~~gl~yL---H~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~  166 (276)
T d1uwha_          91 YHHLHII-ETKFEMIKLIDIARQTAQGMDYL---HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL  166 (276)
T ss_dssp             HHHHHTS-CCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC------------C
T ss_pred             HHHHhhc-cCCCCHHHHHHHHHHHHHHHHHH---hcCCEeccccCHHHEEEcCCCCEEEccccceeeccccCCccccccc
Confidence            9999653 45699999999999999999999   67899999999999999999999999999986442         23


Q ss_pred             CCCCCCCCCCCCCC-----CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHH
Q 021659          191 ATMPHSSCPEDCST-----QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELK  265 (309)
Q Consensus       191 ~~~~~~~~PE~~~~-----~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  265 (309)
                      .+|+.|+|||....     ++.++|||||||++|||+||+.||.+.................+..  +......    ..
T Consensus       167 ~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~----~~  240 (276)
T d1uwha_         167 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL--SKVRSNC----PK  240 (276)
T ss_dssp             CCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCG--GGSCTTC----CH
T ss_pred             ccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcc--hhccccc----hH
Confidence            67889999996432     3678999999999999999999998755443322221111111110  1111111    24


Q ss_pred             HHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          266 KLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       266 ~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                      .+.+++.+||+.||++|||+.||++.|+.+..
T Consensus       241 ~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~  272 (276)
T d1uwha_         241 AMKRLMAECLKKKRDERPLFPQILASIELLAR  272 (276)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            56667779999999999999999999987654

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-49  Score=343.30  Aligned_cols=235  Identities=18%  Similarity=0.214  Sum_probs=187.7

Q ss_pred             cccccccCCCceEEEEEEc-CCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC-----CeeEEEEe
Q 021659           42 FHRIVYTNSHGAAYKARFQ-DGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG-----RKRLLVFD  112 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~-----~~~~lv~e  112 (309)
                      |.+.||+|+||+||+|... ++..||+|.+.....   ..+.+.+|++++++++||||+++++++.+     ...|+|||
T Consensus        13 ~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE   92 (270)
T d1t4ha_          13 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE   92 (270)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEE
T ss_pred             eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEe
Confidence            4467999999999999974 578999999854332   34578999999999999999999997642     34679999


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCC--eeecccCCCceeeCC-CCceeEeccccccccc-
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLP--MYYVSISSSSIMLDE-NFTAKLSDVGFFNSVR-  188 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~--i~H~dl~p~nill~~-~~~~kl~dfg~~~~~~-  188 (309)
                      |+++|+|.+++..  ...+++..+..++.|+++||.||   |+++  |+||||||+|||+++ ++.+||+|||+++... 
T Consensus        93 ~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~gl~yL---H~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~  167 (270)
T d1t4ha_          93 LMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFL---HTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  167 (270)
T ss_dssp             CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHH---HTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             CCCCCcHHHHHhc--cccccHHHHHHHHHHHHHHHHHH---HHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccC
Confidence            9999999999976  57899999999999999999999   6666  999999999999974 7899999999997543 


Q ss_pred             ----ccCCCCCCCCCCCCCC-CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHH
Q 021659          189 ----NYATMPHSSCPEDCST-QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKE  263 (309)
Q Consensus       189 ----~~~~~~~~~~PE~~~~-~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  263 (309)
                          ...||+.|+|||...+ ++.++|||||||++|||++|+.||.+............... .+.    ......+   
T Consensus       168 ~~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~-~~~----~~~~~~~---  239 (270)
T d1t4ha_         168 SFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGV-KPA----SFDKVAI---  239 (270)
T ss_dssp             TSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTC-CCG----GGGGCCC---
T ss_pred             CccCCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCC-CCc----ccCccCC---
Confidence                3478999999997544 57899999999999999999999986655444433322211 111    1111112   


Q ss_pred             HHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          264 LKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       264 ~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                       .++.+++.+||++||++|||+.|+++
T Consensus       240 -~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         240 -PEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             -HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             -HHHHHHHHHHccCCHhHCcCHHHHhC
Confidence             23556666999999999999999986

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.1e-51  Score=355.01  Aligned_cols=242  Identities=17%  Similarity=0.237  Sum_probs=197.8

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      .+.||+|+||.||+|.+. +++.||+|++.......+++.+|++++++++||||+++++++.+ ...++||||+++|+|.
T Consensus        22 ~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~  101 (287)
T d1opja_          22 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL  101 (287)
T ss_dssp             EEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHH
T ss_pred             eeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeecccCcchH
Confidence            468999999999999985 58899999998777778899999999999999999999998765 6788999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc--------cCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN--------YAT  192 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~--------~~~  192 (309)
                      +++.......+++..+..++.|++.||.||   |+++|+||||||+|||++.++.+||+|||+++....        ..+
T Consensus       102 ~~l~~~~~~~~~~~~~~~i~~qi~~gL~yL---H~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~~~~g  178 (287)
T d1opja_         102 DYLRECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF  178 (287)
T ss_dssp             HHHHHSCTTTSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEETTEEE
T ss_pred             HHhhhccccchHHHHHHHHHHHHHHHHHHH---HHCCcccCccccCeEEECCCCcEEEccccceeecCCCCceeeccccc
Confidence            999765567899999999999999999999   678999999999999999999999999999976532        135


Q ss_pred             CCCCCCCCCC--CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          193 MPHSSCPEDC--STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       193 ~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      ++.|+|||..  ..++.++|||||||++|||++|..||.......+........ .     .+..+...    ...+.++
T Consensus       179 ~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~-~-----~~~~~~~~----~~~l~~l  248 (287)
T d1opja_         179 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-Y-----RMERPEGC----PEKVYEL  248 (287)
T ss_dssp             CGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT-C-----CCCCCTTC----CHHHHHH
T ss_pred             cccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcC-C-----CCCCCccc----hHHHHHH
Confidence            6789999963  345789999999999999999877765554444333222111 1     11122222    2456677


Q ss_pred             HHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          271 ARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       271 ~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                      +.+||+.||++|||+.|+++.|+.+.+
T Consensus       249 i~~cl~~dP~~Rps~~ei~~~L~~~~~  275 (287)
T d1opja_         249 MRACWQWNPSDRPSFAEIHQAFETMFQ  275 (287)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHTTS
T ss_pred             HHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            779999999999999999999987654

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.8e-50  Score=351.95  Aligned_cols=254  Identities=17%  Similarity=0.287  Sum_probs=190.7

Q ss_pred             cCHHHHHHhhcccc-----------cccccCCCceEEEEEEcC-C---cEEEEEEecccc--ccHHHHHHHHHHHccCCC
Q 021659           30 FSYKDIKMATDGFH-----------RIVYTNSHGAAYKARFQD-G---EVALVKEIQALN--LEKDAFYREIQLLGRLHH   92 (309)
Q Consensus        30 ~~~~~i~~~~~~~~-----------~~lg~G~~~~v~~~~~~~-~---~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h   92 (309)
                      ++++++..++..|.           +.||+|+||.||+|.+.. +   ..||+|.+....  ...+.|.+|+++|++++|
T Consensus         7 ~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H   86 (299)
T d1jpaa_           7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH   86 (299)
T ss_dssp             GGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCC
T ss_pred             CCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCC
Confidence            45555665555443           479999999999999742 2   358889875432  234579999999999999


Q ss_pred             CCcceEeeeEeC-CeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeC
Q 021659           93 RHLLALQGFSTG-RKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLD  171 (309)
Q Consensus        93 ~niv~~~~~~~~-~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~  171 (309)
                      |||++++|++.+ ...++||||+++|+|.+++... ...+++.++..++.|+++||.||   |+++++||||||+|||++
T Consensus        87 pnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~-~~~l~~~~~~~i~~qia~gl~yL---H~~~iiHrDlKp~NILl~  162 (299)
T d1jpaa_          87 PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVN  162 (299)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEEC
T ss_pred             CCCccEEEEEeeCCEEEEEEEecCCCcceeeeccc-cCCCCHHHHHHHHHHHHHHHHHH---hhCCCccCccccceEEEC
Confidence            999999998865 6788999999999999988753 45699999999999999999999   678999999999999999


Q ss_pred             CCCceeEecccccccccc------------cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHH
Q 021659          172 ENFTAKLSDVGFFNSVRN------------YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQ  236 (309)
Q Consensus       172 ~~~~~kl~dfg~~~~~~~------------~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~  236 (309)
                      .++.+||+|||+++....            ..+|+.|+|||...  .++.++|||||||++|||+| |+.||.+.... +
T Consensus       163 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~-~  241 (299)
T d1jpaa_         163 SNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ-D  241 (299)
T ss_dssp             TTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-H
T ss_pred             CCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHH-H
Confidence            999999999999875432            23567899999643  45778999999999999998 89999765432 2


Q ss_pred             HHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcc
Q 021659          237 WIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDI  298 (309)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~  298 (309)
                      ..........      +..+..    ....+.+++.+||+.||++|||+.||++.|+++++.
T Consensus       242 ~~~~i~~~~~------~~~~~~----~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~  293 (299)
T d1jpaa_         242 VINAIEQDYR------LPPPMD----CPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN  293 (299)
T ss_dssp             HHHHHHTTCC------CCCCTT----CCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHHcCCC------CCCCcc----chHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcC
Confidence            2211111110      111111    234566777799999999999999999999987653

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-50  Score=347.53  Aligned_cols=233  Identities=17%  Similarity=0.201  Sum_probs=184.9

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL  119 (309)
                      +.||+|+||+||+|+. .+++.||+|++....  ...+.+.+|++++++++||||+++++++. +...|+||||+++|+|
T Consensus        11 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L   90 (271)
T d1nvra_          11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL   90 (271)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEG
T ss_pred             EEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEeccCCCcH
Confidence            6899999999999997 468999999985432  22456899999999999999999999765 4778899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc---------ccc
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV---------RNY  190 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~---------~~~  190 (309)
                      .+++..  ...+++..+..++.|+++||.||   |+++|+||||||+|||++.++.+||+|||++...         ...
T Consensus        91 ~~~l~~--~~~l~e~~~~~i~~qi~~al~yl---H~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~~  165 (271)
T d1nvra_          91 FDRIEP--DIGMPEPDAQRFFHQLMAGVVYL---HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM  165 (271)
T ss_dssp             GGGSBT--TTBCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCBCCC
T ss_pred             HHHHhc--CCCCCHHHHHHHHHHHHHHHHHH---HHcCCccCcccHHHEEECCCCCEEEccchhheeeccCCccccccce
Confidence            999976  57899999999999999999999   7789999999999999999999999999998753         234


Q ss_pred             CCCCCCCCCCCCCC--C-CCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          191 ATMPHSSCPEDCST--Q-DCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       191 ~~~~~~~~PE~~~~--~-~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      .||+.|+|||...+  . +.++|||||||++|+|+||+.||....................   .+      .......+
T Consensus       166 ~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~---~~------~~~~s~~~  236 (271)
T d1nvra_         166 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL---NP------WKKIDSAP  236 (271)
T ss_dssp             CSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTS---TT------GGGSCHHH
T ss_pred             eeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC---Cc------cccCCHHH
Confidence            68999999996433  2 5679999999999999999999976543322222111111100   00      00112344


Q ss_pred             HHHHHHccCCCCCCCCChHHHHH
Q 021659          268 LAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      .+++.+||+.||++|||+.|+++
T Consensus       237 ~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         237 LALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHcCCChhHCcCHHHHhc
Confidence            56666999999999999999975

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-50  Score=344.70  Aligned_cols=231  Identities=17%  Similarity=0.205  Sum_probs=188.6

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEeccc----cccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQAL----NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~----~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      .+.||+|+||.||+|+.. +++.||+|++...    ....+.+.+|++++++++||||+++++++.+ ...|+||||+++
T Consensus        11 ~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmEy~~~   90 (263)
T d2j4za1          11 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPL   90 (263)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred             EEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEEeecCC
Confidence            368999999999999984 5889999998532    2335678999999999999999999998765 678899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-----ccC
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-----NYA  191 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-----~~~  191 (309)
                      |+|.+++..  ...+++..+..++.|++.||.||   |+++|+||||||+|||++.++.+||+|||++....     ...
T Consensus        91 g~L~~~l~~--~~~l~e~~~~~i~~qi~~al~~l---H~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (263)
T d2j4za1          91 GTVYRELQK--LSKFDEQRTATYITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC  165 (263)
T ss_dssp             CBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCEETT
T ss_pred             CcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeeeeccccceecCCCCEeecccceeeecCCCcccccC
Confidence            999999976  56799999999999999999999   77899999999999999999999999999987553     236


Q ss_pred             CCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHH
Q 021659          192 TMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLA  269 (309)
Q Consensus       192 ~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~  269 (309)
                      ||+.|+|||...+  ++.++|||||||++|+|++|+.||.+..............        ..++...    ...+.+
T Consensus       166 Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~--------~~~p~~~----s~~~~~  233 (263)
T d2j4za1         166 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE--------FTFPDFV----TEGARD  233 (263)
T ss_dssp             EEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTC--------CCCCTTS----CHHHHH
T ss_pred             CCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCC--------CCCCccC----CHHHHH
Confidence            8899999997543  4789999999999999999999998654322221111111        1111111    234556


Q ss_pred             HHHHccCCCCCCCCChHHHHH
Q 021659          270 VARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       270 l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ++.+||++||++|||+.|+++
T Consensus       234 li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         234 LISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHccCCHhHCcCHHHHHc
Confidence            666999999999999999985

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-50  Score=348.78  Aligned_cols=250  Identities=14%  Similarity=0.230  Sum_probs=203.1

Q ss_pred             ccccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCCCCHHHh
Q 021659           43 HRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSLKEH  122 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~~sL~~~  122 (309)
                      .+.||+|+||.||+|.+.++..||+|++.......+.|.+|+.++++++||||++++|++.+...++||||+++|+|..+
T Consensus        22 ~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~lv~Ey~~~g~l~~~  101 (285)
T d1fmka3          22 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDF  101 (285)
T ss_dssp             EEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTTCBHHHH
T ss_pred             eeEEeeCCCeEEEEEEECCCCEEEEEEECcccCCHHHHHHHHHHHHhcccCCEeEEEEEEecCCeEEEEEecCCCchhhh
Confidence            36899999999999999888889999998777778899999999999999999999999987788999999999999998


Q ss_pred             hcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc--------ccCCCC
Q 021659          123 LNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR--------NYATMP  194 (309)
Q Consensus       123 i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~--------~~~~~~  194 (309)
                      +.......+++..++.++.+++.||.||   |+.+++||||||+|||++.++.+||+|||+++...        ...+|+
T Consensus       102 ~~~~~~~~l~~~~~~~i~~~i~~gl~~L---H~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~  178 (285)
T d1fmka3         102 LKGETGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI  178 (285)
T ss_dssp             HSHHHHTTCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCG
T ss_pred             hhhcccccchHHHHHHHHHHHHHHHHHH---hhhheecccccceEEEECCCCcEEEcccchhhhccCCCceeeccccccc
Confidence            8754346799999999999999999999   77899999999999999999999999999986542        235678


Q ss_pred             CCCCCCCC--CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHH
Q 021659          195 HSSCPEDC--STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVAR  272 (309)
Q Consensus       195 ~~~~PE~~--~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~  272 (309)
                      .|+|||..  ...+.++||||||+++|||+||..|+.......+.........      .+......    ...+.+++.
T Consensus       179 ~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~------~~~~~~~~----~~~l~~li~  248 (285)
T d1fmka3         179 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY------RMPCPPEC----PESLHDLMC  248 (285)
T ss_dssp             GGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC------CCCCCTTS----CHHHHHHHH
T ss_pred             cccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC------CCCCCccc----CHHHHHHHH
Confidence            89999964  3457889999999999999997777655554444333322111      11111222    245667777


Q ss_pred             HccCCCCCCCCChHHHHHHHhhhhccccccccc
Q 021659          273 LCIKTKDKPTISIPQISRYLQNEVDIQCYKYSR  305 (309)
Q Consensus       273 ~cl~~dp~~Rps~~evl~~L~~~~~~~~~~~~~  305 (309)
                      +||+.||++|||+.+|++.|++......+.+.+
T Consensus       249 ~cl~~dP~~Rps~~~i~~~L~~~~~~~~p~~~p  281 (285)
T d1fmka3         249 QCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQP  281 (285)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHHTTTSCSCCCCCC
T ss_pred             HHcccCHhHCcCHHHHHHHHhhhhcCCCCCCCC
Confidence            999999999999999999999887776666554

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-50  Score=348.06  Aligned_cols=236  Identities=17%  Similarity=0.236  Sum_probs=188.5

Q ss_pred             cccccCCCceEEEEEEcC---CcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARFQD---GEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~---~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~~  117 (309)
                      ++||+|+||.||+|.+++   ++.||+|++.....   ..+++.+|++++++++||||++++|++.+...++||||+++|
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~~~~lvmE~~~~g   92 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG   92 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccCCEEEEEEcCCCC
Confidence            479999999999998643   46799999854322   246799999999999999999999999887889999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---------
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---------  188 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---------  188 (309)
                      +|.+++..  ...+++..+..++.|++.||.||   |+++++||||||+||+++.++.+|++|||+++...         
T Consensus        93 ~L~~~l~~--~~~l~~~~~~~i~~qi~~gl~yl---H~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~  167 (277)
T d1xbba_          93 PLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ  167 (277)
T ss_dssp             EHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC-
T ss_pred             cHHHHHhh--ccCCCHHHHHHHHHHHHHHHhhH---HhCCcccCCCcchhhcccccCcccccchhhhhhccccccccccc
Confidence            99999976  57799999999999999999999   67899999999999999999999999999987542         


Q ss_pred             -ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHH
Q 021659          189 -NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKEL  264 (309)
Q Consensus       189 -~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  264 (309)
                       ...+|+.|+|||...  ..+.++||||||+++|||+| |+.||.+.... +...... .+..     +..+...    .
T Consensus       168 ~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~-~~~~~i~-~~~~-----~~~p~~~----~  236 (277)
T d1xbba_         168 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-EVTAMLE-KGER-----MGCPAGC----P  236 (277)
T ss_dssp             ---CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-HHHHHHH-TTCC-----CCCCTTC----C
T ss_pred             cccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHH-HHHHHHH-cCCC-----CCCCccc----C
Confidence             125678899999643  34789999999999999998 89999865432 2111111 1111     1112222    2


Q ss_pred             HHHHHHHHHccCCCCCCCCChHHHHHHHhhh
Q 021659          265 KKLLAVARLCIKTKDKPTISIPQISRYLQNE  295 (309)
Q Consensus       265 ~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~  295 (309)
                      ..+.+++.+||+.||++|||+.+|++.|++.
T Consensus       237 ~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~  267 (277)
T d1xbba_         237 REMYDLMNLCWTYDVENRPGFAAVELRLRNY  267 (277)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHhHCcCHHHHHHHhhCH
Confidence            3455677799999999999999999988764

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-49  Score=343.52  Aligned_cols=232  Identities=18%  Similarity=0.259  Sum_probs=188.1

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccc-cccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQAL-NLEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~-~~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL~  120 (309)
                      +.||+|+||.||+|.. .+|+.||+|++... ....+.+.+|++++++++||||+++++++. +...|+||||+++|+|.
T Consensus        26 ~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~  105 (293)
T d1yhwa1          26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT  105 (293)
T ss_dssp             EECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHH
T ss_pred             EEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecCCCcHH
Confidence            5799999999999996 56899999998543 335677999999999999999999999765 47889999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccCCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYATM  193 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~~~  193 (309)
                      +++..   ..+++..+..++.|++.||.||   |++||+||||||+|||++.++.+||+|||++....       ...||
T Consensus       106 ~~~~~---~~l~~~~~~~i~~qi~~aL~yL---H~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt  179 (293)
T d1yhwa1         106 DVVTE---TCMDEGQIAAVCRECLQALEFL---HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGT  179 (293)
T ss_dssp             HHHHH---SCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSC
T ss_pred             HHhhc---cCCCHHHHHHHHHHHHHHHHHH---HHCCCcccCCcHHHeEECCCCcEeeccchhheeeccccccccccccC
Confidence            98874   5699999999999999999999   77899999999999999999999999999987542       33588


Q ss_pred             CCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHH
Q 021659          194 PHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVA  271 (309)
Q Consensus       194 ~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~  271 (309)
                      +.|+|||...+  ++.++|||||||++|+|++|+.||.+..............  ......+       ......+.+++
T Consensus       180 ~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~--~~~~~~~-------~~~s~~~~~li  250 (293)
T d1yhwa1         180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG--TPELQNP-------EKLSAIFRDFL  250 (293)
T ss_dssp             GGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHC--SCCCSSG-------GGSCHHHHHHH
T ss_pred             CCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCC--CCCCCCc-------ccCCHHHHHHH
Confidence            99999996543  4789999999999999999999998765443322211111  1111111       11123455666


Q ss_pred             HHccCCCCCCCCChHHHHH
Q 021659          272 RLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       272 ~~cl~~dp~~Rps~~evl~  290 (309)
                      .+||++||++|||+.|+++
T Consensus       251 ~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         251 NRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             HHHTCSSTTTSCCHHHHTT
T ss_pred             HHHccCChhHCcCHHHHhc
Confidence            6999999999999999985

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-49  Score=342.09  Aligned_cols=234  Identities=16%  Similarity=0.230  Sum_probs=187.1

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccc-cccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQAL-NLEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~-~~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL~  120 (309)
                      +.||+|+||.||+|+. .+++.||+|++... ....+.+.+|++++++++||||+++++++. +...++||||+++|+|.
T Consensus        18 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~~g~L~   97 (288)
T d2jfla1          18 GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVD   97 (288)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHH
T ss_pred             EEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCCCCcHH
Confidence            6799999999999997 46889999998543 334467899999999999999999999765 47888999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc-------cccCCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-------RNYATM  193 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-------~~~~~~  193 (309)
                      +++... ...+++..+..++.|++.||.||   |+++|+||||||+|||++.++.+||+|||++...       ....||
T Consensus        98 ~~~~~~-~~~l~e~~~~~i~~qi~~gL~yl---H~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~~Gt  173 (288)
T d2jfla1          98 AVMLEL-ERPLTESQIQVVCKQTLDALNYL---HDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGT  173 (288)
T ss_dssp             HHHHHH-TSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCCCSC
T ss_pred             HHHHhc-CCCCCHHHHHHHHHHHHHHHHHH---HHCCEEEeecChhheeECCCCCEEEEechhhhccCCCcccccccccc
Confidence            987542 46799999999999999999999   7789999999999999999999999999998643       245789


Q ss_pred             CCCCCCCCC-------CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          194 PHSSCPEDC-------STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       194 ~~~~~PE~~-------~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                      +.|+|||..       ..++.++|||||||++|+|+||+.||.+.............  ..+....+       ......
T Consensus       174 ~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~--~~~~~~~~-------~~~s~~  244 (288)
T d2jfla1         174 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS--EPPTLAQP-------SRWSSN  244 (288)
T ss_dssp             CTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHS--CCCCCSSG-------GGSCHH
T ss_pred             cccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC--CCCCCCcc-------ccCCHH
Confidence            999999963       22367899999999999999999999865433222211111  10111001       111234


Q ss_pred             HHHHHHHccCCCCCCCCChHHHHH
Q 021659          267 LLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      +.+++.+||++||++|||+.|+++
T Consensus       245 ~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         245 FKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHccCChhHCcCHHHHhc
Confidence            556666999999999999999986

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-49  Score=339.10  Aligned_cols=238  Identities=19%  Similarity=0.279  Sum_probs=194.6

Q ss_pred             cccccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           42 FHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      +.+.||+|+||.||+|+++++..||+|++.......+.|.+|+.++++++||||++++|++.+ ...++||||+++|+|.
T Consensus         8 ~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l~   87 (258)
T d1k2pa_           8 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL   87 (258)
T ss_dssp             CCCCCCEETTEEEEEEEETTTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTTEEHH
T ss_pred             EeEEEecCCCeEEEEEEECCCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCCCcHH
Confidence            447899999999999999888899999998777788899999999999999999999998875 6788999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc--------cCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN--------YAT  192 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~--------~~~  192 (309)
                      +++... ...+++..+..++.|+++||.||   |+++|+||||||+||+++.++.+||+|||+++....        ..+
T Consensus        88 ~~~~~~-~~~~~~~~~~~i~~qi~~gl~~L---H~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~  163 (258)
T d1k2pa_          88 NYLREM-RHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF  163 (258)
T ss_dssp             HHHHSG-GGCCCHHHHHHHHHHHHHHHHHH---HHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCCSCC
T ss_pred             Hhhhcc-ccCCcHHHHHHHHHHHHHHHHHH---hhcCcccccccceeEEEcCCCcEEECcchhheeccCCCceeecccCC
Confidence            997653 45688999999999999999999   778999999999999999999999999999864431        346


Q ss_pred             CCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHH
Q 021659          193 MPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLA  269 (309)
Q Consensus       193 ~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~  269 (309)
                      |+.|+|||...  .++.++||||||+++|||+| |+.||.+.... +....... +.  ....|   ...    ...+.+
T Consensus       164 t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~-~~~~~i~~-~~--~~~~p---~~~----~~~l~~  232 (258)
T d1k2pa_         164 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-ETAEHIAQ-GL--RLYRP---HLA----SEKVYT  232 (258)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHH-HHHHHHHT-TC--CCCCC---TTC----CHHHHH
T ss_pred             CCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHH-HHHHHHHh-CC--CCCCc---ccc----cHHHHH
Confidence            67899999743  45788999999999999998 79999865432 22221111 11  11111   111    245666


Q ss_pred             HHHHccCCCCCCCCChHHHHHHHhh
Q 021659          270 VARLCIKTKDKPTISIPQISRYLQN  294 (309)
Q Consensus       270 l~~~cl~~dp~~Rps~~evl~~L~~  294 (309)
                      ++.+||+.||++|||+.++++.|.+
T Consensus       233 li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         233 IMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             HHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             HHHHHccCCHhHCcCHHHHHHHhhC
Confidence            7779999999999999999999863

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-49  Score=342.54  Aligned_cols=237  Identities=14%  Similarity=0.177  Sum_probs=189.5

Q ss_pred             ccccCCCceEEEEEEc---CCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCCCCH
Q 021659           45 IVYTNSHGAAYKARFQ---DGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIENGSL  119 (309)
Q Consensus        45 ~lg~G~~~~v~~~~~~---~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~~sL  119 (309)
                      .||+|+||.||+|.+.   ++..||+|++....  ...++|.+|++++++++||||++++|++.++..|+||||+++|+|
T Consensus        16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~lvmE~~~~g~L   95 (285)
T d1u59a_          16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPL   95 (285)
T ss_dssp             EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTEEH
T ss_pred             EEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccCeEEEEEEeCCCCcH
Confidence            4999999999999863   35579999985432  234679999999999999999999999988888999999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc----------c
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----------N  189 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----------~  189 (309)
                      .+++... ...+++..+..++.|++.||.||   |+++++||||||+||+++.++.+||+|||+++...          .
T Consensus        96 ~~~l~~~-~~~l~~~~~~~i~~qi~~gL~yl---H~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~  171 (285)
T d1u59a_          96 HKFLVGK-REEIPVSNVAELLHQVSMGMKYL---EEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA  171 (285)
T ss_dssp             HHHHTTC-TTTSCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCS
T ss_pred             HHHhhcc-ccCCCHHHHHHHHHHHHHHHHHH---HhCCeecCcCchhheeeccCCceeeccchhhhcccccccccccccc
Confidence            9987542 46799999999999999999999   77899999999999999999999999999987543          2


Q ss_pred             cCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          190 YATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       190 ~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                      ..+|+.|+|||...  ..+.++|||||||++|||+| |+.||.+.... +..... ..+..     +..+...    ..+
T Consensus       172 ~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~-~~~~~i-~~~~~-----~~~p~~~----~~~  240 (285)
T d1u59a_         172 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-EVMAFI-EQGKR-----MECPPEC----PPE  240 (285)
T ss_dssp             SCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH-HHHHHH-HTTCC-----CCCCTTC----CHH
T ss_pred             cccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHH-HHHHHH-HcCCC-----CCCCCcC----CHH
Confidence            24667899999643  34788999999999999998 89999865432 111111 11111     1122222    234


Q ss_pred             HHHHHHHccCCCCCCCCChHHHHHHHhhhh
Q 021659          267 LLAVARLCIKTKDKPTISIPQISRYLQNEV  296 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rps~~evl~~L~~~~  296 (309)
                      +.+++.+||+.||++|||+.+|++.|+...
T Consensus       241 l~~li~~cl~~~p~~RPs~~~i~~~L~~~~  270 (285)
T d1u59a_         241 LYALMSDCWIYKWEDRPDFLTVEQRMRACY  270 (285)
T ss_dssp             HHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            556777999999999999999999987544

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.7e-48  Score=342.48  Aligned_cols=236  Identities=16%  Similarity=0.195  Sum_probs=177.3

Q ss_pred             cccccccCCCceEEEEEEc-CCcEEEEEEecccc--ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           42 FHRIVYTNSHGAAYKARFQ-DGEVALVKEIQALN--LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.+.||+|+||+||+|+.. +++.||+|++....  ...+.+.+|++++++++||||+++++++.+ ...|+||||+++|
T Consensus        13 ~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~~gg   92 (307)
T d1a06a_          13 FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGG   92 (307)
T ss_dssp             EEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             EEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCC
Confidence            4478999999999999974 58999999985433  223567899999999999999999997765 7788999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeC---CCCceeEeccccccccc------
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLD---ENFTAKLSDVGFFNSVR------  188 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~---~~~~~kl~dfg~~~~~~------  188 (309)
                      +|.+++..  ...+++..+..++.|++.||.||   |+++++||||||+||++.   .++.+||+|||++....      
T Consensus        93 ~L~~~l~~--~~~l~e~~~~~~~~qi~~al~yl---H~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~  167 (307)
T d1a06a_          93 ELFDRIVE--KGFYTERDASRLIFQVLDAVKYL---HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS  167 (307)
T ss_dssp             BHHHHHHT--CSCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEESSSSTTCCEEECCC-------------
T ss_pred             cHHHhhhc--ccCCCHHHHHHHHHHHHHHHHhh---hhceeeeEEecccceeecccCCCceEEEeccceeEEccCCCeee
Confidence            99999986  57899999999999999999999   778999999999999995   46889999999986442      


Q ss_pred             ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHH
Q 021659          189 NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKK  266 (309)
Q Consensus       189 ~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (309)
                      ...||+.|+|||...  .+++++|||||||++|+|++|+.||.+.................    .+......    ...
T Consensus       168 ~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~----~~~~~~~~----s~~  239 (307)
T d1a06a_         168 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF----DSPYWDDI----SDS  239 (307)
T ss_dssp             -----CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCC----CTTTTTTS----CHH
T ss_pred             eeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCC----CCccccCC----CHH
Confidence            346899999999643  35789999999999999999999998764433222211111111    01111111    234


Q ss_pred             HHHHHHHccCCCCCCCCChHHHHH
Q 021659          267 LLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       267 l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      +.+++.+||++||++|||+.|+++
T Consensus       240 ~~~li~~~L~~dP~~R~s~~eil~  263 (307)
T d1a06a_         240 AKDFIRHLMEKDPEKRFTCEQALQ  263 (307)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHccCCHhHCcCHHHHhc
Confidence            566677999999999999999987

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.4e-48  Score=343.10  Aligned_cols=232  Identities=19%  Similarity=0.234  Sum_probs=186.9

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccccc----HHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLE----KDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~----~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||+|+. .+++.||+|++......    .+.+.+|++++++++||||+++++++. +...|+||||+++|
T Consensus        21 ~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g  100 (309)
T d1u5ra_          21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGS  100 (309)
T ss_dssp             EEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred             EEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEEecCCC
Confidence            5799999999999997 46889999998644322    246889999999999999999999775 47889999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---ccCCCC
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---NYATMP  194 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---~~~~~~  194 (309)
                      +|..++..  ...+++..+..++.|++.||.||   |+++|+||||||+|||++.++.+||+|||++....   ...||+
T Consensus       101 ~l~~~~~~--~~~l~e~~~~~i~~qi~~aL~yL---H~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~GT~  175 (309)
T d1u5ra_         101 ASDLLEVH--KKPLQEVEIAAVTHGALQGLAYL---HSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTP  175 (309)
T ss_dssp             HHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCSCG
T ss_pred             chHHHHHh--CCCCCHHHHHHHHHHHHHHHHHH---HhCCEeccCCCcceEEECCCCCEEEeecccccccCCCCccccCc
Confidence            99877665  57799999999999999999999   77899999999999999999999999999987543   457899


Q ss_pred             CCCCCCCCC-----CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHH
Q 021659          195 HSSCPEDCS-----TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLA  269 (309)
Q Consensus       195 ~~~~PE~~~-----~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~  269 (309)
                      .|+|||...     .++.++|||||||++|+|++|+.||.+............  ...     +.+.....+   ..+.+
T Consensus       176 ~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~--~~~-----~~~~~~~~s---~~~~~  245 (309)
T d1u5ra_         176 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ--NES-----PALQSGHWS---EYFRN  245 (309)
T ss_dssp             GGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH--SCC-----CCCSCTTSC---HHHHH
T ss_pred             cccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHh--CCC-----CCCCCCCCC---HHHHH
Confidence            999999643     246789999999999999999999986654333222111  111     111111122   34555


Q ss_pred             HHHHccCCCCCCCCChHHHHH
Q 021659          270 VARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       270 l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ++.+||++||++|||+.|+++
T Consensus       246 li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         246 FVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             HHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHCcCChhHCcCHHHHHh
Confidence            666999999999999999975

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-48  Score=338.91  Aligned_cols=243  Identities=15%  Similarity=0.273  Sum_probs=188.3

Q ss_pred             ccccccCCCceEEEEEEcCC-----cEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeC
Q 021659           43 HRIVYTNSHGAAYKARFQDG-----EVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNI  114 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~~-----~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~  114 (309)
                      .++||+|+||.||+|.+..+     ..||+|.+.....  ...+|.+|++++++++||||++++|++.+ ...++||||+
T Consensus        12 ~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~e~~   91 (283)
T d1mqba_          12 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYM   91 (283)
T ss_dssp             EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             eeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEEEec
Confidence            36899999999999997532     4699999854332  23568999999999999999999998865 6778999999


Q ss_pred             CCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-----
Q 021659          115 ENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-----  189 (309)
Q Consensus       115 ~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-----  189 (309)
                      .++++.+.+... ...+++..+..++.|++.||.||   |+++|+||||||+|||++.++.+||+|||+++....     
T Consensus        92 ~~~~l~~~~~~~-~~~~~~~~~~~i~~~i~~gl~~l---H~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~  167 (283)
T d1mqba_          92 ENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAT  167 (283)
T ss_dssp             TTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------
T ss_pred             ccCcchhhhhcc-cccccHHHHHHHHHHHHHhhhhc---cccccccCccccceEEECCCCeEEEcccchhhcccCCCccc
Confidence            999999887642 46799999999999999999999   778999999999999999999999999999975421     


Q ss_pred             -----cCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHH
Q 021659          190 -----YATMPHSSCPEDC--STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSK  262 (309)
Q Consensus       190 -----~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  262 (309)
                           ..+|+.|+|||..  ...+.++||||||+++|||+++..|+.......+.........      .+..+..    
T Consensus       168 ~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~------~~~~~~~----  237 (283)
T d1mqba_         168 YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGF------RLPTPMD----  237 (283)
T ss_dssp             ------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC------CCCCCTT----
T ss_pred             eEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccC------CCCCchh----
Confidence                 2457789999964  3357889999999999999997766654444433332221111      1111111    


Q ss_pred             HHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccc
Q 021659          263 ELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQ  299 (309)
Q Consensus       263 ~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~  299 (309)
                      ....+.+++.+||+.||++|||+.||++.|+.+.+..
T Consensus       238 ~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~p  274 (283)
T d1mqba_         238 CPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP  274 (283)
T ss_dssp             CBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred             hHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhCc
Confidence            2345667777999999999999999999999877653

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-48  Score=343.88  Aligned_cols=189  Identities=19%  Similarity=0.277  Sum_probs=162.4

Q ss_pred             cccc--cccccCCCceEEEEEE-cCCcEEEEEEeccc--cccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEee
Q 021659           40 DGFH--RIVYTNSHGAAYKARF-QDGEVALVKEIQAL--NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        40 ~~~~--~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~--~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      ++|+  +.||+|+||+||+|.. .+|+.||+|++...  ....+.+.+|+.+|++++||||+++++++.+ .+.|+||||
T Consensus         6 d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy   85 (322)
T d1s9ja_           6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH   85 (322)
T ss_dssp             GGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             cCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            3454  6899999999999997 46899999998543  2335678999999999999999999997765 778899999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc-----c
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV-----R  188 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~-----~  188 (309)
                      +++|+|.+++..  ...+++..+..++.|++.||.|||+  .++|+||||||+|||++.++.+||+|||+|...     .
T Consensus        86 ~~gg~L~~~l~~--~~~l~~~~~~~~~~qil~aL~yLH~--~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~  161 (322)
T d1s9ja_          86 MDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN  161 (322)
T ss_dssp             CTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHH--HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC-
T ss_pred             CCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHH--hCCEEccccCHHHeeECCCCCEEEeeCCCccccCCCccc
Confidence            999999999976  5679999999999999999999952  348999999999999999999999999998743     3


Q ss_pred             ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCc
Q 021659          189 NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDV  232 (309)
Q Consensus       189 ~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~  232 (309)
                      ...||+.|+|||...  .+++++|||||||++|||++|+.||.+..
T Consensus       162 ~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~  207 (322)
T d1s9ja_         162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD  207 (322)
T ss_dssp             --CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCC
T ss_pred             cccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence            457899999999643  45889999999999999999999997643

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.6e-49  Score=341.55  Aligned_cols=231  Identities=17%  Similarity=0.222  Sum_probs=187.8

Q ss_pred             cccccccCCCceEEEEEE-cCCcEEEEEEeccc----cccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCC
Q 021659           42 FHRIVYTNSHGAAYKARF-QDGEVALVKEIQAL----NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIE  115 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~----~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~  115 (309)
                      +.+.||+|+||.||+|+. .+++.||+|++...    ....+.+.+|++++++++||||+++++++.+ ...|+||||++
T Consensus        12 i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~   91 (288)
T d1uu3a_          12 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAK   91 (288)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEECCCT
T ss_pred             EEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEEEccC
Confidence            346899999999999997 46899999998532    3345678999999999999999999997765 67889999999


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------  188 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------  188 (309)
                      +|+|.+++..  .+.+++..+..++.|++.||.||   |+.+|+||||||+||+++.++.+||+|||+++...       
T Consensus        92 gg~L~~~~~~--~~~l~e~~~~~~~~qi~~al~yl---H~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~  166 (288)
T d1uu3a_          92 NGELLKYIRK--IGSFDETCTRFYTAEIVSALEYL---HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR  166 (288)
T ss_dssp             TEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred             CCCHHHhhhc--cCCCCHHHHHHHHHHHHHHHHhh---ccccEEcCcCCccccccCCCceEEecccccceecccCCcccc
Confidence            9999999876  57899999999999999999999   77899999999999999999999999999997543       


Q ss_pred             --ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHH
Q 021659          189 --NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKEL  264 (309)
Q Consensus       189 --~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  264 (309)
                        ...||+.|+|||...  .++.++|||||||++|+|++|+.||.+..............        ..++...+    
T Consensus       167 ~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~--------~~~p~~~s----  234 (288)
T d1uu3a_         167 ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE--------YDFPEKFF----  234 (288)
T ss_dssp             ---CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTC--------CCCCTTCC----
T ss_pred             cccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCC--------CCCCccCC----
Confidence              235899999999753  35788999999999999999999998654332221111111        11122222    


Q ss_pred             HHHHHHHHHccCCCCCCCCChHHHH
Q 021659          265 KKLLAVARLCIKTKDKPTISIPQIS  289 (309)
Q Consensus       265 ~~l~~l~~~cl~~dp~~Rps~~evl  289 (309)
                      ..+.+++.+||++||++|||+.|++
T Consensus       235 ~~~~~li~~~L~~dP~~R~t~~e~~  259 (288)
T d1uu3a_         235 PKARDLVEKLLVLDATKRLGCEEME  259 (288)
T ss_dssp             HHHHHHHHTTSCSSGGGSTTSGGGT
T ss_pred             HHHHHHHHHHccCCHhHCcCHHHHc
Confidence            3455666699999999999999864

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.8e-49  Score=338.45  Aligned_cols=236  Identities=20%  Similarity=0.242  Sum_probs=178.2

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccccc---HHHHHHHHHHHccCCCCCcceEeeeEeC---CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLE---KDAFYREIQLLGRLHHRHLLALQGFSTG---RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~h~niv~~~~~~~~---~~~~lv~e~~~~  116 (309)
                      +.||+|+||.||+|+. .+|+.||+|.+......   .+.+.+|++++++++||||+++++++.+   ...|+||||+++
T Consensus        10 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivmEy~~~   89 (269)
T d2java1          10 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEG   89 (269)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEEEECCTT
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEEecCCC
Confidence            6899999999999997 46889999998654333   3568899999999999999999997743   457899999999


Q ss_pred             CCHHHhhcCC--CCCCCCHHHHHHHHHHHHHHHhhhhhcC--CCCeeecccCCCceeeCCCCceeEeccccccccc----
Q 021659          117 GSLKEHLNDP--LKTPLDWKTRLQIAIGVAAALEYLLLFS--NLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----  188 (309)
Q Consensus       117 ~sL~~~i~~~--~~~~l~~~~~~~i~~~i~~~l~~lh~~h--~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----  188 (309)
                      |+|.+++...  ....+++..++.++.|++.||.|||+..  ..+|+||||||+|||++.++.+||+|||+++...    
T Consensus        90 g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~  169 (269)
T d2java1          90 GDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS  169 (269)
T ss_dssp             EEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC-----
T ss_pred             CcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeecccCCC
Confidence            9999998532  2467999999999999999999996532  3469999999999999999999999999986542    


Q ss_pred             ---ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHH
Q 021659          189 ---NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKE  263 (309)
Q Consensus       189 ---~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  263 (309)
                         ...+|+.|+|||...  .++.++|||||||++|||+||+.||.+.... +.... ...+..     +.++...+   
T Consensus       170 ~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~-~~~~~-i~~~~~-----~~~~~~~s---  239 (269)
T d2java1         170 FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK-ELAGK-IREGKF-----RRIPYRYS---  239 (269)
T ss_dssp             ------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHH-HHHTCC-----CCCCTTSC---
T ss_pred             ccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHH-HHHHH-HHcCCC-----CCCCcccC---
Confidence               346889999999643  3578999999999999999999999865332 21111 111111     11222222   


Q ss_pred             HHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          264 LKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       264 ~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                       .++.+++.+||+.||++|||+.|+++
T Consensus       240 -~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         240 -DELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             -HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -HHHHHHHHHHcCCChhHCcCHHHHHh
Confidence             34556666999999999999999975

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=2.2e-47  Score=341.16  Aligned_cols=235  Identities=16%  Similarity=0.218  Sum_probs=188.4

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc-ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN-LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~-~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      +.||+|+||.||+|.. .+|+.||+|++.... .+.+.+.+|+++|++|+||||+++++++.+ ...|+||||+++|+|.
T Consensus        35 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~  114 (352)
T d1koba_          35 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELF  114 (352)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHH
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCChHH
Confidence            6899999999999997 468999999986443 334578899999999999999999997765 7788999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeC--CCCceeEeccccccccc------ccCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLD--ENFTAKLSDVGFFNSVR------NYAT  192 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~--~~~~~kl~dfg~~~~~~------~~~~  192 (309)
                      +++... ...+++..+..++.|++.||.||   |++||+||||||+|||++  .++.+||+|||++....      ...+
T Consensus       115 ~~~~~~-~~~l~e~~~~~i~~qi~~aL~yl---H~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~~~~~g  190 (352)
T d1koba_         115 DRIAAE-DYKMSEAEVINYMRQACEGLKHM---HEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTA  190 (352)
T ss_dssp             HHTTCT-TCCBCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECS
T ss_pred             HHHHhc-CCCCCHHHHHHHHHHHHHHHHHH---HHCCeeecccccccccccccCCCeEEEeecccceecCCCCceeeccC
Confidence            887652 45799999999999999999999   778999999999999997  56899999999997653      2468


Q ss_pred             CCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          193 MPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       193 ~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      |+.|+|||...+  +++++|||||||++|+|+||+.||.+.................+    +......    ...+.++
T Consensus       191 t~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~----s~~~~~l  262 (352)
T d1koba_         191 TAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFD----EDAFSSV----SPEAKDF  262 (352)
T ss_dssp             SGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCC----SSTTTTS----CHHHHHH
T ss_pred             cccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----cccccCC----CHHHHHH
Confidence            899999997443  57889999999999999999999987654332222111111111    1111111    2345566


Q ss_pred             HHHccCCCCCCCCChHHHHH
Q 021659          271 ARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       271 ~~~cl~~dp~~Rps~~evl~  290 (309)
                      +.+||+.||++|||+.|+++
T Consensus       263 i~~~L~~dp~~R~s~~eil~  282 (352)
T d1koba_         263 IKNLLQKEPRKRLTVHDALE  282 (352)
T ss_dssp             HHTTSCSSGGGSCCHHHHHT
T ss_pred             HHHHccCChhHCcCHHHHhc
Confidence            77999999999999999986

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=1.8e-47  Score=341.47  Aligned_cols=237  Identities=17%  Similarity=0.191  Sum_probs=188.3

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEecccc-ccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCH
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQALN-LEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSL  119 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~-~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL  119 (309)
                      .+.||+|+||.||+|+. .+|+.||+|++.... ...+.+.+|+++|++++||||+++++++. +...|+||||+++|+|
T Consensus        31 ~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L  110 (350)
T d1koaa2          31 HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL  110 (350)
T ss_dssp             EEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCCCSCBH
T ss_pred             EEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCCH
Confidence            36899999999999997 468999999995433 33467899999999999999999999765 4788999999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC--CCceeEeccccccccc------ccC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE--NFTAKLSDVGFFNSVR------NYA  191 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~--~~~~kl~dfg~~~~~~------~~~  191 (309)
                      .+++... ...+++..+..++.|++.||.||   |+++++||||||+|||++.  ++.+||+|||++....      ...
T Consensus       111 ~~~l~~~-~~~l~e~~~~~i~~qi~~aL~yl---H~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~  186 (350)
T d1koaa2         111 FEKVADE-HNKMSEDEAVEYMRQVCKGLCHM---HENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT  186 (350)
T ss_dssp             HHHHTCT-TSCBCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEEEEC
T ss_pred             HHHHHhh-cCCCCHHHHHHHHHHHHHHHHHH---HhcCCeeeeechhHeeeccCCCCeEEEeecchheecccccccceec
Confidence            9998642 45699999999999999999999   7789999999999999964  5789999999987554      247


Q ss_pred             CCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHH
Q 021659          192 TMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLA  269 (309)
Q Consensus       192 ~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~  269 (309)
                      +|+.|+|||...+  ++.++|||||||++|+|++|+.||.+......................+.+        ...+.+
T Consensus       187 gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~--------s~~~~~  258 (350)
T d1koaa2         187 GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGI--------SEDGKD  258 (350)
T ss_dssp             SCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGC--------CHHHHH
T ss_pred             CcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCC--------CHHHHH
Confidence            8999999997543  477899999999999999999999865433222111111111111111111        234556


Q ss_pred             HHHHccCCCCCCCCChHHHHHH
Q 021659          270 VARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       270 l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      ++.+||++||++|||+.|+++.
T Consensus       259 li~~~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         259 FIRKLLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             HHHHHCCSSGGGSCCHHHHHHS
T ss_pred             HHHHHccCChhHCcCHHHHhcC
Confidence            6779999999999999999874

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-47  Score=332.32  Aligned_cols=235  Identities=17%  Similarity=0.241  Sum_probs=187.9

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEecccc-------ccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEee
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQALN-------LEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~-------~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      .+.||+|+||+||+|+. .+|+.||+|++....       ...+.+.+|+++|++++||||+++++++.+ ...|+||||
T Consensus        15 ~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~   94 (293)
T d1jksa_          15 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL   94 (293)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             eEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            36899999999999997 468999999985322       235679999999999999999999997765 678899999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCC----ceeEeccccccccc-
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENF----TAKLSDVGFFNSVR-  188 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~----~~kl~dfg~~~~~~-  188 (309)
                      +++|+|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++    .+|++|||++.... 
T Consensus        95 ~~gg~L~~~i~~--~~~l~~~~~~~~~~qi~~al~yL---H~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~  169 (293)
T d1jksa_          95 VAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYL---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF  169 (293)
T ss_dssp             CCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTT
T ss_pred             CCCccccchhcc--ccccchhHHHHHHHHHHHHHHhh---hhcceeecccccceEEEecCCCcccceEecchhhhhhcCC
Confidence            999999999976  46799999999999999999999   778999999999999998776    49999999986543 


Q ss_pred             -----ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCH
Q 021659          189 -----NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDS  261 (309)
Q Consensus       189 -----~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  261 (309)
                           ...+|+.|+|||...  ..+.++|||||||++|+|++|+.||.+......................+.+      
T Consensus       170 ~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~------  243 (293)
T d1jksa_         170 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT------  243 (293)
T ss_dssp             SCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTS------
T ss_pred             CccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCCC------
Confidence                 346778999999653  3578999999999999999999999876443322221111111111111111      


Q ss_pred             HHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          262 KELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       262 ~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                        ...+.+++.+||+.||++|||+.|+++
T Consensus       244 --s~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         244 --SALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             --CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             --CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence              234556777999999999999999986

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-48  Score=342.62  Aligned_cols=240  Identities=17%  Similarity=0.252  Sum_probs=184.8

Q ss_pred             cccccccCCCceEEEEEEcC-C-----cEEEEEEeccc--cccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEE
Q 021659           42 FHRIVYTNSHGAAYKARFQD-G-----EVALVKEIQAL--NLEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVF  111 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~-~-----~~va~K~~~~~--~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~  111 (309)
                      +.+.||+|+||+||+|++.. +     ..||+|.+...  ......+.+|+.++.++ +||||+++++++.+ ...++||
T Consensus        41 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~  120 (325)
T d1rjba_          41 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIF  120 (325)
T ss_dssp             EEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             EeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeEEEEE
Confidence            34689999999999999643 2     36899988432  33346789999999998 89999999998865 6789999


Q ss_pred             eeCCCCCHHHhhcCCC---------------------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceee
Q 021659          112 DNIENGSLKEHLNDPL---------------------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIML  170 (309)
Q Consensus       112 e~~~~~sL~~~i~~~~---------------------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill  170 (309)
                      ||+++|+|.+++....                     ...+++..++.++.|+++||.||   |+++|+||||||+||++
T Consensus       121 Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yL---H~~~IiHRDlKp~Nill  197 (325)
T d1rjba_         121 EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFL---EFKSCVHRDLAARNVLV  197 (325)
T ss_dssp             ECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHH---HHTTEEETTCSGGGEEE
T ss_pred             EcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHH---HhCCeeeccCchhcccc
Confidence            9999999999996531                     23589999999999999999999   77899999999999999


Q ss_pred             CCCCceeEecccccccccc---------cCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHH
Q 021659          171 DENFTAKLSDVGFFNSVRN---------YATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWI  238 (309)
Q Consensus       171 ~~~~~~kl~dfg~~~~~~~---------~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~  238 (309)
                      +.++.+||+|||+++....         ..+|+.|+|||..  ..+++++|||||||++|||+| |+.||.+........
T Consensus       198 ~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~  277 (325)
T d1rjba_         198 THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFY  277 (325)
T ss_dssp             ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHH
T ss_pred             ccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            9999999999999865432         2357889999964  345788999999999999997 899997643322221


Q ss_pred             HHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhh
Q 021659          239 QESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQN  294 (309)
Q Consensus       239 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~  294 (309)
                      .... .+.     .+..+...    ...+.+++.+||+.||++|||+.||++.|.-
T Consensus       278 ~~~~-~~~-----~~~~p~~~----~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  323 (325)
T d1rjba_         278 KLIQ-NGF-----KMDQPFYA----TEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC  323 (325)
T ss_dssp             HHHH-TTC-----CCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHh-cCC-----CCCCCCcC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHhC
Confidence            1111 110     11111112    2355667779999999999999999999863

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=1e-46  Score=326.41  Aligned_cols=235  Identities=17%  Similarity=0.209  Sum_probs=187.6

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEecccccc----------HHHHHHHHHHHccCC-CCCcceEeeeEeC-CeeEE
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQALNLE----------KDAFYREIQLLGRLH-HRHLLALQGFSTG-RKRLL  109 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~----------~~~~~~ei~~l~~l~-h~niv~~~~~~~~-~~~~l  109 (309)
                      .+.||+|+||+||+|+. .+++.||+|++......          .+.+.+|+.++++++ ||||+++++++.+ ...|+
T Consensus         8 ~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~i   87 (277)
T d1phka_           8 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFL   87 (277)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             ceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCcceEE
Confidence            36899999999999997 56899999998543221          235789999999997 9999999997765 78899


Q ss_pred             EEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-
Q 021659          110 VFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-  188 (309)
Q Consensus       110 v~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-  188 (309)
                      ||||+++|+|.+++..  ...+++..+..++.|++.||+||   |+++++||||||+||+++.++.+||+|||++.... 
T Consensus        88 vmE~~~~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~~l---H~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~  162 (277)
T d1phka_          88 VFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICAL---HKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP  162 (277)
T ss_dssp             EEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred             EEEcCCCchHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH---HHcCCcccccccceEEEcCCCCeEEccchheeEccC
Confidence            9999999999999976  56899999999999999999999   77899999999999999999999999999997543 


Q ss_pred             -----ccCCCCCCCCCCCCC--------CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcC
Q 021659          189 -----NYATMPHSSCPEDCS--------TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDL  255 (309)
Q Consensus       189 -----~~~~~~~~~~PE~~~--------~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l  255 (309)
                           ...+|+.|.+||...        ..+.++||||+||++|+|++|+.||.+................        .
T Consensus       163 ~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~--------~  234 (277)
T d1phka_         163 GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ--------F  234 (277)
T ss_dssp             TCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--------C
T ss_pred             CCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCC--------C
Confidence                 245788999999532        2367899999999999999999999876543322111111111        1


Q ss_pred             CCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          256 GGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       256 ~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ..........++.+++.+||++||++|||+.|+++
T Consensus       235 ~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         235 GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             CCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            11111112345666777999999999999999975

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=7.4e-47  Score=327.82  Aligned_cols=241  Identities=17%  Similarity=0.185  Sum_probs=188.3

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEeccccc----cHHHHHHHHHHHccCCCCCcceEeeeEeC-----CeeEEEEe
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQALNL----EKDAFYREIQLLGRLHHRHLLALQGFSTG-----RKRLLVFD  112 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~----~~~~~~~ei~~l~~l~h~niv~~~~~~~~-----~~~~lv~e  112 (309)
                      .+.||+|+||.||+|.. .+++.||+|++.....    ..+.+.+|++++++++||||+++++++..     ...|+|||
T Consensus        12 ~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~lvmE   91 (277)
T d1o6ya_          12 GEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME   91 (277)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred             eEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEEEEEE
Confidence            36899999999999997 5689999999954332    23468999999999999999999997642     23679999


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc----
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----  188 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----  188 (309)
                      |+++++|.+++..  ...+++.++..++.|++.||.||   |+.+++||||||+||+++.++.++++|||.+....    
T Consensus        92 ~~~g~~L~~~~~~--~~~l~~~~~~~i~~qi~~al~~l---H~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~  166 (277)
T d1o6ya_          92 YVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFS---HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN  166 (277)
T ss_dssp             CCCEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC----
T ss_pred             CCCCCEehhhhcc--cCCCCHHHHHHHHHHHHHHHHHH---HhCCccCccccCcccccCccccceeehhhhhhhhccccc
Confidence            9999999999876  56899999999999999999999   77899999999999999999999999999875332    


Q ss_pred             ------ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCC
Q 021659          189 ------NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYD  260 (309)
Q Consensus       189 ------~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  260 (309)
                            ...||+.|+|||...+  .++++|||||||++|+|+||+.||.+.................+....+.+     
T Consensus       167 ~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  241 (277)
T d1o6ya_         167 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGL-----  241 (277)
T ss_dssp             ------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSSC-----
T ss_pred             cccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhccCC-----
Confidence                  2368899999997543  478899999999999999999999876544333222222111111111221     


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCC-ChHHHHHHHhhhh
Q 021659          261 SKELKKLLAVARLCIKTKDKPTI-SIPQISRYLQNEV  296 (309)
Q Consensus       261 ~~~~~~l~~l~~~cl~~dp~~Rp-s~~evl~~L~~~~  296 (309)
                         ...+.+++.+||++||++|| |++++++.|.+..
T Consensus       242 ---s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         242 ---SADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             ---CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             ---CHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence               24555667799999999999 8999999988654

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.6e-46  Score=331.11  Aligned_cols=231  Identities=20%  Similarity=0.256  Sum_probs=188.4

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEeccc----cccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQAL----NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~----~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      .+.||+|+||.||+|+. .+|+.||+|++...    ....+.+.+|+.++++++||||+++++++.+ ...|+||||+++
T Consensus         9 ~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~g   88 (316)
T d1fota_           9 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEG   88 (316)
T ss_dssp             EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             EEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEeeecCC
Confidence            36899999999999997 46899999998532    2345678999999999999999999997765 788899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc----ccCC
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----NYAT  192 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----~~~~  192 (309)
                      |+|..++..  ...+++..+..++.|++.||.||   |+++|+||||||+|||++.++.+||+|||++....    ...|
T Consensus        89 g~l~~~~~~--~~~~~~~~~~~~~~qi~~al~~l---H~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~G  163 (316)
T d1fota_          89 GELFSLLRK--SQRFPNPVAKFYAAEVCLALEYL---HSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCG  163 (316)
T ss_dssp             CBHHHHHHH--TSSCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCS
T ss_pred             ccccccccc--cccccccHHHHHHHHHHHhhhhh---ccCcEEccccCchheeEcCCCCEEEecCccceEeccccccccC
Confidence            999999987  67788999999999999999999   88899999999999999999999999999997654    3468


Q ss_pred             CCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          193 MPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       193 ~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      |+.|+|||...+  ++.++|||||||++|+|++|+.||.+..............        ...+...+    .++.++
T Consensus       164 t~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~--------~~~p~~~s----~~~~~l  231 (316)
T d1fota_         164 TPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAE--------LRFPPFFN----EDVKDL  231 (316)
T ss_dssp             CTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCC--------CCCCTTSC----HHHHHH
T ss_pred             cccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCC--------CCCCCCCC----HHHHHH
Confidence            999999997543  5789999999999999999999998754332221111111        11111112    345566


Q ss_pred             HHHccCCCCCCCC-----ChHHHHH
Q 021659          271 ARLCIKTKDKPTI-----SIPQISR  290 (309)
Q Consensus       271 ~~~cl~~dp~~Rp-----s~~evl~  290 (309)
                      +.+||.+||.+|+     |+.++++
T Consensus       232 i~~~L~~dp~~R~~~~r~t~~~il~  256 (316)
T d1fota_         232 LSRLITRDLSQRLGNLQNGTEDVKN  256 (316)
T ss_dssp             HHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             HHHHhhhCHHhccccchhhHHHHHc
Confidence            6699999999996     8999885

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.9e-48  Score=330.15  Aligned_cols=239  Identities=18%  Similarity=0.250  Sum_probs=185.3

Q ss_pred             cccccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC--CeeEEEEeeCCCCCH
Q 021659           42 FHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG--RKRLLVFDNIENGSL  119 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~--~~~~lv~e~~~~~sL  119 (309)
                      +.+.||+|+||.||+|.++ |..||+|+++.. ...+.+.+|++++++++||||++++|++.+  ...++||||+++|+|
T Consensus        11 ~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L   88 (262)
T d1byga_          11 LLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND-ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL   88 (262)
T ss_dssp             EEEEEEECSSCEEEEEEET-TEEEEEEECCCC-C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEH
T ss_pred             EeEEEecCCCeEEEEEEEC-CeEEEEEEECcH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccCCCCH
Confidence            3468999999999999984 778999999654 356789999999999999999999998753  457899999999999


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc----ccCCCCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----NYATMPH  195 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----~~~~~~~  195 (309)
                      .+++.......+++..+..++.|++.||.||   |+++++||||||+||+++.++.+|++|||+++...    ...++..
T Consensus        89 ~~~l~~~~~~~l~~~~~~~i~~~i~~al~yl---H~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~~~~~  165 (262)
T d1byga_          89 VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL---EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK  165 (262)
T ss_dssp             HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECTTSCEEECCCCC------------CCTT
T ss_pred             HHHHHhcCCCCCCHHHHHHHHHHHHhhcccc---ccCceeccccchHhheecCCCCEeecccccceecCCCCcccccccc
Confidence            9999653345689999999999999999999   77899999999999999999999999999987543    2356778


Q ss_pred             CCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHH
Q 021659          196 SSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVAR  272 (309)
Q Consensus       196 ~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~  272 (309)
                      |+|||..  ...++++||||||+++|||+| |+.||...... +....... +.     .+..+...+    ..+.+++.
T Consensus       166 y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~-~~~~~i~~-~~-----~~~~~~~~~----~~~~~li~  234 (262)
T d1byga_         166 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-DVVPRVEK-GY-----KMDAPDGCP----PAVYEVMK  234 (262)
T ss_dssp             TSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG-GHHHHHTT-TC-----CCCCCTTCC----HHHHHHHH
T ss_pred             CCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHH-HHHHHHHc-CC-----CCCCCccCC----HHHHHHHH
Confidence            9999964  345789999999999999998 67777654321 11211111 11     122222222    34556677


Q ss_pred             HccCCCCCCCCChHHHHHHHhhhh
Q 021659          273 LCIKTKDKPTISIPQISRYLQNEV  296 (309)
Q Consensus       273 ~cl~~dp~~Rps~~evl~~L~~~~  296 (309)
                      +||+.||++|||+.++++.|+++.
T Consensus       235 ~cl~~dP~~Rps~~~l~~~L~~i~  258 (262)
T d1byga_         235 NCWHLDAAMRPSFLQLREQLEHIK  258 (262)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHcccCHhHCcCHHHHHHHHHHHH
Confidence            999999999999999999998754

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.6e-47  Score=331.59  Aligned_cols=252  Identities=17%  Similarity=0.211  Sum_probs=190.9

Q ss_pred             ccccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-----CeeEEEEeeCCCC
Q 021659           43 HRIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-----RKRLLVFDNIENG  117 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-----~~~~lv~e~~~~~  117 (309)
                      .+.||+|+||.||+|++ +|+.||+|++............|+..+.+++||||+++++++..     ...++||||+++|
T Consensus         8 ~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g   86 (303)
T d1vjya_           8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHG   86 (303)
T ss_dssp             EEEEECCSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTC
T ss_pred             EEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecccCC
Confidence            46899999999999997 57899999986544322233445555667899999999998753     2467999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhc-----CCCCeeecccCCCceeeCCCCceeEeccccccccc----
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLF-----SNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----  188 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~-----h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----  188 (309)
                      +|.+++++   ..+++..+..++.+++.||.|+|+.     |+++|+||||||+|||++.++.+||+|||+++...    
T Consensus        87 ~L~~~l~~---~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~  163 (303)
T d1vjya_          87 SLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD  163 (303)
T ss_dssp             BHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTT
T ss_pred             CHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccccCCCc
Confidence            99999985   5699999999999999999999753     46899999999999999999999999999986442    


Q ss_pred             -------ccCCCCCCCCCCCCCC--------CCCCCcEeehhhHHHHHHhCCCCCCCCcc-------------HHHHHHH
Q 021659          189 -------NYATMPHSSCPEDCST--------QDCSNIIFQLGVLILELVTGQSPEEGDVD-------------LIQWIQE  240 (309)
Q Consensus       189 -------~~~~~~~~~~PE~~~~--------~~~~~Dv~slG~~l~~l~tg~~p~~~~~~-------------~~~~~~~  240 (309)
                             ...+|+.|+|||....        .+.++|||||||++|||+||..||.....             .......
T Consensus       164 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (303)
T d1vjya_         164 TIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRK  243 (303)
T ss_dssp             EECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHH
T ss_pred             ceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHH
Confidence                   2468899999996443        24578999999999999999888642210             0011111


Q ss_pred             hcccccccccccCcCCCCC-CHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcccccc
Q 021659          241 SSISSSIHRMIDPDLGGSY-DSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCYK  302 (309)
Q Consensus       241 ~~~~~~~~~~~~~~l~~~~-~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~~~  302 (309)
                      ..    .....+|.++... +......+.+++.+||+.||++|||+.||++.|+++.+-+.++
T Consensus       244 ~~----~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~~~~  302 (303)
T d1vjya_         244 VV----CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGIK  302 (303)
T ss_dssp             HH----TTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHHHCCC
T ss_pred             HH----hccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHhcCCC
Confidence            11    1111223332222 2334567888888999999999999999999999776655443

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-47  Score=330.44  Aligned_cols=238  Identities=17%  Similarity=0.243  Sum_probs=183.6

Q ss_pred             ccccccCCCceEEEEEEcC----CcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCC
Q 021659           43 HRIVYTNSHGAAYKARFQD----GEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIEN  116 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~~----~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~  116 (309)
                      .+.||+|+||.||+|.+..    +..||+|.+.....  ..+.+.+|++++++++||||++++|++.+...++||||+++
T Consensus        12 ~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~iv~E~~~~   91 (273)
T d1mp8a_          12 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTL   91 (273)
T ss_dssp             EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEEEECCTT
T ss_pred             EEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCeEEEEEEeccC
Confidence            3689999999999998632    35688998854332  24578999999999999999999999988888999999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc--------
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR--------  188 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~--------  188 (309)
                      |+|.+++... ...+++..++.++.|+++||.||   |+++++||||||+||+++.++.+||+|||+++...        
T Consensus        92 g~l~~~~~~~-~~~l~~~~~~~~~~qi~~gl~yl---H~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~~~~  167 (273)
T d1mp8a_          92 GELRSFLQVR-KYSLDLASLILYAYQLSTALAYL---ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS  167 (273)
T ss_dssp             EEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEEETTEEEECC----------------
T ss_pred             CcHHhhhhcc-CCCCCHHHHHHHHHHHHHHhhhh---cccCeeccccchhheeecCCCcEEEccchhheeccCCcceecc
Confidence            9999987542 46799999999999999999999   77899999999999999999999999999987543        


Q ss_pred             ccCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccH--HHHHHHhcccccccccccCcCCCCCCHHH
Q 021659          189 NYATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDL--IQWIQESSISSSIHRMIDPDLGGSYDSKE  263 (309)
Q Consensus       189 ~~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  263 (309)
                      ...+|+.|+|||..  ..++.++|||||||++|||+| |.+||.+....  ...+..    +..     +..+...    
T Consensus       168 ~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~----~~~-----~~~~~~~----  234 (273)
T d1mp8a_         168 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN----GER-----LPMPPNC----  234 (273)
T ss_dssp             ---CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT----TCC-----CCCCTTC----
T ss_pred             ceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHc----CCC-----CCCCCCC----
Confidence            23467889999974  345788999999999999998 88998754322  222211    111     1111122    


Q ss_pred             HHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          264 LKKLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       264 ~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                      ...+.+++.+||..||++|||+.||++.|+++++
T Consensus       235 ~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~  268 (273)
T d1mp8a_         235 PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE  268 (273)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            2345667779999999999999999999987764

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-46  Score=332.61  Aligned_cols=231  Identities=17%  Similarity=0.188  Sum_probs=187.8

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEeccc----cccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCC
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQAL----NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIEN  116 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~----~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~  116 (309)
                      .+.||+|+||.||+|+. .+++.||+|++...    ....+.+.+|+.+|++++||||+++++++.+ ...|+||||+++
T Consensus        10 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ey~~g   89 (337)
T d1o6la_          10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG   89 (337)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred             EEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccceeccCC
Confidence            36899999999999997 56899999999542    2345678999999999999999999997765 688899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------c
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------N  189 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~  189 (309)
                      |+|.+++..  ...+++..+..++.|++.||+||   |+++|+||||||+|||++.+|.+||+|||+++...       .
T Consensus        90 g~L~~~~~~--~~~~~e~~~~~~~~qil~al~yl---H~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~~~~  164 (337)
T d1o6la_          90 GELFFHLSR--ERVFTEERARFYGAEIVSALEYL---HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT  164 (337)
T ss_dssp             CBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCC
T ss_pred             Cchhhhhhc--ccCCcHHHHHHHHHHHhhhhhhh---hhcCccccccCHHHeEecCCCCEEEeecccccccccCCccccc
Confidence            999999987  57899999999999999999999   78899999999999999999999999999997542       2


Q ss_pred             cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHH
Q 021659          190 YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKL  267 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  267 (309)
                      ..||+.|+|||...+  +++++|+|||||++|||++|+.||.+..... ...... ...      ...+...+    .++
T Consensus       165 ~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~-~~~~i~-~~~------~~~p~~~s----~~~  232 (337)
T d1o6la_         165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER-LFELIL-MEE------IRFPRTLS----PEA  232 (337)
T ss_dssp             CEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHH-HCC------CCCCTTSC----HHH
T ss_pred             ceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHH-HHHHHh-cCC------CCCCccCC----HHH
Confidence            467899999997543  5889999999999999999999998754322 111111 111      11222222    234


Q ss_pred             HHHHHHccCCCCCCCCC-----hHHHHH
Q 021659          268 LAVARLCIKTKDKPTIS-----IPQISR  290 (309)
Q Consensus       268 ~~l~~~cl~~dp~~Rps-----~~evl~  290 (309)
                      .+++.+||++||++||+     +.|+++
T Consensus       233 ~dli~~~L~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         233 KSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             HHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HHHHHhhccCCchhhcccccccHHHHHc
Confidence            56666999999999995     778775

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-46  Score=331.33  Aligned_cols=236  Identities=14%  Similarity=0.178  Sum_probs=188.8

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEe-CCeeEEEEeeCCCCCHH
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFST-GRKRLLVFDNIENGSLK  120 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~-~~~~~lv~e~~~~~sL~  120 (309)
                      .+.||+|+||.||+|... +++.||+|.+.....+...+.+|+++|++++||||+++++++. +...|+||||+++|+|.
T Consensus        10 ~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~gg~L~   89 (321)
T d1tkia_          10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIF   89 (321)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHH
T ss_pred             EEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecCCCCcHH
Confidence            368999999999999974 6889999999766666677899999999999999999999765 57889999999999999


Q ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC--CceeEecccccccccc------cCC
Q 021659          121 EHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN--FTAKLSDVGFFNSVRN------YAT  192 (309)
Q Consensus       121 ~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~--~~~kl~dfg~~~~~~~------~~~  192 (309)
                      +++... ...+++.++..++.|++.||.||   |+.+|+||||||+|||++.+  ..+|++|||++.....      ..+
T Consensus        90 ~~i~~~-~~~l~e~~~~~i~~qi~~al~yL---H~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~~~~~~  165 (321)
T d1tkia_          90 ERINTS-AFELNEREIVSYVHQVCEALQFL---HSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFT  165 (321)
T ss_dssp             HHHTSS-SCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEES
T ss_pred             HHHHhc-CCCCCHHHHHHHHHHHHHHHHHH---HHcCCCcccccccceeecCCCceEEEEcccchhhccccCCccccccc
Confidence            999752 34799999999999999999999   77899999999999999854  5799999999875432      357


Q ss_pred             CCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHH
Q 021659          193 MPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAV  270 (309)
Q Consensus       193 ~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l  270 (309)
                      ++.|++||...+  ++.++|||||||++|+|++|+.||.+.................+....+.+        ..++.++
T Consensus       166 t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~--------s~~~~~l  237 (321)
T d1tkia_         166 APEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEI--------SIEAMDF  237 (321)
T ss_dssp             CGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTS--------CHHHHHH
T ss_pred             ccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCC--------CHHHHHH
Confidence            789999996433  478899999999999999999999876543222221111111111111111        2345566


Q ss_pred             HHHccCCCCCCCCChHHHHH
Q 021659          271 ARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       271 ~~~cl~~dp~~Rps~~evl~  290 (309)
                      +.+||.+||++|||+.|+++
T Consensus       238 i~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         238 VDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             HHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHccCChhHCcCHHHHhc
Confidence            77999999999999999986

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-46  Score=328.72  Aligned_cols=245  Identities=20%  Similarity=0.182  Sum_probs=186.3

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccccc------HHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLE------KDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIE  115 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~------~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~  115 (309)
                      ++||+|+||+||+|+. .+|+.||+|++......      .+.+.+|+.++++++||||+++++++.+ ...|+||||+.
T Consensus         4 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~~   83 (299)
T d1ua2a_           4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME   83 (299)
T ss_dssp             EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCS
T ss_pred             eEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhhc
Confidence            5799999999999997 46899999998543221      2368899999999999999999997765 77899999999


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------  188 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------  188 (309)
                      ++++..+...  ...+++..+..++.|++.||.||   |+++++||||||+||+++.++.+||+|||++....       
T Consensus        84 ~~~~~~~~~~--~~~l~~~~~~~~~~qil~aL~~l---H~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~  158 (299)
T d1ua2a_          84 TDLEVIIKDN--SLVLTPSHIKAYMLMTLQGLEYL---HQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYT  158 (299)
T ss_dssp             EEHHHHHTTC--CSSCCSSHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCC
T ss_pred             chHHhhhhhc--ccCCCHHHHHHHHHHHHHHHHHh---hccceecccCCcceEEecCCCccccccCccccccCCCccccc
Confidence            9887777655  57789999999999999999999   78899999999999999999999999999986543       


Q ss_pred             ccCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcc-----cccccccccC---c-CC
Q 021659          189 NYATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSI-----SSSIHRMIDP---D-LG  256 (309)
Q Consensus       189 ~~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~---~-l~  256 (309)
                      ...+|+.|+|||...   .++.++|||||||++|+|++|+.||.+.............     ..........   . ..
T Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~  238 (299)
T d1ua2a_         159 HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK  238 (299)
T ss_dssp             CSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCC
T ss_pred             ceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhc
Confidence            235789999999643   3478899999999999999999999876554433221110     0000000000   0 00


Q ss_pred             --CCCCH-----HHHHHHHHHHHHccCCCCCCCCChHHHHH--HHh
Q 021659          257 --GSYDS-----KELKKLLAVARLCIKTKDKPTISIPQISR--YLQ  293 (309)
Q Consensus       257 --~~~~~-----~~~~~l~~l~~~cl~~dp~~Rps~~evl~--~L~  293 (309)
                        .....     ....++.+++.+||+.||++|||+.|+++  .++
T Consensus       239 ~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~  284 (299)
T d1ua2a_         239 SFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFS  284 (299)
T ss_dssp             CCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGT
T ss_pred             cCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhC
Confidence              00010     11345667777999999999999999996  454

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-47  Score=330.24  Aligned_cols=239  Identities=19%  Similarity=0.225  Sum_probs=181.0

Q ss_pred             ccccccCCCceEEEEEEc--CC--cEEEEEEecccc----ccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeC
Q 021659           43 HRIVYTNSHGAAYKARFQ--DG--EVALVKEIQALN----LEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNI  114 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~--~~--~~va~K~~~~~~----~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~  114 (309)
                      .+.||+|+||.||+|++.  ++  ..||+|.+....    ...++|.+|++++++++||||++++|++.+...++||||+
T Consensus        13 ~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~~~~lv~e~~   92 (273)
T d1u46a_          13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELA   92 (273)
T ss_dssp             EEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECC
T ss_pred             EEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeecchheeeeee
Confidence            368999999999999863  22  368999885432    2235789999999999999999999999877789999999


Q ss_pred             CCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-----
Q 021659          115 ENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-----  189 (309)
Q Consensus       115 ~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-----  189 (309)
                      ++|++.+++... ...+++..++.++.|++.||.||   |+++++||||||+||+++.++.+||+|||+++....     
T Consensus        93 ~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~gl~yl---H~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~~  168 (273)
T d1u46a_          93 PLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYL---ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY  168 (273)
T ss_dssp             TTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEE
T ss_pred             cCcchhhhhhcc-cCCCCHHHHHHHHHHHHHHHHHh---hhCCEeeeeecHHHhccccccceeeccchhhhhcccCCCcc
Confidence            999999887642 35699999999999999999999   678999999999999999999999999999875421     


Q ss_pred             -----cCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCH
Q 021659          190 -----YATMPHSSCPEDCST--QDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDS  261 (309)
Q Consensus       190 -----~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  261 (309)
                           ..++..|+|||....  .+.++||||||+++|||+| |+.||.+..... ........+..     +......  
T Consensus       169 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~-~~~~i~~~~~~-----~~~~~~~--  240 (273)
T d1u46a_         169 VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ-ILHKIDKEGER-----LPRPEDC--  240 (273)
T ss_dssp             EC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-HHHHHHTSCCC-----CCCCTTC--
T ss_pred             eecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHH-HHHHHHhCCCC-----CCCcccc--
Confidence                 235668999996433  4678999999999999998 899997653332 22222111111     1111122  


Q ss_pred             HHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhh
Q 021659          262 KELKKLLAVARLCIKTKDKPTISIPQISRYLQNE  295 (309)
Q Consensus       262 ~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~  295 (309)
                        ...+.+++.+||+.||++|||+.||++.|+++
T Consensus       241 --~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         241 --PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             --CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --cHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence              23456677799999999999999999999864

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-46  Score=327.70  Aligned_cols=243  Identities=19%  Similarity=0.248  Sum_probs=187.8

Q ss_pred             ccccccccCCCceEEEEEEcCC----cEEEEEEeccc--cccHHHHHHHHHHHccCCCCCcceEeeeEeC--CeeEEEEe
Q 021659           41 GFHRIVYTNSHGAAYKARFQDG----EVALVKEIQAL--NLEKDAFYREIQLLGRLHHRHLLALQGFSTG--RKRLLVFD  112 (309)
Q Consensus        41 ~~~~~lg~G~~~~v~~~~~~~~----~~va~K~~~~~--~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~--~~~~lv~e  112 (309)
                      +|.++||+|+||+||+|.+.++    ..||+|++...  ....++|.+|++++++++||||++++|++.+  ...++|||
T Consensus        30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E  109 (311)
T d1r0pa_          30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP  109 (311)
T ss_dssp             EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEE
T ss_pred             ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEE
Confidence            4456899999999999997432    35899998532  2234679999999999999999999998643  57789999


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc---
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN---  189 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~---  189 (309)
                      |+++|+|.+++... ...+++..++.++.|++.||.||   |+.+++||||||+|||+++++.+||+|||+++....   
T Consensus       110 ~~~~g~l~~~~~~~-~~~~~~~~~~~i~~qia~gL~~l---H~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~  185 (311)
T d1r0pa_         110 YMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF  185 (311)
T ss_dssp             CCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTC
T ss_pred             EeecCchhhhhccc-cccchHHHHHHHHHHHHHhhhhh---cccCcccCCccHHhEeECCCCCEEEecccchhhcccccc
Confidence            99999999988753 45678889999999999999999   778999999999999999999999999999875431   


Q ss_pred             --------cCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCC
Q 021659          190 --------YATMPHSSCPEDC--STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSY  259 (309)
Q Consensus       190 --------~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  259 (309)
                              ..+|+.|+|||..  ...+.++||||||+++|||+||..||.......+....... +..     +..+.. 
T Consensus       186 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~-g~~-----~~~p~~-  258 (311)
T d1r0pa_         186 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-GRR-----LLQPEY-  258 (311)
T ss_dssp             CCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHT-TCC-----CCCCTT-
T ss_pred             ccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHc-CCC-----CCCccc-
Confidence                    2466789999963  34578899999999999999988887655433322222111 111     111111 


Q ss_pred             CHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          260 DSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       260 ~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                      .   ...+.+++.+||+.||++|||+.||++.|++...
T Consensus       259 ~---~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~  293 (311)
T d1r0pa_         259 C---PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS  293 (311)
T ss_dssp             C---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             C---cHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            1   2345566779999999999999999999997764

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-46  Score=332.07  Aligned_cols=236  Identities=14%  Similarity=0.220  Sum_probs=186.0

Q ss_pred             cccccCCCceEEEEEEc-CCc----EEEEEEeccc--cccHHHHHHHHHHHccCCCCCcceEeeeEeCCeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGE----VALVKEIQAL--NLEKDAFYREIQLLGRLHHRHLLALQGFSTGRKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~----~va~K~~~~~--~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~~~~~lv~e~~~~  116 (309)
                      +.||+|+||+||+|.+. +|+    .||+|.+...  ....+.+.+|++++++++||||++++|++.+...+++++++.+
T Consensus        15 ~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~v~e~~~~   94 (317)
T d1xkka_          15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPF   94 (317)
T ss_dssp             EEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTT
T ss_pred             eEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeeEEEEeccC
Confidence            68999999999999974 333    5888888532  3345789999999999999999999999988888899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc--------
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR--------  188 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~--------  188 (309)
                      ++|.+.+... ...+++..++.++.|++.||.||   |+++|+||||||+||+++.++.+||+|||+++...        
T Consensus        95 ~~l~~~~~~~-~~~~~~~~~~~i~~qi~~gl~yL---H~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~  170 (317)
T d1xkka_          95 GCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA  170 (317)
T ss_dssp             CBHHHHHHHT-SSSCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC----
T ss_pred             Cccccccccc-ccCCCHHHHHHHHHHHHHHHHHH---HHcCcccCcchhhcceeCCCCCeEeeccccceecccccccccc
Confidence            9999887653 56799999999999999999999   67799999999999999999999999999987542        


Q ss_pred             -ccCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCc--cHHHHHHHhcccccccccccCcCCCCCCHH
Q 021659          189 -NYATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDV--DLIQWIQESSISSSIHRMIDPDLGGSYDSK  262 (309)
Q Consensus       189 -~~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  262 (309)
                       ...+|+.|+|||..  ..++.++|||||||++|||+| |+.||.+..  .+...+...    .     .+..+..    
T Consensus       171 ~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~----~-----~~~~p~~----  237 (317)
T d1xkka_         171 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG----E-----RLPQPPI----  237 (317)
T ss_dssp             ----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHT----C-----CCCCCTT----
T ss_pred             cccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC----C-----CCCCCcc----
Confidence             12467899999964  335788999999999999998 788887543  222222211    0     0111111    


Q ss_pred             HHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhh
Q 021659          263 ELKKLLAVARLCIKTKDKPTISIPQISRYLQNEV  296 (309)
Q Consensus       263 ~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~  296 (309)
                      ....+.+++.+||..||++|||+.|+++.|+.+.
T Consensus       238 ~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~  271 (317)
T d1xkka_         238 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA  271 (317)
T ss_dssp             BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHH
Confidence            1245667777999999999999999999887653

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2e-46  Score=328.86  Aligned_cols=243  Identities=22%  Similarity=0.278  Sum_probs=190.0

Q ss_pred             cccc--cccccCCCceEEEEEEc------CCcEEEEEEecccccc--HHHHHHHHHHHccCCCCCcceEeeeEeC-CeeE
Q 021659           40 DGFH--RIVYTNSHGAAYKARFQ------DGEVALVKEIQALNLE--KDAFYREIQLLGRLHHRHLLALQGFSTG-RKRL  108 (309)
Q Consensus        40 ~~~~--~~lg~G~~~~v~~~~~~------~~~~va~K~~~~~~~~--~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~  108 (309)
                      ++|+  +.||+|+||.||+|++.      +++.||+|++......  .++|.+|++++++++||||+++++++.. ...+
T Consensus        13 ~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~   92 (301)
T d1lufa_          13 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMC   92 (301)
T ss_dssp             GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCE
T ss_pred             HHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceE
Confidence            3454  68999999999999964      3578999998643322  4579999999999999999999998765 6788


Q ss_pred             EEEeeCCCCCHHHhhcCC----------------------CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCC
Q 021659          109 LVFDNIENGSLKEHLNDP----------------------LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSS  166 (309)
Q Consensus       109 lv~e~~~~~sL~~~i~~~----------------------~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~  166 (309)
                      ++|||+++|+|.+++...                      ....+++..++.++.|++.||+||   |+.+++||||||+
T Consensus        93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yl---H~~~ivHrDlKp~  169 (301)
T d1lufa_          93 LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATR  169 (301)
T ss_dssp             EEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGG
T ss_pred             EEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhc---ccCCeEeeEEccc
Confidence            999999999999998531                      123588999999999999999999   7789999999999


Q ss_pred             ceeeCCCCceeEeccccccccc---------ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCC-CCCCCCccH
Q 021659          167 SIMLDENFTAKLSDVGFFNSVR---------NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQ-SPEEGDVDL  234 (309)
Q Consensus       167 nill~~~~~~kl~dfg~~~~~~---------~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~-~p~~~~~~~  234 (309)
                      ||+++.++.+||+|||+++...         ...+++.|+|||...  .++.++|||||||++|||++|. +||.+.. .
T Consensus       170 NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~-~  248 (301)
T d1lufa_         170 NCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA-H  248 (301)
T ss_dssp             GEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-H
T ss_pred             ceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCC-H
Confidence            9999999999999999986432         234667899999643  3478999999999999999986 5666543 2


Q ss_pred             HHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhh
Q 021659          235 IQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEV  296 (309)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~  296 (309)
                      .+...... .+..     +..+...    ..++.+++.+||+.||++|||+.||++.|++++
T Consensus       249 ~e~~~~v~-~~~~-----~~~p~~~----~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         249 EEVIYYVR-DGNI-----LACPENC----PLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             HHHHHHHH-TTCC-----CCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             HHHHHHHH-cCCC-----CCCCccc----hHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            22222211 1111     1112222    235667777999999999999999999999875

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.5e-46  Score=331.51  Aligned_cols=230  Identities=17%  Similarity=0.241  Sum_probs=187.2

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccc----cccHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQAL----NLEKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENG  117 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~----~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~  117 (309)
                      +.||+|+||.||+|+. .+|+.||+|++...    ....+.+.+|+.+|++++||||+++++++.+ ...++||||+.+|
T Consensus        47 ~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~e~~~~g  126 (350)
T d1rdqe_          47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG  126 (350)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred             EEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccccccccc
Confidence            6899999999999997 46899999998532    2334678999999999999999999997765 6778999999999


Q ss_pred             CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc----cCCC
Q 021659          118 SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN----YATM  193 (309)
Q Consensus       118 sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~----~~~~  193 (309)
                      +|.+++..  ...+++..+..++.|++.||.||   |+++|+||||||+|||++.++.+||+|||+++....    ..||
T Consensus       127 ~l~~~l~~--~~~l~e~~~~~i~~qi~~aL~yL---H~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~~~~Gt  201 (350)
T d1rdqe_         127 EMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGT  201 (350)
T ss_dssp             BHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEEC
T ss_pred             chhhhHhh--cCCCCHHHHHHHHHHHHHHHHHH---HhCCEecCcCCHHHcccCCCCCEEeeeceeeeecccccccccCc
Confidence            99999976  56799999999999999999999   778999999999999999999999999999976543    4578


Q ss_pred             CCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHHHHHHHH
Q 021659          194 PHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELKKLLAVA  271 (309)
Q Consensus       194 ~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~  271 (309)
                      +.|+|||...+  +++++|||||||++|+|+||+.||.+..............        +..+...    ..++.+++
T Consensus       202 ~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~--------~~~p~~~----s~~~~~li  269 (350)
T d1rdqe_         202 PEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--------VRFPSHF----SSDLKDLL  269 (350)
T ss_dssp             GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--------CCCCTTC----CHHHHHHH
T ss_pred             cccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCC--------CCCCccC----CHHHHHHH
Confidence            99999997543  4788999999999999999999998764333222211111        1111122    23455666


Q ss_pred             HHccCCCCCCCC-----ChHHHHH
Q 021659          272 RLCIKTKDKPTI-----SIPQISR  290 (309)
Q Consensus       272 ~~cl~~dp~~Rp-----s~~evl~  290 (309)
                      .+||++||.+|+     |+.|+++
T Consensus       270 ~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         270 RNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             HHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             HHHhhhCHHhccccccccHHHHHc
Confidence            699999999994     8999985

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-46  Score=329.45  Aligned_cols=234  Identities=18%  Similarity=0.230  Sum_probs=182.8

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccC-CCCCcceEeeeEeC-----CeeEEEEeeCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRL-HHRHLLALQGFSTG-----RKRLLVFDNIEN  116 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-----~~~~lv~e~~~~  116 (309)
                      +.||+|+||+||+|+. .+++.||+|++..    ...+.+|++++.++ +||||+++++++.+     ...|+|||||++
T Consensus        18 ~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~g   93 (335)
T d2ozaa1          18 QVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG   93 (335)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCS
T ss_pred             EEeeeccCeEEEEEEECCCCCEEEEEEECC----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEECCCC
Confidence            4599999999999997 5689999999853    34577899987655 79999999997642     456899999999


Q ss_pred             CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC---CCceeEeccccccccc-----
Q 021659          117 GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE---NFTAKLSDVGFFNSVR-----  188 (309)
Q Consensus       117 ~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~---~~~~kl~dfg~~~~~~-----  188 (309)
                      |+|.+++...+...+++..+..++.|++.||.||   |+.+|+||||||+||+++.   ++.+||+|||+++...     
T Consensus        94 g~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~yl---H~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~~  170 (335)
T d2ozaa1          94 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL---HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL  170 (335)
T ss_dssp             EEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCCC
T ss_pred             CcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHH---HHcCCccccccccccccccccccccccccccceeeeccCCCcc
Confidence            9999999875567899999999999999999999   7889999999999999985   4679999999987443     


Q ss_pred             -ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHH--HHHHHhcccccccccccCcCCCCCCHHH
Q 021659          189 -NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLI--QWIQESSISSSIHRMIDPDLGGSYDSKE  263 (309)
Q Consensus       189 -~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~  263 (309)
                       ...||+.|+|||...+  ++.++|||||||++|+|+||+.||.+.....  ..+.......      ....+.......
T Consensus       171 ~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~------~~~~~~~~~~~~  244 (335)
T d2ozaa1         171 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG------QYEFPNPEWSEV  244 (335)
T ss_dssp             CCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSC------SSSCCTTHHHHS
T ss_pred             ccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcC------CCCCCCcccccC
Confidence             3468999999998654  4788999999999999999999997543211  1111110000      001111111222


Q ss_pred             HHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          264 LKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       264 ~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ..++.+++.+||+.||++|||+.|+++
T Consensus       245 s~~~~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         245 SEEVKMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            456677778999999999999999987

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-45  Score=324.21  Aligned_cols=244  Identities=20%  Similarity=0.288  Sum_probs=188.0

Q ss_pred             cccccccCCCceEEEEEEcC-Cc--EEEEEEeccc--cccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEeeC
Q 021659           42 FHRIVYTNSHGAAYKARFQD-GE--VALVKEIQAL--NLEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFDNI  114 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~-~~--~va~K~~~~~--~~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e~~  114 (309)
                      +.+.||+|+||.||+|.+.+ +.  .||+|.+...  ....+.+.+|+++|+++ +||||++++|++.+ ...++||||+
T Consensus        14 ~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~ey~   93 (309)
T d1fvra_          14 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA   93 (309)
T ss_dssp             EEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             EEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEEEEec
Confidence            34689999999999999743 44  4677877432  22345799999999999 79999999997764 6788999999


Q ss_pred             CCCCHHHhhcCC--------------CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEec
Q 021659          115 ENGSLKEHLNDP--------------LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSD  180 (309)
Q Consensus       115 ~~~sL~~~i~~~--------------~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~d  180 (309)
                      ++|+|.+++...              ....+++..+..++.|++.||.||   |+++++||||||+|||++.++.+||+|
T Consensus        94 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~l---H~~~iiHrDlkp~NIL~~~~~~~kl~D  170 (309)
T d1fvra_          94 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIAD  170 (309)
T ss_dssp             TTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECGGGCEEECC
T ss_pred             CCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhh---hcCCccccccccceEEEcCCCceEEcc
Confidence            999999998642              246799999999999999999999   778999999999999999999999999


Q ss_pred             cccccccc------ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCC-CCCCCccHHHHHHHhcccccccccc
Q 021659          181 VGFFNSVR------NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQS-PEEGDVDLIQWIQESSISSSIHRMI  251 (309)
Q Consensus       181 fg~~~~~~------~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~-p~~~~~~~~~~~~~~~~~~~~~~~~  251 (309)
                      ||++....      ...+|..|++||...  .++.++||||||+++|||++|.. ||.+. ...+........ .     
T Consensus       171 fG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~-~~~~~~~~i~~~-~-----  243 (309)
T d1fvra_         171 FGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-TCAELYEKLPQG-Y-----  243 (309)
T ss_dssp             TTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC-CHHHHHHHGGGT-C-----
T ss_pred             ccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCC-CHHHHHHHHHhc-C-----
Confidence            99986443      235778999999643  34788999999999999999765 56543 333333322211 1     


Q ss_pred             cCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhccc
Q 021659          252 DPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQ  299 (309)
Q Consensus       252 ~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~  299 (309)
                      .+..+...    ...+.+++.+||+.||++|||+.||++.|+++++-.
T Consensus       244 ~~~~~~~~----~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~~  287 (309)
T d1fvra_         244 RLEKPLNC----DDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER  287 (309)
T ss_dssp             CCCCCTTB----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             CCCCCccC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence            11111111    235566677999999999999999999999887543

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3.7e-45  Score=328.26  Aligned_cols=233  Identities=18%  Similarity=0.235  Sum_probs=181.8

Q ss_pred             ccccccCCCceEEEEEEc-CCcEEEEEEecccc----ccHHHHH---HHHHHHccCCCCCcceEeeeEeC-CeeEEEEee
Q 021659           43 HRIVYTNSHGAAYKARFQ-DGEVALVKEIQALN----LEKDAFY---REIQLLGRLHHRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~----~~~~~~~---~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      .+.||+|+||.||+|+.. +|+.||+|++....    .....+.   .++.+++.++||||+++++++.+ ...|+||||
T Consensus         9 ~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~ivmE~   88 (364)
T d1omwa3           9 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDL   88 (364)
T ss_dssp             EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             eeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEEEEEEe
Confidence            368999999999999974 68999999985322    1223333   34777888899999999997765 778999999


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-----
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-----  188 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-----  188 (309)
                      +++|+|.+++..  ...+++..+..++.|++.||.||   |+++++||||||+|||++.++.+||+|||++....     
T Consensus        89 ~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~aL~yl---H~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~~~  163 (364)
T d1omwa3          89 MNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHM---HNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH  163 (364)
T ss_dssp             CCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSSCCC
T ss_pred             cCCCcHHHHHHh--cccccHHHHHHHHHHHHHHHHHH---HHCCccceeeccceeEEcCCCcEEEeeeceeeecCCCccc
Confidence            999999999976  57789999999999999999999   78899999999999999999999999999987543     


Q ss_pred             ccCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccH-HHHHHHhcccccccccccCcCCCCCCHHHH
Q 021659          189 NYATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDL-IQWIQESSISSSIHRMIDPDLGGSYDSKEL  264 (309)
Q Consensus       189 ~~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  264 (309)
                      ...||+.|+|||...   .++.++|||||||++|+|+||+.||...... ...+.......      .+..+...    .
T Consensus       164 ~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~------~~~~~~~~----s  233 (364)
T d1omwa3         164 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM------AVELPDSF----S  233 (364)
T ss_dssp             SCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSC------CCCCCSSS----C
T ss_pred             ccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC------CCCCCCCC----C
Confidence            346899999999643   3478899999999999999999999754321 11111111111      01111112    2


Q ss_pred             HHHHHHHHHccCCCCCCCCC-----hHHHHH
Q 021659          265 KKLLAVARLCIKTKDKPTIS-----IPQISR  290 (309)
Q Consensus       265 ~~l~~l~~~cl~~dp~~Rps-----~~evl~  290 (309)
                      ..+.+++.+||++||++|||     +.|+++
T Consensus       234 ~~~~~li~~~L~~dP~~R~t~~~~~a~eil~  264 (364)
T d1omwa3         234 PELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  264 (364)
T ss_dssp             HHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred             HHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence            34556666999999999999     578874

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-45  Score=320.03  Aligned_cols=246  Identities=19%  Similarity=0.208  Sum_probs=185.3

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~s  118 (309)
                      +.||+|+||+||+|+. .+++.||+|++.....   ..+.+.+|++++++++||||+++++++.+ ...|+||||+.+ +
T Consensus         8 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~~~~-~   86 (298)
T d1gz8a_           8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-D   86 (298)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-E
T ss_pred             cEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEeecCC-c
Confidence            6899999999999997 5689999999954332   24678999999999999999999997754 788999999976 4


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccC
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYA  191 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~  191 (309)
                      +.+++.......+++..+..++.|++.||.||   |+.+|+||||||+||+++.++.+|++|||++....       ...
T Consensus        87 ~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yL---H~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  163 (298)
T d1gz8a_          87 LKKFMDASALTGIPLPLIKSYLFQLLQGLAFC---HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV  163 (298)
T ss_dssp             HHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTCCB
T ss_pred             hhhhhhhhcccCCCHHHHHHHHHHHHHHHHHh---hcCCEEccccCchheeecccCcceeccCCcceeccCCcccceeec
Confidence            44544433357799999999999999999999   77899999999999999999999999999986442       336


Q ss_pred             CCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccC----------cCC--
Q 021659          192 TMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDP----------DLG--  256 (309)
Q Consensus       192 ~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----------~l~--  256 (309)
                      +|+.|.|||....   .+.++|||||||++|+|++|+.||.+..............+...+...+          ...  
T Consensus       164 gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (298)
T d1gz8a_         164 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW  243 (298)
T ss_dssp             CCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCC
T ss_pred             ccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccc
Confidence            8899999995322   3678999999999999999999998765443332211110000000000          000  


Q ss_pred             CCCC-----HHHHHHHHHHHHHccCCCCCCCCChHHHHHH--Hh
Q 021659          257 GSYD-----SKELKKLLAVARLCIKTKDKPTISIPQISRY--LQ  293 (309)
Q Consensus       257 ~~~~-----~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~--L~  293 (309)
                      ....     .....++.+++.+||++||++|||+.|+++.  ++
T Consensus       244 ~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~  287 (298)
T d1gz8a_         244 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ  287 (298)
T ss_dssp             CCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGT
T ss_pred             cccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhc
Confidence            0000     0113456667779999999999999999974  55

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-45  Score=323.90  Aligned_cols=242  Identities=17%  Similarity=0.195  Sum_probs=179.4

Q ss_pred             ccccccCCCceEEEEEEc------CCcEEEEEEecccc--ccHHHHHHHHHHHccC-CCCCcceEeeeEeC--CeeEEEE
Q 021659           43 HRIVYTNSHGAAYKARFQ------DGEVALVKEIQALN--LEKDAFYREIQLLGRL-HHRHLLALQGFSTG--RKRLLVF  111 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~------~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~--~~~~lv~  111 (309)
                      .+.||+|+||.||+|.+.      +++.||+|++....  ...+.+..|+..+.++ +|+||+.+++++..  ...++||
T Consensus        18 ~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~~iv~   97 (299)
T d1ywna1          18 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV   97 (299)
T ss_dssp             EEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEE
T ss_pred             eeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCeEEEEE
Confidence            368999999999999963      24689999985433  2345678888888887 68999999997754  4678999


Q ss_pred             eeCCCCCHHHhhcCC--------------CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCcee
Q 021659          112 DNIENGSLKEHLNDP--------------LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAK  177 (309)
Q Consensus       112 e~~~~~sL~~~i~~~--------------~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~k  177 (309)
                      ||+++|+|.+++...              ....+++..++.++.|+++||.||   |+++|+||||||+|||++.++.+|
T Consensus        98 E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~yl---H~~~ivHrDlKp~NILl~~~~~~K  174 (299)
T d1ywna1          98 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVK  174 (299)
T ss_dssp             ECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECGGGCEE
T ss_pred             EecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHH---HhCCCcCCcCCccceeECCCCcEE
Confidence            999999999998542              134589999999999999999999   778999999999999999999999


Q ss_pred             Eeccccccccc---------ccCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHhCC-CCCCCCccHHHHHHHhcccc
Q 021659          178 LSDVGFFNSVR---------NYATMPHSSCPEDC--STQDCSNIIFQLGVLILELVTGQ-SPEEGDVDLIQWIQESSISS  245 (309)
Q Consensus       178 l~dfg~~~~~~---------~~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~tg~-~p~~~~~~~~~~~~~~~~~~  245 (309)
                      |+|||+++...         ...+|+.|+|||..  ...+.++|||||||++|||+||. .||.+........... ..+
T Consensus       175 l~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~-~~~  253 (299)
T d1ywna1         175 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEG  253 (299)
T ss_dssp             ECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHH-HHT
T ss_pred             EccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHH-hcC
Confidence            99999986432         23577889999964  33578899999999999999865 5776543322222111 111


Q ss_pred             cccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          246 SIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       246 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                      ..     +..+...    ..++.+++.+||+.||++|||+.|+++.|+++++
T Consensus       254 ~~-----~~~~~~~----~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq  296 (299)
T d1ywna1         254 TR-----MRAPDYT----TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  296 (299)
T ss_dssp             CC-----CCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CC-----CCCCccC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            11     1121122    2346677779999999999999999999998765

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-45  Score=326.36  Aligned_cols=231  Identities=18%  Similarity=0.252  Sum_probs=184.7

Q ss_pred             cccccccCCCceEEEEEEc-CCcEEEEEEeccc----cccHHHHHHHHHHHc-cCCCCCcceEeeeEeC-CeeEEEEeeC
Q 021659           42 FHRIVYTNSHGAAYKARFQ-DGEVALVKEIQAL----NLEKDAFYREIQLLG-RLHHRHLLALQGFSTG-RKRLLVFDNI  114 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~----~~~~~~~~~ei~~l~-~l~h~niv~~~~~~~~-~~~~lv~e~~  114 (309)
                      +.+.||+|+||+||+|+.. +++.||+|++...    ....+.+..|+.++. .++||||+++++++.+ ...|+||||+
T Consensus         6 i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmEy~   85 (320)
T d1xjda_           6 LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYL   85 (320)
T ss_dssp             EEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEEeec
Confidence            3478999999999999974 6899999999532    334456777887765 6899999999997765 7789999999


Q ss_pred             CCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc------
Q 021659          115 ENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR------  188 (309)
Q Consensus       115 ~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~------  188 (309)
                      ++|+|.+++..  ...+++..+..++.|++.||.||   |+++++||||||+|||++.++.+||+|||+++...      
T Consensus        86 ~~g~L~~~i~~--~~~~~e~~~~~~~~qi~~al~yl---H~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~  160 (320)
T d1xjda_          86 NGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFL---HSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT  160 (320)
T ss_dssp             TTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCB
T ss_pred             CCCcHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHH---HhCCeeeccCcccceeecCCCceeccccchhhhcccccccc
Confidence            99999999976  57799999999999999999999   77899999999999999999999999999987443      


Q ss_pred             -ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCHHHHH
Q 021659          189 -NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDSKELK  265 (309)
Q Consensus       189 -~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  265 (309)
                       ...||+.|+|||...  .+++++|||||||++|+|++|+.||.+.............        .+..+...    ..
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~--------~~~~p~~~----s~  228 (320)
T d1xjda_         161 NTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD--------NPFYPRWL----EK  228 (320)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--------CCCCCTTS----CH
T ss_pred             cccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcC--------CCCCCccC----CH
Confidence             246789999999643  3578999999999999999999999865433222111111        11122122    23


Q ss_pred             HHHHHHHHccCCCCCCCCChH-HHH
Q 021659          266 KLLAVARLCIKTKDKPTISIP-QIS  289 (309)
Q Consensus       266 ~l~~l~~~cl~~dp~~Rps~~-evl  289 (309)
                      .+.+++.+||+.||++|||+. +++
T Consensus       229 ~~~dli~~~L~~dP~~R~s~~~~l~  253 (320)
T d1xjda_         229 EAKDLLVKLFVREPEKRLGVRGDIR  253 (320)
T ss_dssp             HHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             HHHHHHHHhcccCCCCCcCHHHHHH
Confidence            455666699999999999995 675

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=5e-45  Score=317.65  Aligned_cols=242  Identities=16%  Similarity=0.189  Sum_probs=184.8

Q ss_pred             cccccCCCceEEEEEEcCCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           44 RIVYTNSHGAAYKARFQDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      +.||+|+||+||+|+.++++.||+|++.....   ..+.+.+|+.++++++||||+++++++.+ +..+++++++.++.+
T Consensus         8 ~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~~~~~~~   87 (286)
T d1ob3a_           8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLK   87 (286)
T ss_dssp             EEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSEEHH
T ss_pred             cEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEeehhhhH
Confidence            58999999999999998899999999954332   24689999999999999999999997765 678899999988777


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-------ccCC
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-------NYAT  192 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-------~~~~  192 (309)
                      ..+...  ...+++..+..++.|++.||+||   |+.+|+||||||+||+++.++.+|++|||.+....       ...+
T Consensus        88 ~~~~~~--~~~l~~~~~~~i~~qi~~~L~~L---H~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~  162 (286)
T d1ob3a_          88 KLLDVC--EGGLESVTAKSFLLQLLNGIAYC---HDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV  162 (286)
T ss_dssp             HHHHTS--TTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------C
T ss_pred             HHHHhh--cCCcchhhhHHHHHHHHHHHHHh---ccCcEEecCCCCceeeEcCCCCEEecccccceecccCccccceecc
Confidence            777665  57899999999999999999999   67899999999999999999999999999986433       2357


Q ss_pred             CCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHh--ccccccccc--------ccCcCC---
Q 021659          193 MPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQES--SISSSIHRM--------IDPDLG---  256 (309)
Q Consensus       193 ~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~--~~~~~~~~~--------~~~~l~---  256 (309)
                      ++.|.+||...   ..++++|||||||+++||++|+.||.+...........  ........+        ......   
T Consensus       163 ~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (286)
T d1ob3a_         163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYE  242 (286)
T ss_dssp             CCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCC
T ss_pred             cchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhccccccccc
Confidence            78899999643   24789999999999999999999998654433222111  000000000        000000   


Q ss_pred             ----CCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          257 ----GSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       257 ----~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                          ..........+.+++.+||++||++|||+.|+++
T Consensus       243 ~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         243 PLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             CCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                0000111245556677999999999999999984

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-45  Score=324.06  Aligned_cols=242  Identities=17%  Similarity=0.237  Sum_probs=187.1

Q ss_pred             ccccccCCCceEEEEEE------cCCcEEEEEEecccc--ccHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEEe
Q 021659           43 HRIVYTNSHGAAYKARF------QDGEVALVKEIQALN--LEKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVFD  112 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~------~~~~~va~K~~~~~~--~~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~e  112 (309)
                      .+.||+|+||.||+|++      .+++.||+|++....  .....+.+|+.+++++ +||||+++++++.+ ...++|||
T Consensus        28 ~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~~lvmE  107 (311)
T d1t46a_          28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITE  107 (311)
T ss_dssp             EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             eeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEEEEEEE
Confidence            46899999999999985      345789999996433  2345789999999999 69999999998876 56889999


Q ss_pred             eCCCCCHHHhhcCC----------------CCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCce
Q 021659          113 NIENGSLKEHLNDP----------------LKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTA  176 (309)
Q Consensus       113 ~~~~~sL~~~i~~~----------------~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~  176 (309)
                      |+++|+|.+++...                ....+++..+..++.|++.||.||   |+++++||||||+||+++.++.+
T Consensus       108 ~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~L---H~~~ivHrDLKp~NIl~~~~~~~  184 (311)
T d1t46a_         108 YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRIT  184 (311)
T ss_dssp             CCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEETTTEE
T ss_pred             cCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHH---HhCCeeecccccccccccccCcc
Confidence            99999999998642                123689999999999999999999   77899999999999999999999


Q ss_pred             eEecccccccccc---------cCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhccc
Q 021659          177 KLSDVGFFNSVRN---------YATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSIS  244 (309)
Q Consensus       177 kl~dfg~~~~~~~---------~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~  244 (309)
                      |++|||+++....         ..+|+.|+|||..  ...+.++||||||+++|||+| |.+||........ +......
T Consensus       185 ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~-~~~~i~~  263 (311)
T d1t46a_         185 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-FYKMIKE  263 (311)
T ss_dssp             EECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH-HHHHHHH
T ss_pred             cccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHH-HHHHHhc
Confidence            9999999875432         2457789999964  335789999999999999999 5555554322111 1111111


Q ss_pred             ccccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          245 SSIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       245 ~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                      +.     .+..+...    ...+.+++.+||++||++|||+.+|++.|++.+.
T Consensus       264 ~~-----~~~~~~~~----~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~  307 (311)
T d1t46a_         264 GF-----RMLSPEHA----PAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS  307 (311)
T ss_dssp             TC-----CCCCCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CC-----CCCCcccc----cHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhc
Confidence            11     11111111    2456677779999999999999999999987643

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-45  Score=320.48  Aligned_cols=241  Identities=18%  Similarity=0.246  Sum_probs=184.9

Q ss_pred             cccccCCCceEEEEEEcC--------CcEEEEEEeccccc--cHHHHHHHHHHHccC-CCCCcceEeeeEeC-CeeEEEE
Q 021659           44 RIVYTNSHGAAYKARFQD--------GEVALVKEIQALNL--EKDAFYREIQLLGRL-HHRHLLALQGFSTG-RKRLLVF  111 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~--------~~~va~K~~~~~~~--~~~~~~~ei~~l~~l-~h~niv~~~~~~~~-~~~~lv~  111 (309)
                      +.||+|+||.||+|+...        +..||+|++.....  ...++.+|...+.++ +||||+++++++.+ ...++||
T Consensus        19 ~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~~~~~v~   98 (299)
T d1fgka_          19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIV   98 (299)
T ss_dssp             EECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             eEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCCeEEEEE
Confidence            689999999999998532        24799999854433  346788899999888 79999999998865 6788999


Q ss_pred             eeCCCCCHHHhhcCCC--------------CCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCcee
Q 021659          112 DNIENGSLKEHLNDPL--------------KTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAK  177 (309)
Q Consensus       112 e~~~~~sL~~~i~~~~--------------~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~k  177 (309)
                      ||+++|+|.+++....              ...+++..++.++.|++.||.||   |+.+++||||||+|||++.++.+|
T Consensus        99 e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~yl---H~~~ivHrDiKp~NiLl~~~~~~k  175 (299)
T d1fgka_          99 EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMK  175 (299)
T ss_dssp             CCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECTTCCEE
T ss_pred             EccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHh---hhCCEEeeeecccceeecCCCCeE
Confidence            9999999999996532              35689999999999999999999   788999999999999999999999


Q ss_pred             Eeccccccccc---------ccCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHh-CCCCCCCCccHHHHHHHhcccc
Q 021659          178 LSDVGFFNSVR---------NYATMPHSSCPEDC--STQDCSNIIFQLGVLILELVT-GQSPEEGDVDLIQWIQESSISS  245 (309)
Q Consensus       178 l~dfg~~~~~~---------~~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~  245 (309)
                      |+|||++....         ...+++.|+|||..  ..+++++||||||+++|||++ |..||.+... .+...... .+
T Consensus       176 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~-~~~~~~i~-~~  253 (299)
T d1fgka_         176 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-EELFKLLK-EG  253 (299)
T ss_dssp             ECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-HHHHHHHH-TT
T ss_pred             eccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCH-HHHHHHHH-cC
Confidence            99999987443         23566789999964  445889999999999999998 6888875432 22222111 11


Q ss_pred             cccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcc
Q 021659          246 SIHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDI  298 (309)
Q Consensus       246 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~  298 (309)
                      .     .+..+...    ...+.+++.+||+.||++|||+.||++.|++++..
T Consensus       254 ~-----~~~~p~~~----~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a~  297 (299)
T d1fgka_         254 H-----RMDKPSNC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL  297 (299)
T ss_dssp             C-----CCCCCSSC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             C-----CCCCCccc----hHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhhc
Confidence            1     11111222    23566777799999999999999999999987643

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-44  Score=315.46  Aligned_cols=241  Identities=19%  Similarity=0.288  Sum_probs=189.0

Q ss_pred             ccccccCCCceEEEEEEc------CCcEEEEEEecccccc--HHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEee
Q 021659           43 HRIVYTNSHGAAYKARFQ------DGEVALVKEIQALNLE--KDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDN  113 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~~------~~~~va~K~~~~~~~~--~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~  113 (309)
                      .+.||+|+||.||+|.+.      ++..||+|++......  ...+.+|++++++++||||+++++++.. ...++||||
T Consensus        25 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~  104 (308)
T d1p4oa_          25 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL  104 (308)
T ss_dssp             EEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             eeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCceeEEEee
Confidence            368999999999999863      3578999999643322  3468999999999999999999998864 778899999


Q ss_pred             CCCCCHHHhhcC--------CCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccc
Q 021659          114 IENGSLKEHLND--------PLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFN  185 (309)
Q Consensus       114 ~~~~sL~~~i~~--------~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~  185 (309)
                      +++|+|.+++..        .....+++..+..++.+++.||.||   |+++++||||||+|||++.++++||+|||+++
T Consensus       105 ~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~L---H~~~ivHrDlk~~NiLld~~~~~Kl~DFGla~  181 (308)
T d1p4oa_         105 MTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYL---NANKFVHRDLAARNCMVAEDFTVKIGDFGMTR  181 (308)
T ss_dssp             CTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHH---HHTTCBCSCCSGGGEEECTTCCEEECCTTCCC
T ss_pred             cCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHH---hhCCeeeceEcCCceeecCCceEEEeecccce
Confidence            999999998853        1235678999999999999999999   77799999999999999999999999999987


Q ss_pred             ccc---------ccCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHhCC-CCCCCCccHHHHHHHhcccccccccccC
Q 021659          186 SVR---------NYATMPHSSCPEDC--STQDCSNIIFQLGVLILELVTGQ-SPEEGDVDLIQWIQESSISSSIHRMIDP  253 (309)
Q Consensus       186 ~~~---------~~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (309)
                      ...         ...+++.|++||..  ...+.++||||||+++|||+||. .||.+. ...+....... +..     +
T Consensus       182 ~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~-~~~~~~~~i~~-~~~-----~  254 (308)
T d1p4oa_         182 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL-SNEQVLRFVME-GGL-----L  254 (308)
T ss_dssp             GGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-CHHHHHHHHHT-TCC-----C
T ss_pred             eccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHh-CCC-----C
Confidence            543         22467889999963  33467899999999999999985 666543 33333322211 111     1


Q ss_pred             cCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhc
Q 021659          254 DLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVD  297 (309)
Q Consensus       254 ~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~  297 (309)
                      ..+...    ...+.+++.+||+.||+.|||+.+|++.|++.++
T Consensus       255 ~~p~~~----~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~  294 (308)
T d1p4oa_         255 DKPDNC----PDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  294 (308)
T ss_dssp             CCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             CCcccc----hHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            111122    2456677779999999999999999999997755

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-44  Score=312.38  Aligned_cols=225  Identities=17%  Similarity=0.232  Sum_probs=179.8

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEecccccc-------HHHHHHHHHHHccCC--CCCcceEeeeEeC-CeeEEEE
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQALNLE-------KDAFYREIQLLGRLH--HRHLLALQGFSTG-RKRLLVF  111 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~-------~~~~~~ei~~l~~l~--h~niv~~~~~~~~-~~~~lv~  111 (309)
                      .+.||+|+||.||+|+. .+++.||+|++......       ..++.+|+.++++++  ||||+++++++.+ ...++||
T Consensus         9 ~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~~lv~   88 (273)
T d1xwsa_           9 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLIL   88 (273)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEE
T ss_pred             eEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCeEEEEE
Confidence            36899999999999997 46899999998543211       234678999999996  8999999997765 7788999


Q ss_pred             eeCCC-CCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCC-CceeEeccccccccc-
Q 021659          112 DNIEN-GSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDEN-FTAKLSDVGFFNSVR-  188 (309)
Q Consensus       112 e~~~~-~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~-~~~kl~dfg~~~~~~-  188 (309)
                      ||+.+ +++.+++..  ...+++..+..++.|++.||.||   |+++|+||||||+||+++.+ +.+||+|||++.... 
T Consensus        89 e~~~~~~~l~~~~~~--~~~l~e~~~~~~~~qi~~al~~l---H~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~  163 (273)
T d1xwsa_          89 ERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHC---HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD  163 (273)
T ss_dssp             ECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCS
T ss_pred             EeccCcchHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHH---HHCCCccccCcccceEEecCCCeEEECccccceeccc
Confidence            99976 688888865  57799999999999999999999   78899999999999999854 799999999986443 


Q ss_pred             ----ccCCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCCH
Q 021659          189 ----NYATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYDS  261 (309)
Q Consensus       189 ----~~~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  261 (309)
                          ...||+.|+|||....   .+.++|||||||++|+|++|+.||.+...+.    ...          .......+ 
T Consensus       164 ~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~i~----~~~----------~~~~~~~s-  228 (273)
T d1xwsa_         164 TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII----RGQ----------VFFRQRVS-  228 (273)
T ss_dssp             SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH----HCC----------CCCSSCCC-
T ss_pred             ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchHHh----hcc----------cCCCCCCC-
Confidence                3468899999996432   2567899999999999999999998643211    100          01111122 


Q ss_pred             HHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          262 KELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       262 ~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                         .++.+++.+||++||++|||+.|+++
T Consensus       229 ---~~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         229 ---SECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             ---HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ---HHHHHHHHHHccCCHhHCcCHHHHhc
Confidence               34556666999999999999999986

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-43  Score=311.30  Aligned_cols=243  Identities=15%  Similarity=0.139  Sum_probs=179.2

Q ss_pred             cccccCCCceEEEEEE-cC-CcEEEEEEeccccc---cHHHHHHHHHHHccC---CCCCcceEeeeEeC------CeeEE
Q 021659           44 RIVYTNSHGAAYKARF-QD-GEVALVKEIQALNL---EKDAFYREIQLLGRL---HHRHLLALQGFSTG------RKRLL  109 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~-~~~va~K~~~~~~~---~~~~~~~ei~~l~~l---~h~niv~~~~~~~~------~~~~l  109 (309)
                      +.||+|+||+||+|+. .+ ++.||+|++.....   ....+.+|+++++.|   +||||+++++++..      ...++
T Consensus        13 ~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~~~~   92 (305)
T d1blxa_          13 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTL   92 (305)
T ss_dssp             EEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEE
T ss_pred             EEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccccCceEEE
Confidence            5899999999999997 34 67899999854322   233567788877766   79999999997631      35679


Q ss_pred             EEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc-
Q 021659          110 VFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR-  188 (309)
Q Consensus       110 v~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~-  188 (309)
                      ++||++++++...... ....+++..+..++.|++.||+||   |+++|+||||||+|||++.++.+||+|||++.... 
T Consensus        93 ~~e~~~~~~~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~yL---H~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~~~~  168 (305)
T d1blxa_          93 VFEHVDQDLTTYLDKV-PEPGVPTETIKDMMFQLLRGLDFL---HSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF  168 (305)
T ss_dssp             EEECCSCBHHHHHHHS-CTTCSCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCG
T ss_pred             EEEeccCCchhhhhhc-cCCCCCHHHHHHHHHHHHHHHHHH---HhCCEEecCCCccEEEEcCCCCeeecchhhhhhhcc
Confidence            9999998766544432 257799999999999999999999   77899999999999999999999999999986442 


Q ss_pred             -----ccCCCCCCCCCCCC--CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcc--ccccccc---------
Q 021659          189 -----NYATMPHSSCPEDC--STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSI--SSSIHRM---------  250 (309)
Q Consensus       189 -----~~~~~~~~~~PE~~--~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~--~~~~~~~---------  250 (309)
                           ...||+.|+|||..  ..++.++|||||||++|||++|+.||.+.............  ......+         
T Consensus       169 ~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  248 (305)
T d1blxa_         169 QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQ  248 (305)
T ss_dssp             GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGG
T ss_pred             cccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhh
Confidence                 45789999999964  33578999999999999999999999876544332221110  0000000         


Q ss_pred             c-cCcC---CCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          251 I-DPDL---GGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       251 ~-~~~l---~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      . ....   ...........+.+++.+||++||++|||+.|+++
T Consensus       249 ~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~  292 (305)
T d1blxa_         249 AFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  292 (305)
T ss_dssp             GSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             hhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            0 0000   00001111234556666999999999999999986

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-43  Score=313.32  Aligned_cols=241  Identities=17%  Similarity=0.226  Sum_probs=177.6

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEeeeEeC-------CeeEEEEeeCC
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQGFSTG-------RKRLLVFDNIE  115 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~~~~~-------~~~~lv~e~~~  115 (309)
                      ++||+|+||+||+|+.. +++.||+|++.....   ...+|+++|++++||||+++++++..       ...++||||++
T Consensus        26 k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~---~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~  102 (350)
T d1q5ka_          26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP  102 (350)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECCSS---SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEECCS
T ss_pred             eEEeeCcCeEEEEEEECCCCCEEEEEEECccch---HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEeccC
Confidence            57999999999999974 689999999965432   23479999999999999999997631       24679999998


Q ss_pred             CCCHHHhhc-CCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCC-ceeEeccccccccc-----
Q 021659          116 NGSLKEHLN-DPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENF-TAKLSDVGFFNSVR-----  188 (309)
Q Consensus       116 ~~sL~~~i~-~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~-~~kl~dfg~~~~~~-----  188 (309)
                      ++.+..... ......+++..+..++.|++.||+||   |+++|+||||||+|||++.++ .+||+|||++....     
T Consensus       103 ~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yL---H~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~~~  179 (350)
T d1q5ka_         103 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN  179 (350)
T ss_dssp             EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTTSCC
T ss_pred             CccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHH---HhcCCcccCCCcceEEEecCCCceeEecccchhhccCCccc
Confidence            754333321 11257899999999999999999999   788999999999999999875 89999999986543     


Q ss_pred             -ccCCCCCCCCCCCC---CCCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcc--------------c---ccc
Q 021659          189 -NYATMPHSSCPEDC---STQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSI--------------S---SSI  247 (309)
Q Consensus       189 -~~~~~~~~~~PE~~---~~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~--------------~---~~~  247 (309)
                       ...+++.|.|||..   ..++.++|||||||++|||++|+.||...............              .   ...
T Consensus       180 ~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~  259 (350)
T d1q5ka_         180 VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKF  259 (350)
T ss_dssp             CSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCC
T ss_pred             ccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccc
Confidence             34678899999953   34578999999999999999999999876543332211100              0   000


Q ss_pred             cccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          248 HRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       248 ~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      +.................++.+++.+||+.||++|||+.|+++
T Consensus       260 ~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  302 (350)
T d1q5ka_         260 PQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  302 (350)
T ss_dssp             CCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            0000000000001111234556666999999999999999995

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-42  Score=304.67  Aligned_cols=243  Identities=17%  Similarity=0.162  Sum_probs=182.7

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccc---ccHHHHHHHHHHHccCCCCCcceEeeeEeC---------CeeEEE
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALN---LEKDAFYREIQLLGRLHHRHLLALQGFSTG---------RKRLLV  110 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~---~~~~~~~~ei~~l~~l~h~niv~~~~~~~~---------~~~~lv  110 (309)
                      +.||+|+||+||+|+. .+|+.||+|++....   ...+.+.+|+++|++++||||+++++.+..         ...++|
T Consensus        16 ~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~~iv   95 (318)
T d3blha1          16 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLV   95 (318)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC----------CEEEE
T ss_pred             EEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccCceEEEE
Confidence            6899999999999997 578999999984332   234678899999999999999999996532         346899


Q ss_pred             EeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc--
Q 021659          111 FDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR--  188 (309)
Q Consensus       111 ~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~--  188 (309)
                      |||+.++.+......  ...+++..+..++.|++.||.||   |+.+|+||||||+||+++.++.+|++|||++....  
T Consensus        96 ~e~~~~~~~~~~~~~--~~~~~~~~~~~i~~qil~~l~~l---H~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~  170 (318)
T d3blha1          96 FDFCEHDLAGLLSNV--LVKFTLSEIKRVMQMLLNGLYYI---HRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLA  170 (318)
T ss_dssp             EECCCEEHHHHHTCT--TCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCC-
T ss_pred             EeccCCCccchhhhc--ccccccHHHHHHHHHHHHHHHHh---ccCCEEecCcCchheeecCCCcEEeeecceeeecccc
Confidence            999988776655544  57799999999999999999999   78899999999999999999999999999986443  


Q ss_pred             ---------ccCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcC-
Q 021659          189 ---------NYATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDL-  255 (309)
Q Consensus       189 ---------~~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l-  255 (309)
                               ...+|+.|.|||...   ..++++|||||||++|+|++|+.||.+..............+....-..... 
T Consensus       171 ~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  250 (318)
T d3blha1         171 KNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD  250 (318)
T ss_dssp             ----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCC
T ss_pred             cccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccc
Confidence                     235788999999642   4578999999999999999999999876544332221111111100000000 


Q ss_pred             ------------CCCCCHH-------HHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          256 ------------GGSYDSK-------ELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       256 ------------~~~~~~~-------~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                                  .......       ....+.+++.+||++||++|||+.|+++.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H  305 (318)
T d3blha1         251 NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  305 (318)
T ss_dssp             CC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             hhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence                        0001111       12345567789999999999999999864

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-43  Score=312.37  Aligned_cols=247  Identities=15%  Similarity=0.203  Sum_probs=181.5

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccccc---HHHHHHHHHHHccCCCCCcceEeeeEeCC-------eeEEEEe
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLE---KDAFYREIQLLGRLHHRHLLALQGFSTGR-------KRLLVFD  112 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~h~niv~~~~~~~~~-------~~~lv~e  112 (309)
                      +.||+|+||+||+|.. .+|+.||+|++......   .+.+.+|+++|++++||||+++++++...       ..|+|||
T Consensus        24 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e  103 (346)
T d1cm8a_          24 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMP  103 (346)
T ss_dssp             EEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEE
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceEEEEEe
Confidence            5799999999999997 46899999999643332   35688999999999999999999987532       4689999


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc----
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----  188 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----  188 (309)
                      |+ +.+|...+..   ..+++..+..++.|++.||.||   |+++|+||||||+|||++.++.+|++|||++....    
T Consensus       104 ~~-~~~l~~~~~~---~~l~~~~~~~~~~qi~~aL~~L---H~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~~~  176 (346)
T d1cm8a_         104 FM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYI---HAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMT  176 (346)
T ss_dssp             CC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSCC
T ss_pred             cc-cccHHHHHHh---ccccHHHHHHHHHHHHHHHHHH---HhCCCcccccCcchhhcccccccccccccceeccCCccc
Confidence            99 4588887763   6799999999999999999999   77899999999999999999999999999997554    


Q ss_pred             ccCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccc-------------------
Q 021659          189 NYATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSS-------------------  246 (309)
Q Consensus       189 ~~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~-------------------  246 (309)
                      ...+|+.|+|||...   ..+.++||||+||++|+|++|+.||.+..............+.                   
T Consensus       177 ~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (346)
T d1cm8a_         177 GYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMK  256 (346)
T ss_dssp             SSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHH
T ss_pred             cccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhc
Confidence            356788999999642   3478999999999999999999999876544332211110000                   


Q ss_pred             -ccccccCcCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHH--Hhhhhcc
Q 021659          247 -IHRMIDPDLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRY--LQNEVDI  298 (309)
Q Consensus       247 -~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~--L~~~~~~  298 (309)
                       ........+. .........+.+++.+||+.||+.|||+.|+++.  +++..+.
T Consensus       257 ~~~~~~~~~~~-~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~~~  310 (346)
T d1cm8a_         257 GLPELEKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDT  310 (346)
T ss_dssp             HSCCCCCCCGG-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC--
T ss_pred             cCCcccccchH-HhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCCCc
Confidence             0000000000 0001112345567779999999999999999964  6654433

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.2e-43  Score=311.02  Aligned_cols=242  Identities=16%  Similarity=0.160  Sum_probs=179.9

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc--cHHHHHHHHHHHccCCCCCcceEeeeEeCC-----eeEEEEeeCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL--EKDAFYREIQLLGRLHHRHLLALQGFSTGR-----KRLLVFDNIE  115 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~--~~~~~~~ei~~l~~l~h~niv~~~~~~~~~-----~~~lv~e~~~  115 (309)
                      +.||+|+||+||+|+. .+|+.||+|++.....  ..+.+.+|+++|++++||||+++++++...     ..+++++|+.
T Consensus        14 ~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~~~~~   93 (345)
T d1pmea_          14 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLM   93 (345)
T ss_dssp             EECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECC
T ss_pred             EEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEEEEeec
Confidence            6899999999999986 5789999999964332  245788999999999999999999977531     3356667788


Q ss_pred             CCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccc--------
Q 021659          116 NGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSV--------  187 (309)
Q Consensus       116 ~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~--------  187 (309)
                      +|+|.+++..   ..+++..+..++.|++.||+||   |+++|+||||||+|||++.++.+||+|||++...        
T Consensus        94 ~g~L~~~l~~---~~l~~~~i~~i~~qil~al~yL---H~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~~  167 (345)
T d1pmea_          94 GADLYKLLKT---QHLSNDHICYFLYQILRGLKYI---HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG  167 (345)
T ss_dssp             CEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCC
T ss_pred             CCchhhhhhc---CCCCHHHHHHHHHHHHHHHHHH---HHCCCcCCCCCcceEEECCCCCEEEcccCceeeccCCCccce
Confidence            9999999975   5699999999999999999999   7789999999999999999999999999998643        


Q ss_pred             --cccCCCCCCCCCCCCC---CCCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccccc-------------c
Q 021659          188 --RNYATMPHSSCPEDCS---TQDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIH-------------R  249 (309)
Q Consensus       188 --~~~~~~~~~~~PE~~~---~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~-------------~  249 (309)
                        ....+++.|.|||...   ..++++||||+||++|+|++|+.||....................             .
T Consensus       168 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (345)
T d1pmea_         168 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN  247 (345)
T ss_dssp             TTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHH
T ss_pred             eeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhc
Confidence              2335788999999642   236789999999999999999999986543322211110000000             0


Q ss_pred             c--ccCcCCCCCC----HHHHHHHHHHHHHccCCCCCCCCChHHHHHH
Q 021659          250 M--IDPDLGGSYD----SKELKKLLAVARLCIKTKDKPTISIPQISRY  291 (309)
Q Consensus       250 ~--~~~~l~~~~~----~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~  291 (309)
                      .  ..+.......    .....++.+++.+||+.||+.|||+.|+++.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         248 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             HHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             ccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            0  0000000000    0012346677779999999999999999964

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-42  Score=300.46  Aligned_cols=242  Identities=16%  Similarity=0.129  Sum_probs=184.7

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccc---cHHHHHHHHHHHccCCCCCcceEeeeEeC-CeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNL---EKDAFYREIQLLGRLHHRHLLALQGFSTG-RKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~---~~~~~~~ei~~l~~l~h~niv~~~~~~~~-~~~~lv~e~~~~~s  118 (309)
                      +.||+|+||+||+|+. .+++.||+|++.....   ..+.+.+|+.++++++||||+++++++.+ ...+++++++.+++
T Consensus         8 ~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~~~~~~   87 (292)
T d1unla_           8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDL   87 (292)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSEEH
T ss_pred             eEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEeeeccccc
Confidence            6899999999999997 5689999999854332   24678999999999999999999997765 67789999999999


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEecccccccccc-------cC
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVRN-------YA  191 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~~-------~~  191 (309)
                      +..++..  .+.+++..+..++.|++.||+||   |+++|+||||||+||+++.++.+|++|||.+.....       ..
T Consensus        88 l~~~~~~--~~~~~~~~~~~~~~q~~~aL~~l---H~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~~~~  162 (292)
T d1unla_          88 KKYFDSC--NGDLDPEIVKSFLFQLLKGLGFC---HSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEV  162 (292)
T ss_dssp             HHHHHHT--TTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCCSCC
T ss_pred             ccccccc--ccccchhHHHHHHHHHHHHHHHh---hcCCEeeecccCcccccccCCceeeeecchhhcccCCCccceeec
Confidence            9888876  67889999999999999999999   778999999999999999999999999999875432       23


Q ss_pred             CCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccccc------c---ccccc----CcC
Q 021659          192 TMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSS------I---HRMID----PDL  255 (309)
Q Consensus       192 ~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~------~---~~~~~----~~l  255 (309)
                      ++..|.+||....   .+.++|||||||++++|++|+.||....+.............      .   ....+    +..
T Consensus       163 ~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (292)
T d1unla_         163 VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMY  242 (292)
T ss_dssp             SCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCC
T ss_pred             cccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccc
Confidence            4566778885332   478899999999999999999997655444433322111000      0   00000    000


Q ss_pred             -----CCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          256 -----GGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       256 -----~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                           ...........+.+++.+||++||++|||+.|+++
T Consensus       243 ~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         243 PATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             CTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             cccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                 00011111244556677999999999999999986

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.2e-42  Score=304.46  Aligned_cols=248  Identities=15%  Similarity=0.132  Sum_probs=180.5

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCcceEee-eEe-CCeeEEEEeeCCCCCH
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHLLALQG-FST-GRKRLLVFDNIENGSL  119 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~niv~~~~-~~~-~~~~~lv~e~~~~~sL  119 (309)
                      .+.||+|+||.||+|++ .+++.||+|++.... ..+++..|++++++++|+|++..+. +.. ....++||||+.+ ++
T Consensus        12 ~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~~~-~l   89 (299)
T d1ckia_          12 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGP-SL   89 (299)
T ss_dssp             EEEEEECSSSEEEEEEETTTTEEEEEEEEESCT-TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECCCC-BH
T ss_pred             eEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc-cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEcCC-ch
Confidence            36899999999999997 568999999875433 3346889999999998877666655 333 3677789999855 66


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC---CCceeEeccccccccc--------
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE---NFTAKLSDVGFFNSVR--------  188 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~---~~~~kl~dfg~~~~~~--------  188 (309)
                      .+.+... ...+++..+..++.|++.||+||   |+++|+||||||+||+++.   +..+|++|||+++...        
T Consensus        90 ~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l---H~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~  165 (299)
T d1ckia_          90 EDLFNFC-SRKFSLKTVLLLADQMISRIEYI---HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHI  165 (299)
T ss_dssp             HHHHHHT-TTCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBC
T ss_pred             hhhhhhc-cCCCcHHHHHHHHHHHHHHHHHH---HHCCeeeccCCHhhccccccCCCceeeeeccCcceeccccccccce
Confidence            6655432 46799999999999999999999   7789999999999999864   4569999999987542        


Q ss_pred             ------ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccccccCcCCCCCC
Q 021659          189 ------NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHRMIDPDLGGSYD  260 (309)
Q Consensus       189 ------~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  260 (309)
                            ...||+.|+|||...+  .++++|||||||++|||+||+.||........................+.+.... 
T Consensus       166 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  244 (299)
T d1ckia_         166 PYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGY-  244 (299)
T ss_dssp             CCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTS-
T ss_pred             eccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCC-
Confidence                  2358899999997544  5789999999999999999999997543221111000000000000001111111 


Q ss_pred             HHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcccc
Q 021659          261 SKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQC  300 (309)
Q Consensus       261 ~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~  300 (309)
                         ...+.+++.+||..+|++||++.++.+.|+.....+.
T Consensus       245 ---p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~~~  281 (299)
T d1ckia_         245 ---PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG  281 (299)
T ss_dssp             ---CHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred             ---CHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHHcC
Confidence               2345566669999999999999999988887765443

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=1.5e-41  Score=301.24  Aligned_cols=237  Identities=16%  Similarity=0.211  Sum_probs=179.7

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccCC-CCCcceEeeeEeC---CeeEEEEeeCCCCC
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRLH-HRHLLALQGFSTG---RKRLLVFDNIENGS  118 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~-h~niv~~~~~~~~---~~~~lv~e~~~~~s  118 (309)
                      +.||+|+||+||+|+. .+++.||+|++...  ..+++.+|+++|++++ ||||+++++++..   ...++||||+.+++
T Consensus        41 ~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~--~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~  118 (328)
T d3bqca1          41 RKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD  118 (328)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECSS--CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECCCSCB
T ss_pred             EEEecCcCeEEEEEEECCCCCEEEEEEECHH--HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEeecCCCc
Confidence            5899999999999997 56899999998643  3567899999999995 9999999997752   46789999999999


Q ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCC-ceeEeccccccccc------ccC
Q 021659          119 LKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENF-TAKLSDVGFFNSVR------NYA  191 (309)
Q Consensus       119 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~-~~kl~dfg~~~~~~------~~~  191 (309)
                      |....     +.+++..+..++.|++.||.||   |+++|+||||||+|||++.++ .+|++|||++....      ...
T Consensus       119 L~~~~-----~~l~e~~i~~i~~qil~aL~~L---H~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~~~~  190 (328)
T d3bqca1         119 FKQLY-----QTLTDYDIRFYMYEILKALDYC---HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV  190 (328)
T ss_dssp             GGGTT-----TSCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCCSCC
T ss_pred             HHHHh-----cCCCHHHHHHHHHHHHHHHHHH---hhcccccccccccceEEcCCCCeeeecccccceeccCCCcccccc
Confidence            98764     4599999999999999999999   788999999999999998654 69999999986543      335


Q ss_pred             CCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHh----------------ccc--cccccc
Q 021659          192 TMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQES----------------SIS--SSIHRM  250 (309)
Q Consensus       192 ~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~----------------~~~--~~~~~~  250 (309)
                      +|+.|.|||....   .+.++|+||+||++++|++|+.||.............                ...  ......
T Consensus       191 ~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~  270 (328)
T d3bqca1         191 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI  270 (328)
T ss_dssp             SCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGT
T ss_pred             cCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchh
Confidence            7788999996433   4788999999999999999999997654322111000                000  000000


Q ss_pred             ccCc--------CCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          251 IDPD--------LGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       251 ~~~~--------l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                      ....        ...........++.+++.+||++||++|||+.|+++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         271 LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             CCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            0000        000000111244566777999999999999999986

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=9.5e-42  Score=297.71  Aligned_cols=251  Identities=14%  Similarity=0.130  Sum_probs=189.5

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccCCC-CCcceEeeeEeC-CeeEEEEeeCCCCCH
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRLHH-RHLLALQGFSTG-RKRLLVFDNIENGSL  119 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h-~niv~~~~~~~~-~~~~lv~e~~~~~sL  119 (309)
                      .+.||+|+||+||+|+. .+++.||+|++.... ..+.+.+|++.++.|+| +|++.+++++.. ...++||||+ +++|
T Consensus        10 ~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~-~~~l   87 (293)
T d1csna_          10 GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSL   87 (293)
T ss_dssp             EEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred             EEEEecCCCeEEEEEEECCCCCEEEEEEEcccc-CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec-CCCH
Confidence            46899999999999997 468999999875332 33457889999999965 899999997654 6778999998 5699


Q ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCC-----CCceeEeccccccccc------
Q 021659          120 KEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDE-----NFTAKLSDVGFFNSVR------  188 (309)
Q Consensus       120 ~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~-----~~~~kl~dfg~~~~~~------  188 (309)
                      .+++... ...++..++..++.|++.||.||   |+++|+||||||+||+++.     ++.+||+|||+++...      
T Consensus        88 ~~~~~~~-~~~~~~~~~~~i~~q~~~~l~~l---H~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~  163 (293)
T d1csna_          88 EDLLDLC-GRKFSVKTVAMAAKQMLARVQSI---HEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQ  163 (293)
T ss_dssp             HHHHHHT-TTCCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCC
T ss_pred             HHHHHhh-ccchhhHHHHHHHHHHHHHHHHH---HHCCceeccCCccceeecCcccccCCceEEcccceeEEcccCcccc
Confidence            9988642 45799999999999999999999   8899999999999999974     5679999999997542      


Q ss_pred             --------ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCcc--HHHH---HHHhcccccccccccC
Q 021659          189 --------NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVD--LIQW---IQESSISSSIHRMIDP  253 (309)
Q Consensus       189 --------~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~--~~~~---~~~~~~~~~~~~~~~~  253 (309)
                              ...||+.|+|||...+  .++++||||||+++|||+||+.||.+...  ....   +..........     
T Consensus       164 ~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~-----  238 (293)
T d1csna_         164 HIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLR-----  238 (293)
T ss_dssp             BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHH-----
T ss_pred             ceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChH-----
Confidence                    2358999999996543  47889999999999999999999975422  1111   11111111111     


Q ss_pred             cCCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHHHhhhhcccccc-cccccc
Q 021659          254 DLGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRYLQNEVDIQCYK-YSRVSF  308 (309)
Q Consensus       254 ~l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~L~~~~~~~~~~-~~~~~~  308 (309)
                      .+....+    .++.+++..|+..+|++||+.+.+.+.|+++++-.... ....||
T Consensus       239 ~l~~~~p----~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~~~~~~~~~~Dw  290 (293)
T d1csna_         239 ELCAGFP----EEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDW  290 (293)
T ss_dssp             HHTTTSC----HHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCSCSCCGG
T ss_pred             HhcCCCC----HHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence            1111122    34566666999999999999999988888765443333 334566

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-42  Score=305.38  Aligned_cols=233  Identities=21%  Similarity=0.252  Sum_probs=181.7

Q ss_pred             ccccccCCCceEEEEEE----cCCcEEEEEEecccc-----ccHHHHHHHHHHHccCCC-CCcceEeeeEe-CCeeEEEE
Q 021659           43 HRIVYTNSHGAAYKARF----QDGEVALVKEIQALN-----LEKDAFYREIQLLGRLHH-RHLLALQGFST-GRKRLLVF  111 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~----~~~~~va~K~~~~~~-----~~~~~~~~ei~~l~~l~h-~niv~~~~~~~-~~~~~lv~  111 (309)
                      .+.||+|+||+||+|+.    .+|+.||+|.+....     ...+.+.+|++++++++| |||+++++++. ....+++|
T Consensus        29 ~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~~~v~  108 (322)
T d1vzoa_          29 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLIL  108 (322)
T ss_dssp             EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEE
T ss_pred             EEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCceeeee
Confidence            36899999999999985    247899999985322     234578899999999976 89999999765 57888999


Q ss_pred             eeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc---
Q 021659          112 DNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR---  188 (309)
Q Consensus       112 e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~---  188 (309)
                      ||+.+|+|.+++..  ...+++..+..++.|++.||.||   |+.+++||||||+||+++.++.+||+|||++....   
T Consensus       109 e~~~~~~L~~~i~~--~~~~~e~~~~~~~~Qi~~al~~l---H~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~  183 (322)
T d1vzoa_         109 DYINGGELFTHLSQ--RERFTEHEVQIYVGEIVLALEHL---HKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE  183 (322)
T ss_dssp             CCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGG
T ss_pred             ecccccHHHHHHHh--cccccHHHHHHHHHHHHHHHHHh---hcCCEEeccCCccceeecCCCCEEEeeccchhhhcccc
Confidence            99999999999976  56788999999999999999999   77899999999999999999999999999986442   


Q ss_pred             -----ccCCCCCCCCCCCCCC----CCCCCcEeehhhHHHHHHhCCCCCCCCc--cHHHHHHHhcccccccccccCcCCC
Q 021659          189 -----NYATMPHSSCPEDCST----QDCSNIIFQLGVLILELVTGQSPEEGDV--DLIQWIQESSISSSIHRMIDPDLGG  257 (309)
Q Consensus       189 -----~~~~~~~~~~PE~~~~----~~~~~Dv~slG~~l~~l~tg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~  257 (309)
                           ...+++.|.+||....    .+.++|||||||++|+|++|+.||.+..  .....+.......      .+..+.
T Consensus       184 ~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~------~~~~~~  257 (322)
T d1vzoa_         184 TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKS------EPPYPQ  257 (322)
T ss_dssp             GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHC------CCCCCT
T ss_pred             cccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccC------CCCCcc
Confidence                 3467889999996432    3678999999999999999999997542  2211111111100      111111


Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCCCC-----hHHHHH
Q 021659          258 SYDSKELKKLLAVARLCIKTKDKPTIS-----IPQISR  290 (309)
Q Consensus       258 ~~~~~~~~~l~~l~~~cl~~dp~~Rps-----~~evl~  290 (309)
                      . .   ...+.+++.+||++||++|||     ++|+++
T Consensus       258 ~-~---s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         258 E-M---SALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             T-S---CHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             c-C---CHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence            1 1   244556666999999999995     788875

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9e-42  Score=304.98  Aligned_cols=248  Identities=16%  Similarity=0.180  Sum_probs=183.7

Q ss_pred             cccccCCCceEEEEEE-cCCcEEEEEEecccccc---HHHHHHHHHHHccCCCCCcceEeeeEeC------CeeEEEEee
Q 021659           44 RIVYTNSHGAAYKARF-QDGEVALVKEIQALNLE---KDAFYREIQLLGRLHHRHLLALQGFSTG------RKRLLVFDN  113 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~h~niv~~~~~~~~------~~~~lv~e~  113 (309)
                      +.||+|+||+||+|+. .+|+.||+|++.....+   .+.+.+|+++|++++||||+++++++..      ...+++++|
T Consensus        24 ~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~i~~~  103 (348)
T d2gfsa1          24 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH  103 (348)
T ss_dssp             EECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCCEEEEE
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceEEEEEe
Confidence            5899999999999996 56899999999654333   3568899999999999999999997642      344677888


Q ss_pred             CCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc----c
Q 021659          114 IENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----N  189 (309)
Q Consensus       114 ~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----~  189 (309)
                      +.+|+|.+++..   ..+++..+..++.|++.||+||   |+++|+||||||+||+++.++.+|++|||++....    .
T Consensus       104 ~~gg~L~~~~~~---~~l~e~~~~~i~~qil~aL~~L---H~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~~~~  177 (348)
T d2gfsa1         104 LMGADLNNIVKC---QKLTDDHVQFLIYQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG  177 (348)
T ss_dssp             CCSEEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTCCEEECCC----CCTGGGSS
T ss_pred             ecCCchhhhccc---ccccHHHHHHHHHHHHHHHHHH---HhCCCcccccCCccccccccccccccccchhcccCccccc
Confidence            899999999964   5799999999999999999999   77899999999999999999999999999986543    3


Q ss_pred             cCCCCCCCCCCCCCC---CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhcccccccc-c------------cc-
Q 021659          190 YATMPHSSCPEDCST---QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSISSSIHR-M------------ID-  252 (309)
Q Consensus       190 ~~~~~~~~~PE~~~~---~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~------------~~-  252 (309)
                      ..+++.|+|||....   .+.++|||||||++|+|++|+.||.+................... .            .. 
T Consensus       178 ~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (348)
T d2gfsa1         178 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS  257 (348)
T ss_dssp             SCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTT
T ss_pred             ccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhh
Confidence            356678999996332   378999999999999999999999876543322211111000000 0            00 


Q ss_pred             -CcCCCCC----CHHHHHHHHHHHHHccCCCCCCCCChHHHHH--HHhhhhc
Q 021659          253 -PDLGGSY----DSKELKKLLAVARLCIKTKDKPTISIPQISR--YLQNEVD  297 (309)
Q Consensus       253 -~~l~~~~----~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~--~L~~~~~  297 (309)
                       +......    .......+.+++.+||+.||++|||+.|+++  .+++..+
T Consensus       258 ~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~~  309 (348)
T d2gfsa1         258 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD  309 (348)
T ss_dssp             SCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred             cccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCCC
Confidence             0000000    0011234556777999999999999999997  5664443

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-41  Score=300.65  Aligned_cols=239  Identities=14%  Similarity=0.167  Sum_probs=176.7

Q ss_pred             cccccCCCceEEEEEEc-CCcEEEEEEecccccc---HHHHHHHHHHHccCCCCCcceEeeeEe-------CCeeEEEEe
Q 021659           44 RIVYTNSHGAAYKARFQ-DGEVALVKEIQALNLE---KDAFYREIQLLGRLHHRHLLALQGFST-------GRKRLLVFD  112 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~-~~~~va~K~~~~~~~~---~~~~~~ei~~l~~l~h~niv~~~~~~~-------~~~~~lv~e  112 (309)
                      +.||+|+||+||+|.+. +|+.||+|++.....+   ..++.+|+.++++++||||+++++++.       ....|+|||
T Consensus        23 ~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~iv~E  102 (355)
T d2b1pa1          23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME  102 (355)
T ss_dssp             EECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEE
T ss_pred             EEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeEEEEe
Confidence            58999999999999974 6899999999654333   346889999999999999999999763       256789999


Q ss_pred             eCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccccccccc----
Q 021659          113 NIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVGFFNSVR----  188 (309)
Q Consensus       113 ~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~~~~----  188 (309)
                      |+.++.+. .+.    ..+++..+..++.|++.||.||   |+.||+||||||+||+++.++.+|++|||+++...    
T Consensus       103 y~~~~l~~-~~~----~~~~~~~i~~~~~qil~gl~~L---H~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~~  174 (355)
T d2b1pa1         103 LMDANLCQ-VIQ----MELDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM  174 (355)
T ss_dssp             CCSEEHHH-HHT----SCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred             ccchHHHH-hhh----cCCCHHHHHHHHHHHHHHHHHh---hhcccccccCCccccccccccceeeechhhhhccccccc
Confidence            99875554 443    4589999999999999999999   77899999999999999999999999999876443    


Q ss_pred             --ccCCCCCCCCCCCCCC--CCCCCcEeehhhHHHHHHhCCCCCCCCccHHHHHHHhccc-c------------------
Q 021659          189 --NYATMPHSSCPEDCST--QDCSNIIFQLGVLILELVTGQSPEEGDVDLIQWIQESSIS-S------------------  245 (309)
Q Consensus       189 --~~~~~~~~~~PE~~~~--~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~-~------------------  245 (309)
                        ...+|+.|+|||...+  .++++||||+||++++|++|+.||.+.............. .                  
T Consensus       175 ~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  254 (355)
T d2b1pa1         175 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE  254 (355)
T ss_dssp             ------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHH
T ss_pred             cccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhh
Confidence              3468899999997443  4789999999999999999999998665433221110000 0                  


Q ss_pred             --------cccccccCcCCCC---CCHHHHHHHHHHHHHccCCCCCCCCChHHHHH
Q 021659          246 --------SIHRMIDPDLGGS---YDSKELKKLLAVARLCIKTKDKPTISIPQISR  290 (309)
Q Consensus       246 --------~~~~~~~~~l~~~---~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~  290 (309)
                              .............   ........+.+++.+||++||++|||+.|+++
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~  310 (355)
T d2b1pa1         255 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  310 (355)
T ss_dssp             TSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             cCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence                    0000010111111   11223567788888999999999999999984

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.5e-36  Score=270.77  Aligned_cols=260  Identities=16%  Similarity=0.136  Sum_probs=183.9

Q ss_pred             ccccccCCCceEEEEEE-cCCcEEEEEEeccccccHHHHHHHHHHHccCC-----------CCCcceEeeeEeC---Cee
Q 021659           43 HRIVYTNSHGAAYKARF-QDGEVALVKEIQALNLEKDAFYREIQLLGRLH-----------HRHLLALQGFSTG---RKR  107 (309)
Q Consensus        43 ~~~lg~G~~~~v~~~~~-~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~-----------h~niv~~~~~~~~---~~~  107 (309)
                      .+.||+|+||+||+|+. .+|+.||+|++.......+.+.+|+.+++.++           |+||+++++++..   ...
T Consensus        18 ~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~   97 (362)
T d1q8ya_          18 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGV   97 (362)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEE
T ss_pred             EEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeeccccce
Confidence            47899999999999997 56899999999766555677889999988775           4788889886542   445


Q ss_pred             EEEEeeCCCC-CHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCC------ceeEec
Q 021659          108 LLVFDNIENG-SLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENF------TAKLSD  180 (309)
Q Consensus       108 ~lv~e~~~~~-sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~------~~kl~d  180 (309)
                      +++++++..+ +............+++..+..++.|++.||.|||  +..+|+||||||+|||++.++      .++++|
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh--~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~d  175 (362)
T d1q8ya_          98 HVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH--RRCGIIHTDIKPENVLMEIVDSPENLIQIKIAD  175 (362)
T ss_dssp             EEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH--HTTCEECSCCSGGGEEEEEEETTTTEEEEEECC
T ss_pred             eeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHh--hhcCcccccCChhHeeeeccCcccccceeeEee
Confidence            5666665443 3333333333678899999999999999999995  358999999999999997654      389999


Q ss_pred             cccccccc----ccCCCCCCCCCCCCC--CCCCCCcEeehhhHHHHHHhCCCCCCCCccH------HHHHHHhcccc---
Q 021659          181 VGFFNSVR----NYATMPHSSCPEDCS--TQDCSNIIFQLGVLILELVTGQSPEEGDVDL------IQWIQESSISS---  245 (309)
Q Consensus       181 fg~~~~~~----~~~~~~~~~~PE~~~--~~~~~~Dv~slG~~l~~l~tg~~p~~~~~~~------~~~~~~~~~~~---  245 (309)
                      ||.+....    ...+|+.|+|||...  ..+.++|+||+||++++|++|+.||......      .........-+   
T Consensus       176 fg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~  255 (362)
T d1q8ya_         176 LGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELP  255 (362)
T ss_dssp             CTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCC
T ss_pred             cccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCC
Confidence            99986443    346788999999643  3478899999999999999999999744211      00000000000   


Q ss_pred             -----------------cccccccCc----------CCCCCCHHHHHHHHHHHHHccCCCCCCCCChHHHHHH--Hhhhh
Q 021659          246 -----------------SIHRMIDPD----------LGGSYDSKELKKLLAVARLCIKTKDKPTISIPQISRY--LQNEV  296 (309)
Q Consensus       246 -----------------~~~~~~~~~----------l~~~~~~~~~~~l~~l~~~cl~~dp~~Rps~~evl~~--L~~~~  296 (309)
                                       .....+...          ............+.+++.+||++||.+|||+.|+++.  +++..
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~~  335 (362)
T d1q8ya_         256 SYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL  335 (362)
T ss_dssp             HHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred             HHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCCC
Confidence                             000000000          0112345567788889999999999999999999973  66555


Q ss_pred             cccccccc
Q 021659          297 DIQCYKYS  304 (309)
Q Consensus       297 ~~~~~~~~  304 (309)
                      ..+....|
T Consensus       336 ~~~~~~~p  343 (362)
T d1q8ya_         336 GMEEIRVP  343 (362)
T ss_dssp             TCTTCCCT
T ss_pred             CcccCCCC
Confidence            55444433

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.85  E-value=9.9e-22  Score=159.48  Aligned_cols=131  Identities=9%  Similarity=0.047  Sum_probs=102.9

Q ss_pred             cccccccCCCceEEEEEEcCCcEEEEEEecccccc-------------------HHHHHHHHHHHccCCCCCcceEeeeE
Q 021659           42 FHRIVYTNSHGAAYKARFQDGEVALVKEIQALNLE-------------------KDAFYREIQLLGRLHHRHLLALQGFS  102 (309)
Q Consensus        42 ~~~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~-------------------~~~~~~ei~~l~~l~h~niv~~~~~~  102 (309)
                      ..+.||+|+||.||+|...+|+.||+|++......                   ......|...+.++.|.+++..+++.
T Consensus         4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~   83 (191)
T d1zara2           4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE   83 (191)
T ss_dssp             EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred             hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence            44789999999999999888999999987432110                   12345688889999999999888764


Q ss_pred             eCCeeEEEEeeCCCCCHHHhhcCCCCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCeeecccCCCceeeCCCCceeEeccc
Q 021659          103 TGRKRLLVFDNIENGSLKEHLNDPLKTPLDWKTRLQIAIGVAAALEYLLLFSNLPMYYVSISSSSIMLDENFTAKLSDVG  182 (309)
Q Consensus       103 ~~~~~~lv~e~~~~~sL~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~h~~~i~H~dl~p~nill~~~~~~kl~dfg  182 (309)
                      .   .+++|||+++..+.+.         +...+..++.+++.++.+|   |..+++||||||+|||++.+ .++++|||
T Consensus        84 ~---~~lvme~~~~~~~~~l---------~~~~~~~i~~ql~~~l~~l---H~~giiHrDiKP~NILv~~~-~~~liDFG  147 (191)
T d1zara2          84 G---NAVLMELIDAKELYRV---------RVENPDEVLDMILEEVAKF---YHRGIVHGDLSQYNVLVSEE-GIWIIDFP  147 (191)
T ss_dssp             T---TEEEEECCCCEEGGGC---------CCSCHHHHHHHHHHHHHHH---HHTTEECSCCSTTSEEEETT-EEEECCCT
T ss_pred             C---CEEEEEeeccccccch---------hhHHHHHHHHHHHHHHHHH---hhCCEEEccCChhheeeeCC-CEEEEECC
Confidence            3   3789999988665442         2334567899999999999   77899999999999999865 58999999


Q ss_pred             cccccc
Q 021659          183 FFNSVR  188 (309)
Q Consensus       183 ~~~~~~  188 (309)
                      ++....
T Consensus       148 ~a~~~~  153 (191)
T d1zara2         148 QSVEVG  153 (191)
T ss_dssp             TCEETT
T ss_pred             CcccCC
Confidence            986543

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.39  E-value=1.3e-06  Score=72.10  Aligned_cols=129  Identities=14%  Similarity=0.081  Sum_probs=80.9

Q ss_pred             CCCceEEEEEEcCCcEEEEEEeccc-cccHHHHHHHHHHHccCC-CCCcceEeeeEe-CCeeEEEEeeCCCCCHHHhhcC
Q 021659           49 NSHGAAYKARFQDGEVALVKEIQAL-NLEKDAFYREIQLLGRLH-HRHLLALQGFST-GRKRLLVFDNIENGSLKEHLND  125 (309)
Q Consensus        49 G~~~~v~~~~~~~~~~va~K~~~~~-~~~~~~~~~ei~~l~~l~-h~niv~~~~~~~-~~~~~lv~e~~~~~sL~~~i~~  125 (309)
                      ++.+.||+....++ .+++|..... ......+.+|...+..|. +-.+..++.+.. ++..++||++++|.++.+....
T Consensus        25 ~s~~~v~rv~~~~~-~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~~~~  103 (263)
T d1j7la_          25 MSPAKVYKLVGENE-NLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYED  103 (263)
T ss_dssp             CSSSEEEEEECSSC-EEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHTTT
T ss_pred             CCCCcEEEEEeCCC-eEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEecccccccccccc
Confidence            34468999875444 4556766432 223345778888887774 333556676654 4678899999999888665432


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHhhhhhc----------------------------------------------------
Q 021659          126 PLKTPLDWKTRLQIAIGVAAALEYLLLF----------------------------------------------------  153 (309)
Q Consensus       126 ~~~~~l~~~~~~~i~~~i~~~l~~lh~~----------------------------------------------------  153 (309)
                      .    ..   ...++.++.+.+..||..                                                    
T Consensus       104 ~----~~---~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  176 (263)
T d1j7la_         104 E----QS---PEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKT  176 (263)
T ss_dssp             C----SC---HHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSSHHHHHHHHHH
T ss_pred             c----cc---HHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchHHHHHHHHHHh
Confidence            1    11   122233333344444321                                                    


Q ss_pred             ----CCCCeeecccCCCceeeCCCCceeEecccccc
Q 021659          154 ----SNLPMYYVSISSSSIMLDENFTAKLSDVGFFN  185 (309)
Q Consensus       154 ----h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~  185 (309)
                          ....++|||+.|.||+++.++.+-|+||+.+.
T Consensus       177 ~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T d1j7la_         177 EKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             SCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             cCCcCCcEEEEeeccCcceeecCCceEEEeechhcc
Confidence                12347899999999999877666799998764

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=98.00  E-value=1.3e-05  Score=65.52  Aligned_cols=74  Identities=16%  Similarity=0.100  Sum_probs=50.0

Q ss_pred             ccccCC-CceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCC--CCCcceEeeeEeC-CeeEEEEeeCCCCCHH
Q 021659           45 IVYTNS-HGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLH--HRHLLALQGFSTG-RKRLLVFDNIENGSLK  120 (309)
Q Consensus        45 ~lg~G~-~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~--h~niv~~~~~~~~-~~~~lv~e~~~~~sL~  120 (309)
                      .+..|. .+.||+....++..+++|......  ...+..|+..++.|.  .-.+.+++.++.+ ...++||++++|.++.
T Consensus        17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~--~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~   94 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA--LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL   94 (255)
T ss_dssp             ECSCTTSSCEEEEEECTTSCCEEEEEECSCT--TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred             EcCCcccCCeEEEEEeCCCCEEEEEeCCccC--HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeeccccc
Confidence            344454 367899988777778888764332  235777888887774  2335667776654 5678999999886553

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=97.78  E-value=4.2e-05  Score=66.91  Aligned_cols=74  Identities=12%  Similarity=0.055  Sum_probs=46.9

Q ss_pred             cccccCCCceEEEEEEcC-CcEEEEEEecc--------ccccHHHHHHHHHHHccCC-C--CCcceEeeeEeCCeeEEEE
Q 021659           44 RIVYTNSHGAAYKARFQD-GEVALVKEIQA--------LNLEKDAFYREIQLLGRLH-H--RHLLALQGFSTGRKRLLVF  111 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~-~~~va~K~~~~--------~~~~~~~~~~ei~~l~~l~-h--~niv~~~~~~~~~~~~lv~  111 (309)
                      +.||.|..+.||++...+ ++.+++|.-..        -.....+...|.+.|+.+. +  ..+.+++.+. ....++||
T Consensus        32 ~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d-~~~~~lvm  110 (392)
T d2pula1          32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD-TEMAVTVM  110 (392)
T ss_dssp             EECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE-TTTTEEEE
T ss_pred             EEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEc-CCCCEEEE
Confidence            468999999999998654 56788885421        1122345566888887663 2  3345555544 45567899


Q ss_pred             eeCCCCC
Q 021659          112 DNIENGS  118 (309)
Q Consensus       112 e~~~~~s  118 (309)
                      |++++..
T Consensus       111 E~L~~~~  117 (392)
T d2pula1         111 EDLSHLK  117 (392)
T ss_dssp             CCCTTSE
T ss_pred             eccCCcc
Confidence            9997643

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=97.23  E-value=0.00099  Score=56.24  Aligned_cols=133  Identities=14%  Similarity=0.116  Sum_probs=77.3

Q ss_pred             CceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCCCCc--c---eEee---eEeCCeeEEEEeeCCCCCHH--
Q 021659           51 HGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHHRHL--L---ALQG---FSTGRKRLLVFDNIENGSLK--  120 (309)
Q Consensus        51 ~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h~ni--v---~~~~---~~~~~~~~lv~e~~~~~sL~--  120 (309)
                      -..||++..++|..+++|+-....-+.+++..|+..+..|....+  +   ..-+   +..+...+.++++++|..+.  
T Consensus        35 EN~vy~v~~~dg~~~VlK~~rp~~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~~~~~  114 (325)
T d1zyla1          35 ENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEAD  114 (325)
T ss_dssp             SSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEECCSS
T ss_pred             cceeEEEEcCCCCEEEEEEeCCCCCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcCCCCC
Confidence            468999999899989999875555566778889988887742211  1   2211   22345677889998763221  


Q ss_pred             ---H------hh-------cCC---CCCCCCHH----------------------HHHHHHHHHHHHHhhhh-hcCCCCe
Q 021659          121 ---E------HL-------NDP---LKTPLDWK----------------------TRLQIAIGVAAALEYLL-LFSNLPM  158 (309)
Q Consensus       121 ---~------~i-------~~~---~~~~l~~~----------------------~~~~i~~~i~~~l~~lh-~~h~~~i  158 (309)
                         .      .+       ...   .....+..                      .....+..+...+.-.- ..-..++
T Consensus       115 ~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~l  194 (325)
T d1zyla1         115 NIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLR  194 (325)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEE
T ss_pred             CHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccccCCcee
Confidence               1      00       100   01111111                      11222333333332221 1124678


Q ss_pred             eecccCCCceeeCCCCceeEecccccc
Q 021659          159 YYVSISSSSIMLDENFTAKLSDVGFFN  185 (309)
Q Consensus       159 ~H~dl~p~nill~~~~~~kl~dfg~~~  185 (309)
                      +|||+.|.||+++++  ..++||+.+.
T Consensus       195 iHgDlh~~NvL~~~~--~~~IDFdd~~  219 (325)
T d1zyla1         195 LHGDCHAGNILWRDG--PMFVDLDDAR  219 (325)
T ss_dssp             CCSSCSGGGEEESSS--EEECCCTTCC
T ss_pred             ecCCCCcccEEEeCC--ceEEechhcc
Confidence            999999999999743  4588998765

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.13  E-value=0.001  Score=55.78  Aligned_cols=155  Identities=9%  Similarity=0.025  Sum_probs=79.9

Q ss_pred             ccCHHHHHHhhcccc-------cccccCCCceEEEEEEcCCcEEEEEEeccccccHHHHHHHHHHHccCCC-----CCcc
Q 021659           29 RFSYKDIKMATDGFH-------RIVYTNSHGAAYKARFQDGEVALVKEIQALNLEKDAFYREIQLLGRLHH-----RHLL   96 (309)
Q Consensus        29 ~~~~~~i~~~~~~~~-------~~lg~G~~~~v~~~~~~~~~~va~K~~~~~~~~~~~~~~ei~~l~~l~h-----~niv   96 (309)
                      .++-+++......|.       +.|..|.-.+.|+.+..+|+ +++|+.... .+.+++..|++++..|..     |..+
T Consensus         2 ~ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g~-yVLri~~~~-~~~~~l~~~~~~l~~L~~~g~pvp~pi   79 (316)
T d2ppqa1           2 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDP-LILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPL   79 (316)
T ss_dssp             CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCC-EEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred             CCCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCCc-EEEEEcCCC-CCHHHHHHHHHHHHhhhhccccccccc
Confidence            345566666555553       23556777889999886665 789987543 233456667777777742     2222


Q ss_pred             eEe-e---eEeCCeeEEEEeeCCCCCHHH-----------hh------cCCC----CCCCCHH-----------------
Q 021659           97 ALQ-G---FSTGRKRLLVFDNIENGSLKE-----------HL------NDPL----KTPLDWK-----------------  134 (309)
Q Consensus        97 ~~~-~---~~~~~~~~lv~e~~~~~sL~~-----------~i------~~~~----~~~l~~~-----------------  134 (309)
                      ... |   .........++.+..+.....           .+      ....    .......                 
T Consensus        80 ~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (316)
T d2ppqa1          80 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE  159 (316)
T ss_dssp             CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred             eecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhcc
Confidence            211 1   112344556666665432210           00      0000    0000000                 


Q ss_pred             -HHHHHHHHHHHHHhhhhh-cCCCCeeecccCCCceeeCCCCceeEecccccc
Q 021659          135 -TRLQIAIGVAAALEYLLL-FSNLPMYYVSISSSSIMLDENFTAKLSDVGFFN  185 (309)
Q Consensus       135 -~~~~i~~~i~~~l~~lh~-~h~~~i~H~dl~p~nill~~~~~~kl~dfg~~~  185 (309)
                       .....+......+...+. .-..|++|||+.+.|++++++...-|+||+.+.
T Consensus       160 ~~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         160 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             hhHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEecccccc
Confidence             111222222222222211 135789999999999999988777899999764

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.98  E-value=0.0012  Score=57.30  Aligned_cols=72  Identities=13%  Similarity=0.102  Sum_probs=48.5

Q ss_pred             cccccCCCceEEEEEEcC--------CcEEEEEEeccccccHHHHHHHHHHHccCC-CCCcceEeeeEeCCeeEEEEeeC
Q 021659           44 RIVYTNSHGAAYKARFQD--------GEVALVKEIQALNLEKDAFYREIQLLGRLH-HRHLLALQGFSTGRKRLLVFDNI  114 (309)
Q Consensus        44 ~~lg~G~~~~v~~~~~~~--------~~~va~K~~~~~~~~~~~~~~ei~~l~~l~-h~niv~~~~~~~~~~~~lv~e~~  114 (309)
                      +.|+.|-...+|++..++        ...|++++..... ..-...+|..+++.+. +.-..++++++.+   .+|+||+
T Consensus        48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~~-~~idr~~E~~i~~~ls~~gl~Pkll~~~~~---g~I~efi  123 (395)
T d1nw1a_          48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE-TESHLVAESVIFTLLSERHLGPKLYGIFSG---GRLEEYI  123 (395)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC-CHHHHHHHHHHHHHHHHTTSSSCEEEEETT---EEEECCC
T ss_pred             EEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCcc-hhhHHHHHHHHHHHHHhCCCCCeEEEEcCC---ceEEEEe
Confidence            467888889999998643        3457777765322 3334567888888884 4333477777654   5789999


Q ss_pred             CCCCH
Q 021659          115 ENGSL  119 (309)
Q Consensus       115 ~~~sL  119 (309)
                      ++.++
T Consensus       124 ~g~~l  128 (395)
T d1nw1a_         124 PSRPL  128 (395)
T ss_dssp             CEEEC
T ss_pred             ccccC
Confidence            87433