Citrus Sinensis ID: 021741

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------31
MTEALQLPVIDLSSPDRLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFSLQLEDKMKLARKEHRGYTALCDEILDPSSTSEGDPKESFYIGPLEGTLSSMNQWPSLEILPTWRSTMEYYHQKVLSAGRRLIHLIALALNLNEDFFEKVGALDAPMAFLRLLHYPGELVSSNQEVCGASAHSDYGMITLLATDGVPGLQVCREKFNQPRLWEDVPNIKGALIVNIGDMMERWTNCLFRSTLHRVMSSGQERYSAAFFLDPNGDCVVECLESCCSESNPPKFAPIRSGDYIKERIRLTYGS
ccccccccEEEcccccHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHcccccccccccccccccccccccccccccEEEccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEcccccccccccccccccccccccccccEEEccccccEEEEEccccccccEEEcccccccEEEEHHHHHHHHHccccccccccccccccccEEEEEEcccccccEEEccccccccccccccccccHHHHHHHHHHHHHcc
ccccccccEEEcccccHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHcccccccEEEEccccccccccccccEEEEEEEccccccccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHcccccccEEEEEEccccccccccccEcccccccccccEEEEEccccccEEEEEcccccccEEEEccccccEEEEEcccHHHHHccccEEEEEEEEEcccccEEEEEEEcccccccEEcccHHHcccccccccccccHHHHHHHHHHHcccc
mtealqlpvidlsspdrlsTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFSLQLEDKMKLARKEHRGYTAlcdeildpsstsegdpkesfyigplegtlssmnqwpsleilptwRSTMEYYHQKVLSAGRRLIHLIALALNLNEDFFEKVGALDAPMAFLRLLhypgelvssnqevcgasahsdYGMITLLatdgvpglqvcrekfnqprlwedvpnikgALIVNIGDMMERWTNCLFRSTLHRVMSsgqerysaaffldpngdCVVECLEsccsesnppkfapirsgdyiKERIRLTYGS
mtealqlpvidlsspdrlSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFSLQLEDKMKLARKEHRGytalcdeildpsstsegdpkeSFYIGPLEGTLSSMNQWPSLEILPTWRSTMEYYHQKVLSAGRRLIHLIALALNLNEDFFEKVGALDAPMAFLRLLHYPGELVSSNQEVCGASAHSDYGMITLLATDGVPGLQVCREKFnqprlwedvpniKGALIVNIGDMMERWTNCLFRSTLHRVMSSGQERYSAAFFLDPNGDCVVECLESCCSesnppkfapirsgdyikerirltygs
MTEALQLPVIDLSSPDRLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFSLQLEDKMKLARKEHRGYTALCDEILDPSSTSEGDPKESFYIGPLEGTLSSMNQWPSLEILPTWRSTMEYYHQKVLSAGrrlihlialalnlnEDFFEKVGALDAPMAFLRLLHYPGELVSSNQEVCGASAHSDYGMITLLATDGVPGLQVCREKFNQPRLWEDVPNIKGALIVNIGDMMERWTNCLFRSTLHRVMSSGQERYSAAFFLDPNGDCVVeclesccsesNPPKFAPIRSGDYIKERIRLTYGS
*********************KSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFSLQLEDKMKLARKEHRGYTALCDEI**************FYIGPLEGTLSSMNQWPSLEILPTWRSTMEYYHQKVLSAGRRLIHLIALALNLNEDFFEKVGALDAPMAFLRLLHYPGELVSSNQEVCGASAHSDYGMITLLATDGVPGLQVCREKFNQPRLWEDVPNIKGALIVNIGDMMERWTNCLFRSTLHRVMSSGQERYSAAFFLDPNGDCVVECLESCCSE********IR*GDYIKERI******
*TEALQLPVIDLSSPDRLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFSLQLEDKMKLARKEHRGYTALCD**********GDPKESFYIGPLEGTLSSMNQWPSLEILPTWRSTMEYYHQKVLSAGRRLIHLIALALNLNEDFFEKVGALDAPMAFLRLLHYPGE**********ASAHSDYGMITLLATDGVPGLQVCREKFNQPRLWEDVPNIKGALIVNIGDMMERWTNCLFRSTLHRVMSSGQERYSAAFFLDPNGDCVVECLESCCSESNPPKFAPIRSGDYIKERIRLT***
MTEALQLPVIDLSSPDRLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFSLQLEDKMKLARKEHRGYTALCDEILDPSSTSEGDPKESFYIGPLEGTLSSMNQWPSLEILPTWRSTMEYYHQKVLSAGRRLIHLIALALNLNEDFFEKVGALDAPMAFLRLLHYPGELVSSNQEVCGASAHSDYGMITLLATDGVPGLQVCREKFNQPRLWEDVPNIKGALIVNIGDMMERWTNCLFRSTLHRVMSSGQERYSAAFFLDPNGDCVVECLESCCSESNPPKFAPIRSGDYIKERIRLTYGS
***ALQLPVIDLSSPDRLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFSLQLEDKMKLARKEHRGYTALCDEILDPSSTSEGDPKESFYIGPLEGTLSSMNQWPSLEILPTWRSTMEYYHQKVLSAGRRLIHLIALALNLNEDFFEKVGALDAPMAFLRLLHYPGELVSSNQEVCGASAHSDYGMITLLATDGVPGLQVCREKFNQPRLWEDVPNIKGALIVNIGDMMERWTNCLFRSTLHRVMSSGQERYSAAFFLDPNGDCVVECLESCCSESNPPKFAPIRSGDYIKERIRLTY**
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MTEALQLPVIDLSSPDRLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFSLQLEDKMKLARKEHRGYTALCDEILDPSSTSEGDPKESFYIGPLEGTLSSMNQWPSLEILPTWRSTMEYYHQKVLSAGRRLIHLIALALNLNEDFFEKVGALDAPMAFLRLLHYPGELVSSNQEVCGASAHSDYGMITLLATDGVPGLQVCREKFNQPRLWEDVPNIKGALIVNIGDMMERWTNCLFRSTLHRVMSSGQERYSAAFFLDPNGDCVVECLESCCSESNPPKFAPIRSGDYIKERIRLTYGS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query308 2.2.26 [Sep-21-2011]
Q54RA4363 Probable iron/ascorbate o yes no 0.824 0.699 0.356 7e-38
A6BM06368 1-aminocyclopropane-1-car N/A no 0.847 0.709 0.345 4e-37
Q76NT9368 1-aminocyclopropane-1-car no no 0.847 0.709 0.345 4e-37
Q7LL04321 UPF0676 protein C1494.01 yes no 0.944 0.906 0.324 3e-29
O04395291 Flavonol synthase/flavano N/A no 0.918 0.972 0.278 7e-28
Q9FFQ4325 Probable flavonol synthas no no 0.922 0.873 0.294 2e-27
Q96330336 Flavonol synthase/flavano no no 0.896 0.821 0.302 1e-26
Q07512348 Flavonol synthase/flavano N/A no 0.905 0.801 0.305 6e-26
Q9ZWQ9335 Flavonol synthase/flavano N/A no 0.902 0.829 0.288 2e-25
Q9XHG2337 Flavonol synthase/flavano N/A no 0.912 0.833 0.302 6e-25
>sp|Q54RA4|Y3291_DICDI Probable iron/ascorbate oxidoreductase DDB_G0283291 OS=Dictyostelium discoideum GN=DDB_G0283291 PE=3 SV=1 Back     alignment and function desciption
 Score =  157 bits (398), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 109/306 (35%), Positives = 160/306 (52%), Gaps = 52/306 (16%)

Query: 6   QLPVIDLSSP--------DRLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFF 57
           QLP+ID+ S          +   +K I  AC ++GFFY+  HG+++ELI ++   SKKFF
Sbjct: 12  QLPIIDIESYGNDKEEELKKKLISKEIENACKNFGFFYIKGHGIDQELIDRLERLSKKFF 71

Query: 58  SL----QLEDKMKLARKEHRGYTALCDEILDPSSTSEGDPKESFYIG-------PL---E 103
           SL    +++ +M+LA+K  RGY  +  E+    ++   D KE  Y+G       PL   +
Sbjct: 72  SLDQSIKMKYRMELAQKAWRGYFVVGGEL----TSGLKDWKEGLYLGTELNDDHPLVIAQ 127

Query: 104 GTLSSMNQWPSLE-----ILPTWRSTMEYYHQKVLSAGRRLIHLIALALNLNEDFFEKVG 158
             L  +N +P+LE      +  ++ T+  Y  KV   G  L+ LIA++LNL+ D+F    
Sbjct: 128 TPLHGLNLFPTLEEEIEYDIVGFKDTILTYIDKVTKLGHSLMELIAISLNLSADYFSSRY 187

Query: 159 ALDAPMAFLRLLHYP------------GELVSSNQEV-CGASAHSDYGMITLLATDGVPG 205
             D P+   R+ +YP            GE    N +V  G   H+DYG++T+L  D V G
Sbjct: 188 TKD-PLILYRIFNYPSIISSGDDNKTTGESSDDNDKVEWGVGEHTDYGVLTILYQDDVGG 246

Query: 206 LQVCREKFNQPRLWEDVPNIKGALIVNIGDMMERWTNCLFRSTLHRV--MSSGQERYSAA 263
           LQV     +    W   P IKG  + NIGDM++R T  L+RST HRV    SG++R S  
Sbjct: 247 LQV-----HSKNGWISAPPIKGTFVCNIGDMLDRMTGGLYRSTPHRVELNRSGRDRISFP 301

Query: 264 FFLDPN 269
            F DPN
Sbjct: 302 LFFDPN 307

Dictyostelium discoideum (taxid: 44689)
EC: 1EC: .EC: 1EC: 4EC: .EC: -EC: .EC: -
>sp|A6BM06|ACCO1_DICMU 1-aminocyclopropane-1-carboxylate oxidase OS=Dictyostelium mucoroides GN=aco PE=3 SV=1 Back     alignment and function description
>sp|Q76NT9|ACCO1_DICDI 1-aminocyclopropane-1-carboxylate oxidase OS=Dictyostelium discoideum GN=aco PE=2 SV=1 Back     alignment and function description
>sp|Q7LL04|YQK1_SCHPO UPF0676 protein C1494.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1494.01 PE=3 SV=2 Back     alignment and function description
>sp|O04395|FLS_MATIN Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana PE=2 SV=1 Back     alignment and function description
>sp|Q9FFQ4|FLS5_ARATH Probable flavonol synthase 5 OS=Arabidopsis thaliana GN=FLS5 PE=2 SV=1 Back     alignment and function description
>sp|Q96330|FLS1_ARATH Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1 Back     alignment and function description
>sp|Q07512|FLS_PETHY Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1 Back     alignment and function description
>sp|Q9ZWQ9|FLS_CITUN Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1 Back     alignment and function description
>sp|Q9XHG2|FLS_MALDO Flavonol synthase/flavanone 3-hydroxylase OS=Malus domestica GN=FLS PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query308
118486587310 unknown [Populus trichocarpa] 0.996 0.990 0.737 1e-135
224074187310 predicted protein [Populus trichocarpa] 0.996 0.990 0.734 1e-134
255581297309 Flavonol synthase/flavanone 3-hydroxylas 0.993 0.990 0.728 1e-129
357476787322 Gibberellin 2-beta-dioxygenase [Medicago 0.993 0.950 0.694 1e-127
388521547322 unknown [Medicago truncatula] 0.993 0.950 0.688 1e-125
356510660318 PREDICTED: probable iron/ascorbate oxido 0.996 0.965 0.689 1e-124
357476785321 Flavonol synthase/flavanone 3-hydroxylas 0.990 0.950 0.672 1e-122
7594580305 hypothetical protein [Arabidopsis thalia 0.980 0.990 0.684 1e-119
357476781313 Flavonol synthase/flavanone 3-hydroxylas 0.977 0.961 0.646 1e-117
110289447 544 transposon protein, putative, unclassifi 0.980 0.555 0.639 1e-111
>gi|118486587|gb|ABK95132.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 228/309 (73%), Positives = 265/309 (85%), Gaps = 2/309 (0%)

Query: 1   MTEALQLPVIDLSSPDRLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFSLQ 60
           M E ++LP+IDLSSPDR+STAKSIRQAC+DYGFFYLVNHGVE +L+S++  ESKKFFSL 
Sbjct: 1   MAETVKLPIIDLSSPDRISTAKSIRQACVDYGFFYLVNHGVEGQLLSKVLEESKKFFSLP 60

Query: 61  LEDKMKLARKEHRGYTALCDEILDPSSTSEGDPKESFYIGPLEGTL--SSMNQWPSLEIL 118
           L +KMKL+RK HRGY+ L  E LDP S SEGD KESFY+GP+EG +  +++NQWPS EI 
Sbjct: 61  LNEKMKLSRKHHRGYSPLYAENLDPLSRSEGDSKESFYVGPVEGDMAQTNLNQWPSQEIF 120

Query: 119 PTWRSTMEYYHQKVLSAGRRLIHLIALALNLNEDFFEKVGALDAPMAFLRLLHYPGELVS 178
           P+WR TME YH+K++SAG++LI+LIA+ALNL+ED+FEKVGALD P  FLRLLHYPGEL  
Sbjct: 121 PSWRLTMESYHKKLMSAGKKLIYLIAMALNLDEDYFEKVGALDTPRGFLRLLHYPGELGC 180

Query: 179 SNQEVCGASAHSDYGMITLLATDGVPGLQVCREKFNQPRLWEDVPNIKGALIVNIGDMME 238
            N+++ GAS HSDYGMITLL +DGVPGLQVCREKF QPRLWEDVP+I GA IVNIGDMME
Sbjct: 181 FNEQIYGASEHSDYGMITLLVSDGVPGLQVCREKFKQPRLWEDVPHINGAFIVNIGDMME 240

Query: 239 RWTNCLFRSTLHRVMSSGQERYSAAFFLDPNGDCVVECLESCCSESNPPKFAPIRSGDYI 298
           RWTNCLFRSTLHRVM  GQERYS AFFLDPN DCVVECLESCCS S P +F PIRSG Y+
Sbjct: 241 RWTNCLFRSTLHRVMPVGQERYSLAFFLDPNPDCVVECLESCCSPSCPARFPPIRSGAYL 300

Query: 299 KERIRLTYG 307
           +ER +LTYG
Sbjct: 301 EERFKLTYG 309

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224074187|ref|XP_002304292.1| predicted protein [Populus trichocarpa] gi|222841724|gb|EEE79271.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255581297|ref|XP_002531459.1| Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis] gi|223528913|gb|EEF30909.1| Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357476787|ref|XP_003608679.1| Gibberellin 2-beta-dioxygenase [Medicago truncatula] gi|355509734|gb|AES90876.1| Gibberellin 2-beta-dioxygenase [Medicago truncatula] Back     alignment and taxonomy information
>gi|388521547|gb|AFK48835.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|356510660|ref|XP_003524054.1| PREDICTED: probable iron/ascorbate oxidoreductase DDB_G0283291-like [Glycine max] Back     alignment and taxonomy information
>gi|357476785|ref|XP_003608678.1| Flavonol synthase/flavanone 3-hydroxylase [Medicago truncatula] gi|355509733|gb|AES90875.1| Flavonol synthase/flavanone 3-hydroxylase [Medicago truncatula] Back     alignment and taxonomy information
>gi|7594580|emb|CAB88075.1| hypothetical protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|357476781|ref|XP_003608676.1| Flavonol synthase/flavanone 3-hydroxylase [Medicago truncatula] gi|355509731|gb|AES90873.1| Flavonol synthase/flavanone 3-hydroxylase [Medicago truncatula] Back     alignment and taxonomy information
>gi|110289447|gb|ABG66202.1| transposon protein, putative, unclassified, expressed [Oryza sativa Japonica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query308
TAIR|locus:504955434247 AT4G16765 [Arabidopsis thalian 0.792 0.987 0.626 5.5e-77
TAIR|locus:2203325329 AT1G35190 [Arabidopsis thalian 0.977 0.914 0.443 1.6e-70
TAIR|locus:2075125330 AT3G46490 [Arabidopsis thalian 0.964 0.9 0.437 5.2e-65
TAIR|locus:2078241286 AT3G46480 [Arabidopsis thalian 0.827 0.891 0.430 2.9e-55
TAIR|locus:2075130251 AT3G46500 [Arabidopsis thalian 0.756 0.928 0.421 2e-49
TIGR_CMR|SPO_2669317 SPO_2669 "oxidoreductase, 2OG- 0.948 0.921 0.333 4.3e-38
ASPGD|ASPL0000035942349 AN11188 [Emericella nidulans ( 0.948 0.836 0.334 7.2e-36
UNIPROTKB|G4NB73346 MGG_00611 "2OG-Fe(II) oxygenas 0.850 0.757 0.342 7.2e-36
DICTYBASE|DDB_G0277497368 aco "oxidoreductase" [Dictyost 0.529 0.442 0.333 1.8e-34
TAIR|locus:2042942353 AT2G38240 [Arabidopsis thalian 0.909 0.793 0.301 5e-28
TAIR|locus:504955434 AT4G16765 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
 Identities = 154/246 (62%), Positives = 173/246 (70%)

Query:    65 MKLARKEHRGYTALCDEILDPSSTSEGDPKESFYIGPLEGTLSSM--NQWPSLEILPTWR 122
             M L R++  GYT L  E LDPS +S GD KESFY G LEG L+    NQWPS  ILP+WR
Sbjct:     1 MALLRRDLLGYTPLYAEKLDPSLSSIGDSKESFYFGSLEGVLAQRYPNQWPSEGILPSWR 60

Query:   123 STMEYYHQKVLSAGXXXXXXXXXXXXXXEDFFEKVGALDAPMAFLRLLHYPGELVSSNQE 182
              TME Y++ VLS G              EDFFEKVGAL+ P A +RLL YPGE++SS+ E
Sbjct:    61 QTMETYYKNVLSVGRKLLGLIALALDLDEDFFEKVGALNDPTAVVRLLRYPGEVISSDVE 120

Query:   183 VCGASAHSDYGMITLLATDGVPGLQVCREKFNQPRLWEDVPNIKGALIVNIGDMMERWTN 242
               GASAHSDYGM+TLL TDGVPGLQVCR+K  QP +WEDVP IKGA IVNIGDMMERWTN
Sbjct:   121 TYGASAHSDYGMVTLLLTDGVPGLQVCRDKSKQPHIWEDVPGIKGAFIVNIGDMMERWTN 180

Query:   243 CLFRSTLHRVMSSGQERYSAAFFLDPNGDCVVXXXXXXXXXXNPPKFAPIRSGDYIKERI 302
              LFRSTLHRVM  G+ERYS  FFLDPN DC V           PP+F PI +GDYIKER 
Sbjct:   181 GLFRSTLHRVMPVGKERYSVVFFLDPNPDCNVKCLESCCSETCPPRFPPILAGDYIKERF 240

Query:   303 RLTYGS 308
             RLTY +
Sbjct:   241 RLTYAT 246
GO:0005506 "iron ion binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA;ISS
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2203325 AT1G35190 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075125 AT3G46490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078241 AT3G46480 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075130 AT3G46500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2669 SPO_2669 "oxidoreductase, 2OG-Fe(II) oxygenase family" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
ASPGD|ASPL0000035942 AN11188 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|G4NB73 MGG_00611 "2OG-Fe(II) oxygenase" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0277497 aco "oxidoreductase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TAIR|locus:2042942 AT2G38240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q7LL04YQK1_SCHPONo assigned EC number0.32480.94480.9065yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.110.691
4th Layer1.14.11.11LOW CONFIDENCE prediction!
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query308
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 1e-106
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 5e-80
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 6e-78
PLN02485329 PLN02485, PLN02485, oxidoreductase 1e-48
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 2e-42
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 3e-41
PLN02704335 PLN02704, PLN02704, flavonol synthase 2e-37
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 8e-37
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 9e-35
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 2e-34
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 2e-33
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 7e-32
PLN02997325 PLN02997, PLN02997, flavonol synthase 3e-30
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 4e-30
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 1e-28
PLN02216357 PLN02216, PLN02216, protein SRG1 6e-26
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 7e-26
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 8e-26
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 1e-24
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 3e-23
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 7e-23
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 1e-22
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 7e-22
PLN02904357 PLN02904, PLN02904, oxidoreductase 5e-20
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 3e-17
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 2e-13
PLN02947374 PLN02947, PLN02947, oxidoreductase 2e-13
PLN02947374 PLN02947, PLN02947, oxidoreductase 3e-12
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 1e-07
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information 
 Score =  313 bits (802), Expect = e-106
 Identities = 153/314 (48%), Positives = 209/314 (66%), Gaps = 18/314 (5%)

Query: 7   LPVIDLSSPDRLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFSLQLEDKMK 66
           L  IDL++ D   +  S++QAC+D GFFY++NHG+ EE +  +F +SKKFF+L LE+KMK
Sbjct: 15  LNCIDLANDDLNHSVASLKQACLDCGFFYVINHGINEEFMDDVFEQSKKFFALPLEEKMK 74

Query: 67  LARKE-HRGYTALCDEILDPSSTSEGDPKESFYIG------------PLEGTLSSMNQWP 113
           + R E HRGYT + DE LDP +   GD KE +YIG            P  G     N WP
Sbjct: 75  VLRNEKHRGYTPVLDEKLDPKNQINGDHKEGYYIGIEVPKDDPHWDKPFYGP----NPWP 130

Query: 114 SLEILPTWRSTMEYYHQKVLSAGRRLIHLIALALNLNEDFFEKVGALDAPMAFLRLLHYP 173
             ++LP WR TME YHQ+ L     +  L+ALAL+L+  +F++   L  P+A +RLL Y 
Sbjct: 131 DADVLPGWRETMEKYHQEALRVSMAIAKLLALALDLDVGYFDRTEMLGKPIATMRLLRYQ 190

Query: 174 GELVSSNQEVCGASAHSDYGMITLLATDGVPGLQVCREKFNQPRLWEDVPNIKGALIVNI 233
           G +   ++ +    AHSD+GM+TLLATDGV GLQ+C++K   P+ WE VP IKGA IVN+
Sbjct: 191 G-ISDPSKGIYACGAHSDFGMMTLLATDGVMGLQICKDKNAMPQKWEYVPPIKGAFIVNL 249

Query: 234 GDMMERWTNCLFRSTLHRVMSSGQERYSAAFFLDPNGDCVVECLESCCSESNPPKFAPIR 293
           GDM+ERW+N  F+STLHRV+ +GQERYS  FF++PN DC+VECL +C SES+ PK+ PI+
Sbjct: 250 GDMLERWSNGFFKSTLHRVLGNGQERYSIPFFVEPNHDCLVECLPTCKSESDLPKYPPIK 309

Query: 294 SGDYIKERIRLTYG 307
              Y+ +R   T+ 
Sbjct: 310 CSTYLTQRYEETHA 323

Length = 332
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 308
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02997325 flavonol synthase 100.0
PLN02485329 oxidoreductase 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02216357 protein SRG1 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02276361 gibberellin 20-oxidase 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02704335 flavonol synthase 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02904357 oxidoreductase 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02947374 oxidoreductase 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.93
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.91
PLN03176120 flavanone-3-hydroxylase; Provisional 99.78
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.05
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 95.31
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 94.46
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 94.36
PRK15401213 alpha-ketoglutarate-dependent dioxygenase AlkB; Pr 85.0
PRK08130213 putative aldolase; Validated 84.53
PRK08333184 L-fuculose phosphate aldolase; Provisional 83.48
PF13759101 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB 80.52
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information 
Probab=100.00  E-value=4.8e-80  Score=564.87  Aligned_cols=304  Identities=50%  Similarity=0.941  Sum_probs=266.2

Q ss_pred             CCCCCcEEeCCCcchHHHHHHHHHHHhhcceEEEEccCCCHHHHHHHHHHHHHhhcCCHHHHHHhhhcC-CCCeeecccc
Q 021741            3 EALQLPVIDLSSPDRLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFSLQLEDKMKLARKE-HRGYTALCDE   81 (308)
Q Consensus         3 ~~~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~-~~Gy~~~~~e   81 (308)
                      ...+||+|||+..++..++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++.... ++||.+.+.+
T Consensus        11 ~~~~iP~IDl~~~~~~~~~~~l~~Ac~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~k~~~~~~~~GY~~~~~e   90 (332)
T PLN03002         11 KVSSLNCIDLANDDLNHSVASLKQACLDCGFFYVINHGINEEFMDDVFEQSKKFFALPLEEKMKVLRNEKHRGYTPVLDE   90 (332)
T ss_pred             CCCCCCEEeCCchhHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCCCcCccccc
Confidence            456899999997667778999999999999999999999999999999999999999999999986555 8999988777


Q ss_pred             ccCCCCCCCCCcceeeecC---CCCC-----CCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccc
Q 021741           82 ILDPSSTSEGDPKESFYIG---PLEG-----TLSSMNQWPSLEILPTWRSTMEYYHQKVLSAGRRLIHLIALALNLNEDF  153 (308)
Q Consensus        82 ~~~~~~~~~~d~~E~f~~~---p~~~-----~~~~~~~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~  153 (308)
                      ..+.......||+|.|+++   |.++     .+.++|.||..+.+|+||+.+++|+++|.+|+..||++|+++||+++++
T Consensus        91 ~~~~~~~~~~d~kE~f~~~~~~p~~~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~  170 (332)
T PLN03002         91 KLDPKNQINGDHKEGYYIGIEVPKDDPHWDKPFYGPNPWPDADVLPGWRETMEKYHQEALRVSMAIAKLLALALDLDVGY  170 (332)
T ss_pred             ccccccCCCCcceeeeEecccCCCCCccccccccCCCCCcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHH
Confidence            6544332246999999988   3332     2345899998645689999999999999999999999999999999999


Q ss_pred             ccccccccCccceeeeccCCCCCCCCCCCccccccccCcCceeEEecCCCCceeEeeCCCCCCCceEEccCCCCeEEEEc
Q 021741          154 FEKVGALDAPMAFLRLLHYPGELVSSNQEVCGASAHSDYGMITLLATDGVPGLQVCREKFNQPRLWEDVPNIKGALIVNI  233 (308)
Q Consensus       154 ~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g~lTlL~qd~~~GLqv~~~~~~~~~~W~~v~p~~g~~vvnv  233 (308)
                      |.+...+..+.+.||++|||||+.+ ....+|+++|||+|+||||+||+++||||+.+++..+++|++|+|.||++||||
T Consensus       171 f~~~~~~~~~~~~lrl~~YP~~~~~-~~~~~g~~~HTD~g~lTlL~qd~v~GLQV~~~~~~~~g~Wi~Vpp~pg~~VVNi  249 (332)
T PLN03002        171 FDRTEMLGKPIATMRLLRYQGISDP-SKGIYACGAHSDFGMMTLLATDGVMGLQICKDKNAMPQKWEYVPPIKGAFIVNL  249 (332)
T ss_pred             hccccccCCCchheeeeeCCCCCCc-ccCccccccccCCCeEEEEeeCCCCceEEecCCCCCCCcEEECCCCCCeEEEEH
Confidence            9821245556789999999998754 235789999999999999999999999998754212346999999999999999


Q ss_pred             CchhHHhhcCcccccccccCCCCCCceeeeeccCCCCCceEecCCcccCCCCCCCCCCccHHHHHHHHHHHHhC
Q 021741          234 GDMMERWTNCLFRSTLHRVMSSGQERYSAAFFLDPNGDCVVECLESCCSESNPPKFAPIRSGDYIKERIRLTYG  307 (308)
Q Consensus       234 Gd~l~~~TnG~~~s~~HRV~~~~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~~~y~~~t~~e~~~~~~~~~~~  307 (308)
                      ||+|++||||+|||++|||+.++.+||||+||++|+.|++|.|+++++++++|++|+++|++||+..++...|.
T Consensus       250 GD~L~~wTng~~kSt~HRVv~~~~~R~Sia~F~~p~~d~~i~pl~~~~~~~~p~~y~~~~~~e~l~~~~~~~~~  323 (332)
T PLN03002        250 GDMLERWSNGFFKSTLHRVLGNGQERYSIPFFVEPNHDCLVECLPTCKSESDLPKYPPIKCSTYLTQRYEETHA  323 (332)
T ss_pred             HHHHHHHhCCeeECcCCeecCCCCCeeEEEEEecCCCCeeEecCCcccCCCCcccCCCccHHHHHHHHHHHHhh
Confidence            99999999999999999999887899999999999999999999999999999999999999999999999885

>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional Back     alignment and domain information
>PRK08130 putative aldolase; Validated Back     alignment and domain information
>PRK08333 L-fuculose phosphate aldolase; Provisional Back     alignment and domain information
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query308
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 1e-17
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 3e-17
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 3e-17
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 3e-17
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 3e-16
1w9y_A319 The Structure Of Acc Oxidase Length = 319 6e-15
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 3e-13
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 4e-13
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure 
Iteration: 1

 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 49/288 (17%)
Query: 6   QLPVIDLSSPDRLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFSLQLEDKM 65
           +L  ID  + D   +AK   ++  + GF  L NH +++EL+ +++ E + FF+ + +++ 
Sbjct: 3   KLETIDYRAAD---SAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNSEAKNEF 59
Query: 66  KLARKEHRGYTALCDEILDPSSTSE-------GDPKESFYIGPLEGTLSSMNQWPSLEIL 118
              R+ H G+         P+S SE        D KE +++            +P   I 
Sbjct: 60  XFNRETHDGFF--------PASISETAKGHTVKDIKEYYHV------------YPWGRIP 99
Query: 119 PTWRSTMEYYHQKVLSAGXXXXXXXXXXXXXXEDFFEKVGALDAP-------MAFLRLLH 171
            + R+ +  Y++K   A                D  +   ++  P          LR+LH
Sbjct: 100 DSLRANILAYYEK---ANTLASELLEWIETYSPDEIKAKFSIPLPEXIANSHKTLLRILH 156
Query: 172 YPGELVSSNQEVCGASAHSDYGMITLLATDGVPGLQVCREKFNQPRLWEDVPNIKGALIV 231
           YP            A+AH D  +IT+L T   PGLQV  +  +    W DVP+  G +I+
Sbjct: 157 YPPXTGDEEXGAIRAAAHEDINLITVLPTANEPGLQVKAKDGS----WLDVPSDFGNIII 212
Query: 232 NIGDMMERWTNCLFRSTLHRVMS-----SGQERYSAAFFLDPNGDCVV 274
           NIGD ++  ++  F ST HRV++       + R S   FL P+   V+
Sbjct: 213 NIGDXLQEASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVL 260
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query308
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 1e-135
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 1e-126
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 1e-121
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 1e-114
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 8e-75
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 2e-72
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
 Score =  385 bits (991), Expect = e-135
 Identities = 86/322 (26%), Positives = 148/322 (45%), Gaps = 29/322 (9%)

Query: 1   MTEALQLPVIDLS--SPDRLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFS 58
           M+ +  +  +  S  + D    A+ +  +   YGF  L ++ +++  I    + +K FF+
Sbjct: 2   MSTS-AIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFA 60

Query: 59  LQLEDKMKLARKE--HRGYTALCDEILDPSSTSEGDPKESFYIGP------LEGTLSSMN 110
           L +E K + A  +   RGY     E    +     D KE +++G             + N
Sbjct: 61  LPVETKKQYAGVKGGARGYIPFGVETAKGADH--YDLKEFWHMGRDLPPGHRFRAHMADN 118

Query: 111 QWPSLEILPTWRSTMEYYHQKVLSAGRRLIHLIALALNLNEDFFEKVGALDAPMAFLRLL 170
            WP    +P ++  + + +  +   G +++  IA  L L  DFF+    +    + LRLL
Sbjct: 119 VWP--AEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKP--TVQDGNSVLRLL 174

Query: 171 HYPGELVSSNQEVCGASAHSDYGMITLLATDGVPGLQVCREKFNQPRLWEDVPNIKGALI 230
           HYP   +  +     A AH D   ITLL      GL+V          W  +    G L+
Sbjct: 175 HYPP--IPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQ----WLPINPPPGCLV 228

Query: 231 VNIGDMMERWTNCLFRSTLHRVMS-----SGQERYSAAFFLDPNGDCVVECLESCCSESN 285
           +NIGDM+ER TN +  ST+HRV++      G  RYS  FFL    D  ++ L++C +  N
Sbjct: 229 INIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAEN 288

Query: 286 PPKFA-PIRSGDYIKERIRLTY 306
           P ++   I + +++++R+R   
Sbjct: 289 PDRYPESITADEFLQQRLREIK 310
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query308
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 94.81
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 92.39
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 90.81
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 87.3
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 82.52
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
Probab=100.00  E-value=4.5e-79  Score=554.85  Aligned_cols=292  Identities=29%  Similarity=0.499  Sum_probs=259.2

Q ss_pred             CCCCCCcEEeCCC--cchHHHHHHHHHHHhhcceEEEEccCCCHHHHHHHHHHHHHhhcCCHHHHHHhhh-cC-CCCeee
Q 021741            2 TEALQLPVIDLSS--PDRLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFSLQLEDKMKLAR-KE-HRGYTA   77 (308)
Q Consensus         2 ~~~~~iPvIDl~~--~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~-~~-~~Gy~~   77 (308)
                      |...+||||||+.  .++++++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.. .. ++||.+
T Consensus         2 m~~~~iPvIDls~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~   81 (312)
T 3oox_A            2 MSTSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIP   81 (312)
T ss_dssp             --CCSSCCEETHHHHHCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEEC
T ss_pred             CCCCCCCeEEChHhcccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCcccccc
Confidence            4567899999984  3577889999999999999999999999999999999999999999999999865 33 899999


Q ss_pred             ccccccCCCCCCCCCcceeeecCCC---CC---CCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCc
Q 021741           78 LCDEILDPSSTSEGDPKESFYIGPL---EG---TLSSMNQWPSLEILPTWRSTMEYYHQKVLSAGRRLIHLIALALNLNE  151 (308)
Q Consensus        78 ~~~e~~~~~~~~~~d~~E~f~~~p~---~~---~~~~~~~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~  151 (308)
                      .+.+.....  ...||+|+|+++..   ++   ....+|.||+.  +|+||+.+++|+++|.+++.+||++|+++||+++
T Consensus        82 ~g~e~~~~~--~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~--~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~  157 (312)
T 3oox_A           82 FGVETAKGA--DHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAE--IPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLER  157 (312)
T ss_dssp             CCCCCSTTS--CSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTT--STTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCT
T ss_pred             ccceecCCC--CCCCceeeeEeecCCCcCCcchhccCCCCCCCc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCH
Confidence            887765432  24799999999731   11   22457999986  4999999999999999999999999999999999


Q ss_pred             ccccccccccCccceeeeccCCCCCCCCCCCccccccccCcCceeEEecCCCCceeEeeCCCCCCCceEEccCCCCeEEE
Q 021741          152 DFFEKVGALDAPMAFLRLLHYPGELVSSNQEVCGASAHSDYGMITLLATDGVPGLQVCREKFNQPRLWEDVPNIKGALIV  231 (308)
Q Consensus       152 ~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g~lTlL~qd~~~GLqv~~~~~~~~~~W~~v~p~~g~~vv  231 (308)
                      ++|.  +.+..+.+.+|++|||||+.+. .. +|+++|||+|+||||+||+++||||+.++|+    |++|+|.||++||
T Consensus       158 ~~f~--~~~~~~~~~lr~~~Ypp~~~~~-~~-~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~----W~~V~p~pg~~vV  229 (312)
T 3oox_A          158 DFFK--PTVQDGNSVLRLLHYPPIPKDA-TG-VRAGAHGDINTITLLLGAEEGGLEVLDRDGQ----WLPINPPPGCLVI  229 (312)
T ss_dssp             TTTH--HHHTTCCCEEEEEEECCCSSCC-C---CEEEECCCSSEEEEECCTTSCEEEECTTSC----EEECCCCSSCEEE
T ss_pred             HHHH--HHhcCCcceeeeEecCCCCCCc-CC-cCccceecCceEEEEeEcCcCceEEECCCCc----EEECCCCCCeEEE
Confidence            9999  7777788999999999998752 33 9999999999999999999999999987665    9999999999999


Q ss_pred             EcCchhHHhhcCcccccccccCCC-----CCCceeeeeccCCCCCceEecCCcccCCCCCCCCC-CccHHHHHHHHHHHH
Q 021741          232 NIGDMMERWTNCLFRSTLHRVMSS-----GQERYSAAFFLDPNGDCVVECLESCCSESNPPKFA-PIRSGDYIKERIRLT  305 (308)
Q Consensus       232 nvGd~l~~~TnG~~~s~~HRV~~~-----~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~~~y~-~~t~~e~~~~~~~~~  305 (308)
                      ||||+||+||||+|||+.|||+++     +.+|||++||++|+.|++|+|+++++++++|++|+ ++|++||+..|+++.
T Consensus       230 NiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~~  309 (312)
T 3oox_A          230 NIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLREI  309 (312)
T ss_dssp             EECHHHHHHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHHH
T ss_pred             EhHHHHHHHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHHh
Confidence            999999999999999999999985     45799999999999999999999999999999999 999999999999865
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 308
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 2e-65
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 1e-61
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 6e-58
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 3e-53
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  207 bits (527), Expect = 2e-65
 Identities = 73/309 (23%), Positives = 147/309 (47%), Gaps = 18/309 (5%)

Query: 3   EALQLPVIDLSSPD------RLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKF 56
           +  Q+P IDL + +      R +  + +++A +D+G  +L+NHG+  +L+ ++    ++F
Sbjct: 42  DGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEF 101

Query: 57  FSLQLEDKMKLARKEHRGYTALCDEILDPSSTSEGDPKESFYIGPLEGTLSSMNQWPSLE 116
           FSL +E+K K A  +  G        L  +++ + + ++ F+          ++ WP  +
Sbjct: 102 FSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWP--K 159

Query: 117 ILPTWRSTMEYYHQKVLSAGRRLIHLIALALNLNEDFFEK-VGALDAPMAFLRLLHYPGE 175
               +      Y + +     ++   +++ L L  D  EK VG L+  +  +++ +YP  
Sbjct: 160 TPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPK- 218

Query: 176 LVSSNQEVCGASAHSDYGMITLLATDGVPGLQVCREKFNQPRLWEDVPNIKGALIVNIGD 235
                +   G  AH+D   +T +  + VPGLQ+  E       W     +  +++++IGD
Sbjct: 219 -CPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGK-----WVTAKCVPDSIVMHIGD 272

Query: 236 MMERWTNCLFRSTLHRVMS-SGQERYSAAFFLDPNGDCVV-ECLESCCSESNPPKFAPIR 293
            +E  +N  ++S LHR +    + R S A F +P  D +V + L    S  +P KF P  
Sbjct: 273 TLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRT 332

Query: 294 SGDYIKERI 302
              +I+ ++
Sbjct: 333 FAQHIEHKL 341
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query308
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 90.19
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: 1-aminocyclopropane-1-carboxylate oxidase 1
species: Petunia hybrida [TaxId: 4102]

Probab=100.00  E-value=2.6e-72  Score=508.17  Aligned_cols=279  Identities=28%  Similarity=0.502  Sum_probs=240.0

Q ss_pred             CCcEEeCC---CcchHHHHHHHHHHHhhcceEEEEccCCCHHHHHHHHHHHHHhhcCCHHHHHHhhhcC--CCCeeeccc
Q 021741            6 QLPVIDLS---SPDRLSTAKSIRQACIDYGFFYLVNHGVEEELISQMFNESKKFFSLQLEDKMKLARKE--HRGYTALCD   80 (308)
Q Consensus         6 ~iPvIDl~---~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~--~~Gy~~~~~   80 (308)
                      +||||||+   ..++++++++|.+||+++|||||+||||+.++++++++++++||++|.|+|+++....  ++||.+.. 
T Consensus         2 ~lPvIDl~~~~~~~r~~~~~~l~~A~~~~GFF~l~nHGI~~~li~~~~~~~~~fF~lp~e~K~k~~~~~~~~~g~~~~~-   80 (307)
T d1w9ya1           2 NFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQAEV-   80 (307)
T ss_dssp             CCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCG-
T ss_pred             CCCeEECcccCCcCHHHHHHHHHHHHHcCeEEEEEcCCCCHHHHHHHHHHHHHHHhCcHHHhhhhhcCCCCCcCccccc-
Confidence            69999998   3467888999999999999999999999999999999999999999999999865543  66775421 


Q ss_pred             cccCCCCCCCCCcceeeecCCCCCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcccccccccc
Q 021741           81 EILDPSSTSEGDPKESFYIGPLEGTLSSMNQWPSLEILPTWRSTMEYYHQKVLSAGRRLIHLIALALNLNEDFFEKVGAL  160 (308)
Q Consensus        81 e~~~~~~~~~~d~~E~f~~~p~~~~~~~~~~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~  160 (308)
                        .      ..||+|.|++...  .....+.||+.+  ++|++.+++|++.|.+|+.+|+++|+++||+++++|.  +.+
T Consensus        81 --~------~~d~~e~~~~~~~--~~~~~~~~~~~~--~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~--~~~  146 (307)
T d1w9ya1          81 --T------DMDWESTFFLKHL--PISNISEVPDLD--EEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLK--NAF  146 (307)
T ss_dssp             --G------GCCCCEEEEEEEE--SCCGGGGCTTCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHH--HHH
T ss_pred             --c------ccChhhhcccccc--cccCcccCCccc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHH--hhh
Confidence              1      3599999998722  123456788764  8999999999999999999999999999999999998  554


Q ss_pred             ---cCccceeeeccCCCCCCCCCCCccccccccCcCceeEEecC-CCCceeEeeCCCCCCCceEEccCCCCeEEEEcCch
Q 021741          161 ---DAPMAFLRLLHYPGELVSSNQEVCGASAHSDYGMITLLATD-GVPGLQVCREKFNQPRLWEDVPNIKGALIVNIGDM  236 (308)
Q Consensus       161 ---~~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~g~lTlL~qd-~~~GLqv~~~~~~~~~~W~~v~p~~g~~vvnvGd~  236 (308)
                         ..+.+.+|++||||++.+  ....|+++|||+|+||||+|+ .++||||..+++     |++|+|.+|++|||+||+
T Consensus       147 ~~~~~~~~~lr~~~YP~~~~~--~~~~g~~~HtD~~~lTlL~q~~~~ggl~~~~~g~-----Wi~v~p~~~~~vVnvGD~  219 (307)
T d1w9ya1         147 YGSKGPNFGTKVSNYPPCPKP--DLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQ-----WIDVPPMRHSIVVNLGDQ  219 (307)
T ss_dssp             HTTTCCEEEEEEEECCCCSCG--GGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTE-----EEECCCCTTCEEEEECHH
T ss_pred             hccccccccceecCCCCCccc--ccccccccccccceeEEeeccCCCCeEEEecCCc-----EEEeccCCCeEEEEcchh
Confidence               335788999999998764  567899999999999999996 579999987544     999999999999999999


Q ss_pred             hHHhhcCcccccccccCCC-CCCceeeeeccCCCCCceEecCCcccC---CCCCCCCCCccHHHHHHHHHHHHh
Q 021741          237 MERWTNCLFRSTLHRVMSS-GQERYSAAFFLDPNGDCVVECLESCCS---ESNPPKFAPIRSGDYIKERIRLTY  306 (308)
Q Consensus       237 l~~~TnG~~~s~~HRV~~~-~~~R~Si~~F~~p~~d~~i~p~~~~~~---~~~~~~y~~~t~~e~~~~~~~~~~  306 (308)
                      |++||||+||||.|||+.+ +.+||||+||++|+.|++|.|++++++   +++|++|+++|++||++.++++.|
T Consensus       220 l~~~Tng~~kSt~HRVv~~~~~~R~Si~~F~~p~~d~~i~p~~~~v~~~~~~~p~~y~~~t~~ey~~~~~~~~~  293 (307)
T d1w9ya1         220 LEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKF  293 (307)
T ss_dssp             HHHHTTTSSCCCCEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTC
T ss_pred             hHHhhCCcccCcCceeecCCCCCcEEEEEEeeCCCCCEEeCCHHHhcccCccCCCCCCCeeHHHHHHHHHhccC
Confidence            9999999999999999984 679999999999999999999999986   467899999999999988776655
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure