Citrus Sinensis ID: 021684

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------31
MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG
ccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEccccccccccHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHccEEEccccEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHcccccEEEEccccccHHHHHHHHcccEEEEEEcccccHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHcccccccEEcccccccccccccccccccccEEEEEEcccccccccHHHHHHHHHHHHHccccccccccc
ccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccccHHHHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHHcccEcccccEEEEEEccEEEcccccccEEHHHHHHHHHHHHHHHHHHccccEEEEcccHHHHHHHHHHccccEEEEEEcccEcHHHHHHHHccccccccHHHHcccHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccHcHHHHHHHHccccccEEEcccccHHHHHcccccccccccEEEEEEEEccccccHHHHHHHHHHHHHHccccccccccc
MAPYGILIWAVITAVLASILILASHVhnarrnrttsvaffhpntndggggeRVLWCAVKAIqeespdldcivytgdhdafpdSLLARAVDRFgvellhppkvVHLYRRKwieestyprftmigqsfGSVYLSWEALckftplyyfdtsgyaftyplarIFGCRVIcythyptislDMISRVregssmynnnasiaqsnwlsQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLwgipdrikrvyppcdtsglqvlplersteypaiISVAQFRPEKVRYKLISTSCLEEIRCRLasaqtpicg
MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFfhpntndgggGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFgvellhppkvvhLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIIsvaqfrpekvRYKLISTSCLEEIRCRlasaqtpicg
MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG
***YGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLA********
MAPYGILIWAVITAVLASILILASH*****RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNN*ASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDT***************AIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG
MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLA********
MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRL*********
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SSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query309 2.2.26 [Sep-21-2011]
Q9XEE9 463 GDP-Man:Man(3)GlcNAc(2)-P yes no 0.909 0.606 0.748 1e-126
Q6P312 487 GDP-Man:Man(3)GlcNAc(2)-P yes no 0.818 0.519 0.484 5e-68
Q2TAA5 492 GDP-Man:Man(3)GlcNAc(2)-P yes no 0.886 0.556 0.460 5e-68
Q5R7Z6 492 GDP-Man:Man(3)GlcNAc(2)-P yes no 0.886 0.556 0.460 6e-68
Q3TZM9 492 GDP-Man:Man(3)GlcNAc(2)-P yes no 0.899 0.565 0.444 9e-68
Q08B22 486 GDP-Man:Man(3)GlcNAc(2)-P N/A no 0.792 0.504 0.495 1e-67
Q7ZW24 500 GDP-Man:Man(3)GlcNAc(2)-P yes no 0.912 0.564 0.438 1e-65
Q54DM9 505 GDP-Man:Man(3)GlcNAc(2)-P yes no 0.796 0.487 0.482 6e-62
P53993 470 Uncharacterized glycosylt yes no 0.844 0.555 0.4 5e-53
Q8X092 556 GDP-Man:Man(3)GlcNAc(2)-P N/A no 0.860 0.478 0.381 1e-49
>sp|Q9XEE9|ALG11_ARATH GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Arabidopsis thaliana GN=ALG11 PE=1 SV=2 Back     alignment and function desciption
 Score =  451 bits (1159), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 211/282 (74%), Positives = 239/282 (84%), Gaps = 1/282 (0%)

Query: 1   MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKA 60
           MA Y IL + ++T + A  L L   V NAR++R  +V FFHP TNDGGGGERVLWCAVKA
Sbjct: 1   MAIYFIL-YTLLTIIFAVSLSLFLSVINARKSRKRAVGFFHPYTNDGGGGERVLWCAVKA 59

Query: 61  IQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFT 120
           IQEE+PDLDC+++TGDHD+  DSL  RAVDRFGV L  PPKV+HL +RKWIEESTYP FT
Sbjct: 60  IQEENPDLDCVIFTGDHDSSSDSLARRAVDRFGVHLQSPPKVIHLNKRKWIEESTYPHFT 119

Query: 121 MIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISR 180
           MIGQS GSVYL+WEAL  FTPLY+ DTSGYAFTYPLARIFGC+V+CYTHYPTISLDMISR
Sbjct: 120 MIGQSLGSVYLAWEALRMFTPLYFLDTSGYAFTYPLARIFGCKVVCYTHYPTISLDMISR 179

Query: 181 VREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLW 240
           VR+ +SMYNN+ASIA+SNWLS CK+VYY  FSWMYG+VGSC  LAMVNSSWT+SHIE LW
Sbjct: 180 VRQRNSMYNNDASIAKSNWLSTCKLVYYRAFSWMYGMVGSCTHLAMVNSSWTKSHIEVLW 239

Query: 241 GIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEK 282
            IP+RI RVYPPCDTSGLQ  PLERS++ P IISVAQFRPEK
Sbjct: 240 RIPERITRVYPPCDTSGLQAFPLERSSDPPKIISVAQFRPEK 281
Required for N-linked oligosaccharide assembly. Has a role in the last step of the synthesis of the Man(5)GlcNAc(2)-PP-dolichol core oligosaccharide on the cytoplasmic face of the endoplasmic reticulum.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 3EC: 1
>sp|Q6P312|ALG11_XENTR GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Xenopus tropicalis GN=alg11 PE=2 SV=1 Back     alignment and function description
>sp|Q2TAA5|ALG11_HUMAN GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Homo sapiens GN=ALG11 PE=1 SV=2 Back     alignment and function description
>sp|Q5R7Z6|ALG11_PONAB GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Pongo abelii GN=ALG11 PE=2 SV=2 Back     alignment and function description
>sp|Q3TZM9|ALG11_MOUSE GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Mus musculus GN=Alg11 PE=2 SV=1 Back     alignment and function description
>sp|Q08B22|ALG11_XENLA GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Xenopus laevis GN=alg11 PE=2 SV=2 Back     alignment and function description
>sp|Q7ZW24|ALG11_DANRE GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Danio rerio GN=alg11 PE=2 SV=2 Back     alignment and function description
>sp|Q54DM9|ALG11_DICDI GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Dictyostelium discoideum GN=alg11 PE=3 SV=1 Back     alignment and function description
>sp|P53993|YMP8_CAEEL Uncharacterized glycosyltransferase B0361.8 OS=Caenorhabditis elegans GN=B0361.8 PE=3 SV=3 Back     alignment and function description
>sp|Q8X092|ALG11_NEUCR GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=alg-11 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query309
224119626 466 predicted protein [Populus trichocarpa] 0.896 0.594 0.791 1e-132
255574810 465 glycosyl transferase, putative [Ricinus 0.896 0.595 0.776 1e-130
449460937 463 PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Do 0.896 0.598 0.772 1e-128
356520284 456 PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Do 0.886 0.600 0.776 1e-126
225448485 463 PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Do 0.896 0.598 0.758 1e-125
42569790 463 alpha-1,2-mannosyltransferase [Arabidops 0.909 0.606 0.748 1e-124
297823943 449 glycosyl transferase family 1 protein [A 0.893 0.614 0.746 1e-124
297789912 463 glycosyl transferase family 1 protein [A 0.893 0.596 0.742 1e-124
356560288 460 PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Do 0.825 0.554 0.8 1e-122
68160672 463 glycosyl transferase family 1 protein [N 0.831 0.555 0.785 1e-122
>gi|224119626|ref|XP_002318120.1| predicted protein [Populus trichocarpa] gi|222858793|gb|EEE96340.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 220/278 (79%), Positives = 249/278 (89%), Gaps = 1/278 (0%)

Query: 6   ILIWAVITAVLASILILAS-HVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEE 64
           ++I++++T++L  IL + S  + N RR R  +V FFHP TNDGGGGERVLWCAVKAIQEE
Sbjct: 7   LVIFSLLTSLLTFILTITSREIINGRRTRQRAVGFFHPYTNDGGGGERVLWCAVKAIQEE 66

Query: 65  SPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQ 124
           SPDLDC++YTGDHD+  +SL++RA+DRFGV+LL PPKVVHLY+RKWIEE++YPRFTMIGQ
Sbjct: 67  SPDLDCVIYTGDHDSSSESLMSRALDRFGVQLLTPPKVVHLYKRKWIEETSYPRFTMIGQ 126

Query: 125 SFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREG 184
           SFGSVYLSWEALCKFTPLYYFDTSGYAFTYP+AR+FGC+VICYTHYPTISLDMISRVR+ 
Sbjct: 127 SFGSVYLSWEALCKFTPLYYFDTSGYAFTYPVARLFGCKVICYTHYPTISLDMISRVRDR 186

Query: 185 SSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPD 244
           SSMYNN+ASIA+S WLS CKI+YYT FSWMYG VGSCA LAMVNSSWTQSHIEKLW IP 
Sbjct: 187 SSMYNNDASIARSGWLSWCKIIYYTLFSWMYGFVGSCAHLAMVNSSWTQSHIEKLWRIPS 246

Query: 245 RIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEK 282
           RIKRVYPPCDTSGLQVLPLER T  P  ISVAQFRPEK
Sbjct: 247 RIKRVYPPCDTSGLQVLPLERPTTTPIFISVAQFRPEK 284

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255574810|ref|XP_002528312.1| glycosyl transferase, putative [Ricinus communis] gi|223532267|gb|EEF34070.1| glycosyl transferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449460937|ref|XP_004148200.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [Cucumis sativus] gi|449507809|ref|XP_004163134.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356520284|ref|XP_003528793.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [Glycine max] Back     alignment and taxonomy information
>gi|225448485|ref|XP_002271550.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase [Vitis vinifera] gi|297736585|emb|CBI25456.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|42569790|ref|NP_181548.2| alpha-1,2-mannosyltransferase [Arabidopsis thaliana] gi|347662497|sp|Q9XEE9.2|ALG11_ARATH RecName: Full=GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase; AltName: Full=Alpha-1,2-mannosyltransferase ALG11; AltName: Full=Asparagine-linked glycosylation protein 11; AltName: Full=Protein LEAF WILTING 3 gi|330254700|gb|AEC09794.1| alpha-1,2-mannosyltransferase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297823943|ref|XP_002879854.1| glycosyl transferase family 1 protein [Arabidopsis lyrata subsp. lyrata] gi|297325693|gb|EFH56113.1| glycosyl transferase family 1 protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|297789912|ref|XP_002862877.1| glycosyl transferase family 1 protein [Arabidopsis lyrata subsp. lyrata] gi|297308639|gb|EFH39136.1| glycosyl transferase family 1 protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356560288|ref|XP_003548425.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [Glycine max] Back     alignment and taxonomy information
>gi|68160672|gb|AAY86782.1| glycosyl transferase family 1 protein [Noccaea caerulescens] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query309
TAIR|locus:2065080 463 LEW3 "LEAF WILTING 3" [Arabido 0.909 0.606 0.748 7.1e-116
UNIPROTKB|E1BUY5 491 ALG11 "Uncharacterized protein 0.805 0.507 0.523 5.6e-68
UNIPROTKB|E1B756 500 ALG11 "Uncharacterized protein 0.812 0.502 0.498 3.2e-65
UNIPROTKB|E2RR35 667 ALG11 "Uncharacterized protein 0.886 0.410 0.464 6.7e-65
UNIPROTKB|F1RMC7 492 ALG11 "Uncharacterized protein 0.886 0.556 0.471 8.5e-65
RGD|1564725 492 Alg11 "ALG11, alpha-1,2-mannos 0.899 0.565 0.448 1.1e-64
UNIPROTKB|Q2TAA5 492 ALG11 "GDP-Man:Man(3)GlcNAc(2) 0.886 0.556 0.460 7.6e-64
FB|FBgn0037108 475 CG11306 [Drosophila melanogast 0.944 0.614 0.446 9.7e-64
MGI|MGI:2142632 492 Alg11 "asparagine-linked glyco 0.899 0.565 0.444 9.7e-64
ZFIN|ZDB-GENE-030131-7282 500 alg11 "asparagine-linked glyco 0.912 0.564 0.438 2.1e-61
TAIR|locus:2065080 LEW3 "LEAF WILTING 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1142 (407.1 bits), Expect = 7.1e-116, P = 7.1e-116
 Identities = 211/282 (74%), Positives = 239/282 (84%)

Query:     1 MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKA 60
             MA Y IL + ++T + A  L L   V NAR++R  +V FFHP TNDGGGGERVLWCAVKA
Sbjct:     1 MAIYFIL-YTLLTIIFAVSLSLFLSVINARKSRKRAVGFFHPYTNDGGGGERVLWCAVKA 59

Query:    61 IQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFT 120
             IQEE+PDLDC+++TGDHD+  DSL  RAVDRFGV L  PPKV+HL +RKWIEESTYP FT
Sbjct:    60 IQEENPDLDCVIFTGDHDSSSDSLARRAVDRFGVHLQSPPKVIHLNKRKWIEESTYPHFT 119

Query:   121 MIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISR 180
             MIGQS GSVYL+WEAL  FTPLY+ DTSGYAFTYPLARIFGC+V+CYTHYPTISLDMISR
Sbjct:   120 MIGQSLGSVYLAWEALRMFTPLYFLDTSGYAFTYPLARIFGCKVVCYTHYPTISLDMISR 179

Query:   181 VREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLW 240
             VR+ +SMYNN+ASIA+SNWLS CK+VYY  FSWMYG+VGSC  LAMVNSSWT+SHIE LW
Sbjct:   180 VRQRNSMYNNDASIAKSNWLSTCKLVYYRAFSWMYGMVGSCTHLAMVNSSWTKSHIEVLW 239

Query:   241 GIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEK 282
              IP+RI RVYPPCDTSGLQ  PLERS++ P IISVAQFRPEK
Sbjct:   240 RIPERITRVYPPCDTSGLQAFPLERSSDPPKIISVAQFRPEK 281
GO:0005576 "extracellular region" evidence=ISM
GO:0009058 "biosynthetic process" evidence=IEA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0005789 "endoplasmic reticulum membrane" evidence=IDA
GO:0006487 "protein N-linked glycosylation" evidence=IMP
GO:0006970 "response to osmotic stress" evidence=IMP
GO:0009737 "response to abscisic acid stimulus" evidence=IMP
GO:0009832 "plant-type cell wall biogenesis" evidence=IMP
UNIPROTKB|E1BUY5 ALG11 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E1B756 ALG11 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2RR35 ALG11 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1RMC7 ALG11 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
RGD|1564725 Alg11 "ALG11, alpha-1,2-mannosyltransferase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q2TAA5 ALG11 "GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
FB|FBgn0037108 CG11306 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
MGI|MGI:2142632 Alg11 "asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-7282 alg11 "asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9XEE9ALG11_ARATH2, ., 4, ., 1, ., 1, 3, 10.74820.90930.6069yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00120888
transferase, transferring glycosyl groups (466 aa)
(Populus trichocarpa)
Predicted Functional Partners:
estExt_Genewise1_v1.C_LG_XIV2606
SubName- Full=Putative uncharacterized protein; (424 aa)
    ••• 0.956
eugene3.00110811
hypothetical protein (413 aa)
    ••••0.942
eugene3.01460030
transferase, transferring glycosyl groups (EC-2.4.1.142) (481 aa)
   •• • 0.494
gw1.XIV.1495.1
hypothetical protein (284 aa)
      • 0.403

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query309
PLN02949 463 PLN02949, PLN02949, transferase, transferring glyc 0.0
cd03806 419 cd03806, GT1_ALG11_like, This family is most close 1e-133
>gnl|CDD|215511 PLN02949, PLN02949, transferase, transferring glycosyl groups Back     alignment and domain information 
 Score =  537 bits (1384), Expect = 0.0
 Identities = 212/277 (76%), Positives = 244/277 (88%)

Query: 6   ILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEES 65
           ++++ ++T+++  ++ +A  V  ARR+R  +V FFHP TNDGGGGERVLWCAV+AIQEE+
Sbjct: 5   LILYHLLTSIVLLLVAIALSVLRARRSRKRAVGFFHPYTNDGGGGERVLWCAVRAIQEEN 64

Query: 66  PDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQS 125
           PDLDC++YTGDHDA PDSL ARA DRFGVELL PPKVVHL +RKWIEE TYPRFTMIGQS
Sbjct: 65  PDLDCVIYTGDHDASPDSLAARARDRFGVELLSPPKVVHLRKRKWIEEETYPRFTMIGQS 124

Query: 126 FGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGS 185
            GSVYL+WEALCKFTPLY+FDTSGYAFTYPLAR+FGC+V+CYTHYPTIS DMISRVR+ S
Sbjct: 125 LGSVYLAWEALCKFTPLYFFDTSGYAFTYPLARLFGCKVVCYTHYPTISSDMISRVRDRS 184

Query: 186 SMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDR 245
           SMYNN+ASIA+S WLS CKI+YY  F+WMYGLVG CA LAMVNSSWT+SHIE LW IP+R
Sbjct: 185 SMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEALWRIPER 244

Query: 246 IKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEK 282
           IKRVYPPCDTSGLQ LPLERS + P IISVAQFRPEK
Sbjct: 245 IKRVYPPCDTSGLQALPLERSEDPPYIISVAQFRPEK 281

Length = 463
>gnl|CDD|99978 cd03806, GT1_ALG11_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 309
KOG1387 465 consensus Glycosyltransferase [Cell wall/membrane/ 100.0
PLN02949 463 transferase, transferring glycosyl groups 100.0
cd03806 419 GT1_ALG11_like This family is most closely related 100.0
cd03805 392 GT1_ALG2_like This family is most closely related 99.84
cd03804 351 GT1_wbaZ_like This family is most closely related 99.82
PRK15179 694 Vi polysaccharide biosynthesis protein TviE; Provi 99.6
PF13439177 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 99.59
cd03818 396 GT1_ExpC_like This family is most closely related 99.58
cd03809 365 GT1_mtfB_like This family is most closely related 99.57
TIGR03088 374 stp2 sugar transferase, PEP-CTERM/EpsH1 system ass 99.55
cd04955 363 GT1_like_6 This family is most closely related to 99.54
cd03796 398 GT1_PIG-A_like This family is most closely related 99.53
cd03811 353 GT1_WabH_like This family is most closely related 99.51
cd03812 358 GT1_CapH_like This family is most closely related 99.51
cd03819 355 GT1_WavL_like This family is most closely related 99.51
cd03820 348 GT1_amsD_like This family is most closely related 99.5
cd04962 371 GT1_like_5 This family is most closely related to 99.5
PLN02871 465 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase 99.47
PRK10307 412 putative glycosyl transferase; Provisional 99.47
TIGR03449 405 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino 99.47
PRK09922 359 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D 99.44
TIGR02149 388 glgA_Coryne glycogen synthase, Corynebacterium fam 99.42
cd03807 365 GT1_WbnK_like This family is most closely related 99.41
cd03801 374 GT1_YqgM_like This family is most closely related 99.4
cd04951 360 GT1_WbdM_like This family is most closely related 99.4
PRK10125 405 putative glycosyl transferase; Provisional 99.4
cd03822 366 GT1_ecORF704_like This family is most closely rela 99.38
cd03800 398 GT1_Sucrose_synthase This family is most closely r 99.37
cd03795 357 GT1_like_4 This family is most closely related to 99.36
cd03821 375 GT1_Bme6_like This family is most closely related 99.35
cd05844 367 GT1_like_7 Glycosyltransferases catalyze the trans 99.35
cd03808 359 GT1_cap1E_like This family is most closely related 99.35
cd03802 335 GT1_AviGT4_like This family is most closely relate 99.34
cd03823 359 GT1_ExpE7_like This family is most closely related 99.34
cd03799 355 GT1_amsK_like This is a family of GT1 glycosyltran 99.32
cd03792 372 GT1_Trehalose_phosphorylase Trehalose phosphorylas 99.3
cd03794 394 GT1_wbuB_like This family is most closely related 99.3
TIGR02472 439 sucr_P_syn_N sucrose-phosphate synthase, putative, 99.28
cd03814 364 GT1_like_2 This family is most closely related to 99.28
cd03798 377 GT1_wlbH_like This family is most closely related 99.27
KOG0853 495 consensus Glycosyltransferase [Cell wall/membrane/ 99.27
PRK00654 466 glgA glycogen synthase; Provisional 99.26
cd03817 374 GT1_UGDG_like This family is most closely related 99.26
cd03816 415 GT1_ALG1_like This family is most closely related 99.24
PRK15427 406 colanic acid biosynthesis glycosyltransferase WcaL 99.18
PRK15484 380 lipopolysaccharide 1,2-N-acetylglucosaminetransfer 99.15
PRK15490 578 Vi polysaccharide biosynthesis protein TviE; Provi 99.15
PLN02316 1036 synthase/transferase 99.13
cd03791 476 GT1_Glycogen_synthase_DULL1_like This family is mo 99.13
TIGR02095 473 glgA glycogen/starch synthases, ADP-glucose type. 99.13
PLN02275 371 transferase, transferring glycosyl groups 99.1
TIGR03087 397 stp1 sugar transferase, PEP-CTERM/EpsH1 system ass 99.09
TIGR02468 1050 sucrsPsyn_pln sucrose phosphate synthase/possible 99.08
cd03825 365 GT1_wcfI_like This family is most closely related 99.06
TIGR02470 784 sucr_synth sucrose synthase. This model represents 99.03
PF13579160 Glyco_trans_4_4: Glycosyl transferase 4-like domai 99.01
PRK14099 485 glycogen synthase; Provisional 99.01
PRK00726 357 murG undecaprenyldiphospho-muramoylpentapeptide be 98.99
cd03813 475 GT1_like_3 This family is most closely related to 98.92
cd03785 350 GT1_MurG MurG is an N-acetylglucosaminyltransferas 98.85
PRK14098 489 glycogen synthase; Provisional 98.77
cd04949 372 GT1_gtfA_like This family is most closely related 98.73
PLN02939 977 transferase, transferring glycosyl groups 98.72
PLN02846 462 digalactosyldiacylglycerol synthase 98.7
PLN00142 815 sucrose synthase 98.62
TIGR02918 500 accessory Sec system glycosylation protein GtfA. M 98.61
TIGR01133 348 murG undecaprenyldiphospho-muramoylpentapeptide be 98.56
PHA01630 331 putative group 1 glycosyl transferase 98.55
cd04946 407 GT1_AmsK_like This family is most closely related 98.35
PLN02501 794 digalactosyldiacylglycerol synthase 98.34
PRK13609 380 diacylglycerol glucosyltransferase; Provisional 98.23
PHA01633 335 putative glycosyl transferase group 1 98.22
cd03793 590 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, 98.21
PRK05749 425 3-deoxy-D-manno-octulosonic-acid transferase; Revi 98.15
PLN02605 382 monogalactosyldiacylglycerol synthase 98.13
PRK13608 391 diacylglycerol glucosyltransferase; Provisional 98.03
KOG1111 426 consensus N-acetylglucosaminyltransferase complex, 97.81
PF09314185 DUF1972: Domain of unknown function (DUF1972); Int 97.74
cd01635229 Glycosyltransferase_GTB_type Glycosyltransferases 97.65
TIGR00215 385 lpxB lipid-A-disaccharide synthase. Lipid-A precur 97.52
cd03788 460 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a 97.34
cd04950 373 GT1_like_1 Glycosyltransferases catalyze the trans 97.21
PRK00025 380 lpxB lipid-A-disaccharide synthase; Reviewed 96.65
TIGR02400 456 trehalose_OtsA alpha,alpha-trehalose-phosphate syn 96.64
PF13477139 Glyco_trans_4_2: Glycosyl transferase 4-like 96.53
cd03786 363 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th 96.46
TIGR00236 365 wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras 96.45
COG0438 381 RfaG Glycosyltransferase [Cell envelope biogenesis 95.95
PF12038168 DUF3524: Domain of unknown function (DUF3524); Int 95.94
PRK12446352 undecaprenyldiphospho-muramoylpentapeptide beta-N- 95.65
PLN03063 797 alpha,alpha-trehalose-phosphate synthase (UDP-form 95.58
TIGR03492 396 conserved hypothetical protein. This protein famil 95.55
PF12000171 Glyco_trans_4_3: Gkycosyl transferase family 4 gro 94.91
PRK14501 726 putative bifunctional trehalose-6-phosphate syntha 94.76
COG0707357 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami 92.11
COG0297 487 GlgA Glycogen synthase [Carbohydrate transport and 91.48
PRK09814 333 beta-1,6-galactofuranosyltransferase; Provisional 91.46
COG1519 419 KdtA 3-deoxy-D-manno-octulosonic-acid transferase 91.29
PF05693 633 Glycogen_syn: Glycogen synthase; InterPro: IPR0086 91.01
PF08323245 Glyco_transf_5: Starch synthase catalytic domain; 89.14
PF04007335 DUF354: Protein of unknown function (DUF354); Inte 88.76
PF08660170 Alg14: Oligosaccharide biosynthesis protein Alg14 87.55
TIGR03713 519 acc_sec_asp1 accessory Sec system protein Asp1. Th 85.2
TIGR02398 487 gluc_glyc_Psyn glucosylglycerol-phosphate synthase 84.81
PF06925169 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) sy 82.91
KOG2941 444 consensus Beta-1,4-mannosyltransferase [Posttransl 82.65
PF04413186 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid 81.46
COG4671 400 Predicted glycosyl transferase [General function p 80.38
PF13528318 Glyco_trans_1_3: Glycosyl transferase family 1 80.18
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information 
Probab=100.00  E-value=1.1e-52  Score=383.49  Aligned_cols=280  Identities=36%  Similarity=0.642  Sum_probs=243.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhh------hhccCCCCcEEEEEcCCCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCC
Q 021684            7 LIWAVITAVLASILILASHV------HNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAF   80 (309)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~rIa~~hp~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~   80 (309)
                      +|--+|+++.-+++++....      +++ ++.-..||||||+|++|||+|||+|.+.+++|+.+|++..+|||++.|.+
T Consensus        11 ~i~~~l~~v~~l~~l~~~l~~k~sl~~~~-~k~~ktvgfFHPYCNAGGGGErVLW~Avr~~q~k~~n~~~viYsGD~n~t   89 (465)
T KOG1387|consen   11 LISSSLVLVYGLIKLLTWLFKKSSLLNRA-EKNVKTVGFFHPYCNAGGGGERVLWKAVRITQRKFPNNVIVIYSGDFNVT   89 (465)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhHHhhhhh-hhhceEEEEecccccCCCCcceehhHHHHHHHHhCCCceEEEEeCCCCCC
Confidence            45566777777777766554      333 44455799999999999999999999999999999999999999998889


Q ss_pred             hhhHHHHHhhhcCcccCCC-CeEEEccccceeecccCCchhhhHHHHhHHHHHHHHHhccCCcEEEeCCCCcccccee-e
Q 021684           81 PDSLLARAVDRFGVELLHP-PKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLA-R  158 (309)
Q Consensus        81 ~~~~~~~~~~~~~~~l~~~-~~~v~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p~a-~  158 (309)
                      +++++.+++..|++++++. +.++.++.++|...+.|++|++++|+++.|+++++++-+..||++||||||++.+|+. +
T Consensus        90 ~~~IL~k~k~~F~idlDs~nI~Fi~Lk~R~lVea~~~~hfTllgQaigsmIl~~Eai~r~~Pdi~IDtMGY~fs~p~~r~  169 (465)
T KOG1387|consen   90 PENILNKVKNKFDIDLDSDNIFFIYLKLRYLVEASTWKHFTLLGQAIGSMILAFEAIIRFPPDIFIDTMGYPFSYPIFRR  169 (465)
T ss_pred             HHHHHHHHHHhcCceecccceEEEEEEeeeeeecccccceehHHHHHHHHHHHHHHHHhCCchheEecCCCcchhHHHHH
Confidence            9999999999999999754 4999999999999999999999999999999999999999999999999999999964 4


Q ss_pred             ecCCeEEEEeecCCcchHHHHhhhhcccccCchhhhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHH
Q 021684          159 IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEK  238 (309)
Q Consensus       159 ~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~  238 (309)
                      +.+.|+++|+|||.||+||+..+..++-          ++...+-|..||++|..+|..+++.||.+++||+||.++|..
T Consensus       170 l~~~~V~aYvHYP~iS~DML~~l~qrq~----------s~~l~~~KlaY~rlFa~lY~~~G~~ad~vm~NssWT~nHI~q  239 (465)
T KOG1387|consen  170 LRRIPVVAYVHYPTISTDMLKKLFQRQK----------SGILVWGKLAYWRLFALLYQSAGSKADIVMTNSSWTNNHIKQ  239 (465)
T ss_pred             HccCceEEEEecccccHHHHHHHHhhhh----------cchhhhHHHHHHHHHHHHHHhccccceEEEecchhhHHHHHH
Confidence            7889999999999999999998865532          124667788999999999999999999999999999999999


Q ss_pred             HhCCCCCceEecCCCCCCCCcccCCCCCCCCcEEEEEcCCccccChh-hhhccchhHhhhccc
Q 021684          239 LWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRY-KLISTSCLEEIRCRL  300 (309)
Q Consensus       239 ~~~~~~~~~VIYPPVd~~~~~~~~~~~~~~~~~iLsVGRl~p~Kn~~-~lI~A~~f~~l~~~~  300 (309)
                      .|+ ..+..+|||||++++.......++++++-+|++|+++||||+. +.++|  +-..+..+
T Consensus       240 iW~-~~~~~iVyPPC~~e~lks~~~te~~r~~~ll~l~Q~RPEKnH~~Lql~A--l~~~~~pl  299 (465)
T KOG1387|consen  240 IWQ-SNTCSIVYPPCSTEDLKSKFGTEGERENQLLSLAQFRPEKNHKILQLFA--LYLKNEPL  299 (465)
T ss_pred             Hhh-ccceeEEcCCCCHHHHHHHhcccCCcceEEEEEeecCcccccHHHHHHH--HHHhcCch
Confidence            999 5899999999999988754334555689999999999999999 66667  55555554

>PLN02949 transferase, transferring glycosyl groups Back     alignment and domain information
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A Back     alignment and domain information
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase Back     alignment and domain information
>PRK10307 putative glycosyl transferase; Provisional Back     alignment and domain information
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase Back     alignment and domain information
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional Back     alignment and domain information
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family Back     alignment and domain information
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known Back     alignment and domain information
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli Back     alignment and domain information
>PRK10125 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria Back     alignment and domain information
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose Back     alignment and domain information
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain Back     alignment and domain information
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>PRK00654 glgA glycogen synthase; Provisional Back     alignment and domain information
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional Back     alignment and domain information
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional Back     alignment and domain information
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information
>PLN02316 synthase/transferase Back     alignment and domain information
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type Back     alignment and domain information
>PLN02275 transferase, transferring glycosyl groups Back     alignment and domain information
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant Back     alignment and domain information
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02470 sucr_synth sucrose synthase Back     alignment and domain information
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A Back     alignment and domain information
>PRK14099 glycogen synthase; Provisional Back     alignment and domain information
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional Back     alignment and domain information
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis Back     alignment and domain information
>PRK14098 glycogen synthase; Provisional Back     alignment and domain information
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding Back     alignment and domain information
>PLN02939 transferase, transferring glycosyl groups Back     alignment and domain information
>PLN02846 digalactosyldiacylglycerol synthase Back     alignment and domain information
>PLN00142 sucrose synthase Back     alignment and domain information
>TIGR02918 accessory Sec system glycosylation protein GtfA Back     alignment and domain information
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase Back     alignment and domain information
>PHA01630 putative group 1 glycosyl transferase Back     alignment and domain information
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PLN02501 digalactosyldiacylglycerol synthase Back     alignment and domain information
>PRK13609 diacylglycerol glucosyltransferase; Provisional Back     alignment and domain information
>PHA01633 putative glycosyl transferase group 1 Back     alignment and domain information
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis Back     alignment and domain information
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed Back     alignment and domain information
>PLN02605 monogalactosyldiacylglycerol synthase Back     alignment and domain information
>PRK13608 diacylglycerol glucosyltransferase; Provisional Back     alignment and domain information
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] Back     alignment and domain information
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases Back     alignment and domain information
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>TIGR00215 lpxB lipid-A-disaccharide synthase Back     alignment and domain information
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor Back     alignment and domain information
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed Back     alignment and domain information
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] Back     alignment and domain information
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like Back     alignment and domain information
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) Back     alignment and domain information
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase Back     alignment and domain information
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes Back     alignment and domain information
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed Back     alignment and domain information
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional Back     alignment and domain information
>TIGR03492 conserved hypothetical protein Back     alignment and domain information
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria Back     alignment and domain information
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional Back     alignment and domain information
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional Back     alignment and domain information
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 Back     alignment and domain information
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 Back     alignment and domain information
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length Back     alignment and domain information
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [] Back     alignment and domain information
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 Back     alignment and domain information
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase Back     alignment and domain information
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [] Back     alignment and domain information
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides Back     alignment and domain information
>COG4671 Predicted glycosyl transferase [General function prediction only] Back     alignment and domain information
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query309
3okp_A 394 GDP-mannose-dependent alpha-(1-6)-phosphatidylino 99.66
3fro_A 439 GLGA glycogen synthase; glycosyltransferase family 99.65
3c48_A 438 Predicted glycosyltransferases; retaining glycosyl 99.64
2r60_A 499 Glycosyl transferase, group 1; rossmann-fold; 1.80 99.64
2iw1_A 374 Lipopolysaccharide core biosynthesis protein RFAG; 99.61
2gek_A 406 Phosphatidylinositol mannosyltransferase (PIMA); G 99.6
2jjm_A 394 Glycosyl transferase, group 1 family protein; anth 99.55
2x6q_A 416 Trehalose-synthase TRET; biosynthetic protein; 2.2 99.54
2iuy_A 342 Avigt4, glycosyltransferase; antibiotics, family G 99.53
3oy2_A 413 Glycosyltransferase B736L; rossmann fold, GDP-mann 99.51
1rzu_A 485 Glycogen synthase 1; glycosyl-transferase, GT-B fo 99.44
2qzs_A 485 Glycogen synthase; glycosyl-transferase, GT-B fold 99.42
3s28_A 816 Sucrose synthase 1; glycosyltransferase, sucrose m 99.29
2x0d_A 413 WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge 99.12
1f0k_A 364 MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe 99.04
3vue_A 536 GBSS-I, granule-bound starch synthase 1, chloropla 98.88
2vsy_A 568 XCC0866; transferase, glycosyl transferase, GT-B, 98.79
3beo_A 375 UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a 98.76
2hy7_A 406 Glucuronosyltransferase GUMK; glycosyltransferases 98.65
1vgv_A 384 UDP-N-acetylglucosamine 2-epimerase; structural ge 98.54
1v4v_A 376 UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t 98.43
2xci_A 374 KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci 98.3
3nb0_A 725 Glycogen [starch] synthase isoform 2; glycogen syn 97.98
3s2u_A 365 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape 97.81
3otg_A 412 CALG1; calicheamicin, TDP, structural genomics, PS 97.7
1uqt_A 482 Alpha, alpha-trehalose-phosphate synthase; glycosy 97.47
3dzc_A 396 UDP-N-acetylglucosamine 2-epimerase; structural ge 97.22
2bfw_A 200 GLGA glycogen synthase; glycosyltransferase family 96.53
3t5t_A 496 Putative glycosyltransferase; GTB fold, pseudoglyc 96.51
2iyf_A 430 OLED, oleandomycin glycosyltransferase; antibiotic 96.49
4fzr_A 398 SSFS6; structural genomics, PSI-biology, protein s 96.04
2p6p_A 384 Glycosyl transferase; X-RAY-diffraction,urdamycina 95.24
3tsa_A 391 SPNG, NDP-rhamnosyltransferase; glycosyltransferas 94.93
3ot5_A 403 UDP-N-acetylglucosamine 2-epimerase; structural ge 94.62
3ia7_A 402 CALG4; glycosysltransferase, calicheamicin, enediy 94.2
3rsc_A 415 CALG2; TDP, enediyne, structural genomics, PSI-2, 93.83
2f9f_A 177 First mannosyl transferase (WBAZ-1); alpha-beta pr 89.68
4hwg_A 385 UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc 88.6
3oti_A 398 CALG3; calicheamicin, TDP, structural genomics, PS 87.97
3rhz_A 339 GTF3, nucleotide sugar synthetase-like protein; gl 86.92
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Back     alignment and structure
Probab=99.66  E-value=1.1e-15  Score=142.83  Aligned_cols=221  Identities=14%  Similarity=0.117  Sum_probs=138.5

Q ss_pred             CCCcEEEEEcCCCC-CCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccce
Q 021684           32 NRTTSVAFFHPNTN-DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKW  110 (309)
Q Consensus        32 ~~~~rIa~~hp~l~-~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~  110 (309)
                      .++|||+++.+.+. ..||+|+++.+++++|  .+  +++.+++...  . .........      ..+++++.+.....
T Consensus         2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g--~~v~v~~~~~--~-~~~~~~~~~------~~~~~~~~~~~~~~   68 (394)
T 3okp_A            2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DP--ESIVVFASTQ--N-AEEAHAYDK------TLDYEVIRWPRSVM   68 (394)
T ss_dssp             --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CG--GGEEEEEECS--S-HHHHHHHHT------TCSSEEEEESSSSC
T ss_pred             CCCceEEEEeCccCCccchHHHHHHHHHHHh--cC--CeEEEEECCC--C-ccchhhhcc------ccceEEEEcccccc
Confidence            36789999998653 4789999999999998  33  6677887654  2 111111111      11223444322111


Q ss_pred             eecccCCchhhhHHHHhHHHHHHHHHhccCCcEEEeCCCCccccc--eeeecCCe-EEEEeecCCcchHHHHhhhhcccc
Q 021684          111 IEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCR-VICYTHYPTISLDMISRVREGSSM  187 (309)
Q Consensus       111 ~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p--~a~~~~~~-~i~Y~H~P~~s~~~~~~~~~~~~~  187 (309)
                      .     +..       .....+.+.+++.+||+++..........  +++..+.| ++..+|....     .  +     
T Consensus        69 ~-----~~~-------~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~-----~--~-----  124 (394)
T 3okp_A           69 L-----PTP-------TTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEV-----G--W-----  124 (394)
T ss_dssp             C-----SCH-------HHHHHHHHHHHHTTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHH-----H--H-----
T ss_pred             c-----cch-------hhHHHHHHHHHhcCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchh-----h--h-----
Confidence            1     111       12223345577789998886543222111  12234554 7777887530     0  0     


Q ss_pred             cCchhhhhhcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCCCCCceEecCCCCCCCCccc-CC---
Q 021684          188 YNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL-PL---  263 (309)
Q Consensus       188 ~~~~~y~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~~~~~~VIYPPVd~~~~~~~-~~---  263 (309)
                       .         .....+        .+.++..+.+|.++++|+++++.+.+.++...++.||+|++|.+.+... +.   
T Consensus       125 -~---------~~~~~~--------~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~  186 (394)
T 3okp_A          125 -S---------MLPGSR--------QSLRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKS  186 (394)
T ss_dssp             -T---------TSHHHH--------HHHHHHHHHCSEEEESCHHHHHHHHHHHCSSSEEEECCCCBCTTTSCCCCHHHHH
T ss_pred             -h---------hcchhh--------HHHHHHHHhCCEEEEcCHHHHHHHHHhcCCCCCeEEecCCcCHHHcCCCCchhhH
Confidence             0         011111        1233344779999999999999999999755789999999998877531 00   


Q ss_pred             ------CCCCCCcEEEEEcCCccccChhhhhccchhHhhhcccCCCCCccCC
Q 021684          264 ------ERSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASAQTPICG  309 (309)
Q Consensus       264 ------~~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~~~~~~~  309 (309)
                            .-+.+...++++||+.++|+++.+++|  ++.+.++..+-++.++|
T Consensus       187 ~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a--~~~l~~~~~~~~l~i~G  236 (394)
T 3okp_A          187 ATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKA--MPQVIAARPDAQLLIVG  236 (394)
T ss_dssp             HHHHHTTCCTTCCEEEEESCSCGGGCHHHHHHH--HHHHHHHSTTCEEEEEC
T ss_pred             HHHHhcCCCcCceEEEEEeccccccCHHHHHHH--HHHHHhhCCCeEEEEEc
Confidence                  012234799999999999999999999  99998876677887776
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* Back     alignment and structure
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Back     alignment and structure
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Back     alignment and structure
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Back     alignment and structure
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Back     alignment and structure
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Back     alignment and structure
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Back     alignment and structure
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Back     alignment and structure
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Back     alignment and structure
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Back     alignment and structure
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Back     alignment and structure
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Back     alignment and structure
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Back     alignment and structure
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* Back     alignment and structure
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* Back     alignment and structure
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* Back     alignment and structure
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A Back     alignment and structure
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* Back     alignment and structure
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* Back     alignment and structure
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 Back     alignment and structure
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* Back     alignment and structure
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Back     alignment and structure
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} Back     alignment and structure
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* Back     alignment and structure
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Back     alignment and structure
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} Back     alignment and structure
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Back     alignment and structure
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* Back     alignment and structure
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} Back     alignment and structure
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* Back     alignment and structure
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} Back     alignment and structure
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* Back     alignment and structure
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} Back     alignment and structure
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} Back     alignment and structure
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* Back     alignment and structure
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Back     alignment and structure
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} Back     alignment and structure
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* Back     alignment and structure
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query309
d2iw1a1 370 Lipopolysaccharide core biosynthesis protein RfaG 99.39
d2bisa1 437 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 99.11
d1rzua_ 477 Glycogen synthase 1, GlgA {Agrobacterium tumefacie 98.97
d1uqta_ 456 Trehalose-6-phosphate synthase, OtsA {Escherichia 95.31
d2bfwa1 196 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 95.12
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Lipopolysaccharide core biosynthesis protein RfaG
species: Escherichia coli [TaxId: 562]

Probab=99.39  E-value=6.8e-12  Score=112.51  Aligned_cols=213  Identities=12%  Similarity=0.050  Sum_probs=120.8

Q ss_pred             EEEEcC-CCCCCChHhHHHHHHHHHHHHhCCCCeEEEEeccCCCChhhHHHHHhhhcCcccCCCCeEEEccccceeeccc
Q 021684           37 VAFFHP-NTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST  115 (309)
Q Consensus        37 Ia~~hp-~l~~gGGaErV~~~la~aL~~~~~~~~~~i~T~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~l~~~~~~~~~~  115 (309)
                      |||+.+ ++ -.||+||.+.++|++|+++|  +++.++|...+.               +.++.++++.+....+     
T Consensus         2 i~f~~~~y~-p~GG~e~~~~~la~~L~~~G--~~V~v~~~~~~~---------------~~~~~~~~~~~~~~~~-----   58 (370)
T d2iw1a1           2 VAFCLYKYF-PFGGLQRDFMRIASTVAARG--HHVRVYTQSWEG---------------DCPKAFELIQVPVKSH-----   58 (370)
T ss_dssp             EEEECSEEC-TTCHHHHHHHHHHHHHHHTT--CCEEEEESEECS---------------CCCTTCEEEECCCCCS-----
T ss_pred             EEEEecCCC-CCCCHHHHHHHHHHHHHHCC--CEEEEEecCCCC---------------CCCCceEEEEcCcccc-----
Confidence            788886 55 57999999999999999998  556788764311               2233334444422111     


Q ss_pred             CCchhhhHHHHhHHHHHHHHHhccCCcEEEeCCCCccccceeeecCCeEEEEeecCCcchHHHHhhhhcccccCchhhhh
Q 021684          116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIA  195 (309)
Q Consensus       116 ~~~~~l~~~~l~~~~~~~~~l~~~~pdv~iss~~~a~~~p~a~~~~~~~i~Y~H~P~~s~~~~~~~~~~~~~~~~~~y~~  195 (309)
                       ....   ..........+.++..++|+++......   .+       .+.+.+..........   ..       ....
T Consensus        59 -~~~~---~~~~~~~~~~~~~~~~~~d~v~~~~~~~---~~-------~~~~~~~~~~~~~~~~---~~-------~~~~  114 (370)
T d2iw1a1          59 -TNHG---RNAEYYAWVQNHLKEHPADRVVGFNKMP---GL-------DVYFAADVCYAEKVAQ---EK-------GFLY  114 (370)
T ss_dssp             -SHHH---HHHHHHHHHHHHHHHSCCSEEEESSCCT---TC-------SEEECCSCCHHHHHHH---HC-------CHHH
T ss_pred             -ccch---hhHHHHHHHHHHHHhcccceeeecccCc---hH-------HHHHHhhcccceeeee---ec-------Cccc
Confidence             1111   1111122233456677899887654322   11       1111111110000000   00       0000


Q ss_pred             hcchhhHhHHHHHHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHhCC-CCCceEecCCCCCCCCccc--CCC--------
Q 021684          196 QSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVL--PLE--------  264 (309)
Q Consensus       196 ~~~~~~~~k~~y~~~~~~~~~~~~~~ad~vIaNS~~t~~~i~~~~~~-~~~~~VIYPPVd~~~~~~~--~~~--------  264 (309)
                      .  +.... ..+.... . .......++.++++|+...+++.+.++. +.++.|++|+++++.+...  +..        
T Consensus       115 ~--~~~~~-~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~gv~~~~~~~~~~~~~~~~~r~~~  189 (370)
T d2iw1a1         115 R--LTSRY-RHYAAFE-R-ATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKN  189 (370)
T ss_dssp             H--TSHHH-HHHHHHH-H-HHHSTTCCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHT
T ss_pred             c--ccchh-chhHHHH-H-HHHhhccCceEEEecHHHHHHHHHhcCCCcceEEEEEeecccccccccCchhhhhhhhhcc
Confidence            0  00000 0111110 0 1122357899999999999999999986 6778999999987765321  110        


Q ss_pred             -CCCCCcEEEEEcCCccccChhhhhccchhHhhhcccCCC
Q 021684          265 -RSTEYPAIISVAQFRPEKVRYKLISTSCLEEIRCRLASA  303 (309)
Q Consensus       265 -~~~~~~~iLsVGRl~p~Kn~~~lI~A~~f~~l~~~~~~~  303 (309)
                       -+..+++++++||+.++|+++.+|+|  |+.+.++..+.
T Consensus       190 ~~~~~~~~i~~~gr~~~~Kg~~~li~a--~~~l~~~~~~~  227 (370)
T d2iw1a1         190 GIKEQQNLLLQVGSDFGRKGVDRSIEA--LASLPESLRHN  227 (370)
T ss_dssp             TCCTTCEEEEEECSCTTTTTHHHHHHH--HHTSCHHHHHT
T ss_pred             CCCccceEEEEEeccccccchhhhccc--ccccccccccc
Confidence             11246789999999999999999999  99987665443
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure