Citrus Sinensis ID: 021819

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------
Protein Sequence
MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFVFQSPLRFILWLAIILPHEKNGVTYSIK
Secondary Structure (PSIPRED)
ccccccccccEEEEcccccHHHHHHHHHHHHccccEEEEEEccccccHHHHcccccccccEEEEEccccccccHHHHHccccEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHccccEEEEEcccEEEEcccccccccccccccccHHHHHcccccHHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccccHHHHHHHHHccccccccccccccEEHHHHHHHHHHHHccccccccEEEEcccccHHHHHHHHHHHccccccccccccccHHHHHHHHHHcccccccEEEEcc
Secondary Structure Prediction (SSPRO)
ccccccccccEEEEEccHHHHHHHHHHHHHHcccEEEEEEEccccccHHHHHcccccHHccEEEEEcccccccHHHHHcccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccEEEEcccccccccccccccccHHHHHHcccEEHHHHHHHHHHHHHHHHHccccEEEEEccEEEcccccccccHHHHHHHHHHcccHHHHHHHHccEEEHHHHHHHHHHHHcccccccEEEEEcccccHHHHHHHHHHHcccccccccccccccccEEEEEHHHHHHcccEEEEEc
Coil and Loop (DISEMBL)
MASEAEKEEETVCVTGANGFIGTWLVKTLLdnnytsinatvfpgsdsshlfalpgagdanlRVFEADVLDSGAVSRAVEGckgvfhvaspctledpvdpekeliLPAVQGTLNVLEAAKRFGVRRVVVTSSIsaivpnpgwkgkvfdetswtdleycksrkkwypvSKTLAEKAAWEFAEKHgvdvvaihpatclgplmqpylNASCAVLQQLLQgskdtqeyhwlgavpvkdVAKAQVLLFespaasgrylctnGIYQFGDFAERvsklfpefpvhrfvfqsPLRFILWLAIIlphekngvtysik
Flexible Loop (DISEMBL)
maseaekeeetvcvtgangFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTssisaivpnpgwkgkvfdetsWTDLeycksrkkwypVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFespaasgrylCTNGIYQFGDFAERVSKLFPEFPVHRFVFQSPLRFILWLAIIlphekngvtysik
Low Complexity Region (SEG)
MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFVFQSPLRFILWLAIILPHEKNGVTYSIK
Disordered region (IsUnstruct)
**********TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFVFQSPLRFILWLAIILPHEKNGV*****
Disordered Region (DISOPRED)
*************VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFVFQSPLRFILWLAIILPHEKNGVTYSI*
Disordered Region (DISEMBL)
***********VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFVFQSPLRFILWLAIILPHEKNGVTYSIK
Disordered Region (DISPRO)
********EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFVFQSPLRFILWLAIILPHEKNGVTYSIK
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFVFQSPLRFILWLAIILPHEKNGVTYSIK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	307	2.2.26 [Sep-21-2011]
Q500U8	326	Tetraketide alpha-pyrone	no	no	0.859	0.809	0.394	5e-53
Q9S9N9	344	Cinnamoyl-CoA reductase 1	no	no	0.846	0.755	0.444	2e-49
Q9SAH9	332	Cinnamoyl-CoA reductase 2	no	no	0.840	0.777	0.425	8e-47
Q9XES5	348	Bifunctional dihydroflavo	N/A	no	0.866	0.764	0.362	1e-44
Q84KP0	347	Bifunctional dihydroflavo	N/A	no	0.866	0.766	0.358	4e-44
P51110	337	Dihydroflavonol-4-reducta	no	no	0.863	0.786	0.375	2e-43
P51102	382	Dihydroflavonol-4-reducta	no	no	0.856	0.688	0.394	5e-42
P14720	380	Dihydroflavonol-4-reducta	N/A	no	0.840	0.678	0.392	1e-41
P51104	360	Dihydroflavonol-4-reducta	N/A	no	0.850	0.725	0.365	2e-41
P51106	354	Dihydroflavonol-4-reducta	N/A	no	0.824	0.714	0.370	1e-40

>sp|Q500U8|TKPR1_ARATH Tetraketide alpha-pyrone reductase 1 OS=Arabidopsis thaliana GN=TKPR1 PE=2 SV=1

 Score =  208 bits (529), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 109/276 (39%), Positives = 179/276 (64%), Gaps = 12/276 (4%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGAGDANLRVFEADVL 69
           VCVTGA+GF+ +WLVK LL   Y  I     PG++   +HL+ L GA +  LR+ +AD++
Sbjct: 8   VCVTGASGFLASWLVKRLLLEGYEVIGTVRDPGNEKKLAHLWKLEGAKE-RLRLVKADLM 66

Query: 70  DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVV 128
           + G+   A+ GC+GVFH ASP  L+   +PE+E++ PA++GTLNVL + ++   ++RVV+
Sbjct: 67  EEGSFDNAIMGCQGVFHTASP-VLKPTSNPEEEILRPAIEGTLNVLRSCRKNPSLKRVVL 125

Query: 129 TSSISAIVPNPGWKGKV-FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVV 187
           TSS S +     +  K+  DE+ WT +E CK  + WY +SKTLAE+AAW+F+E++G+D+V
Sbjct: 126 TSSSSTVRIRDDFDPKIPLDESIWTSVELCKRFQVWYALSKTLAEQAAWKFSEENGIDLV 185

Query: 188 AIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW---LGAVPVKDVAKAQVLLFES 244
            + P+  +GP + P L ++ + +  LL+G  +T+++ W   +G V + DVA+  +++FE 
Sbjct: 186 TVLPSFLVGPSLPPDLCSTASDVLGLLKG--ETEKFQWHGQMGYVHIDDVARTHIVVFEH 243

Query: 245 PAASGRYLCTNGIYQFGDFAERVSKLFPEFPV-HRF 279
            AA GRY+C++ +    +    +S  +P  P+  RF
Sbjct: 244 EAAQGRYICSSNVISLEELVSFLSARYPSLPIPKRF 279

Involved in the biosynthesis of hydroxylated tetraketide compounds that serve as sporopollenin precursors (the main constituents of exine). Is essential for pollen wall development. Acts on tetraketide alpha-pyrones and reduces the carbonyl function on the tetraketide alkyl chain to a secondary alcohol function.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1

 Score =  196 bits (498), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/270 (44%), Positives = 169/270 (62%), Gaps = 10/270 (3%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGDANLRVFEAD 67
           +TVCVTGA G+I +W+VK LL+  YT +  TV    D  ++HL  L G G   L + +AD
Sbjct: 11  KTVCVTGAGGYIASWIVKILLERGYT-VKGTVRNPDDPKNTHLRELEG-GKERLILCKAD 68

Query: 68  VLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV 127
           + D  A+  A++GC GVFH ASP T     DPE +++ PAV G   V+ AA    V+RVV
Sbjct: 69  LQDYEALKAAIDGCDGVFHTASPVT----DDPE-QMVEPAVNGAKFVINAAAEAKVKRVV 123

Query: 128 VTSSISAIVPNPGWKGK-VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
           +TSSI A+  +P    + V DE+ W+DL++CK+ K WY   K +AE+AAWE A++ GVD+
Sbjct: 124 ITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDL 183

Query: 187 VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA 246
           V ++P   LGP +QP +NAS   + + L GS  T        V V+DVA A VL++E+P+
Sbjct: 184 VVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPS 243

Query: 247 ASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
           ASGRYL        G+  E ++KLFPE+P+
Sbjct: 244 ASGRYLLAESARHRGEVVEILAKLFPEYPL 273

Involved in the latter stages of lignin biosynthesis. Catalyzes one of the last steps of monolignol biosynthesis, the conversion of cinnamoyl-CoAs into their corresponding cinnamaldehydes.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 4

EC: 4

>sp|Q9SAH9|CCR2_ARATH Cinnamoyl-CoA reductase 2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1

 Score =  187 bits (475), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 114/268 (42%), Positives = 164/268 (61%), Gaps = 10/268 (3%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGDANLRVFEADVL 69
           VCVTGA G+I +W+VK LL+  YT +  TV   +D  ++HL  L GA +  L +  AD+L
Sbjct: 8   VCVTGAGGYIASWIVKLLLERGYT-VRGTVRNPTDPKNNHLRELQGAKE-RLTLHSADLL 65

Query: 70  DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
           D  A+   ++GC GVFH ASP T +DP    + ++ PAV G   V++AA +  V+RVV T
Sbjct: 66  DYEALCATIDGCDGVFHTASPMT-DDP----ETMLEPAVNGAKFVIDAAAKAKVKRVVFT 120

Query: 130 SSISAIVPNPGWKGK-VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVA 188
           SSI A+  NP    + + DE  W+DL++CK+ K WY   K LAE++AWE A+  GVD+V 
Sbjct: 121 SSIGAVYMNPNRDTQAIVDENCWSDLDFCKNTKNWYCYGKMLAEQSAWETAKAKGVDLVV 180

Query: 189 IHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAAS 248
           ++P   LGP +Q  +NAS   + + L GS  T        V V+DVA   VL++E+P+AS
Sbjct: 181 LNPVLVLGPPLQSAINASLVHILKYLTGSAKTYANLTQVYVDVRDVALGHVLVYEAPSAS 240

Query: 249 GRYLCTNGIYQFGDFAERVSKLFPEFPV 276
           GRY+        G+  E ++K FPE+P+
Sbjct: 241 GRYILAETALHRGEVVEILAKFFPEYPL 268

Cinnamoyl-CoA reductase probably involved in the formation of phenolic compounds associated with the hypersensitive response. Seems not to be involved in lignin biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 4

EC: 4

>sp|Q9XES5|DFRA_MALDO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1

 Score =  180 bits (457), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 100/276 (36%), Positives = 164/276 (59%), Gaps = 10/276 (3%)

Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS---HLFALPGAGDANLRVF 64
           E E+VCVTGA+GFIG+WLV  LL++ YT + ATV   ++     HL  LP A + +L ++
Sbjct: 4   ESESVCVTGASGFIGSWLVMRLLEHGYT-VRATVRDPTNQKKVKHLLDLPKA-ETHLTLW 61

Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           +AD+ D G+   A++GC GVFHVA+P   E   DPE E+I P + G L++L+A ++    
Sbjct: 62  KADLADEGSFDEAIQGCSGVFHVATPMDFESK-DPENEVIKPTINGLLDILKACQKAKTV 120

Query: 125 RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK--W-YPVSKTLAEKAAWEFAEK 181
           R +V +S +  V     +  V+DE++W+D+E+C+S K   W Y VSKTLAE+AAW++A++
Sbjct: 121 RKLVFTSSAGTVNVEEHQKPVYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKE 180

Query: 182 HGVDVVAIHPATCLGPLMQPYLNASCAV-LQQLLQGSKDTQEYHWLGAVPVKDVAKAQVL 240
           + +D + I P   +GP + P +  S    L  +L+             V + D+  + + 
Sbjct: 181 NNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRNESHYGIIKQGQYVHLDDLCLSHIY 240

Query: 241 LFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
           L+E P A GRY+C++      +  + + + +PE+ +
Sbjct: 241 LYEHPKAEGRYICSSHDATIHELVKMLREKYPEYNI 276

Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, dihydrokaempferol, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), naringenin to a low extent (10%), but not 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate.

Malus domestica (taxid: 3750)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 4

>sp|Q84KP0|DFRA_PYRCO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1

 Score =  178 bits (452), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 99/276 (35%), Positives = 164/276 (59%), Gaps = 10/276 (3%)

Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS---HLFALPGAGDANLRVF 64
           E E+VCVTGA+GFIG+WLV  LL++ YT + ATV   ++     HL  LP A + +L ++
Sbjct: 4   ESESVCVTGASGFIGSWLVMRLLEHGYT-VRATVRDPTNQKKVKHLLDLPKA-ETHLTLW 61

Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           +AD+ D G+   A++GC GVFHVA+P   E   DPE E+I P + G L++L+A ++    
Sbjct: 62  KADLADEGSFDEAIQGCSGVFHVATPMDFESR-DPENEVIKPTINGLLDILKACQKAKTV 120

Query: 125 RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK--W-YPVSKTLAEKAAWEFAEK 181
           R +V +S +  V     +  V+DE++W+D+E+C+S K   W Y VSKTLAE+AAW++A++
Sbjct: 121 RKLVFTSSAGTVNVEEHQKPVYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKE 180

Query: 182 HGVDVVAIHPATCLGPLMQPYLNASCAV-LQQLLQGSKDTQEYHWLGAVPVKDVAKAQVL 240
           + +D + I P   +GP + P +  S    L  +L+             V + D+  + + 
Sbjct: 181 NNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRNESHYGIIKQGQYVHLDDLCLSHIY 240

Query: 241 LFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
           L++ P A GRY+C++      +  + + + +PE+ +
Sbjct: 241 LYKHPKAEGRYICSSHDATIHELVKMLREKYPEYNI 276

Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), dihydrokaempferol to a low extent (5%), but not naringenin, 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate.

Pyrus communis (taxid: 23211)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 4

>sp|P51110|DFRA_VITVI Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1

 Score =  176 bits (447), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/277 (37%), Positives = 166/277 (59%), Gaps = 12/277 (4%)

Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS---HLFALPGAGDANLRVF 64
           + ETVCVTGA+GFIG+WLV  LL+   T + ATV   ++     HL  LP A + +L ++
Sbjct: 4   QSETVCVTGASGFIGSWLVMRLLERRLT-VRATVRDPTNVKKVKHLLDLPKA-ETHLTLW 61

Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA-AKRFGV 123
           +AD+ D G+   A++GC GVFHVA+P   E   DPE E+I P ++G L ++++ A    V
Sbjct: 62  KADLADEGSFDEAIKGCTGVFHVATPMDFESK-DPENEVIKPTIEGMLGIMKSCAAAKTV 120

Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK--KW-YPVSKTLAEKAAWEFAE 180
           RR+V TSS +  V     +  V+DE+ W+D+E+C+++K   W Y VSKTLAE+AAW++A+
Sbjct: 121 RRLVFTSS-AGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAK 179

Query: 181 KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA-VPVKDVAKAQV 239
           ++ +D + I P   +GP +   +  S       + G++        G  V + D+  A +
Sbjct: 180 ENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHI 239

Query: 240 LLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
            LFE+P A GRY+C++      D A+ + + +PE+ +
Sbjct: 240 YLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNI 276

Vitis vinifera (taxid: 29760)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51102|DFRA_ARATH Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=3 SV=2

 Score =  171 bits (434), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 110/279 (39%), Positives = 160/279 (57%), Gaps = 16/279 (5%)

Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGS--DSSHLFALPGAGDANLRVF 64
           ++ETVCVTGA+GFIG+WLV  LL+  Y  + ATV  PG+     HL  LP A    L ++
Sbjct: 4   QKETVCVTGASGFIGSWLVMRLLERGYF-VRATVRDPGNLKKVQHLLDLPNAKTL-LTLW 61

Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA-AKRFGV 123
           +AD+ + G+   A+ GC GVFHVA+P   E   DPE E+I P V G L +++A  K   V
Sbjct: 62  KADLSEEGSYDDAINGCDGVFHVATPMDFESK-DPENEVIKPTVNGMLGIMKACVKAKTV 120

Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK--W-YPVSKTLAEKAAWEFAE 180
           RR V TSS   +      K  V+DE  W+DLE+  S+K   W Y VSKTLAEKAAW+FAE
Sbjct: 121 RRFVFTSSAGTVNVEEHQKN-VYDENDWSDLEFIMSKKMTGWMYFVSKTLAEKAAWDFAE 179

Query: 181 KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA---VPVKDVAKA 237
           + G+D ++I P   +GP +   +  S  ++  L   +++   Y  +     V + D+  A
Sbjct: 180 EKGLDFISIIPTLVVGPFITTSMPPS--LITALSPITRNEAHYSIIRQGQYVHLDDLCNA 237

Query: 238 QVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
            + L+E  AA GRY+C++        ++ +   +PE+ V
Sbjct: 238 HIFLYEQAAAKGRYICSSHDATILTISKFLRPKYPEYNV 276

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P14720|DFRA_PETHY Dihydroflavonol-4-reductase OS=Petunia hybrida GN=DFRA PE=2 SV=2

 Score =  170 bits (430), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/278 (39%), Positives = 159/278 (57%), Gaps = 20/278 (7%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS---HLFALPGAGDANLRVFEAD 67
           TVCVTGA GFIG+WLV  LL+  Y +++ATV    +     HL  LP A D NL +++AD
Sbjct: 17  TVCVTGAAGFIGSWLVMRLLERGY-NVHATVRDPENKKKVKHLLELPKA-DTNLTLWKAD 74

Query: 68  VLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA-AKRFGVRRV 126
           +   G+   A++GC+GVFHVA+P   E   DPE E+I P V+G L+++E+ AK   V+R+
Sbjct: 75  LTVEGSFDEAIQGCQGVFHVATPMDFESK-DPENEVIKPTVRGMLSIIESCAKANTVKRL 133

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLE--YCKSRKKW-YPVSKTLAEKAAWEFAEKHG 183
           V TSS   +      K   +D+TSW+DL+  Y K    W Y  SK LAEKAA E A+K  
Sbjct: 134 VFTSSAGTLDVQEQQK-LFYDQTSWSDLDFIYAKKMTGWMYFASKILAEKAAMEEAKKKN 192

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL-----GAVPVKDVAKAQ 238
           +D ++I P   +GP + P    S      L+ G+    E H+        V + D+ +A 
Sbjct: 193 IDFISIIPPLVVGPFITPTFPPSLITALSLITGN----EAHYCIIKQGQYVHLDDLCEAH 248

Query: 239 VLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
           + L+E P A GR++C++      D A+ V + +PE+ V
Sbjct: 249 IFLYEHPKADGRFICSSHHAIIYDVAKMVREKWPEYYV 286

Petunia hybrida (taxid: 4102)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51104|DFRA_DIACA Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1

 Score =  169 bits (429), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/276 (36%), Positives = 162/276 (58%), Gaps = 15/276 (5%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---SHLFALPGAGDANLRVFEA 66
           ETVCVTGA+GFIG+WL+  LL+  YT + ATV    ++    HL  LP A   NL +++A
Sbjct: 23  ETVCVTGASGFIGSWLIMRLLERGYT-VRATVRDPDNTKKVQHLLDLPNA-KTNLTLWKA 80

Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
           D+ + G+   AV+GC GVFH+A+P   E   DPE E+I P + G L++L++  +  +RRV
Sbjct: 81  DLHEEGSFDAAVDGCTGVFHIATPMDFESK-DPENEMIKPTINGMLDILKSCVKAKLRRV 139

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK--W-YPVSKTLAEKAAWEFAEKHG 183
           V TSS    V     +  V+DET W+ L++ +S K   W Y VSK LAE+AAW++A ++ 
Sbjct: 140 VFTSS-GGTVNVEATQKPVYDETCWSALDFIRSVKMTGWMYFVSKILAEQAAWKYAAENN 198

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA---VPVKDVAKAQVL 240
           ++ ++I P   +GP + P +  S  ++  L   ++    Y  +     V + D+  + + 
Sbjct: 199 LEFISIIPPLVVGPFIMPSMPPS--LITALSPITRTESHYTIIKQGQFVHLDDLCMSHIF 256

Query: 241 LFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
           L+E+P A+GRY+ +       D A+ + + +PE+ V
Sbjct: 257 LYENPKANGRYIASACAATIYDIAKMLREEYPEYNV 292

Dianthus caryophyllus (taxid: 3570)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51106|DFRA_HORVU Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1

 Score =  167 bits (422), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/281 (37%), Positives = 159/281 (56%), Gaps = 28/281 (9%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEADV 68
           V VTGA+GF+G+WLV  LL   YT + ATV   ++   +  L  LPGA +  L +++AD+
Sbjct: 8   VVVTGASGFVGSWLVMKLLQAGYT-VRATVRDPANVEKTKPLLELPGAKE-RLSIWKADL 65

Query: 69  LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVV 127
            + G+ + A+ GC GVFHVA+P    D  DPE E+I P V+G L+++ A K  G V+R+V
Sbjct: 66  SEDGSFNEAIAGCTGVFHVATPMDF-DSQDPENEVIKPTVEGMLSIMRACKEAGTVKRIV 124

Query: 128 VTSSISAI----VPNPGWKGKVFDETSWTDLEYCKSRKK--W-YPVSKTLAEKAAWEFAE 180
            TSS  ++     P P      +D+ +W+D++YC+  K   W Y VSK LAEKAA E+A 
Sbjct: 125 FTSSAGSVNIEERPRP-----AYDQDNWSDIDYCRRVKMTGWMYFVSKALAEKAAMEYAS 179

Query: 181 KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW-----LGAVPVKDVA 235
           ++G+D ++I P   +GP +   +  S      L+ G+    E H+     +  V + D+ 
Sbjct: 180 ENGLDFISIIPTLVVGPFLSAGMPPSLVTALALITGN----EAHYSILKQVQLVHLDDLC 235

Query: 236 KAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
            A   LFE P A+GRY+C++        A  +   FPE+ +
Sbjct: 236 DAMTFLFEHPEANGRYICSSHDATIHGLARMLQDRFPEYDI 276

Hordeum vulgare (taxid: 4513)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	307
225465312	333	PREDICTED: bifunctional dihydroflavonol	0.912	0.840	0.779	1e-130
224129534	330	predicted protein [Populus trichocarpa]	0.889	0.827	0.793	1e-129
255556687	334	cinnamoyl-CoA reductase, putative [Ricin	0.905	0.832	0.761	1e-126
449478087	326	PREDICTED: tetraketide alpha-pyrone redu	0.899	0.846	0.760	1e-123
449431910	326	PREDICTED: tetraketide alpha-pyrone redu	0.899	0.846	0.757	1e-123
15226955	318	Rossmann-fold NAD(P)-binding domain-cont	0.879	0.849	0.716	1e-118
297817868	318	cinnamoyl-CoA reductase family [Arabidop	0.879	0.849	0.713	1e-117
147765772	293	hypothetical protein VITISV_004153 [Viti	0.785	0.822	0.678	1e-107
357448325	333	Dihydroflavonol-4-reductase [Medicago tr	0.895	0.825	0.666	1e-105
356555831	330	PREDICTED: bifunctional dihydroflavonol	0.895	0.833	0.677	1e-102

>gi|225465312|ref|XP_002269382.1| PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase [Vitis vinifera] gi|297739432|emb|CBI29614.3| unnamed protein product [Vitis vinifera]

 Score =  470 bits (1209), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 219/281 (77%), Positives = 258/281 (91%), Gaps = 1/281 (0%)

Query: 4   EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRV 63
           EA+K++E VCVTGANGFIG+WLV+TL+++ YT+I+A++FPGSD+SHLF+LPGA  A++ V
Sbjct: 5   EADKKKEAVCVTGANGFIGSWLVRTLVEHGYTTIHASIFPGSDASHLFSLPGAAAADIVV 64

Query: 64  FEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
           +EAD+LD+ AV+RAVEGC GVFHVASPC+LEDP DPEKEL++PAV+GT NVLEAA+RF V
Sbjct: 65  YEADLLDAEAVARAVEGCTGVFHVASPCSLEDPKDPEKELLMPAVEGTKNVLEAARRFQV 124

Query: 124 RRVVVTSSISAIVPNPGWKGKV-FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH 182
           RRVV+TSSISA+VPNP W   + F+ETSWTDL YCKSR+KWYPVSKTLAEKAAWEFA KH
Sbjct: 125 RRVVLTSSISALVPNPSWPPNIPFNETSWTDLHYCKSRQKWYPVSKTLAEKAAWEFAGKH 184

Query: 183 GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLF 242
           G+DVVAIHPATCLG L+QP LNASCAVLQQLL+GS +TQEYHWLGAV VKDVAKAQVLLF
Sbjct: 185 GIDVVAIHPATCLGELLQPRLNASCAVLQQLLEGSTETQEYHWLGAVHVKDVAKAQVLLF 244

Query: 243 ESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFVFQS 283
           E+PAASGRYLCT+GIYQF DFAERVSKLFPEFPVHRF+ ++
Sbjct: 245 ETPAASGRYLCTDGIYQFADFAERVSKLFPEFPVHRFIGET 285

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129534|ref|XP_002328740.1| predicted protein [Populus trichocarpa] gi|222839038|gb|EEE77389.1| predicted protein [Populus trichocarpa]

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 219/276 (79%), Positives = 252/276 (91%), Gaps = 3/276 (1%)

Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDAN--LRVF 64
           K++E VCVTGANGFIG+WLV+TLLD  YT I+A+++PGSD SHLF +PGA DA+  L VF
Sbjct: 3   KQKEAVCVTGANGFIGSWLVRTLLDQGYTKIHASIYPGSDPSHLFEIPGATDASVSLEVF 62

Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           EADVLD  A+ +AVEGC+GVFHVASPCTLEDP DP++EL++PAVQGTLNVLEAAK+F VR
Sbjct: 63  EADVLDHDAICKAVEGCQGVFHVASPCTLEDPKDPQEELVMPAVQGTLNVLEAAKKFKVR 122

Query: 125 RVVVTSSISAIVPNPGW-KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
           RVVVTSSISA+VPNP W + KVFDE+SWTDL+YCKSR+KWYPVSKTLAEKAAWEFA ++G
Sbjct: 123 RVVVTSSISALVPNPSWPREKVFDESSWTDLDYCKSRQKWYPVSKTLAEKAAWEFAGRNG 182

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE 243
           +DVVAIHPATCLGPL+QP LNASCAVLQQLLQGS+DTQEYHWLGAV V+DVA+AQVLLFE
Sbjct: 183 MDVVAIHPATCLGPLLQPALNASCAVLQQLLQGSRDTQEYHWLGAVHVRDVARAQVLLFE 242

Query: 244 SPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRF 279
           +P ASGRYLCTNGIYQFGDFA  VS+LFPEFP+HRF
Sbjct: 243 TPTASGRYLCTNGIYQFGDFAATVSRLFPEFPLHRF 278

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255556687|ref|XP_002519377.1| cinnamoyl-CoA reductase, putative [Ricinus communis] gi|223541444|gb|EEF42994.1| cinnamoyl-CoA reductase, putative [Ricinus communis]

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 217/285 (76%), Positives = 257/285 (90%), Gaps = 7/285 (2%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA---G 57
           MA++ +KE   VCVTGANGFIG+WL++TLL + YT+I+A+++P SD SHLF L  +   G
Sbjct: 1   MATQNKKE--AVCVTGANGFIGSWLIQTLLQHGYTTIHASIYPASDPSHLFHLISSSSHG 58

Query: 58  DA-NLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLE 116
           D  NL+++EAD+LD  A+ +AVEGC+GVFHVASPCTLE+P DPEKEL+LPAVQGT+NVLE
Sbjct: 59  DIINLKLYEADLLDYDAICKAVEGCQGVFHVASPCTLEEPKDPEKELVLPAVQGTINVLE 118

Query: 117 AAKRFGVRRVVVTSSISAIVPNPGW-KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAA 175
           AA++F VRRVV+TSSISA+VPNP W  GKVFDE+SWTDL+YCKSR+KWYPVSK+LAEKAA
Sbjct: 119 AARKFKVRRVVLTSSISALVPNPNWPAGKVFDESSWTDLDYCKSRQKWYPVSKSLAEKAA 178

Query: 176 WEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVA 235
           WEFAEKHG+DVVAIHP+TC+GPL+QP LNAS AVLQQLL+GSKDTQEYHWLGAV VKDVA
Sbjct: 179 WEFAEKHGMDVVAIHPSTCIGPLLQPSLNASSAVLQQLLEGSKDTQEYHWLGAVHVKDVA 238

Query: 236 KAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFV 280
           KAQVLLFE+P+ASGRYLCTNGIYQFGDFA+RVSKLFPEFPVH F+
Sbjct: 239 KAQVLLFEAPSASGRYLCTNGIYQFGDFADRVSKLFPEFPVHSFI 283

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449478087|ref|XP_004155219.1| PREDICTED: tetraketide alpha-pyrone reductase 1-like [Cucumis sativus]

 Score =  447 bits (1149), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 213/280 (76%), Positives = 250/280 (89%), Gaps = 4/280 (1%)

Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-PGAG-DANLRVF 64
           KE+E VCVTGANGFIG+W+V+ LL++ YT+I+ ++FPGSDSSHL  L P    +ANLRVF
Sbjct: 5   KEKEPVCVTGANGFIGSWVVRALLESGYTTIHTSIFPGSDSSHLLNLLPSTNPNANLRVF 64

Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           EAD++D  AV+RAVEGCKGVFH+ASPCTLEDPVDP+KEL+ PAVQGT+NVL AAK+FGVR
Sbjct: 65  EADLMDGEAVARAVEGCKGVFHIASPCTLEDPVDPQKELVEPAVQGTVNVLNAAKKFGVR 124

Query: 125 RVVVTSSISAIVPNPGWKGKV-FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
           RVV+TSSISA+VPNPGW   + FDE+SWTDLEYC SRKKWYPVSKTLAEK+AWEFAE HG
Sbjct: 125 RVVLTSSISALVPNPGWPSHMPFDESSWTDLEYCISRKKWYPVSKTLAEKSAWEFAENHG 184

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE 243
           +DVV+I PATCLGPL+QP LNASCAVLQQLL GS+DTQEYHWLGAV VKDVAKAQ+LLFE
Sbjct: 185 LDVVSILPATCLGPLLQPTLNASCAVLQQLLHGSQDTQEYHWLGAVHVKDVAKAQILLFE 244

Query: 244 SPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFVFQS 283
           SP  SGRYLCTNGIYQF +FA++V+K+ P+FPVHRFV ++
Sbjct: 245 SP-TSGRYLCTNGIYQFSEFADKVAKICPQFPVHRFVGET 283

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449431910|ref|XP_004133743.1| PREDICTED: tetraketide alpha-pyrone reductase 1-like [Cucumis sativus]

 Score =  446 bits (1148), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 212/280 (75%), Positives = 250/280 (89%), Gaps = 4/280 (1%)

Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-PGAG-DANLRVF 64
           KE+E VCVTGANGFIG+W+V+ LL++ YT+I+ ++FPGSDSSHL  L P    +ANLR+F
Sbjct: 5   KEKEPVCVTGANGFIGSWVVRALLESGYTTIHTSIFPGSDSSHLLNLLPSTNPNANLRIF 64

Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           EAD++D  AV+RAVEGCKGVFH+ASPCTLEDPVDP+KEL+ PAVQGT+NVL AAK+FGVR
Sbjct: 65  EADLMDGEAVARAVEGCKGVFHIASPCTLEDPVDPQKELVEPAVQGTVNVLNAAKKFGVR 124

Query: 125 RVVVTSSISAIVPNPGWKGKV-FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
           RVV+TSSISA+VPNPGW   + FDE+SWTDLEYC SRKKWYPVSKTLAEK+AWEFAE HG
Sbjct: 125 RVVLTSSISALVPNPGWPSHMPFDESSWTDLEYCISRKKWYPVSKTLAEKSAWEFAENHG 184

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE 243
           +DVV+I PATCLGPL+QP LNASCAVLQQLL GS+DTQEYHWLGAV VKDVAKAQ+LLFE
Sbjct: 185 LDVVSILPATCLGPLLQPTLNASCAVLQQLLHGSQDTQEYHWLGAVHVKDVAKAQILLFE 244

Query: 244 SPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFVFQS 283
           SP  SGRYLCTNGIYQF +FA++V+K+ P+FPVHRFV ++
Sbjct: 245 SP-TSGRYLCTNGIYQFSEFADKVAKICPQFPVHRFVGET 283

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15226955|ref|NP_178345.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|3894172|gb|AAC78522.1| putative cinnamoyl-CoA reductase [Arabidopsis thaliana] gi|28973736|gb|AAO64184.1| putative cinnamoyl-CoA reductase [Arabidopsis thaliana] gi|29824207|gb|AAP04064.1| putative cinnamoyl-CoA reductase [Arabidopsis thaliana] gi|110736834|dbj|BAF00375.1| putative cinnamoyl-CoA reductase [Arabidopsis thaliana] gi|330250482|gb|AEC05576.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 195/272 (71%), Positives = 240/272 (88%), Gaps = 2/272 (0%)

Query: 9   EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV 68
           +ETVCVTGANGFIG+W+++TL++  YT I+A+++PGSD +HL  LPG+ D+ +++FEAD+
Sbjct: 3   KETVCVTGANGFIGSWIIRTLIEKGYTKIHASIYPGSDPTHLLQLPGS-DSKIKIFEADL 61

Query: 69  LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
           LDS A+SRA++GC GVFHVASPCTL+ PVDPEKEL+ PAV+GT+NVLEAAKRF VRRVV+
Sbjct: 62  LDSDAISRAIDGCAGVFHVASPCTLDPPVDPEKELVEPAVKGTINVLEAAKRFNVRRVVI 121

Query: 129 TSSISAIVPNPGWKGKV-FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVV 187
           TSSISA+VPNP W  KV  DE+SW+DL++CKSR+KWYP+SKTLAEKAAWEF+EKHG ++V
Sbjct: 122 TSSISALVPNPNWPEKVPVDESSWSDLDFCKSRQKWYPISKTLAEKAAWEFSEKHGTNIV 181

Query: 188 AIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAA 247
            IHP+TCLGPL+QP LNASCAVL QLLQGS +TQE+HWLG V VKDVAK  V+LFE+P A
Sbjct: 182 TIHPSTCLGPLLQPNLNASCAVLLQLLQGSTETQEHHWLGVVHVKDVAKGHVMLFETPDA 241

Query: 248 SGRYLCTNGIYQFGDFAERVSKLFPEFPVHRF 279
           SGR+LCTNGIYQF +FA  VSKLFPEF VH+F
Sbjct: 242 SGRFLCTNGIYQFSEFAALVSKLFPEFAVHKF 273

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297817868|ref|XP_002876817.1| cinnamoyl-CoA reductase family [Arabidopsis lyrata subsp. lyrata] gi|297322655|gb|EFH53076.1| cinnamoyl-CoA reductase family [Arabidopsis lyrata subsp. lyrata]

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 194/272 (71%), Positives = 239/272 (87%), Gaps = 2/272 (0%)

Query: 9   EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV 68
           +ETVCVTGANGFIG+W+++TL++  YT I+A+V+PGSD +HL  LPG+ D+ +++FEAD+
Sbjct: 3   KETVCVTGANGFIGSWIIRTLIEKGYTKIHASVYPGSDPTHLLKLPGS-DSKIKIFEADL 61

Query: 69  LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
           LDS A+SRA++GC GVFHVASPCTL+ PV+PEKEL+ PAV+GT+NVLEAAKRF VRRVV+
Sbjct: 62  LDSDAISRAIDGCAGVFHVASPCTLDPPVNPEKELVEPAVKGTINVLEAAKRFNVRRVVI 121

Query: 129 TSSISAIVPNPGWKGKV-FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVV 187
           TSSISA+VPNP W  +V  DE+SWTDL++CKS +KWYP+SKTLAEKAAWEF+EKHG ++V
Sbjct: 122 TSSISALVPNPNWPERVPVDESSWTDLDFCKSMQKWYPISKTLAEKAAWEFSEKHGTNIV 181

Query: 188 AIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAA 247
            IHP+TCLGPL+QP LNASCAVL QLLQGS +TQE+HWLG V V+DVAK  V+LFE+P A
Sbjct: 182 TIHPSTCLGPLLQPNLNASCAVLLQLLQGSTETQEHHWLGVVHVRDVAKGHVMLFETPEA 241

Query: 248 SGRYLCTNGIYQFGDFAERVSKLFPEFPVHRF 279
           SGR+LCTNGIYQF +FA  VSKLFPEF VHRF
Sbjct: 242 SGRFLCTNGIYQFSEFAALVSKLFPEFAVHRF 273

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147765772|emb|CAN68983.1| hypothetical protein VITISV_004153 [Vitis vinifera]

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 190/280 (67%), Positives = 225/280 (80%), Gaps = 39/280 (13%)

Query: 4   EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRV 63
           EA+K++E VCVTGANGFIG+WLV+TL+++ YT+I+A++FPGSD+SHLF+LPGA  A++ V
Sbjct: 5   EADKKKEAVCVTGANGFIGSWLVRTLVEHGYTTIHASIFPGSDASHLFSLPGAAAADIVV 64

Query: 64  FEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
           +EAD+LD+ AV+RAVEGC GVFHVASPC+LEDP DPEKEL++PAV+GT NVLEAA+RF  
Sbjct: 65  YEADLLDAEAVARAVEGCTGVFHVASPCSLEDPKDPEKELLMPAVEGTKNVLEAARRF-- 122

Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
                                                +KWYPVSKTLAEKAAWEFA KHG
Sbjct: 123 -------------------------------------QKWYPVSKTLAEKAAWEFAGKHG 145

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE 243
           +DVVAIHPATCLG L+QP LNASCAVLQQLL+GS +TQEYHWLGAV VKDVAKAQVLLFE
Sbjct: 146 IDVVAIHPATCLGELLQPRLNASCAVLQQLLEGSTETQEYHWLGAVHVKDVAKAQVLLFE 205

Query: 244 SPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFVFQS 283
           +PAASGRYLCT+GIYQF DFAERVSKLFPEFPVHRF+ ++
Sbjct: 206 TPAASGRYLCTDGIYQFADFAERVSKLFPEFPVHRFIGET 245

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357448325|ref|XP_003594438.1| Dihydroflavonol-4-reductase [Medicago truncatula] gi|355483486|gb|AES64689.1| Dihydroflavonol-4-reductase [Medicago truncatula]

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 186/279 (66%), Positives = 222/279 (79%), Gaps = 4/279 (1%)

Query: 5   AEKEEETVCVTGANGFIGTWLVKTLL--DNNYTSINATVFPGSDSSHLFALPGAGDANLR 62
           +E  EE VCVTGANGFIG+WLV TLL   N +  I+AT+FP SD SHLF L     + + 
Sbjct: 3   SENREEVVCVTGANGFIGSWLVHTLLSKQNPHYKIHATIFPNSDPSHLFTLHPEAQSRIT 62

Query: 63  VFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG 122
           +F  ++LDS AVS A+ GC GVFHVASPCTLEDP DP+KEL+ PAVQGTLNVLEA+KR G
Sbjct: 63  IFPVNILDSTAVSNAINGCSGVFHVASPCTLEDPTDPQKELLEPAVQGTLNVLEASKRAG 122

Query: 123 VRRVVVTSSISAIVPNPGW-KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK 181
           V+RVV+TSSISA+VPNP W + K  DE SWTD+EYCK R KWYPVSKT AEK AWEF EK
Sbjct: 123 VKRVVLTSSISAMVPNPNWPENKAIDEGSWTDVEYCKLRGKWYPVSKTEAEKVAWEFCEK 182

Query: 182 H-GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVL 240
           H GVDVVA+HP TCLGPL+Q  +NAS AVLQ+L+ G KDTQE +WLGAV VKDVA+A VL
Sbjct: 183 HSGVDVVAVHPGTCLGPLLQNQMNASSAVLQRLMMGEKDTQECYWLGAVHVKDVARAHVL 242

Query: 241 LFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRF 279
           ++E+P A+GRYLC NGIYQF  FA+ VS+L+ ++P+H F
Sbjct: 243 VYETPTAAGRYLCVNGIYQFSSFAKIVSELYHDYPIHSF 281

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555831|ref|XP_003546233.1| PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase-like [Glycine max]

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 191/282 (67%), Positives = 232/282 (82%), Gaps = 7/282 (2%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLD--NNYTSINATVFPGSDSSHLFALPGAGD 58
           MA+E    +E VCVTGANGFIG+WLV+TLL+  N   +I+AT+FPGSD+SHLF L  +  
Sbjct: 1   MANEI-PHDEVVCVTGANGFIGSWLVRTLLEKENPRYTIHATIFPGSDASHLFNLHPSAA 59

Query: 59  ANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAA 118
           + L +F AD+LD+ A+SRA+  C GVFHVASPCTLEDP DP+++L+ PAVQGTLNVL AA
Sbjct: 60  SRLTLFPADLLDAAALSRAITACSGVFHVASPCTLEDPTDPQRDLLEPAVQGTLNVLTAA 119

Query: 119 KRFGVRRVVVTSSISAIVPNPGW-KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWE 177
           +R GVRRVV+TSSISA+VPNPGW  G+  DE SWTD+EYCK R KWYPV+KT AE+AAW 
Sbjct: 120 RRVGVRRVVLTSSISAMVPNPGWPAGRAADEASWTDVEYCKGRGKWYPVAKTEAERAAWA 179

Query: 178 FAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKA 237
           F    GV+VVA+ PATCLGPL+QP LNAS AVL++L+ GS++TQEYHWLGAV VKDVAKA
Sbjct: 180 F---DGVEVVAVLPATCLGPLLQPDLNASSAVLRELMMGSRETQEYHWLGAVHVKDVAKA 236

Query: 238 QVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRF 279
            VLL+E+P A+GRYLCTNGIYQF  FA  VS+L+PEFP+HRF
Sbjct: 237 NVLLYETPTAAGRYLCTNGIYQFSSFAAMVSELYPEFPIHRF 278

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	307
TAIR|locus:2056171	318	AT2G02400 [Arabidopsis thalian	0.879	0.849	0.716	5.3e-111
TAIR|locus:2171258	324	AT5G58490 [Arabidopsis thalian	0.869	0.824	0.509	4.9e-69
TAIR|locus:2150315	326	AT5G19440 [Arabidopsis thalian	0.889	0.837	0.450	5.3e-56
TAIR|locus:2033904	325	AT1G51410 [Arabidopsis thalian	0.866	0.818	0.438	1.8e-55
TAIR|locus:2051018	321	CRL2 "CCR(Cinnamoyl coA:NADP o	0.830	0.794	0.456	4.8e-55
TAIR|locus:2051008	321	CRL1 "CCR(Cinnamoyl coA:NADP o	0.863	0.825	0.436	3.8e-53
TAIR|locus:2200427	344	CCR1 "cinnamoyl coa reductase	0.866	0.773	0.448	6.3e-53
TAIR|locus:2122093	326	DRL1 "dihydroflavonol 4-reduct	0.859	0.809	0.394	3.5e-52
TAIR|locus:2033394	319	AT1G66800 [Arabidopsis thalian	0.843	0.811	0.431	7.2e-52
TAIR|locus:2012280	325	AT1G09500 [Arabidopsis thalian	0.846	0.8	0.424	1.9e-51

TAIR|locus:2056171 AT2G02400 [Arabidopsis thaliana (taxid:3702)]

 Score = 1096 (390.9 bits), Expect = 5.3e-111, P = 5.3e-111
 Identities = 195/272 (71%), Positives = 240/272 (88%)

Query:     9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV 68
             +ETVCVTGANGFIG+W+++TL++  YT I+A+++PGSD +HL  LPG+ D+ +++FEAD+
Sbjct:     3 KETVCVTGANGFIGSWIIRTLIEKGYTKIHASIYPGSDPTHLLQLPGS-DSKIKIFEADL 61

Query:    69 LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
             LDS A+SRA++GC GVFHVASPCTL+ PVDPEKEL+ PAV+GT+NVLEAAKRF VRRVV+
Sbjct:    62 LDSDAISRAIDGCAGVFHVASPCTLDPPVDPEKELVEPAVKGTINVLEAAKRFNVRRVVI 121

Query:   129 TSSISAIVPNPGWKGKV-FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVV 187
             TSSISA+VPNP W  KV  DE+SW+DL++CKSR+KWYP+SKTLAEKAAWEF+EKHG ++V
Sbjct:   122 TSSISALVPNPNWPEKVPVDESSWSDLDFCKSRQKWYPISKTLAEKAAWEFSEKHGTNIV 181

Query:   188 AIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAA 247
              IHP+TCLGPL+QP LNASCAVL QLLQGS +TQE+HWLG V VKDVAK  V+LFE+P A
Sbjct:   182 TIHPSTCLGPLLQPNLNASCAVLLQLLQGSTETQEHHWLGVVHVKDVAKGHVMLFETPDA 241

Query:   248 SGRYLCTNGIYQFGDFAERVSKLFPEFPVHRF 279
             SGR+LCTNGIYQF +FA  VSKLFPEF VH+F
Sbjct:   242 SGRFLCTNGIYQFSEFAALVSKLFPEFAVHKF 273

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

TAIR|locus:2171258 AT5G58490 [Arabidopsis thaliana (taxid:3702)]

 Score = 700 (251.5 bits), Expect = 4.9e-69, P = 4.9e-69
 Identities = 139/273 (50%), Positives = 187/273 (68%)

Query:     8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVF 64
             E E VCVTGA+G IG+WLV  LL   Y S++ATV    D   + HL  L GA    L +F
Sbjct:     5 EREVVCVTGASGCIGSWLVHQLLLRGY-SVHATVKNLQDEKETKHLEGLEGAA-TRLHLF 62

Query:    65 EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
             E D+L    VS A+ GC GVFH+ASPC +++  DP+K+L+ PAV+GT+NVL AAK   V+
Sbjct:    63 EMDLLQYDTVSAAINGCSGVFHLASPCIVDEVQDPQKQLLDPAVKGTINVLTAAKEASVK 122

Query:   125 RVVVTSSISAIVPNPGWKG-KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
             RVVVTSSISAI P+P W   K+ +E  W   +YC+    WYP+SKTLAEKAAWEFAE+ G
Sbjct:   123 RVVVTSSISAITPSPNWPADKIKNEECWAAEDYCRQNGLWYPLSKTLAEKAAWEFAEEKG 182

Query:   184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE 243
             +DVV ++P T +GP++ P LNAS  +L +LLQG  +T E  ++G+V  KDVA A +L++E
Sbjct:   183 LDVVVVNPGTVMGPVIPPSLNASMHMLLRLLQGCTETYENFFMGSVHFKDVALAHILVYE 242

Query:   244 SPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
              P + GR+LC   I  +GDF  +V++L+P + V
Sbjct:   243 DPYSKGRHLCVEAISHYGDFVAKVAELYPNYNV 275

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2150315 AT5G19440 [Arabidopsis thaliana (taxid:3702)]

 Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
 Identities = 128/284 (45%), Positives = 179/284 (63%)

Query:     8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVF 64
             E + VCVTGA+G+I +WLVK LL   YT + A+V   SD   + HL +L GA +  L +F
Sbjct:     6 EGKVVCVTGASGYIASWLVKFLLSRGYT-VKASVRDPSDPKKTQHLVSLEGAKE-RLHLF 63

Query:    65 EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA-AKRFGV 123
             +AD+L+ G+   A++GC GVFH ASP    D  DP+ ELI PAV+GTLNVL + AK   V
Sbjct:    64 KADLLEQGSFDSAIDGCHGVFHTASPF-FNDAKDPQAELIDPAVKGTLNVLNSCAKASSV 122

Query:   124 RRVVVTSSISAIVPN--PGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK 181
             +RVVVTSS++A+  N  P       DET ++D E C++ K WY +SKTLAE AAW+ A++
Sbjct:   123 KRVVVTSSMAAVGYNGKPRTPDVTVDETWFSDPELCEASKMWYVLSKTLAEDAAWKLAKE 182

Query:   182 HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLL 241
              G+D+V I+PA  +GPL+QP LN S A +  L+ G+K      + G V VKDVA A +  
Sbjct:   183 KGLDIVTINPAMVIGPLLQPTLNTSAAAILNLINGAKTFPNLSF-GWVNVKDVANAHIQA 241

Query:   242 FESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV-HRFVFQSP 284
             FE P+A+GRY     +    +    + +L+P  P+  R V ++P
Sbjct:   242 FEVPSANGRYCLVERVVHHSEIVNILRELYPNLPLPERCVDENP 285

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2033904 AT1G51410 [Arabidopsis thaliana (taxid:3702)]

 Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
 Identities = 121/276 (43%), Positives = 181/276 (65%)

Query:     5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANL 61
             + +EE+TVCVTGA+G+I +W+VK LL   YT + A+V   +D   + HL AL GA +  L
Sbjct:     2 SSEEEKTVCVTGASGYIASWIVKLLLLRGYT-VKASVRDPNDPRKTEHLLALEGA-EERL 59

Query:    62 RVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAA-KR 120
             ++F+A++L+ G+   A++GC+GVFH ASP    D  DP+ EL+ PAV+GT+NVL +  K 
Sbjct:    60 KLFKANLLEEGSFDSAIDGCEGVFHTASPF-YHDVKDPQAELLDPAVKGTINVLSSCLKT 118

Query:   121 FGVRRVVVTSSISAIVPN--PGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEF 178
               V+RVV+TSSI+A+  N  P     + DET + D +YC++ K WY +SKTLAE AAW+F
Sbjct:   119 SSVKRVVLTSSIAAVAFNGMPRTPETIVDETWFADPDYCRASKLWYVLSKTLAENAAWKF 178

Query:   179 AEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQ 238
             A+++ + +V+I+PA  +GPL+QP LN S A +  L++G++ T      G V VKDVA A 
Sbjct:   179 AKENNLQLVSINPAMVIGPLLQPTLNTSAAAVLSLIKGAQ-TFPNATFGWVNVKDVANAH 237

Query:   239 VLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEF 274
             +  FE+P A GRY     +  + +    +  L+P+F
Sbjct:   238 IQAFENPDADGRYCLVERVAHYSEVVNILHDLYPDF 273

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

GO:0048610 "cellular process involved in reproduction" evidence=RCA

GO:0048868 "pollen tube development" evidence=RCA

TAIR|locus:2051018 CRL2 "CCR(Cinnamoyl coA:NADP oxidoreductase)-like 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
 Identities = 122/267 (45%), Positives = 177/267 (66%)

Query:    12 VCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDS-SHLFALPGAGDANLRVFEADVL 69
             VCVTGA GF+G+W+V  LL  +Y  ++ TV  PG++  +HL  L  AGD  L++F+AD+L
Sbjct:     9 VCVTGAGGFLGSWVVNHLLSRDYF-VHGTVRDPGNEKYAHLKKLDKAGD-KLKLFKADLL 66

Query:    70 DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
             + G++  A+ GC GVFHVA P       +PE +LI PAV GTLNVL+A     V+RVV  
Sbjct:    67 NYGSLQSAIAGCSGVFHVACPVPSASVPNPEVDLIAPAVDGTLNVLKACVEAKVKRVVYV 126

Query:   130 SSISAIVPNPGW-KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVA 188
             SS+SA+  NP W K +V DET+W+D +YCK  + WY +SKT AE  A+EFA++ G+D+V+
Sbjct:   127 SSVSAVAMNPMWSKSQVLDETAWSDQDYCKKTENWYSLSKTRAESEAFEFAKRTGLDLVS 186

Query:   189 IHPATCLGPLMQPY-LNASCAVLQQLL-QG--SKDTQEYHWLGAVPVKDVAKAQVLLFES 244
             + P   LGP++Q + +NAS  VL +LL +G  S++ QE H    V V+DVA+A +L++E 
Sbjct:   187 VCPTLVLGPVLQQHTVNASSLVLLKLLKEGYESRNNQERH---LVDVRDVAQALLLVYEK 243

Query:   245 PAASGRYLCTNGIYQFGDFAERVSKLF 271
               A GRY+C     +  + AE++  L+
Sbjct:   244 AEAEGRYICIGHTVREQEVAEKLKSLY 270

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

TAIR|locus:2051008 CRL1 "CCR(Cinnamoyl coA:NADP oxidoreductase)-like 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
 Identities = 121/277 (43%), Positives = 175/277 (63%)

Query:     5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDS-SHLFALPGAGDANLR 62
             A+  +  VCVTGA GF+G+W+V  LL  +Y  ++ TV  P ++  +HL  L  AGD  L+
Sbjct:     2 ADVHKGKVCVTGAGGFLGSWVVDLLLSKDYF-VHGTVRDPDNEKYAHLKKLEKAGD-KLK 59

Query:    63 VFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG 122
             +F+AD+LD G++  A+ GC GVFHVA P       +PE ELI PAV GTLNVL+A     
Sbjct:    60 LFKADLLDYGSLQSAIAGCSGVFHVACPVPPASVPNPEVELIAPAVDGTLNVLKACIEAN 119

Query:   123 VRRVVVTSSISAIVPNPGW-KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK 181
             V+RVV  SS++A   NP W K +V DE  W+D EYCK  + WY ++KT AE  A+EFA++
Sbjct:   120 VKRVVYVSSVAAAFMNPMWSKNQVLDEACWSDQEYCKKTENWYCLAKTRAESEAFEFAKR 179

Query:   182 HGVDVVAIHPATCLGPLMQPY-LNASCAVLQQLL-QG--SKDTQEYHWLGAVPVKDVAKA 237
              G+ +V++ P   LGP++Q   +NAS  VL +LL +G  ++D QE H    V V+DVA+A
Sbjct:   180 TGLHLVSVCPTLVLGPILQQNTVNASSLVLLKLLKEGFETRDNQERH---LVDVRDVAQA 236

Query:   238 QVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEF 274
              +L++E   A GRY+CT+   +     E++   +P +
Sbjct:   237 LLLVYEKAEAEGRYICTSHTVKEEIVVEKLKSFYPHY 273

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009408 "response to heat" evidence=IEP

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0046686 "response to cadmium ion" evidence=IEP

TAIR|locus:2200427 CCR1 "cinnamoyl coa reductase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
 Identities = 125/279 (44%), Positives = 174/279 (62%)

Query:     1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGD 58
             +AS A K   TVCVTGA G+I +W+VK LL+  YT +  TV    D  ++HL  L G G 
Sbjct:     5 VASPAGK---TVCVTGAGGYIASWIVKILLERGYT-VKGTVRNPDDPKNTHLRELEG-GK 59

Query:    59 ANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAA 118
               L + +AD+ D  A+  A++GC GVFH ASP T  D  DPE +++ PAV G   V+ AA
Sbjct:    60 ERLILCKADLQDYEALKAAIDGCDGVFHTASPVT--D--DPE-QMVEPAVNGAKFVINAA 114

Query:   119 KRFGVRRVVVTSSISAIVPNPGWKGK-VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWE 177
                 V+RVV+TSSI A+  +P    + V DE+ W+DL++CK+ K WY   K +AE+AAWE
Sbjct:   115 AEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWE 174

Query:   178 FAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKA 237
              A++ GVD+V ++P   LGP +QP +NAS   + + L GS  T        V V+DVA A
Sbjct:   175 TAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALA 234

Query:   238 QVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
              VL++E+P+ASGRYL        G+  E ++KLFPE+P+
Sbjct:   235 HVLVYEAPSASGRYLLAESARHRGEVVEILAKLFPEYPL 273

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=IDA

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0009409 "response to cold" evidence=IEP

TAIR|locus:2122093 DRL1 "dihydroflavonol 4-reductase-like1" [Arabidopsis thaliana (taxid:3702)]

 Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
 Identities = 109/276 (39%), Positives = 179/276 (64%)

Query:    12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGAGDANLRVFEADVL 69
             VCVTGA+GF+ +WLVK LL   Y  I     PG++   +HL+ L GA +  LR+ +AD++
Sbjct:     8 VCVTGASGFLASWLVKRLLLEGYEVIGTVRDPGNEKKLAHLWKLEGAKE-RLRLVKADLM 66

Query:    70 DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVV 128
             + G+   A+ GC+GVFH ASP  L+   +PE+E++ PA++GTLNVL + ++   ++RVV+
Sbjct:    67 EEGSFDNAIMGCQGVFHTASP-VLKPTSNPEEEILRPAIEGTLNVLRSCRKNPSLKRVVL 125

Query:   129 TSSISAIVPNPGWKGKV-FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVV 187
             TSS S +     +  K+  DE+ WT +E CK  + WY +SKTLAE+AAW+F+E++G+D+V
Sbjct:   126 TSSSSTVRIRDDFDPKIPLDESIWTSVELCKRFQVWYALSKTLAEQAAWKFSEENGIDLV 185

Query:   188 AIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW---LGAVPVKDVAKAQVLLFES 244
              + P+  +GP + P L ++ + +  LL+G  +T+++ W   +G V + DVA+  +++FE 
Sbjct:   186 TVLPSFLVGPSLPPDLCSTASDVLGLLKG--ETEKFQWHGQMGYVHIDDVARTHIVVFEH 243

Query:   245 PAASGRYLCTNGIYQFGDFAERVSKLFPEFPV-HRF 279
              AA GRY+C++ +    +    +S  +P  P+  RF
Sbjct:   244 EAAQGRYICSSNVISLEELVSFLSARYPSLPIPKRF 279

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009555 "pollen development" evidence=IMP

GO:0048316 "seed development" evidence=IMP

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0010584 "pollen exine formation" evidence=IMP

GO:0080110 "sporopollenin biosynthetic process" evidence=IMP

TAIR|locus:2033394 AT1G66800 [Arabidopsis thaliana (taxid:3702)]

 Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
 Identities = 117/271 (43%), Positives = 172/271 (63%)

Query:     8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---SHLFALPGAGDANLRVF 64
             E + VCVTGA+G+I +W+VK LL   YT + ATV    D+   +HL  L GA +  L++F
Sbjct:     4 EGKVVCVTGASGYIASWIVKLLLLRGYT-VRATVRNPMDTKKTNHLLTLEGASE-RLKLF 61

Query:    65 EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA-AKRFGV 123
             ++D+L+ G+  +A+EGC GVFH ASP +L    DP+ E+I PAV GTLNVL   AK   V
Sbjct:    62 KSDLLEEGSFDQAIEGCDGVFHTASPVSLT-VTDPQTEMIDPAVNGTLNVLRTCAKVSSV 120

Query:   124 RRVVVTSSISAIVP-NPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH 182
             +RV+VTSS +A +  NP     V DET +TDL    + K WY  SKTLAE+ AW FA+++
Sbjct:   121 KRVIVTSSTAATLSINPN---DVVDETVFTDLSVYLAMKAWYGYSKTLAEETAWRFAKEN 177

Query:   183 GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLF 242
             G+D+V ++P   +GP++QP LN S  V+  L+ G   +  +++   + V+DV+ A +  F
Sbjct:   178 GIDLVVMNPGNVIGPVLQPTLNYSVEVIVDLINGKNPSNSFYYR-FMDVRDVSLAHIKAF 236

Query:   243 ESPAASGRYLCTNGIYQFGDFAERVSKLFPE 273
             E P+ASGRY+  +      D  + + +LFP+
Sbjct:   237 EVPSASGRYILADPDVTMKDIQKLLHELFPD 267

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

TAIR|locus:2012280 AT1G09500 [Arabidopsis thaliana (taxid:3702)]

 Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
 Identities = 115/271 (42%), Positives = 169/271 (62%)

Query:    10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEA 66
             + VCVTGA+G+I +W+VK LL   YT INATV    D   + HL AL GA +  L++F+A
Sbjct:     6 KVVCVTGASGYIASWIVKLLLFRGYT-INATVRDPKDRKKTDHLLALDGAKE-RLKLFKA 63

Query:    67 DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRR 125
             D+LD G+   A++GC+ VFH ASP  +    DP+ ELI PAV GT+NVL    +   V+R
Sbjct:    64 DLLDEGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKR 123

Query:   126 VVVTSSISAIVPNPGWK---GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH 182
             V++TSS++A++  P  K     V DET +T+  + + RK+WY +SKTLAE AAW FA+ +
Sbjct:   124 VILTSSMAAVLA-PETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN 182

Query:   183 GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLF 242
              +D++ ++P    GP++QP LN S AV+ +L++G       H    V V+DVA A V   
Sbjct:   183 EIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHR-FVDVRDVALAHVKAL 241

Query:   243 ESPAASGRYLCTNGIYQFGDFAERVSKLFPE 273
             E+P+A+GRY+    +    D    + + FP+
Sbjct:   242 ETPSANGRYIIDGPVVTIKDIENVLREFFPD 272

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	307
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	1e-128
PLN02662	322	PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase	1e-83
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	4e-73
PLN02214	342	PLN02214, PLN02214, cinnamoyl-CoA reductase	8e-66
PLN02989	325	PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase	1e-65
PLN02986	322	PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase	3e-65
PLN02650	351	PLN02650, PLN02650, dihydroflavonol-4-reductase	4e-63
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	3e-59
PLN00198	338	PLN00198, PLN00198, anthocyanidin reductase; Provi	3e-55
PLN02896	353	PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase	1e-50
PLN02583	297	PLN02583, PLN02583, cinnamoyl-CoA reductase	8e-47
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	5e-38
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	4e-36
PLN02686	367	PLN02686, PLN02686, cinnamoyl-CoA reductase	6e-34
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	2e-30
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	1e-26
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	1e-23
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	8e-21
cd08946	200	cd08946, SDR_e, extended (e) SDRs	1e-19
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	3e-19
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	1e-18
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	7e-18
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	2e-17
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	6e-17
cd09811	354	cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD	6e-16
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	4e-15
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	2e-12
cd05230	305	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase	4e-12
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	9e-12
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	1e-11
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	2e-11
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	5e-11
COG1086	588	COG1086, COG1086, Predicted nucleoside-diphosphate	2e-10
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	1e-09
pfam02719	280	pfam02719, Polysacc_synt_2, Polysaccharide biosynt	2e-09
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	1e-08
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	4e-08
cd05237	287	cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l	7e-08
cd05238	305	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n	1e-07
cd05247	323	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase,	2e-07
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	2e-07
COG1087	329	COG1087, GalE, UDP-glucose 4-epimerase [Cell envel	3e-07
cd05252	336	cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata	4e-07
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	4e-07
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	6e-07
TIGR01179	328	TIGR01179, galE, UDP-glucose-4-epimerase GalE	6e-07
pfam08659	181	pfam08659, KR, KR domain	7e-07
cd08957	307	cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic	1e-06
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	1e-06
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	2e-06
TIGR04130	337	TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehyd	2e-06
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	3e-06
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	5e-06
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	7e-06
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	8e-06
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	2e-05
PLN02657	390	PLN02657, PLN02657, 3,8-divinyl protochlorophyllid	2e-05
COG1089	345	COG1089, Gmd, GDP-D-mannose dehydratase [Cell enve	2e-05
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	2e-05
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-05
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	2e-05
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	2e-05
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	2e-05
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	2e-05
cd05272	308	cd05272, TDH_SDR_e, L-threonine dehydrogenase, ext	3e-05
cd09812	339	cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid	4e-05
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	9e-05
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	1e-04
TIGR03589	324	TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehyd	1e-04
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	2e-04
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	2e-04
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	2e-04
PRK05865	854	PRK05865, PRK05865, hypothetical protein; Provisio	3e-04
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	3e-04
cd05260	316	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase	4e-04
TIGR02622	349	TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydra	5e-04
COG3320	382	COG3320, COG3320, Putative dehydrogenase domain of	5e-04
PLN02166	436	PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase	6e-04
cd05233	234	cd05233, SDR_c, classical (c) SDRs	7e-04
cd08947	224	cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptio	9e-04
cd05253	332	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera	0.001
PLN02206	442	PLN02206, PLN02206, UDP-glucuronate decarboxylase	0.001
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	0.001
PLN02240	352	PLN02240, PLN02240, UDP-glucose 4-epimerase	0.001
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	0.002
TIGR01746	367	TIGR01746, Thioester-redct, thioester reductase do	0.003
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	0.003
PLN02695	370	PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase	0.003

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score =  366 bits (941), Expect = e-128
 Identities = 134/271 (49%), Positives = 189/271 (69%), Gaps = 8/271 (2%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---SHLFALPGAGDANLRVFEADV 68
           VCVTGA+GFIG+WLVK LL   YT + ATV    D    +HL  L GA +  L++F+AD+
Sbjct: 1   VCVTGASGFIGSWLVKRLLQRGYT-VRATVRDPGDEKKVAHLLELEGAKE-RLKLFKADL 58

Query: 69  LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVV 127
           LD G+   A++GC GVFHVASP    D  DPE+E+I PAV+GTLNVLEA  +   V+RVV
Sbjct: 59  LDYGSFDAAIDGCDGVFHVASPVDF-DSEDPEEEMIEPAVKGTLNVLEACAKAKSVKRVV 117

Query: 128 VTSSISAIVPNPGWK-GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
            TSS++A+V NP    GKV DE+ W+DL++CK  K WY +SKTLAEKAAWEFAE++G+D+
Sbjct: 118 FTSSVAAVVWNPNRGEGKVVDESCWSDLDFCKKTKLWYALSKTLAEKAAWEFAEENGLDL 177

Query: 187 VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA 246
           V ++P+  +GP +QP LN+S  ++  LL+G+ +  +   L  V V DVA A +LL+E P+
Sbjct: 178 VTVNPSLVVGPFLQPSLNSSSQLILSLLKGNAEMYQNGSLALVHVDDVADAHILLYEKPS 237

Query: 247 ASGRYLCTNGIYQFGDFAERVSKLFPEFPVH 277
           ASGRY+C++ +    + A  ++K +P++ + 
Sbjct: 238 ASGRYICSSHVVTRPELAALLAKKYPQYNIP 268

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|178268 PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase family protein

 Score =  254 bits (650), Expect = 1e-83
 Identities = 123/275 (44%), Positives = 176/275 (64%), Gaps = 10/275 (3%)

Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVF 64
           E + VCVTGA+G+I +WLVK LL   YT + ATV   +D   + HL AL GA +  L +F
Sbjct: 3   EGKVVCVTGASGYIASWLVKLLLQRGYT-VKATVRDPNDPKKTEHLLALDGAKE-RLHLF 60

Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA-AKRFGV 123
           +A++L+ G+    V+GC+GVFH ASP    D  DP+ ELI PAV+GTLNVL + AK   V
Sbjct: 61  KANLLEEGSFDSVVDGCEGVFHTASP-FYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSV 119

Query: 124 RRVVVTSSISAIVPN--PGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK 181
           +RVVVTSS++A+  N  P     V DET ++D  +C+  K WY +SKTLAE+AAW+FA++
Sbjct: 120 KRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE 179

Query: 182 HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLL 241
           +G+D+V I+PA  +GPL+QP LN S   +  L+ G++ T        V V+DVA A +  
Sbjct: 180 NGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQ-TFPNASYRWVDVRDVANAHIQA 238

Query: 242 FESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
           FE P+ASGRY     +  + +  + + +L+P   +
Sbjct: 239 FEIPSASGRYCLVERVVHYSEVVKILHELYPTLQL 273

Length = 322

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score =  226 bits (579), Expect = 4e-73
 Identities = 111/277 (40%), Positives = 149/277 (53%), Gaps = 17/277 (6%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS---HLFALPGAGDANLRVFEAD 67
            V VTGA GFI + +V+ LL   Y  +  TV   S S+    L    G  D  L     D
Sbjct: 1   LVLVTGATGFIASHIVEQLLKAGY-KVRGTVRSLSKSAKLKALLKAAGYND-RLEFVIVD 58

Query: 68  -VLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRR 125
            +    A   A++G   V HVASP     P D E ++I PAV+GTLNVLEAAK  G V+R
Sbjct: 59  DLTAPNAWDEALKGVDYVIHVASPFPFTGP-DAEDDVIDPAVEGTLNVLEAAKAAGSVKR 117

Query: 126 VVVTSSISAIV-PNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAAWEFAE--K 181
           VV+TSS++A+  P     GKVF E  W DL   KS     Y  SKTLAEKAAWEF +  K
Sbjct: 118 VVLTSSVAAVGDPTAEDPGKVFTEEDWNDLTISKSNGLDAYIASKTLAEKAAWEFVKENK 177

Query: 182 HGVDVVAIHPATCLGPLMQP-YLNASCAVLQQLLQGSKDT--QEYHWLGAVPVKDVAKAQ 238
              +++ I+P   LGP +    LN+S  ++ +LL G          + G V V+DVA A 
Sbjct: 178 PKFELITINPGYVLGPSLLADELNSSNELINKLLDGKLPAIPPNLPF-GYVDVRDVADAH 236

Query: 239 VLLFESPAASG-RYLCTNGIYQFGDFAERVSKLFPEF 274
           V   ESP A+G R++ + G + F + A+ + + FP+ 
Sbjct: 237 VRALESPEAAGQRFIVSAGPFSFQEIADLLREEFPQL 273

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|177862 PLN02214, PLN02214, cinnamoyl-CoA reductase

 Score =  209 bits (533), Expect = 8e-66
 Identities = 119/270 (44%), Positives = 170/270 (62%), Gaps = 10/270 (3%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGDANLRVFEAD 67
           +TVCVTGA G+I +W+VK LL+  YT +  TV    D  ++HL  L G G   L + +AD
Sbjct: 11  KTVCVTGAGGYIASWIVKILLERGYT-VKGTVRNPDDPKNTHLRELEG-GKERLILCKAD 68

Query: 68  VLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV 127
           + D  A+  A++GC GVFH ASP T +DP    ++++ PAV G   V+ AA    V+RVV
Sbjct: 69  LQDYEALKAAIDGCDGVFHTASPVT-DDP----EQMVEPAVNGAKFVINAAAEAKVKRVV 123

Query: 128 VTSSISAIVPNPGWKGK-VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
           +TSSI A+  +P    + V DE+ W+DL++CK+ K WY   K +AE+AAWE A++ GVD+
Sbjct: 124 ITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDL 183

Query: 187 VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA 246
           V ++P   LGP +QP +NAS   + + L GS  T        V V+DVA A VL++E+P+
Sbjct: 184 VVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPS 243

Query: 247 ASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
           ASGRYL        G+  E ++KLFPE+P+
Sbjct: 244 ASGRYLLAESARHRGEVVEILAKLFPEYPL 273

Length = 342

>gnl|CDD|178569 PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase family protein

 Score =  208 bits (530), Expect = 1e-65
 Identities = 113/271 (41%), Positives = 168/271 (61%), Gaps = 9/271 (3%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEA 66
           + VCVTGA+G+I +W+VK LL   Y +INATV    D   + HL AL GA +  L++F+A
Sbjct: 6   KVVCVTGASGYIASWIVKLLLFRGY-TINATVRDPKDRKKTDHLLALDGAKE-RLKLFKA 63

Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRR 125
           D+LD G+   A++GC+ VFH ASP  +    DP+ ELI PAV GT+NVL    +   V+R
Sbjct: 64  DLLDEGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKR 123

Query: 126 VVVTSSISAIVPNPGWKG--KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
           V++TSS++A++      G   V DET +T+  + + RK+WY +SKTLAE AAW FA+ + 
Sbjct: 124 VILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNE 183

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE 243
           +D++ ++P    GP++QP LN S AV+ +L++G       H    V V+DVA A V   E
Sbjct: 184 IDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHR-FVDVRDVALAHVKALE 242

Query: 244 SPAASGRYLCTNGIYQFGDFAERVSKLFPEF 274
           +P+A+GRY+    +    D    + + FP+ 
Sbjct: 243 TPSANGRYIIDGPVVTIKDIENVLREFFPDL 273

Length = 325

>gnl|CDD|178567 PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase family protein

 Score =  207 bits (528), Expect = 3e-65
 Identities = 113/271 (41%), Positives = 166/271 (61%), Gaps = 10/271 (3%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEA 66
           + VCVTGA+G+I +W+VK LL   YT + ATV   +D   + HL AL GA +  L++F+A
Sbjct: 6   KLVCVTGASGYIASWIVKLLLLRGYT-VKATVRDLTDRKKTEHLLALDGAKE-RLKLFKA 63

Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRR 125
           D+L+  +  +A+EGC  VFH ASP       DP+ ELI PA++GT+NVL   K    V+R
Sbjct: 64  DLLEESSFEQAIEGCDAVFHTASP-VFFTVKDPQTELIDPALKGTINVLNTCKETPSVKR 122

Query: 126 VVVTSSISAIVPN--PGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
           V++TSS +A++    P     V DET ++D   C+  K WYP+SK LAE AAWEFA+ +G
Sbjct: 123 VILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNG 182

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE 243
           +D+V ++P    GPL+QP LN S  ++   + G K+     +   V V+DVA A +   E
Sbjct: 183 IDMVVLNPGFICGPLLQPTLNFSVELIVDFING-KNLFNNRFYRFVDVRDVALAHIKALE 241

Query: 244 SPAASGRYLCTNGIYQFGDFAERVSKLFPEF 274
           +P+A+GRY+    I    D  + + +LFP+ 
Sbjct: 242 TPSANGRYIIDGPIMSVNDIIDILRELFPDL 272

Length = 322

>gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase

 Score =  202 bits (516), Expect = 4e-63
 Identities = 112/281 (39%), Positives = 166/281 (59%), Gaps = 20/281 (7%)

Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGS--DSSHLFALPGAGDANLRVF 64
           ++ETVCVTGA+GFIG+WLV  LL+  YT + ATV  P +     HL  LPGA    L ++
Sbjct: 4   QKETVCVTGASGFIGSWLVMRLLERGYT-VRATVRDPANVKKVKHLLDLPGA-TTRLTLW 61

Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-V 123
           +AD+   G+   A+ GC GVFHVA+P   E   DPE E+I P V G L++++A  +   V
Sbjct: 62  KADLAVEGSFDDAIRGCTGVFHVATPMDFE-SKDPENEVIKPTVNGMLSIMKACAKAKTV 120

Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK--W-YPVSKTLAEKAAWEFAE 180
           RR+V TSS +  V     +  V+DE  W+DL++C+ +K   W Y VSKTLAEKAAW++A 
Sbjct: 121 RRIVFTSS-AGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAA 179

Query: 181 KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW-----LGAVPVKDVA 235
           ++G+D ++I P   +GP +   +  S      L+ G+    E H+        V + D+ 
Sbjct: 180 ENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGN----EAHYSIIKQGQFVHLDDLC 235

Query: 236 KAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
            A + LFE PAA GRY+C++      D A+ + + +PE+ +
Sbjct: 236 NAHIFLFEHPAAEGRYICSSHDATIHDLAKMLREKYPEYNI 276

Length = 351

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score =  191 bits (486), Expect = 3e-59
 Identities = 98/282 (34%), Positives = 146/282 (51%), Gaps = 26/282 (9%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEADV 68
           V VTGA+GF+ + +V+ LL+  Y  + ATV   S     +HL  L  A    L +  AD+
Sbjct: 1   VLVTGASGFVASHVVEQLLERGYK-VRATVRDPSKVKKVNHLLDLD-AKPGRLELAVADL 58

Query: 69  LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVV 127
            D  +    ++GC GVFHVA+P +     DP  E+I PA+ GTLN L+AA     V+R V
Sbjct: 59  TDEQSFDEVIKGCAGVFHVATPVSFSSK-DPN-EVIKPAIGGTLNALKAAAAAKSVKRFV 116

Query: 128 VTSSISAI-VPNPGWKGKVFDETSWTDLEYCKSRKK--W-YPVSKTLAEKAAWEFAEKHG 183
           +TSS  ++ +P P  +G V DE SW   E+    KK  W Y  SKTLAEKAAW+FA+++ 
Sbjct: 117 LTSSAGSVLIPKPNVEGIVLDEKSWNLEEFDSDPKKSAWVYAASKTLAEKAAWKFADENN 176

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK---------DTQEYHWLGAVPVKDV 234
           +D++ + P   +G +      +S      L+ G++             Y     V V D+
Sbjct: 177 IDLITVIPTLTIGTIFDSETPSSSGWAMSLITGNEGVSPALALIPPGYY-----VHVVDI 231

Query: 235 AKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
             A +   E P A GRY+CT G + +    + + K +P +  
Sbjct: 232 CLAHIGCLELPIARGRYICTAGNFDWNTLLKTLRKKYPSYTF 273

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|215100 PLN00198, PLN00198, anthocyanidin reductase; Provisional

 Score =  182 bits (463), Expect = 3e-55
 Identities = 106/296 (35%), Positives = 161/296 (54%), Gaps = 28/296 (9%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---SHLFALPGAG 57
           MA+     ++T CV G  GF+ + L+K LL   Y ++N TV    +    +HL AL   G
Sbjct: 1   MATLTPTGKKTACVIGGTGFLASLLIKLLLQKGY-AVNTTVRDPENQKKIAHLRALQELG 59

Query: 58  DANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA 117
           D  L++F AD+ D  +    + GC  VFHVA+P       DPE ++I PA+QG  NVL+A
Sbjct: 60  D--LKIFGADLTDEESFEAPIAGCDLVFHVATPVNFASE-DPENDMIKPAIQGVHNVLKA 116

Query: 118 -AKRFGVRRVVVTSSISAI-VPNPGWKGKVFDETSWTDLEYCKSRK--KW-YPVSKTLAE 172
            AK   V+RV++TSS +A+ +      G V +E +WTD+E+  S K   W YP SKTLAE
Sbjct: 117 CAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAE 176

Query: 173 KAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA---- 228
           KAAW+FAE++ +D++ + P    GP +   + +S ++   L+ G     E+   G     
Sbjct: 177 KAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITG----NEFLINGLKGMQ 232

Query: 229 --------VPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
                     V+DV +A + L E  +ASGRY+C        + A+ + K +P++ V
Sbjct: 233 MLSGSISITHVEDVCRAHIFLAEKESASGRYICCAANTSVPELAKFLIKRYPQYQV 288

Length = 338

>gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase

 Score =  170 bits (433), Expect = 1e-50
 Identities = 105/294 (35%), Positives = 160/294 (54%), Gaps = 29/294 (9%)

Query: 3   SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLR 62
              E    T CVTGA G+IG+WLVK LL   YT ++AT+   + S HL +    GD  LR
Sbjct: 4   EGRESATGTYCVTGATGYIGSWLVKLLLQRGYT-VHATLRDPAKSLHLLSKWKEGD-RLR 61

Query: 63  VFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPE-------KELILPAVQGTLNVL 115
           +F AD+ + G+   AV+GC GVFHVA+    +   D          ++I PA++GTLNVL
Sbjct: 62  LFRADLQEEGSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVL 121

Query: 116 EAAKRFG-VRRVVVTSSISAIVP---NPGWKGKVFDETSWTDLEYCKSRKK--W-YPVSK 168
           ++  +   V+RVV TSSIS +     N  W+  V DET  T +++  + K   W Y +SK
Sbjct: 122 KSCLKSKTVKRVVFTSSISTLTAKDSNGRWR-AVVDETCQTPIDHVWNTKASGWVYVLSK 180

Query: 169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA 228
            L E+AA+++A+++G+D+V++   T  GP + P + +S  VL   + G  D++ +  L A
Sbjct: 181 LLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITG--DSKLFSILSA 238

Query: 229 VP----------VKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFP 272
           V           ++D+  A + L E   A GRY+C    Y   +    +SK +P
Sbjct: 239 VNSRMGSIALVHIEDICDAHIFLMEQTKAEGRYICCVDSYDMSELINHLSKEYP 292

Length = 353

>gnl|CDD|178195 PLN02583, PLN02583, cinnamoyl-CoA reductase

 Score =  159 bits (403), Expect = 8e-47
 Identities = 89/267 (33%), Positives = 138/267 (51%), Gaps = 36/267 (13%)

Query: 6   EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDAN--LRV 63
           ++  ++VCV  A+G++G WLVK LL   YT ++A V    ++     + G       L+V
Sbjct: 3   DESSKSVCVMDASGYVGFWLVKRLLSRGYT-VHAAVQKNGETEIEKEIRGLSCEEERLKV 61

Query: 64  FEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVD--PEKELILPA-VQGTLNVLEA-AK 119
           F+ D LD  ++  A++GC G+F     C  + P D     E ++   V+   NVLEA A+
Sbjct: 62  FDVDPLDYHSILDALKGCSGLF-----CCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQ 116

Query: 120 RFGVRRVVVTSSISAIVPNPGWKG------KVFDETSWTDLEYCKSRKKWYPVSKTLAEK 173
              + +VV TSS++A++    W+       K  DE SW+D  +C+  K W+ ++KTL+EK
Sbjct: 117 TDTIEKVVFTSSLTAVI----WRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEK 172

Query: 174 AAWEFAEKHGVDVVAIHPATCLGP-LMQ--PYLNASCAVLQQLLQGSKDTQEYHWLGAVP 230
            AW  A   GV++V+I+    +GP L Q  PY           L+G+    E   L  V 
Sbjct: 173 TAWALAMDRGVNMVSINAGLLMGPSLTQHNPY-----------LKGAAQMYENGVLVTVD 221

Query: 231 VKDVAKAQVLLFESPAASGRYLCTNGI 257
           V  +  A +  FE  ++ GRYLC N I
Sbjct: 222 VNFLVDAHIRAFEDVSSYGRYLCFNHI 248

Length = 297

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score =  136 bits (345), Expect = 5e-38
 Identities = 86/245 (35%), Positives = 118/245 (48%), Gaps = 29/245 (11%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA 73
           VTGA GF+G+ LV+ LL   Y  + A V  GSD+  L  LP      + V E D+ D+ +
Sbjct: 3   VTGATGFLGSNLVRALLAQGYR-VRALVRSGSDAVLLDGLP------VEVVEGDLTDAAS 55

Query: 74  VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS 133
           ++ A++GC  VFH+A+  +L    D  KEL    V+GT NVL+AA   GVRRVV TSSI+
Sbjct: 56  LAAAMKGCDRVFHLAAFTSLWAK-DR-KELYRTNVEGTRNVLDAALEAGVRRVVHTSSIA 113

Query: 134 AIVPNPGWKGKVFDETS-WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPA 192
           A+   P       DET+ W +  +       Y  SK LAE    E A + G+DVV ++P+
Sbjct: 114 ALGGPP---DGRIDETTPWNERPFPND----YYRSKLLAELEVLEAAAE-GLDVVIVNPS 165

Query: 193 TCLGPLMQPYLNAS-----CAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAA 247
              GP        S        L   L              V V+DVA+  +   E    
Sbjct: 166 AVFGPG--DEGPTSTGLDVLDYLNGKLPAYPPG----GTSFVDVRDVAEGHIAAMEKGRR 219

Query: 248 SGRYL 252
             RY+
Sbjct: 220 GERYI 224

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score =  131 bits (331), Expect = 4e-36
 Identities = 75/286 (26%), Positives = 108/286 (37%), Gaps = 26/286 (9%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA 73
           VTG  GFIG+ LV+ LL   +         G D       P    + +     D+ D   
Sbjct: 5   VTGGAGFIGSHLVERLLAAGHDVR------GLDRLRDGLDPL--LSGVEFVVLDLTDRDL 56

Query: 74  VSRAVEGCK-GVFHVASPCTLEDPVDPEKELIL-PAVQGTLNVLEAAKRFGVRRVVVTSS 131
           V    +G    V H+A+  ++ D    +    L   V GTLN+LEAA+  GV+R V  SS
Sbjct: 57  VDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASS 116

Query: 132 ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHP 191
           +S +  +P       DE               Y VSK  AE+    +A  +G+ VV + P
Sbjct: 117 VSVVYGDP--PPLPIDEDLGPPRPL-----NPYGVSKLAAEQLLRAYARLYGLPVVILRP 169

Query: 192 ATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP-------VKDVAKAQVLLFES 244
               GP  +P L +S  V   + Q  K        G          V DVA A +L  E+
Sbjct: 170 FNVYGPGDKPDL-SSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALEN 228

Query: 245 PAASGRYLCTNGI-YQFGDFAERVSKLFPEFPVHRFVFQSPLRFIL 289
           P      + +        + AE V++                R  L
Sbjct: 229 PDGGVFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRGDL 274

Length = 314

>gnl|CDD|215370 PLN02686, PLN02686, cinnamoyl-CoA reductase

 Score =  126 bits (319), Expect = 6e-34
 Identities = 85/291 (29%), Positives = 132/291 (45%), Gaps = 36/291 (12%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-----FALPG 55
             + A+ E   VCVTG   F+G  +V  LL + Y S+   V    D   L     F   G
Sbjct: 45  GDAGADAEARLVCVTGGVSFLGLAIVDRLLRHGY-SVRIAVDTQEDKEKLREMEMFGEMG 103

Query: 56  AGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDP------EKELILPAVQ 109
             +  +    A++ +  ++  A +GC GVFH ++       VDP       K +     +
Sbjct: 104 RSNDGIWTVMANLTEPESLHEAFDGCAGVFHTSAF------VDPAGLSGYTKSMAELEAK 157

Query: 110 GTLNVLEAAKRF-GVRRVVVTSSISAIVPNPGWKGK-------VFDETSWTDLEYCKSRK 161
            + NV+EA  R   VR+ V TSS+ A V    W+         V DE SW+D  +C+  K
Sbjct: 158 ASENVIEACVRTESVRKCVFTSSLLACV----WRQNYPHDLPPVIDEESWSDESFCRDNK 213

Query: 162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ 221
            WY + K  AEKAAW  A   G+ +  I PA   GP    +   +       L+G+++  
Sbjct: 214 LWYALGKLKAEKAAWRAARGKGLKLATICPALVTGP---GFFRRNSTATIAYLKGAQEML 270

Query: 222 EYHWLGAVPVKDVAKAQVLLFE---SPAASGRYLCTNGIYQFGDFAERVSK 269
               L    V+ +A+A V ++E   +  A GRY+C + +    D AE +++
Sbjct: 271 ADGLLATADVERLAEAHVCVYEAMGNKTAFGRYICFDHVVSREDEAEELAR 321

Length = 367

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score =  116 bits (292), Expect = 2e-30
 Identities = 71/192 (36%), Positives = 103/192 (53%), Gaps = 24/192 (12%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V VTGA GF+G+ +V+ LL+     +   V P SD  +L  L         + E D+ D
Sbjct: 2   KVLVTGATGFVGSAVVRLLLEQGEE-VRVLVRPTSDRRNLEGLDV------EIVEGDLRD 54

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
             ++ +AV GC+ +FHVA+   L  P DPE E+    V+GT N+L AA   GV RVV TS
Sbjct: 55  PASLRKAVAGCRALFHVAADYRLWAP-DPE-EMYAANVEGTRNLLRAALEAGVERVVYTS 112

Query: 131 SISAIVPNPGWKGKVFDETSWTDLE-----YCKSRKKWYPVSKTLAEKAAWEFAEKHGVD 185
           S++ +       G   DET+ + L+     Y +        SK LAE+AA E A + G+ 
Sbjct: 113 SVATLGVRG--DGTPADETTPSSLDDMIGHYKR--------SKFLAEQAALEMAAEKGLP 162

Query: 186 VVAIHPATCLGP 197
           VV ++P+T +GP
Sbjct: 163 VVIVNPSTPIGP 174

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score =  106 bits (266), Expect = 1e-26
 Identities = 60/193 (31%), Positives = 81/193 (41%), Gaps = 19/193 (9%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V VTGA+GFIG+ L + LL   +  + A     S +S    L  A          DV D
Sbjct: 1   NVLVTGADGFIGSHLTERLLREGH-EVRALDIYNSFNSW-GLLDNAVHDRFHFISGDVRD 58

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDP-VDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
           +  V   V+ C  VFH+A+   +      P    +   V GTLNVLEAA     +RVV T
Sbjct: 59  ASEVEYLVKKCDVVFHLAALIAIPYSYTAPL-SYVETNVFGTLNVLEAACVLYRKRVVHT 117

Query: 130 SS-----ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGV 184
           S+      +  VP         DE     L Y    +  Y  SK  A++ A+ +    G+
Sbjct: 118 STSEVYGTAQDVP--------IDEDH--PLLYINKPRSPYSASKQGADRLAYSYGRSFGL 167

Query: 185 DVVAIHPATCLGP 197
            V  I P    GP
Sbjct: 168 PVTIIRPFNTYGP 180

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 96.6 bits (241), Expect = 1e-23
 Identities = 69/255 (27%), Positives = 98/255 (38%), Gaps = 40/255 (15%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTG  GFIG+ LV+ LL   Y  I          S            +R  E D+ D 
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVIV---LGRRRRSESL-----NTGRIRFHEGDLTDP 52

Query: 72  GAVSRAVEGCK--GVFHVASPC----TLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR 125
            A+ R +   +   V H+A+      + EDP D     I   V GTL +LEAA+R GV+R
Sbjct: 53  DALERLLAEVQPDAVIHLAAQSGVGASFEDPAD----FIRANVLGTLRLLEAARRAGVKR 108

Query: 126 VVVTSSISAIVPNPGWKGKVFDETSWT-DLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGV 184
            V  SS S +  +         E +    L         Y  +K  AE+    +A  +G+
Sbjct: 109 FVFASS-SEVYGDVA--DPPITEDTPLGPLSP-------YAAAKLAAERLVEAYARAYGL 158

Query: 185 DVVAIHPATCLGPLMQ--------PYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAK 236
             V +      GP           P L       + +L     TQ   +   + V DVA+
Sbjct: 159 RAVILRLFNVYGPGNPDPFVTHVIPALIRRILEGKPILLLGDGTQRRDF---LYVDDVAR 215

Query: 237 AQVLLFESPAASGRY 251
           A +L  E P     Y
Sbjct: 216 AILLALEHPDGGEIY 230

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 90.6 bits (225), Expect = 8e-21
 Identities = 64/199 (32%), Positives = 87/199 (43%), Gaps = 22/199 (11%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           +V VTG +GF G  LVK LL+   T +    F  +      AL      N+   + D+ D
Sbjct: 1   SVLVTGGSGFFGERLVKQLLERGGTYVR--SFDIAPP--GEALSAWQHPNIEFLKGDITD 56

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
              V +A+ G   VFH A+   L  P D   E+    V GT NVL+A +R GV++ V TS
Sbjct: 57  RNDVEQALSGADCVFHTAAIVPLAGPRDLYWEV---NVGGTQNVLDACQRCGVQKFVYTS 113

Query: 131 SISAIVPNPGWKGKVF---DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVV 187
           S S I       G+     DET    L Y       Y  +K +AE    E   +  +   
Sbjct: 114 SSSVIFG-----GQNIHNGDET----LPYPPLDSDMYAETKAIAEIIVLEANGRDDLLTC 164

Query: 188 AIHPATCLGP---LMQPYL 203
           A+ PA   GP    + P L
Sbjct: 165 ALRPAGIFGPGDQGLVPIL 183

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 85.0 bits (211), Expect = 1e-19
 Identities = 63/250 (25%), Positives = 96/250 (38%), Gaps = 66/250 (26%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTG  GFIG+ LV+ LL+  +                            V   D LD 
Sbjct: 1   ILVTGGAGFIGSHLVRRLLERGH---------------------------EVVVIDRLDV 33

Query: 72  GAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV 127
                       V H+A+    P + ++P     E     V GTLN+LEAA++ GV+R V
Sbjct: 34  ------------VVHLAALVGVPASWDNPD----EDFETNVVGTLNLLEAARKAGVKRFV 77

Query: 128 VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVV 187
             SS S        +G   +E +        S    Y VSK  AE     + E +G+ VV
Sbjct: 78  YASSASV---YGSPEGLPEEEETPP---RPLSP---YGVSKLAAEHLLRSYGESYGLPVV 128

Query: 188 AIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY-------HWLGAVPVKDVAKAQVL 240
            +  A   GP  +P L+    V+   ++ + + +              + V DV +A + 
Sbjct: 129 ILRLANVYGPGQRPRLD---GVVNDFIRRALEGKPLTVFGGGNQTRDFIHVDDVVRAILH 185

Query: 241 LFESPAASGR 250
             E+P   G 
Sbjct: 186 ALENPLEGGG 195

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 85.7 bits (213), Expect = 3e-19
 Identities = 74/255 (29%), Positives = 109/255 (42%), Gaps = 37/255 (14%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           V VTG  GFIG+ LV+ LL+  +  I   V     +     LP     N++  E D+ D 
Sbjct: 2   VLVTGGAGFIGSHLVERLLERGHEVI---VLDNLSTGKKENLP-EVKPNVKFIEGDIRDD 57

Query: 72  GAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV 127
             V  A EG   VFH A+    P ++EDP+   +  +L    GTLN+LEAA++ GV+R V
Sbjct: 58  ELVEFAFEGVDYVFHQAAQASVPRSIEDPIKDHEVNVL----GTLNLLEAARKAGVKRFV 113

Query: 128 VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVV 187
             SS S     P       DE    +          Y VSK   E     FA  +G+  V
Sbjct: 114 YASSSSVYGDPP---YLPKDEDHPPNPLSP------YAVSKYAGELYCQVFARLYGLPTV 164

Query: 188 AIHPATCLGPLMQP---YLNASCAVLQQLLQG--------SKDTQEYHWLGAVPVKDVAK 236
           ++      GP   P   Y       +++ L+G         + T+++       V+DV +
Sbjct: 165 SLRYFNVYGPRQDPNGGYAAVIPIFIERALKGEPPTIYGDGEQTRDF-----TYVEDVVE 219

Query: 237 AQVLLFESPAASGRY 251
           A +L   + A    Y
Sbjct: 220 ANLLAATAGAGGEVY 234

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 84.0 bits (208), Expect = 1e-18
 Identities = 67/305 (21%), Positives = 106/305 (34%), Gaps = 40/305 (13%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGAGDANLRVFEADV--- 68
           VTG  GF+G  LVK LL+N +  +   V   S           G     +RV E D+   
Sbjct: 3   VTGGTGFLGRHLVKRLLENGF-KVLVLVRSESLGEAHERIEEAGLEADRVRVLEGDLTQP 61

Query: 69  ---LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR 125
              L + A          V H A+     D   P ++     + GT +VLE A R  ++R
Sbjct: 62  NLGLSAAASRELAGKVDHVIHCAA---SYDFQAPNEDAWRTNIDGTEHVLELAARLDIQR 118

Query: 126 VVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVD 185
               S+        G           T+L   ++ K  Y  SK  AE+     A +  + 
Sbjct: 119 FHYVSTAYVAGNREGN-------IRETELNPGQNFKNPYEQSKAEAEQLVRAAATQ--IP 169

Query: 186 VVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY--------HWLGAVPVKDVAKA 237
           +    P+  +G      +      L +LL        +          L  VPV  VA A
Sbjct: 170 LTVYRPSIVVGDSKTGRIE-KIDGLYELLNLLAKLGRWLPMPGNKGARLNLVPVDYVADA 228

Query: 238 QVLLFESPAASGR-YLCTNG-IYQFGDFAERVSK--------LFPEFPVHRFVFQSPLRF 287
            V L + P A+G+ +  T+       + A+            +      +  +  +  R 
Sbjct: 229 IVYLSKKPEANGQIFHLTDPTPQTLREIADLFKSAFLSPGLLVLLMNEPNASLPNALRRS 288

Query: 288 ILWLA 292
           +L L 
Sbjct: 289 LLNLP 293

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score = 81.6 bits (202), Expect = 7e-18
 Identities = 49/129 (37%), Positives = 68/129 (52%), Gaps = 17/129 (13%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH--LFALPGAGDANLRVFEADVL 69
           V VTGA+GFIG+ LV+ L+   Y  + A V   S +S   L   P      + V   D+ 
Sbjct: 1   VLVTGADGFIGSHLVEALVRQGYE-VRAFVLYNSFNSWGWLDTSPPEVKDKIEVVTGDIR 59

Query: 70  DSGAVSRAVEGCKGVFHVAS----PCTLEDP---VDPEKELILPAVQGTLNVLEAAKRFG 122
           D  +V +A++GC  VFH+A+    P +   P   VD         V GTLNVL+AA+  G
Sbjct: 60  DPDSVRKAMKGCDVVFHLAALIAIPYSYIAPDSYVDTN-------VTGTLNVLQAARDLG 112

Query: 123 VRRVVVTSS 131
           V +VV TS+
Sbjct: 113 VEKVVHTST 121

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 80.5 bits (199), Expect = 2e-17
 Identities = 50/189 (26%), Positives = 70/189 (37%), Gaps = 23/189 (12%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V VTGANGFIG  LV  LL        A         +      +         A++ D
Sbjct: 1   KVLVTGANGFIGRALVDKLLSRGEEVRIA-------VRNAENAEPSVVL------AELPD 47

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAV--QGTLNVLEAAKRFGVRRVVV 128
             + +    G   V H+A+   + +    +       V  + T  +  AA R GV+R V 
Sbjct: 48  IDSFTDLFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQGVKRFVF 107

Query: 129 TSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVA 188
            SS+          G  FDET     +        Y  SK  AE+A  E     G++VV 
Sbjct: 108 LSSVKVNG-EGT-VGAPFDETDPPAPQ------DAYGRSKLEAERALLELGASDGMEVVI 159

Query: 189 IHPATCLGP 197
           + P    GP
Sbjct: 160 LRPPMVYGP 168

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 78.9 bits (195), Expect = 6e-17
 Identities = 71/280 (25%), Positives = 108/280 (38%), Gaps = 39/280 (13%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVF-EADVLDSG 72
           VTG  GF+G  +V+ LL          VF    S  L  L       +  + E DV D  
Sbjct: 2   VTGGGGFLGRHIVRLLLREG-ELQEVRVFDLRFSPEL--LEDFSKLQVITYIEGDVTDKQ 58

Query: 73  AVSRAVEGCKGVFHVASPCTLED--PVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
            + RA++G   V H A+   + D         ++   V+GT NVL+A  + GVR +V TS
Sbjct: 59  DLRRALQGSDVVIHTAA---IIDVFGKAYRDTIMKVNVKGTQNVLDACVKAGVRVLVYTS 115

Query: 131 SISAIVPNPGWKGKVF---DETSWTDLEYCKSRKKWYPVSKTLAEKA-----AWEFAEKH 182
           S+  + PN    G+     DET      Y  + +  YP SK LAEK              
Sbjct: 116 SMEVVGPNSY--GQPIVNGDET----TPYESTHQDPYPESKALAEKLVLKANGSTLKNGG 169

Query: 183 GVDVVAIHPATCLGP---LMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQV 239
            +   A+ PA   G     + P+L           +             V V +VA A +
Sbjct: 170 RLYTCALRPAGIFGEGDPFLFPFLVRLLKNGLAKFRTGDKNVLSDR---VYVGNVAWAHI 226

Query: 240 LL-------FESPAASGR-YLCTNG--IYQFGDFAERVSK 269
           L         ++ + +G+ Y  ++      + DF   + K
Sbjct: 227 LAARALQDPKKASSIAGQFYFISDDTPHNSYDDFNRTLLK 266

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs

 Score = 76.8 bits (189), Expect = 6e-16
 Identities = 51/164 (31%), Positives = 70/164 (42%), Gaps = 8/164 (4%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVF---PGSDSSHLFALPGAGDANLRVFEADVLD 70
           VTG  GF+G  +++ LL+         V     G +    F     G   +   E D+ D
Sbjct: 4   VTGGGGFLGQHIIRLLLERKEELKEIRVLDKAFGPELIEHFE-KSQGKTYVTDIEGDIKD 62

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
              + RA +G   V H A+   +  P + E EL    V GT  VLEA  +  V+R+V TS
Sbjct: 63  LSFLFRACQGVSVVIHTAAIVDVFGPPNYE-ELEEVNVNGTQAVLEACVQNNVKRLVYTS 121

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKA 174
           SI    PN  +KG+        D  Y  +    Y  SK LAE  
Sbjct: 122 SIEVAGPN--FKGRPI-FNGVEDTPYEDTSTPPYASSKLLAENI 162

This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 74.3 bits (183), Expect = 4e-15
 Identities = 77/309 (24%), Positives = 122/309 (39%), Gaps = 37/309 (11%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           +  V G +GF+G  LV+ LL     +++  VF   D    F L  +    ++    D+ D
Sbjct: 1   SCLVVGGSGFLGRHLVEQLLRRGNPTVH--VF---DIRPTFELDPSSSGRVQFHTGDLTD 55

Query: 71  SGAVSRAVEGCKG---VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV 127
              + +A    KG   VFH ASP    +     K      VQGT NV+EA ++ GV+++V
Sbjct: 56  PQDLEKAFN-EKGPNVVFHTASPDHGSNDDLYYK----VNVQGTRNVIEACRKCGVKKLV 110

Query: 128 VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEF-AEKHGVDV 186
            TSS S +           DE+    L Y    +  Y  +K LAEK   +    + G+  
Sbjct: 111 YTSSASVVFNGQDIING--DES----LPYPDKHQDAYNETKALAEKLVLKANDPESGLLT 164

Query: 187 VAIHPATCLGP---LMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE 243
            A+ PA   GP    + P L  +    +   Q       + +     V++VA A +L  +
Sbjct: 165 CALRPAGIFGPGDRQLVPGLLKAAKNGKTKFQIGDGNNLFDF---TYVENVAHAHILAAD 221

Query: 244 -------SPAASGR-YLCTNG--IYQFGDFAERVSKLFPEFPVHRFVFQSPLRFILWLAI 293
                  +   +G  +  TN   IY F DFA  + +              P+   L   +
Sbjct: 222 ALLSSSHAETVAGEAFFITNDEPIY-FWDFARAIWEGLGYERPPSIKLPRPVALYLASLL 280

Query: 294 ILPHEKNGV 302
               +  G 
Sbjct: 281 EWTCKVLGK 289

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 64.6 bits (158), Expect = 2e-12
 Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 16/137 (11%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V V GA G +G  +V+ LLD  Y  + A V   S +  L A      A   V   D+ D
Sbjct: 1   KVLVVGATGKVGRHVVRELLDRGYQ-VRALVRDPSQAEKLEA------AGAEVVVGDLTD 53

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAV--QGTLNVLEAAKRFGVRRVVV 128
           + +++ A+EG   V   A     +     E      AV   G +N+++AAK+ GV+R V+
Sbjct: 54  AESLAAALEGIDAVISAAG-SGGKGGPRTE------AVDYDGNINLIDAAKKAGVKRFVL 106

Query: 129 TSSISAIVPNPGWKGKV 145
            SSI A  P+   +   
Sbjct: 107 VSSIGADKPSHPLEALG 123

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs

 Score = 65.4 bits (160), Expect = 4e-12
 Identities = 53/217 (24%), Positives = 79/217 (36%), Gaps = 62/217 (28%)

Query: 10  ETVCVTGANGFIGTWLVKTLL---------DNNYTSINATVFPGSDSSHLFALPGAGDAN 60
           + + +TG  GF+G+ L   LL         DN +T     +       HL      G  N
Sbjct: 1   KRILITGGAGFLGSHLCDRLLEDGHEVICVDNFFTGRKRNI------EHL-----IGHPN 49

Query: 61  LRVFEADVLDS--GAVSRAVEGCKGVFHVASPCT----LEDPVDPEKELILPAVQGTLNV 114
                 DV +     V +       ++H+A P +      +P+    + +   V GTLN+
Sbjct: 50  FEFIRHDVTEPLYLEVDQ-------IYHLACPASPVHYQYNPI----KTLKTNVLGTLNM 98

Query: 115 LEAAKRFGVRRVVVTSSISA-----IVPNPGWKGKVFDETSW-----TDLEYCKSRKKWY 164
           L  AKR G  RV++ S+        + P P        E+ W          C      Y
Sbjct: 99  LGLAKRVGA-RVLLASTSEVYGDPEVHPQP--------ESYWGNVNPIGPRSC------Y 143

Query: 165 PVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP 201
              K +AE     +  +HGVDV         GP M P
Sbjct: 144 DEGKRVAETLCMAYHRQHGVDVRIARIFNTYGPRMHP 180

UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score = 64.2 bits (157), Expect = 9e-12
 Identities = 41/122 (33%), Positives = 56/122 (45%), Gaps = 7/122 (5%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHLFALPGAGDANLRVFEADVLD 70
           + VTG  GFIG+ LV  LL+         V    S        P   +   R  + D+LD
Sbjct: 2   ILVTGGAGFIGSHLVDRLLEEGN---EVVVVDNLSSGRRENIEPEFENKAFRFVKRDLLD 58

Query: 71  SGAVSRAVEGCKGVFHVAS-PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
           + A   A +    VFH+A+ P       DP+ +L    V  T NVLEA +  GV+R+V  
Sbjct: 59  T-ADKVAKKDGDTVFHLAANPDVRLGATDPDIDLEE-NVLATYNVLEAMRANGVKRIVFA 116

Query: 130 SS 131
           SS
Sbjct: 117 SS 118

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 62.7 bits (153), Expect = 1e-11
 Identities = 40/135 (29%), Positives = 59/135 (43%), Gaps = 18/135 (13%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINA-TVFPGSDSSHLFALPGAGDANLRVFEADVLDSG 72
           V GA G  G  +V+ LL +    + A T  P S ++   A PG       V + D+ D  
Sbjct: 3   VFGATGKQGGSVVRALLKDPGFKVRALTRDPSSPAAKALAAPGV-----EVVQGDLDDPE 57

Query: 73  AVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI 132
           ++  A++G  GVF V            E E+     QG  NV++AAKR GV+  V +S  
Sbjct: 58  SLEAALKGVYGVFLVTDF----WEAGGEDEI----AQGK-NVVDAAKRAGVQHFVFSSVP 108

Query: 133 SA---IVPNPGWKGK 144
                 +  P +  K
Sbjct: 109 DVEKLTLAVPHFDSK 123

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 61.6 bits (150), Expect = 2e-11
 Identities = 48/224 (21%), Positives = 67/224 (29%), Gaps = 51/224 (22%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA 73
           V GA G  G  LVK LL         T    + S        A    +   + D+ D   
Sbjct: 3   VIGATGKTGRRLVKELLARG---HQVTALSRNPSK-------APAPGVTPVQKDLFDLAD 52

Query: 74  VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS 133
           ++ A+ G   V           P D +         G  ++L+AA R GVRR+VV S+  
Sbjct: 53  LAEALAGVDAVVDAFGA----RPDDSD---------GVKHLLDAAARAGVRRIVVVSAAG 99

Query: 134 AIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPAT 193
                PG                              A+ AA E     G+D   + P  
Sbjct: 100 LYRDEPGTFRLDDAPL---------------FPPYARAKAAAEELLRASGLDWTIVRP-- 142

Query: 194 CLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKA 237
             G L               +    D        ++   DVA A
Sbjct: 143 --GALFDEEGE------TYEIGTEGDPAG---ESSISRADVAAA 175

Length = 182

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 61.9 bits (151), Expect = 5e-11
 Identities = 47/191 (24%), Positives = 75/191 (39%), Gaps = 18/191 (9%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           V + G NGFIG+ LV  LL+         VF    S   + LP  G   +   + D  + 
Sbjct: 2   VLIVGGNGFIGSHLVDALLEE---GPQVRVF--DRSIPPYELPLGG---VDYIKGDYENR 53

Query: 72  GAVSRAVEGCKGVFHVASPCT-LEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
             +  A+ G   V H+AS         +P  + I   V  T+ +LEA    G+ +++  S
Sbjct: 54  ADLESALVGIDTVIHLASTTNPATSNKNPILD-IQTNVAPTVQLLEACAAAGIGKIIFAS 112

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
           S   +   P  +     E+  T           Y +SK   EK    +   +G+D   + 
Sbjct: 113 SGGTVYGVP--EQLPISESDPTLPI------SSYGISKLAIEKYLRLYQYLYGLDYTVLR 164

Query: 191 PATCLGPLMQP 201
            +   GP  +P
Sbjct: 165 ISNPYGPGQRP 175

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 61.1 bits (149), Expect = 2e-10
 Identities = 50/138 (36%), Positives = 68/138 (49%), Gaps = 18/138 (13%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP-----GAGDANLRVFE 65
           TV VTG  G IG+ L + +L  N   I   +F   D   L+ +         +  LR + 
Sbjct: 252 TVLVTGGGGSIGSELCRQILKFNPKEI--ILF-SRDEYKLYLIDMELREKFPELKLRFYI 308

Query: 66  ADVLDSGAVSRAVEGCK--GVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAK 119
            DV D   V RA+EG K   VFH A+    P  +E   +PE E I   V GT NV EAA 
Sbjct: 309 GDVRDRDRVERAMEGHKVDIVFHAAALKHVP-LVEY--NPE-EAIKTNVLGTENVAEAAI 364

Query: 120 RFGVRRVVVTSSISAIVP 137
           + GV++ V+ S+  A+ P
Sbjct: 365 KNGVKKFVLISTDKAVNP 382

Length = 588

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 57.7 bits (140), Expect = 1e-09
 Identities = 33/147 (22%), Positives = 58/147 (39%), Gaps = 5/147 (3%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNY--TSINATVFPGSDSSHLFALPGAGDANLRVFEAD 67
             V +TG  GFIG+ L +  L   +     +  +  GS  +  +      D  +R    D
Sbjct: 1   MRVLITGGAGFIGSNLARFFLKQGWEVIGFDNLMRRGSFGNLAWLKANREDGGVRFVHGD 60

Query: 68  VLDSGAVSRAVEGCKGVFHVAS-PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
           + +   +    E    + H A+ P        P  +    A+ GTLNVLEAA++      
Sbjct: 61  IRNRNDLEDLFEDIDLIIHTAAQPSVTTSASSPRLDFETNAL-GTLNVLEAARQHAPNAP 119

Query: 127 VVTSSISAIVPN-PGWKGKVFDETSWT 152
            + +S + +  + P +      ET + 
Sbjct: 120 FIFTSTNKVYGDLPNYLPLEELETRYE 146

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein

 Score = 57.1 bits (139), Expect = 2e-09
 Identities = 47/137 (34%), Positives = 62/137 (45%), Gaps = 18/137 (13%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-----PGAGDANLRVFEA 66
           V VTG  G IG+ L + +L  N   I   +F   D   L+ +         D  LR F  
Sbjct: 1   VLVTGGGGSIGSELCRQILKFNPKKI--ILF-SRDEFKLYEIRQELRQEYNDPKLRFFIG 57

Query: 67  DVLDSGAVSRAVE--GCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKR 120
           DV D   + RA+E  G   VFH A+    P    +P+    E I   V GT NV EAA  
Sbjct: 58  DVRDRERLERAMEQHGVDTVFHAAALKHVPLVEYNPM----EAIKTNVLGTENVAEAAIE 113

Query: 121 FGVRRVVVTSSISAIVP 137
            GV + V+ S+  A+ P
Sbjct: 114 NGVEKFVLISTDKAVNP 130

This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 53.8 bits (130), Expect = 1e-08
 Identities = 38/183 (20%), Positives = 60/183 (32%), Gaps = 34/183 (18%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA 73
           + GA G  G+ +V+  L   +     T     D + L A        L+V + DVLD   
Sbjct: 4   IIGATGRTGSAIVREALARGH---EVTALV-RDPAKLPAE----HEKLKVVQGDVLDLED 55

Query: 74  VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS 133
           V  A+EG   V           P            +GT N++ A K  GV+R++V     
Sbjct: 56  VKEALEGQDAVISALGTRNDLSPTTL-------HSEGTRNIVSAMKAAGVKRLIVVGGAG 108

Query: 134 AIVPNPG----WKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAI 189
           ++   P         +F                   V          +   + G+D  A+
Sbjct: 109 SLDDRPKVTLVLDTLLF-------------PPALRRV--AEDHARMLKVLRESGLDWTAV 153

Query: 190 HPA 192
            P 
Sbjct: 154 RPP 156

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 53.0 bits (128), Expect = 4e-08
 Identities = 39/155 (25%), Positives = 59/155 (38%), Gaps = 23/155 (14%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA 73
           VTGA G +GT +V+ LL     S+ A V     +   FA  G       V + D  D   
Sbjct: 3   VTGATGKLGTAVVELLLAKV-ASVVALVRNPEKAK-AFAADGV-----EVRQGDYDDPET 55

Query: 74  VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS--- 130
           + RA EG   +  ++    LED +   K           N ++AAK+ GV+ +V  S   
Sbjct: 56  LERAFEGVDRLLLISPSD-LEDRIQQHK-----------NFIDAAKQAGVKHIVYLSASG 103

Query: 131 -SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY 164
               +        G        + + Y   R  W+
Sbjct: 104 ADEDSPFLLARDHGATEKYLEASGIPYTILRPGWF 138

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs

 Score = 52.6 bits (127), Expect = 7e-08
 Identities = 45/138 (32%), Positives = 61/138 (44%), Gaps = 18/138 (13%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF----ALPGAGDA-NLRVFE 65
           T+ VTG  G IG+ LV+ +L          +    D + L      L        LR   
Sbjct: 4   TILVTGGAGSIGSELVRQILK---FGPKKLIVFDRDENKLHELVRELRSRFPHDKLRFII 60

Query: 66  ADVLDSGAVSRAVE--GCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAK 119
            DV D   + RA +  G   VFH A+    P ++ED   PE E I   V GT NV++AA 
Sbjct: 61  GDVRDKERLRRAFKERGPDIVFHAAALKHVP-SMEDN--PE-EAIKTNVLGTKNVIDAAI 116

Query: 120 RFGVRRVVVTSSISAIVP 137
             GV + V  S+  A+ P
Sbjct: 117 ENGVEKFVCISTDKAVNP 134

UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287

>gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs

 Score = 52.0 bits (125), Expect = 1e-07
 Identities = 46/192 (23%), Positives = 72/192 (37%), Gaps = 23/192 (11%)

Query: 11  TVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV 68
            V +TGA+GF+G  L + LL +  N   I   V      S        G   +     D+
Sbjct: 2   KVLITGASGFVGQRLAERLLSDVPNERLILIDVVSPKAPS--------GAPRVTQIAGDL 53

Query: 69  LDSGAVSRAVEG-CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRV 126
                +     G    VFH+A+  +     D +    +  V GT N+LEA ++ G   R 
Sbjct: 54  AVPALIEALANGRPDVVFHLAAIVSGGAEADFDLGYRV-NVDGTRNLLEALRKNGPKPRF 112

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
           V TSS++           V D T+             Y   K + E    +++ +  VD 
Sbjct: 113 VFTSSLAVYGLPL--PNPVTDHTALDPASS-------YGAQKAMCELLLNDYSRRGFVDG 163

Query: 187 VAIHPAT-CLGP 197
             +   T C+ P
Sbjct: 164 RTLRLPTVCVRP 175

Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

 Score = 51.8 bits (125), Expect = 2e-07
 Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 17/129 (13%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V VTG  G+IG+  V  LL+  Y   +  V     + H  ALP      +  +E D+ D
Sbjct: 1   KVLVTGGAGYIGSHTVVELLEAGY---DVVVLDNLSNGHREALPRIEKIRIEFYEGDIRD 57

Query: 71  SGAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPA------VQGTLNVLEAAKRFG 122
             A+ +     K   V H A+   + + V        P       V GTLN+LEA +  G
Sbjct: 58  RAALDKVFAEHKIDAVIHFAALKAVGESVQ------KPLKYYDNNVVGTLNLLEAMRAHG 111

Query: 123 VRRVVVTSS 131
           V+  V +SS
Sbjct: 112 VKNFVFSSS 120

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 51.2 bits (123), Expect = 2e-07
 Identities = 55/192 (28%), Positives = 71/192 (36%), Gaps = 26/192 (13%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVF-EADVLD 70
           + VTGA G +G  L + L  +    +            L      G      +   D+ D
Sbjct: 1   ILVTGAAGGLGRLLARRLAASPR--VIGVDG-------LDRRRPPGSPPKVEYVRLDIRD 51

Query: 71  SGAVSRAVE-GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
             A     E     V H+A    L+ P D   E     V GT NVL+A    GV RVVVT
Sbjct: 52  PAAADVFREREADAVVHLAF--ILDPPRDGA-ERHRINVDGTQNVLDACAAAGVPRVVVT 108

Query: 130 SSI---SAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH-GVD 185
           SS+    A   NP         T    L         Y   K   E+   EF  +H  ++
Sbjct: 109 SSVAVYGAHPDNPAP------LTEDAPLRGSPEFA--YSRDKAEVEQLLAEFRRRHPELN 160

Query: 186 VVAIHPATCLGP 197
           V  + PAT LGP
Sbjct: 161 VTVLRPATILGP 172

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

 Score = 50.6 bits (122), Expect = 3e-07
 Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 16/127 (12%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V VTG  G+IG+  V+ LL   +      V     + H  AL        + +E D+LD
Sbjct: 2   KVLVTGGAGYIGSHTVRQLLKTGH---EVVVLDNLSNGHKIALL---KLQFKFYEGDLLD 55

Query: 71  SGAVSR--AVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
              ++          V H A+      ++++P+    +     V GTLN++EA  + GV+
Sbjct: 56  RALLTAVFEENKIDAVVHFAASISVGESVQNPL----KYYDNNVVGTLNLIEAMLQTGVK 111

Query: 125 RVVVTSS 131
           + + +S+
Sbjct: 112 KFIFSST 118

Length = 329

>gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 50.4 bits (121), Expect = 4e-07
 Identities = 41/132 (31%), Positives = 59/132 (44%), Gaps = 21/132 (15%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVF----PGSDSSHLFALPGAGDANLRVFEA 66
            V VTG  GF G+WL   L +     + A V         + +LF L    D  +     
Sbjct: 6   RVLVTGHTGFKGSWLSLWLQE-----LGAKVIGYSLDPPTNPNLFEL-ANLDNKISSTRG 59

Query: 67  DVLDSGAVSRAVEGCKG--VFHVA-SPC---TLEDPVDPEKELILPAVQGTLNVLEAAKR 120
           D+ D  A+  A+   +   VFH+A  P    + +DPV    E     V GT+N+LEA + 
Sbjct: 60  DIRDLNALREAIREYEPEIVFHLAAQPLVRLSYKDPV----ETFETNVMGTVNLLEAIRE 115

Query: 121 FG-VRRVVVTSS 131
            G V+ VV  +S
Sbjct: 116 TGSVKAVVNVTS 127

This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 49.5 bits (119), Expect = 4e-07
 Identities = 39/150 (26%), Positives = 55/150 (36%), Gaps = 27/150 (18%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSHLFALPGAGDANLRVFEADVL 69
            V +TG +  IG  L   L    Y      V   + +   L +L    + NL V E DV 
Sbjct: 2   VVLITGCSSGIGLALALALAAQGYR-----VIATARNPDKLESLGELLNDNLEVLELDVT 56

Query: 70  DSGAVSRAVEGCKGVFH----------VASPCTLEDPVDPE--KELILPAVQGTLNVLEA 117
           D  ++  AV+     F                 LE+    E  +EL    V G L V  A
Sbjct: 57  DEESIKAAVKEVIERFGRIDVLVNNAGYGLFGPLEE-TSIEEVRELFEVNVFGPLRVTRA 115

Query: 118 A------KRFGVRRVVVTSSISAIVPNPGW 141
                  +  G  R+V  SS++ +VP P  
Sbjct: 116 FLPLMRKQGSG--RIVNVSSVAGLVPTPFL 143

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 49.6 bits (119), Expect = 6e-07
 Identities = 35/131 (26%), Positives = 54/131 (41%), Gaps = 21/131 (16%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDA-NLRVFEADVL 69
            V V GA GFIG ++V  L       I     P    ++   L   GD   +   E D+ 
Sbjct: 2   VVTVFGATGFIGRYVVNRLAKRGSQVI----VPYRCEAYARRLLVMGDLGQVLFVEFDLR 57

Query: 70  DSGAVSRAVEGCK------GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
           D  ++ +A+EG        G  +     + ED V          V+G   + +AAK  GV
Sbjct: 58  DDESIRKALEGSDVVINLVGRLYETKNFSFED-VH---------VEGPERLAKAAKEAGV 107

Query: 124 RRVVVTSSISA 134
            R++  S++ A
Sbjct: 108 ERLIHISALGA 118

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE

 Score = 49.6 bits (119), Expect = 6e-07
 Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 6/123 (4%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVF-EADVLD 70
           + VTG  G+IG+  V+ LL++ +  +   +     +    ALP         F E D+ D
Sbjct: 2   ILVTGGAGYIGSHTVRQLLESGHEVV---ILDNLSNGSREALPRGERITPVTFVEGDLRD 58

Query: 71  SGAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
              + R  E  K   V H A    + + V    +     V GTLN+LEA ++ GV++ + 
Sbjct: 59  RELLDRLFEEHKIDAVIHFAGLIAVGESVQKPLKYYRNNVVGTLNLLEAMQQAGVKKFIF 118

Query: 129 TSS 131
           +SS
Sbjct: 119 SSS 121

Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 48.3 bits (116), Expect = 7e-07
 Identities = 39/147 (26%), Positives = 59/147 (40%), Gaps = 20/147 (13%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINAT---VFPGSDSSHLFA-LPGAGDANLRVFEA 66
           T  VTG  G +G  L + L +     +        P  ++  L A L   G A + V   
Sbjct: 2   TYLVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARG-AEVTVVAC 60

Query: 67  DVLDSGAVSRAVEGC-------KGVFHVASPCTLED----PVDPE--KELILPAVQGTLN 113
           DV D  AV   +          +GV H A    L D     +  E    ++ P V G  N
Sbjct: 61  DVSDRDAVRALLAEIRADGPPLRGVIHAAG--VLRDALLANMTAEDFARVLAPKVTGAWN 118

Query: 114 VLEAAKRFGVRRVVVTSSISAIVPNPG 140
           + EA +   +   V+ SSI+ ++ +PG
Sbjct: 119 LHEATRDRPLDFFVLFSSIAGVLGSPG 145

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs

 Score = 48.7 bits (116), Expect = 1e-06
 Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 10/118 (8%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           V +TG  G IG+ L++ LL+  +  +    F      HL   P     NL V E  + D 
Sbjct: 3   VLITGGAGQIGSHLIEHLLERGHQVVVIDNFATGRREHLPDHP-----NLTVVEGSIADK 57

Query: 72  GAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV 127
             V +     K   V H A+    +DP D  ++  L  V G  NV++AAK+ GV+R++
Sbjct: 58  ALVDKLFGDFKPDAVVHTAA--AYKDPDDWYED-TLTNVVGGANVVQAAKKAGVKRLI 112

Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 48.5 bits (116), Expect = 1e-06
 Identities = 50/247 (20%), Positives = 88/247 (35%), Gaps = 40/247 (16%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           T  V GA+G IG  + + L    +     +               A    + +  AD +D
Sbjct: 1   TAHVLGASGPIGREVARELRRRGWDVRLVSRSGSKL---------AWLPGVEIVAADAMD 51

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
           + +V  A  G   ++H A+P           EL  P ++   NV+ AA+  G  ++V+  
Sbjct: 52  ASSVIAAARGADVIYHCANPAYTRWE-----ELFPPLME---NVVAAAEANG-AKLVLPG 102

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
           ++    P  G    + ++T +       +RK      +   E+       K  +  + + 
Sbjct: 103 NVYMYGPQAG--SPITEDTPFQPT----TRKGRI---RAEMEERLLAAHAKGDIRALIVR 153

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP-------VKDVAKAQVLLFE 243
                GP       A  + L   L      +   + G +        + DVA+A V L E
Sbjct: 154 APDFYGP------GAINSWLGAALFAILQGKTAVFPGNLDTPHEWTYLPDVARALVTLAE 207

Query: 244 SPAASGR 250
            P A G 
Sbjct: 208 EPDAFGE 214

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 48/195 (24%), Positives = 72/195 (36%), Gaps = 33/195 (16%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + + GA GFIG  L + LL+  +     T+   +       L       + V E D+ D 
Sbjct: 1   ILILGATGFIGRALARELLEQGH---EVTLLVRNTK----RLSKEDQEPVAVVEGDLRDL 53

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS 131
            ++S AV+G   V H+A           +   +    +GT NVLEAAK  GV+  +  SS
Sbjct: 54  DSLSDAVQGVDVVIHLAG----APRDTRDFCEVDV--EGTRNVLEAAKEAGVKHFIFISS 107

Query: 132 ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFA-EKHGVDVVAIH 190
           + A         +                    P S  LA KA  E    +  +    + 
Sbjct: 108 LGA---YGDLHEETEPS----------------PSSPYLAVKAKTEAVLREASLPYTIVR 148

Query: 191 PATCLGPLMQPYLNA 205
           P    G L +   NA
Sbjct: 149 PGVIYGDLARAIANA 163

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|200381 TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase

 Score = 48.0 bits (114), Expect = 2e-06
 Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 10/134 (7%)

Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEAD 67
           +++ + +TG  G  G  +++  LD +   I   +F   +           ++ L+ +  D
Sbjct: 3   KDKILLITGGTGSFGNAVLRRFLDTDIKEIR--IFSRDEKKQDDMRKKYNNSKLKFYIGD 60

Query: 68  VLDSGAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
           V D  ++  A  G   ++H A+    P     P++  K  +L    GT NVLEAA   GV
Sbjct: 61  VRDYRSILNATRGVDFIYHAAALKQVPSCEFHPMEAVKTNVL----GTENVLEAAIANGV 116

Query: 124 RRVVVTSSISAIVP 137
           +RVV  S+  A+ P
Sbjct: 117 KRVVCLSTDKAVYP 130

The FnlA enzyme is the first step in the biosynthesis of UDP-FucNAc from UDP-GlcNAc in E. coli (along with FnlB and FnlC). The proteins identified by this model include FnlA homologs in the O-antigen clusters of O4, O25, O26, O29 (Shigella D11), O118, O145 and O172 serotype strains, all of which produce O-antigens containing FucNAc (or the further modified FucNAm). A homolog from Pseudomonas aerugiosa serotype O11, WbjB, also involved in the biosynthesis of UDP-FucNAc has been characterized and is now believed to carry out both the initial 4,6-dehydratase reaction and the subsequent epimerization of the resulting methyl group at C-5. A phylogenetic tree of related sequences shows a distinct clade of enzymes involved in the biosynthesis of UDP-QuiNAc (Qui=qinovosamine). This clade appears to be descendant from the common ancestor of the Pseudomonas and E. coli fucose-biosynthesis enzymes. It has been hypothesized that the first step in the biosynthesis of these two compounds may be the same, and thus that these enzymes all have the same function. At present, lacking sufficient confirmation of this, the current model trusted cutoff only covers the tree segment surrounding the E. coli genes. The clades containing the Pseudomonas and QuiNAc biosynthesis enzymes score above the noise cutoff. Immediately below the noise cutoff are enzymes involved in the biosynthesis of UDP-RhaNAc (Rha=rhamnose), which again may or may not produce the same product. Length = 337

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score = 47.5 bits (113), Expect = 3e-06
 Identities = 42/200 (21%), Positives = 68/200 (34%), Gaps = 30/200 (15%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFE---A 66
           +   VTGA GFIG+ L + L    +         G+D       P          E    
Sbjct: 1   QRALVTGAGGFIGSHLAERLKAEGHYVR------GADWKS----PEHMTQPTDDDEFHLV 50

Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELIL-PAVQGTLNVLEAAKRFGVRR 125
           D+ +     +A EG   VFH+A+       +     +I+        N+LEAA+  GV R
Sbjct: 51  DLREMENCLKATEGVDHVFHLAADMGGMGYIQSNHAVIMYNNTLINFNMLEAARINGVER 110

Query: 126 VVVTSS-------ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEF 178
            +  SS                 +    +E +W         +  Y   K   E+    +
Sbjct: 111 FLFASSACVYPEFKQLETTVVRLR----EEDAWPA-----EPQDAYGWEKLATERLCQHY 161

Query: 179 AEKHGVDVVAIHPATCLGPL 198
            E +G++   +      GP 
Sbjct: 162 NEDYGIETRIVRFHNIYGPR 181

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score = 46.8 bits (112), Expect = 5e-06
 Identities = 47/196 (23%), Positives = 77/196 (39%), Gaps = 40/196 (20%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            + VTG  G +G+ +V+ L    Y ++   VF  S                   E D+ D
Sbjct: 1   KILVTGHRGLVGSAIVRVLARRGYENV---VFRTSK------------------ELDLTD 39

Query: 71  SGAVSRAVEGCK--GVFHVASPC-----TLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
             AV    E  K   V H+A+        +  P D     +   +    NV+ AA RFGV
Sbjct: 40  QEAVRAFFEKEKPDYVIHLAAKVGGIVANMTYPAD----FLRDNLLINDNVIHAAHRFGV 95

Query: 124 RRVVVTSSISAIVPNPGWKGKV-FDETS-WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK 181
           +++V   S S I P+         DE+   T     +   + Y ++K    K    + ++
Sbjct: 96  KKLVFLGS-SCIYPD---LAPQPIDESDLLT--GPPEPTNEGYAIAKRAGLKLCEAYRKQ 149

Query: 182 HGVDVVAIHPATCLGP 197
           +G D +++ P    GP
Sbjct: 150 YGCDYISVMPTNLYGP 165

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 46.6 bits (111), Expect = 7e-06
 Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 14/124 (11%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           V VTGA G++G  LV  LL   +  + A V        L   P +    + V   D+ D 
Sbjct: 1   VLVTGATGYVGGRLVPRLLQEGH-QVRALV---RSPEKLADRPWSE--RVTVVRGDLEDP 54

Query: 72  GAVSRAVEGCKGVFH-VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
            ++  A+EG    ++ V S  +  D  + ++           N   AA+  GV+R++   
Sbjct: 55  ESLRAALEGIDTAYYLVHSMGSGGDFEEADRRA-------ARNFARAARAAGVKRIIYLG 107

Query: 131 SISA 134
            +  
Sbjct: 108 GLIP 111

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 46.2 bits (110), Expect = 8e-06
 Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 16/127 (12%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSG 72
           VTGA G IG+ +  TLL+             SD  +   A  GA      V   D+ D  
Sbjct: 3   VTGATGRIGSKVATTLLEAGR---PVRALVRSDERAAALAARGA-----EVVVGDLDDPA 54

Query: 73  AVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI 132
            ++ A+ G   VF +A P     P    +   + A +       A +  GV+RVV  SS+
Sbjct: 55  VLAAALAGVDAVFFLAPP----APTADARPGYVQAAE---AFASALREAGVKRVVNLSSV 107

Query: 133 SAIVPNP 139
            A   +P
Sbjct: 108 GADPESP 114

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 38/154 (24%), Positives = 61/154 (39%), Gaps = 33/154 (21%)

Query: 11  TVCVTGANGFIGT----WLVK------TLLDNNYTSINATVFPGSDSSHLFA-LPGAGDA 59
           TV +TG  G +G     WL         L+            P   ++ L A L   G A
Sbjct: 2   TVLITGGTGGLGLALARWLAAEGARHLVLVSRR--------GPAPGAAELVAELEALG-A 52

Query: 60  NLRVFEADVLDSGAVSRAVEGCK-------GVFH---VASPCTLEDPVDPE--KELILPA 107
            + V   DV D  A++  +           GV H   V     LE+ + PE  + ++ P 
Sbjct: 53  EVTVAACDVADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEE-LTPERFERVLAPK 111

Query: 108 VQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW 141
           V G  N+ E  +   +   V+ SS++ ++ +PG 
Sbjct: 112 VTGAWNLHELTRDLDLGAFVLFSSVAGVLGSPGQ 145

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase

 Score = 45.5 bits (108), Expect = 2e-05
 Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 14/140 (10%)

Query: 6   EKEEETVCVTGANGFIGTWLVKTLLDNNYTSI----NATVFPGSDSS--HLFALPGAGDA 59
           E ++ TV V GA G+IG ++V+ L+   Y  +      +   G +        LPGA   
Sbjct: 57  EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGA--- 113

Query: 60  NLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAK 119
              V   DV D+ ++ + +        V   C L       K+      Q T N L+A +
Sbjct: 114 --EVVFGDVTDADSLRKVLFSEGDPVDVVVSC-LASRTGGVKDSWKIDYQATKNSLDAGR 170

Query: 120 RFGVRRVVVTSSISAIVPNP 139
             G +  V+ S+I   V  P
Sbjct: 171 EVGAKHFVLLSAIC--VQKP 188

Length = 390

>gnl|CDD|224014 COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 9/116 (7%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS----HLFALPGAGDANLRVFEADVL 69
           +TG  G  G++L + LL+  Y  ++      S  +    HL+  P   D  L +   D+ 
Sbjct: 7   ITGITGQDGSYLAELLLEKGYE-VHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLT 65

Query: 70  DSGAVSRAVEGCKG--VFHVASPCTLEDPVD-PEKELILPAVQGTLNVLEAAKRFG 122
           DS  + R +E  +   ++++A+   +    + PE    + A+ GTL +LEA +  G
Sbjct: 66  DSSNLLRILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAI-GTLRLLEAIRILG 120

Length = 345

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 38/151 (25%), Positives = 54/151 (35%), Gaps = 18/151 (11%)

Query: 7   KEEETVCVTGANGFIGTWLVKTLLDN---NYTSINATVFPGSDSSHLFALPGAGD--ANL 61
           K      VTG  G IG  L + L          +  +  P  +      L       A +
Sbjct: 203 KPGGVYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARV 262

Query: 62  RVFEADVLDSGAVSRAVEGCK-------GVFHVA---SPCTLEDPVDPE--KELILPAVQ 109
               ADV D+ AV R +E  +       GV H A       L      E  + ++ P V 
Sbjct: 263 LYISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVLRDALLAQ-KTAEDFEAVLAPKVD 321

Query: 110 GTLNVLEAAKRFGVRRVVVTSSISAIVPNPG 140
           G LN+ +A     +   V+ SS+SA     G
Sbjct: 322 GLLNLAQALADEPLDFFVLFSSVSAFFGGAG 352

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 44.8 bits (107), Expect = 2e-05
 Identities = 40/152 (26%), Positives = 56/152 (36%), Gaps = 28/152 (18%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG---AGDANLRVFEAD 67
           T  VTGA+  IG  +   L  +    +       S+     AL     A     RV   D
Sbjct: 7   TALVTGASRGIGRAIALRLAADGAKVVIY----DSNEEAAEALAAELRAAGGEARVLVFD 62

Query: 68  VLDSGAVSRAVE-------GCKGVFHVA---SPCTLEDPVDPE--KELILPAVQGTLNVL 115
           V D  AV   +E           + + A       L   +  E    +I   + GT NV+
Sbjct: 63  VSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPR-MSEEDWDRVIDVNLTGTFNVV 121

Query: 116 EAA------KRFGVRRVVVTSSISAIVPNPGW 141
            AA       R+G  R+V  SS+S +  NPG 
Sbjct: 122 RAALPPMIKARYG--RIVNISSVSGVTGNPGQ 151

Length = 246

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 44.0 bits (105), Expect = 2e-05
 Identities = 37/151 (24%), Positives = 57/151 (37%), Gaps = 28/151 (18%)

Query: 11  TVCVTGANGFIG----TWLVKT-----LLDNNYTSINATVFPGSDSSHLFALPGAGDANL 61
           T  +TG  G +G     WL +      +L     S +    PG+    L A   A  A +
Sbjct: 2   TYLITGGLGGLGRALARWLAERGARRLVL----LSRSGPDAPGAA--ALLAELEAAGARV 55

Query: 62  RVFEADVLDSGAVSRAVEGC-------KGVFH---VASPCTLEDPVDPE--KELILPAVQ 109
            V   DV D  A++  +           GV H   V     L   + PE    ++ P   
Sbjct: 56  TVVACDVADRDALAAVLAAIPAVEGPLTGVIHAAGVLDDGVLAS-LTPERFAAVLAPKAA 114

Query: 110 GTLNVLEAAKRFGVRRVVVTSSISAIVPNPG 140
           G  N+ E      +   V+ SSI+ ++ +PG
Sbjct: 115 GAWNLHELTADLPLDFFVLFSSIAGVLGSPG 145

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 44.5 bits (106), Expect = 2e-05
 Identities = 57/261 (21%), Positives = 88/261 (33%), Gaps = 57/261 (21%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
              VTGA   IG  +   L  +    I   +     ++    +  AG    R  + DV D
Sbjct: 8   VALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGG-KARARQVDVRD 66

Query: 71  SGAVSRAVE-------GCKGVFH---VASPCTLEDPVDPE--KELILPAVQGTLNVLEAA 118
             A+  AV            +     +       + +D E  + +I   + GT  + +AA
Sbjct: 67  RAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAE-MDDEQWERVIDVNLTGTFLLTQAA 125

Query: 119 ----KRFGVRRVVVTSSISA-IVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEK 173
                R G  R+V+TSS++   V  PG               Y  S  K   V  T A  
Sbjct: 126 LPALIRAGGGRIVLTSSVAGPRVGYPGLAH------------YAAS--KAGLVGFTRA-- 169

Query: 174 AAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK- 232
            A E A    + V ++HP     P+     +A     + +              A+P+  
Sbjct: 170 LALELAA-RNITVNSVHPGGVDTPMAGNLGDAQ--WAEAIAA------------AIPLGR 214

Query: 233 -----DVAKAQVLLFESPAAS 248
                D+A A VL   S  A 
Sbjct: 215 LGEPEDIAAA-VLFLASDEAR 234

Length = 251

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 49/202 (24%), Positives = 73/202 (36%), Gaps = 47/202 (23%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA 73
           +TGA+  IG  LV+ LL     ++ AT    S ++ L AL GA  + L + E DV D  A
Sbjct: 3   ITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAAL-GASHSRLHILELDVTDEIA 61

Query: 74  VS----RAVEGCKG---VFH---VASPCTLEDPVDPEKELILPAVQ--GTLNVLEAAK-- 119
            S        G  G   + +   +         VD E  L +  V   G L + +A    
Sbjct: 62  ESAEAVAERLGDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLTQAFLPL 121

Query: 120 -RFGVRRVVVT-----SSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT---- 169
              G R  ++       SI        +                      Y  SK     
Sbjct: 122 LLKGARAKIINISSRVGSIGDNTSGGWYS---------------------YRASKAALNM 160

Query: 170 LAEKAAWEFAEKHGVDVVAIHP 191
           L +  A E  ++ G+ VV++HP
Sbjct: 161 LTKSLAVEL-KRDGITVVSLHP 181

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 48/198 (24%), Positives = 81/198 (40%), Gaps = 34/198 (17%)

Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEAD 67
           +++TV VTGAN  IG   V++LL +    + A V     ++HL A  G     LR+   D
Sbjct: 2   KDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKYGDKVVPLRL---D 58

Query: 68  VLDSGAVSRAVEGCK---------GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA- 117
           V D  ++  A    K         GV   A+          ++E+ +  V G L + +A 
Sbjct: 59  VTDPESIKAAAAQAKDVDVVINNAGVLKPATLLEEGALEALKQEMDV-NVFGLLRLAQAF 117

Query: 118 ---AKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKA 174
               K  G   +V  +S++++   P                Y  S+   Y +++ L    
Sbjct: 118 APVLKANGGGAIVNLNSVASLKNFPAMGT------------YSASKSAAYSLTQGLRA-- 163

Query: 175 AWEFAEKHGVDVVAIHPA 192
             E A + G  V+++HP 
Sbjct: 164 --ELAAQ-GTLVLSVHPG 178

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|187580 cd05272, TDH_SDR_e, L-threonine dehydrogenase, extended (e) SDRs

 Score = 44.6 bits (106), Expect = 3e-05
 Identities = 49/183 (26%), Positives = 69/183 (37%), Gaps = 31/183 (16%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFE-ADVLD 70
           + +TG  G IG+ L K LL   Y   N      SD       P A       FE  DVLD
Sbjct: 2   ILITGGLGQIGSELAK-LLRKRYGKDNVIA---SD----IRKPPAHVVLSGPFEYLDVLD 53

Query: 71  SGAVSRAVE--GCKGVFHVAS--PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
             ++   V       + H+A+      E       ++    + G  NVLE A+   + R+
Sbjct: 54  FKSLEEIVVNHKITWIIHLAALLSAVGEKNPPLAWDV---NMNGLHNVLELAREHNL-RI 109

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDL--EYCKSR-KKWYPVSKTLAEKAAWEFAEKHG 183
            V S+I A           F  T+  +   +    R +  Y VSK  AE     +  K G
Sbjct: 110 FVPSTIGA-----------FGPTTPRNNTPDDTIQRPRTIYGVSKVAAELLGEYYHHKFG 158

Query: 184 VDV 186
           VD 
Sbjct: 159 VDF 161

This subgroup contains members identified as L-threonine dehydrogenase (TDH). TDH catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. This group is distinct from TDHs that are members of the medium chain dehydrogenase/reductase family. This group has the NAD-binding motif and active site tetrad of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 308

>gnl|CDD|187672 cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid dehydrogenase (3b-HSD)-like, subgroup1, extended (e) SDRs

 Score = 44.4 bits (105), Expect = 4e-05
 Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 11/126 (8%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           +V +TG  G+ G  L   L  +    I   +           LP      ++  +ADV D
Sbjct: 1   SVLITGGGGYFGFRLGCALAKSGVHVILFDI-----RRPQQELP----EGIKFIQADVRD 51

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPA-VQGTLNVLEAAKRFGVRRVVVT 129
              + +AV G   VFH+AS   +       +ELI    V+GT N+++   R  V R++ T
Sbjct: 52  LSQLEKAVAGVDCVFHIAS-YGMSGREQLNRELIEEINVRGTENIIQVCVRRRVPRLIYT 110

Query: 130 SSISAI 135
           S+ + I
Sbjct: 111 STFNVI 116

An uncharacterized subgroup of the 3b-HSD-like extended-SDR family. Proteins in this subgroup have the characteristic active site tetrad and NAD(P)-binding motif of extended-SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 339

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 42.9 bits (101), Expect = 9e-05
 Identities = 44/209 (21%), Positives = 71/209 (33%), Gaps = 43/209 (20%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           V +TG  G +G      L       +       +  S    LPG     LR+   D++D 
Sbjct: 10  VAITGGFGGLGRATAAWLA-ARGARVALIGRGAAPLSQ--TLPGVPADALRIGGIDLVDP 66

Query: 72  GAVSRAVE-------GCKGVFHVA---SPCTLEDPVDPEKELILPA-VQGTLNVLEAA-- 118
            A  RAV+           + ++A      T+ D      + +    V+ TLN  +AA  
Sbjct: 67  QAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALP 126

Query: 119 --KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT----LAE 172
                G  R+V   + +A+   PG                       Y  +K     L E
Sbjct: 127 ALTASGGGRIVNIGAGAALKAGPGMGA--------------------YAAAKAGVARLTE 166

Query: 173 KAAWEFAEKHGVDVVAIHPATCLGPLMQP 201
             A E  ++ G+ V A+ P+    P  + 
Sbjct: 167 ALAAELLDR-GITVNAVLPSIIDTPPNRA 194

Length = 239

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 2/70 (2%)

Query: 10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH-LFALPGAGDANLRVFEADV 68
          +   VTGA   IG+ + + LL++ Y  I AT F G+D +   F   G  +  +R+ E DV
Sbjct: 3  KIALVTGAKRGIGSAIARELLNDGYRVI-ATYFSGNDCAKDWFEEYGFTEDQVRLKELDV 61

Query: 69 LDSGAVSRAV 78
           D+   + A+
Sbjct: 62 TDTEECAEAL 71

Length = 245

>gnl|CDD|132628 TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehydratase

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 39/136 (28%), Positives = 56/136 (41%), Gaps = 19/136 (13%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFP-----GSDSSHLFALPGAGDANLRVFE 65
           ++ +TG  G  G   +  LL  NY      ++        +    F  P      LR F 
Sbjct: 6   SILITGGTGSFGKAFISRLL-ENYNPKKIIIYSRDELKQWEMQQKFPAP-----CLRFFI 59

Query: 66  ADVLDSGAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRF 121
            DV D   ++RA+ G   V H A+    P    +P     E I   + G  NV++AA   
Sbjct: 60  GDVRDKERLTRALRGVDYVVHAAALKQVPAAEYNPF----ECIRTNINGAQNVIDAAIDN 115

Query: 122 GVRRVVVTSSISAIVP 137
           GV+RVV  S+  A  P
Sbjct: 116 GVKRVVALSTDKAANP 131

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. Length = 324

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 42.6 bits (101), Expect = 2e-04
 Identities = 37/134 (27%), Positives = 54/134 (40%), Gaps = 23/134 (17%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTS-INATVFPGS-----------DSSHLFALPG-AGDAN 60
           VTG  GFIG  LV  LLD    + ++  V   S            +  +  L G   +  
Sbjct: 5   VTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPG 64

Query: 61  LRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKR 120
           L + EAD+ + G +         V H+A+   + D    E+      V GT NV+E A+R
Sbjct: 65  LGLSEADIAELGDIDH-------VVHLAA---IYDLTADEEAQRAANVDGTRNVVELAER 114

Query: 121 FGVRRVVVTSSISA 134
                    SSI+ 
Sbjct: 115 LQAATFHHVSSIAV 128

Length = 657

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 42.1 bits (99), Expect = 2e-04
 Identities = 56/267 (20%), Positives = 87/267 (32%), Gaps = 52/267 (19%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTS-INATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDS 71
           VTGA+  IG  + + L        + A       +  L A +  AG        ADV D 
Sbjct: 10  VTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDD 69

Query: 72  -GAVSRAVEGCK-------------GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA 117
             +V   V   +             G+    +P       D ++ + +  +   L    A
Sbjct: 70  EESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAA 129

Query: 118 AKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK----TLAEK 173
                 +R+V  SS++ +   PG                       Y  SK     L + 
Sbjct: 130 LPLMKKQRIVNISSVAGLGGPPGQAA--------------------YAASKAALIGLTKA 169

Query: 174 AAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG-AVPVK 232
            A E A   G+ V A+ P     P+     +A    L++L            LG     +
Sbjct: 170 LALELA-PRGIRVNAVAPGYIDTPMTAALESAELEALKRLAAR-------IPLGRLGTPE 221

Query: 233 DVAKAQVLLFESPAAS---GRYLCTNG 256
           +VA A   L    AAS   G+ L  +G
Sbjct: 222 EVAAAVAFLASDEAASYITGQTLPVDG 248

Length = 251

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 36/186 (19%), Positives = 60/186 (32%), Gaps = 37/186 (19%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVF----PGSDSS-----------HLFALPGAGD 58
           +TGA GF+G  L++ LL    ++    ++         S           +         
Sbjct: 1   LTGATGFLGKVLLEKLLR---STPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLKAL 57

Query: 59  ANLRVFEADV------LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTL 112
             +     D+      L         E    + H A+       V+P  +L    V GT 
Sbjct: 58  ERIIPVAGDLSEPNLGLSDEDFQELAEEVDVIIHNAATVNF---VEPYSDLRATNVLGTR 114

Query: 113 NVLEAAKRFGVRRVV-VTSSISAIVPNPGWKGKVFDETSWTDLEYC-KSRKKW---YPVS 167
            VL  AK+        V+++        G +G + +E  +   E            Y  S
Sbjct: 115 EVLRLAKQMKKLPFHHVSTAYVN-----GERGGLLEEKPYKLDEDEPALLGGLPNGYTQS 169

Query: 168 KTLAEK 173
           K LAE+
Sbjct: 170 KWLAEQ 175

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|235630 PRK05865, PRK05865, hypothetical protein; Provisional

 Score = 42.0 bits (98), Expect = 3e-04
 Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 19/120 (15%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTGA+G +G  L   LL   +  +      G       + P + D       AD+ D+
Sbjct: 3   IAVTGASGVLGRGLTARLLSQGHEVV------GIARHRPDSWPSSAD----FIAADIRDA 52

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS 131
            AV  A+ G   V H A              +    + GT NVL+A    G  R+V TSS
Sbjct: 53  TAVESAMTGADVVAHCAW------VRGRNDHI---NIDGTANVLKAMAETGTGRIVFTSS 103

Length = 854

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 41.4 bits (98), Expect = 3e-04
 Identities = 54/184 (29%), Positives = 78/184 (42%), Gaps = 25/184 (13%)

Query: 14  VTGANGFIGTWLVKTLLDN--NYTSINA-TVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           VTG  GFIG+  V+ LL+   +Y  IN   +    +  +L  +  +     R  + D+ D
Sbjct: 5   VTGGAGFIGSNFVRYLLNKYPDYKIINLDKLTYAGNLENLEDV--SSSPRYRFVKGDICD 62

Query: 71  SGAVSRAVEGCK--GVFHVASPCTLEDPVD-----PEKELILPAVQGTLNVLEAAKRFGV 123
           +  V R  E  K   V H A+    E  VD     PE   I   V GT  +LEAA+++GV
Sbjct: 63  AELVDRLFEEEKIDAVIHFAA----ESHVDRSISDPE-PFIRTNVLGTYTLLEAARKYGV 117

Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
           +R V  S+    V         F ETS        +    Y  SK  A+     +   +G
Sbjct: 118 KRFVHISTDE--VYGDLLDDGEFTETS----PLAPTSP--YSASKAAADLLVRAYHRTYG 169

Query: 184 VDVV 187
           + VV
Sbjct: 170 LPVV 173

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs

 Score = 41.0 bits (97), Expect = 4e-04
 Identities = 31/135 (22%), Positives = 55/135 (40%), Gaps = 18/135 (13%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS----HLFALPGAGDANLRVFEA 66
              +TG  G  G++L + LL+  Y          S ++    HL+         + +   
Sbjct: 1   RALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTDRIDHLY----INKDRITLHYG 56

Query: 67  DVLDSGAVSRAVEGCKG--VFHVA----SPCTLEDPVDPEKELILPAVQGTLNVLEAAKR 120
           D+ DS ++ RA+E  +   ++H+A       + +DP             GTLN+LEA + 
Sbjct: 57  DLTDSSSLRRAIEKVRPDEIYHLAAQSHVKVSFDDPE----YTAEVNAVGTLNLLEAIRI 112

Query: 121 FGVRRVVVTSSISAI 135
            G+      +S S  
Sbjct: 113 LGLDARFYQASSSEE 127

GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|233954 TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydratase

 Score = 41.1 bits (97), Expect = 5e-04
 Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 22/129 (17%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVF-----PGSDSSHLFALPGAGDANLRVFE 65
            V VTG  GF G+WL   L       + A V+     P +  +    L  A         
Sbjct: 6   KVLVTGHTGFKGSWLSLWL-----LELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHF-- 58

Query: 66  ADVLDSGAVSRAVEGCKG--VFHVAS-PC---TLEDPVDPEKELILPAVQGTLNVLEAAK 119
            D+ D+  + +A+   K   VFH+A+ P    +  DP+    E     V GT+N+LEA +
Sbjct: 59  GDIRDAAKLRKAIAEFKPEIVFHLAAQPLVRKSYADPL----ETFETNVMGTVNLLEAIR 114

Query: 120 RFGVRRVVV 128
             G  + VV
Sbjct: 115 AIGSVKAVV 123

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 349

>gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 40.8 bits (96), Expect = 5e-04
 Identities = 51/203 (25%), Positives = 69/203 (33%), Gaps = 20/203 (9%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDA----------N 60
            V +TGA GF+G +L+  LLD +   +   V   SD + L  L    D            
Sbjct: 2   NVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADR 61

Query: 61  LRVFEADV------LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNV 114
           + V   D+      L         E    + H A+   L + V P  EL    V GT  V
Sbjct: 62  VEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAA---LVNHVFPYSELRGANVLGTAEV 118

Query: 115 LEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKA 174
           L  A     + +   SSIS           V  +         +     Y  SK +AEK 
Sbjct: 119 LRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKL 178

Query: 175 AWEFAEKHGVDVVAIHPATCLGP 197
             E A   G+ V    P    G 
Sbjct: 179 VRE-AGDRGLPVTIFRPGYITGD 200

Length = 382

>gnl|CDD|165812 PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase

 Score = 40.8 bits (95), Expect = 6e-04
 Identities = 55/201 (27%), Positives = 83/201 (41%), Gaps = 38/201 (18%)

Query: 12  VCVTGANGFIGTWLVKTLL---------DNNYTSINATVFPGSDSSHLFALPGAGDANLR 62
           + VTG  GF+G+ LV  L+         DN +T     +       HLF     G+    
Sbjct: 123 IVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLV------HLF-----GNPRFE 171

Query: 63  VFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPV----DPEKELILPAVQGTLNVLEAA 118
           +   DV++   +         ++H+A P +   PV    +P K  I   V GTLN+L  A
Sbjct: 172 LIRHDVVEPILLE-----VDQIYHLACPAS---PVHYKYNPVKT-IKTNVMGTLNMLGLA 222

Query: 119 KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEF 178
           KR G R ++  +S S +  +P    +   ET W ++     R   Y   K  AE  A ++
Sbjct: 223 KRVGARFLL--TSTSEVYGDPLEHPQ--KETYWGNVNPIGER-SCYDEGKRTAETLAMDY 277

Query: 179 AEKHGVDVVAIHPATCLGPLM 199
               GV+V         GP M
Sbjct: 278 HRGAGVEVRIARIFNTYGPRM 298

Length = 436

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score = 40.0 bits (94), Expect = 7e-04
 Identities = 45/215 (20%), Positives = 69/215 (32%), Gaps = 54/215 (25%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNY----TSINATVFPGSDSSHLFALPGAGDANLRVFEAD 67
             VTGA+  IG  + + L            N       ++    A   A   N    +AD
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNE------EALAELAAIEALGGNAVAVQAD 54

Query: 68  VLDSGAVSRAVEGCK-------GVFH---VASPCTLEDPVDPEKEL-------ILPAVQG 110
           V D   V   VE           + +   +A P  LE+    +++        +      
Sbjct: 55  VSDEEDVEALVEEALEEFGRLDILVNNAGIARPGPLEE--LTDEDWDRVLDVNLTGVFLL 112

Query: 111 TLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK-- 168
           T   L   K+ G  R+V  SS++ + P PG               Y          SK  
Sbjct: 113 TRAALPHMKKQGGGRIVNISSVAGLRPLPGQ------------AAYA--------ASKAA 152

Query: 169 --TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP 201
              L    A E A  +G+ V A+ P     P++  
Sbjct: 153 LEGLTRSLALELA-PYGIRVNAVAPGLVDTPMLAK 186

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|187651 cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptional regulator), HSCARG (an NADPH sensor), and triphenylmethane reductase (TMR) like proteins, atypical (a) SDRs

 Score = 39.5 bits (92), Expect = 9e-04
 Identities = 49/235 (20%), Positives = 77/235 (32%), Gaps = 30/235 (12%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTGA G  G  +++ LL    + + A V     ++ L A  G       V + D    
Sbjct: 1   IAVTGATGQQGGSVIRHLLAKGASQVRAVVRNVEKAATL-ADQGV-----EVRQGDYNQP 54

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS 131
             + +A  G   +F +        P       I    QG  NV +AA+R GV+ +  T  
Sbjct: 55  ELLQKAFAGASKLFIITG------PHYDNTLEI---KQGK-NVADAARRAGVKHIYSTGY 104

Query: 132 ISAIVPN-PGWKGKVFDETSWTD--LEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVA 188
             A     P    K+  E +     + Y   R   Y       E    E          A
Sbjct: 105 AFAEESAIPLAHVKLAVEYAIRTTGIPYTFLRNGLY------TENFVSEGLPAADTGSGA 158

Query: 189 IHPATCLGPLMQPYLNAS---CAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVL 240
           I      GP+  P +  +    A  Q L +   + +  + +          A  L
Sbjct: 159 IVLPAGDGPV--PSVTRNDLGPAAAQLLKEEGHEGKTINLVSNCRWTPDELAAAL 211

Atypical SDRs belonging to this subgroup include NmrA, HSCARG, and TMR, these proteins bind NAD(P) but they lack the usual catalytic residues of the SDRs. Atypical SDRs are distinct from classical SDRs. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. TMR, an NADP-binding protein, lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 224

>gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs

 Score = 40.0 bits (94), Expect = 0.001
 Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 17/134 (12%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYT-----SINATVFPGSDSSHLFALPGAGDANLRVFE 65
            + VTGA GFIG  + K LL+         ++N         + L  L  +G    +  +
Sbjct: 2   KILVTGAAGFIGFHVAKRLLERGDEVVGIDNLNDYYDVRLKEARLELLGKSGGF--KFVK 59

Query: 66  ADVLDSGAVSRAVEGCK--GVFHVASPC----TLEDPVDPEKELILPAVQGTLNVLEAAK 119
            D+ D  A+ R  +  +   V H+A+      +LE+P       +   + G LN+LE  +
Sbjct: 60  GDLEDREALRRLFKDHEFDAVIHLAAQAGVRYSLENP----HAYVDSNIVGFLNLLELCR 115

Query: 120 RFGVRRVVVTSSIS 133
            FGV+ +V  SS S
Sbjct: 116 HFGVKHLVYASSSS 129

This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332

>gnl|CDD|177856 PLN02206, PLN02206, UDP-glucuronate decarboxylase

 Score = 40.0 bits (93), Expect = 0.001
 Identities = 56/201 (27%), Positives = 82/201 (40%), Gaps = 38/201 (18%)

Query: 12  VCVTGANGFIGTWLVKTLL---------DNNYTSINATVFPGSDSSHLFALPGAGDANLR 62
           V VTG  GF+G+ LV  L+         DN +T     V       H F+ P     N  
Sbjct: 122 VVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVM------HHFSNP-----NFE 170

Query: 63  VFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPV----DPEKELILPAVQGTLNVLEAA 118
           +   DV++   +         ++H+A P +   PV    +P K  I   V GTLN+L  A
Sbjct: 171 LIRHDVVEPILLE-----VDQIYHLACPAS---PVHYKFNPVKT-IKTNVVGTLNMLGLA 221

Query: 119 KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEF 178
           KR G R ++  +S S +  +P    +V  ET W ++     R   Y   K  AE    ++
Sbjct: 222 KRVGARFLL--TSTSEVYGDPLQHPQV--ETYWGNVNPIGVR-SCYDEGKRTAETLTMDY 276

Query: 179 AEKHGVDVVAIHPATCLGPLM 199
                V+V         GP M
Sbjct: 277 HRGANVEVRIARIFNTYGPRM 297

Length = 442

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 39.6 bits (93), Expect = 0.001
 Identities = 59/267 (22%), Positives = 89/267 (33%), Gaps = 40/267 (14%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           V VTGA GFIG+ +V+ L+   +  +          +      GA     +V   D+ D 
Sbjct: 3   VFVTGATGFIGSAVVRELVAAGHEVVGLARSD--AGAAKLEAAGA-----QVHRGDLEDL 55

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS 131
             + +A      V H+A      D      E+   A++     L        + ++ TS 
Sbjct: 56  DILRKAAAEADAVIHLAFTHDF-DNFAQACEVDRRAIEALGEALRGTG----KPLIYTSG 110

Query: 132 ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV-VAIH 190
           I  + P         +E      +          VS    E AA E AE+ GV   V   
Sbjct: 111 IWLLGP-----TGGQEEDEEAPDD--PPTPAARAVS----EAAALELAER-GVRASVVRL 158

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY------HWLGAVPVKDVAKAQVLLFES 244
           P    G     ++    A+ ++     K    Y       W  AV   D A+   L  E 
Sbjct: 159 PPVVHGRGDHGFVPMLIAIARE-----KGVSAYVGDGKNRW-PAVHRDDAARLYRLALEK 212

Query: 245 PAASGRYLCT--NGIYQFGDFAERVSK 269
             A   Y      GI    D AE + +
Sbjct: 213 GKAGSVYHAVAEEGI-PVKDIAEAIGR 238

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase

 Score = 39.6 bits (93), Expect = 0.001
 Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 11/135 (8%)

Query: 5   AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS------HLFALPGAGD 58
                 T+ VTG  G+IG+  V  LL   Y      V    D+S       +  L G   
Sbjct: 1   MSLMGRTILVTGGAGYIGSHTVLQLLLAGYK---VVVIDNLDNSSEEALRRVKELAGDLG 57

Query: 59  ANLRVFEADVLDSGAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLE 116
            NL   + D+ D  A+ +     +   V H A    + + V          + GT+N+LE
Sbjct: 58  DNLVFHKVDLRDKEALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLE 117

Query: 117 AAKRFGVRRVVVTSS 131
              + G +++V +SS
Sbjct: 118 VMAKHGCKKLVFSSS 132

Length = 352

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 12/93 (12%)

Query: 8  EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA-----GDANLR 62
          + +T+ +TGA G IG+ LVK +L+     I A +    D   L  L  +         L 
Sbjct: 3  KGKTILITGAGGLIGSALVKAILEAGGIVIAADI----DKEALNELLESLGKEFKSKKLS 58

Query: 63 VFEADVLDSGAVSRA---VEGCKGVFHVASPCT 92
          + E D+ D  ++           G    A  C 
Sbjct: 59 LVELDITDQESLEEFLSKSAEKYGKIDGAVNCA 91

Length = 256

>gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain

 Score = 38.5 bits (90), Expect = 0.003
 Identities = 62/264 (23%), Positives = 87/264 (32%), Gaps = 36/264 (13%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDA---------- 59
           TV +TGA GF+G +L++ LL  +    +   V   S+   +  L  A  +          
Sbjct: 1   TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWHEDLAR 60

Query: 60  -NLRVFEADV------LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTL 112
             + V   D+      L      R  E    + H  +   L + V P  EL    V GT 
Sbjct: 61  ERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGA---LVNWVYPYSELRGANVLGTR 117

Query: 113 NVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAE 172
            VL  A     + +   S+IS             D+ + T           Y  SK +AE
Sbjct: 118 EVLRLAASGRAKPLHYVSTISVGAAIDL-STVTEDDATVTPPPGLAGG---YAQSKWVAE 173

Query: 173 KAAWEFAEKHGVDVVAIHPATCLGP------LMQPYL-NASCAVLQQLLQGSKDTQEYHW 225
               E A   G+ V  + P   LG            L       L               
Sbjct: 174 LLVRE-ASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPQSPELTEDL 232

Query: 226 LGAVPVKDVAKAQVLLFESPAASG 249
               PV  VA+A V+L   PAAS 
Sbjct: 233 ---TPVDFVARAIVVLSSRPAASA 253

This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 38.5 bits (90), Expect = 0.003
 Identities = 36/150 (24%), Positives = 55/150 (36%), Gaps = 28/150 (18%)

Query: 11  TVCVTGANGFIG----TWLVKT-----LLDNNYTSINATVFPGSDSSHLFALPGAGDANL 61
           T  +TG  G +G     WL        +L     S      P   ++   AL  AG A +
Sbjct: 152 TYLITGGLGGLGLLVARWLAARGARHLVL----LSRRG---PAPRAAARAALLRAGGARV 204

Query: 62  RVFEADVLDSGAVSRAVE------GCKGVFH---VASPCTLEDPVDPEK--ELILPAVQG 110
            V   DV D  A++  +          GV H   V     L +   P     ++   V G
Sbjct: 205 SVVRCDVTDPAALAALLAELAAGGPLAGVIHAAGVLRDALLAEL-TPAAFAAVLAAKVAG 263

Query: 111 TLNVLEAAKRFGVRRVVVTSSISAIVPNPG 140
            LN+ E      +   V+ SS++A++   G
Sbjct: 264 ALNLHELTPDLPLDFFVLFSSVAALLGGAG 293

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|178298 PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase

 Score = 38.3 bits (89), Expect = 0.003
 Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 18/126 (14%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINA-----TVFPGSDSSHLFALPGAGDANLRVFEA 66
           +C+TGA GFI + + + L    +  I +              H F L      +LRV E 
Sbjct: 24  ICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHL-----VDLRVMEN 78

Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELIL-PAVQGTLNVLEAAKRFGVRR 125
            +       +  +G   VF++A+       +     +I+      + N+LEAA+  GV+R
Sbjct: 79  CL-------KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKR 131

Query: 126 VVVTSS 131
               SS
Sbjct: 132 FFYASS 137

Length = 370

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	307
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	100.0
PLN02214	342	cinnamoyl-CoA reductase	100.0
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
PLN00198	338	anthocyanidin reductase; Provisional	100.0
PLN02583	297	cinnamoyl-CoA reductase	100.0
PLN02650	351	dihydroflavonol-4-reductase	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
PLN02686	367	cinnamoyl-CoA reductase	100.0
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
PLN02896	353	cinnamyl-alcohol dehydrogenase	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	100.0
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	100.0
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	100.0
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	100.0
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	100.0
PLN02653	340	GDP-mannose 4,6-dehydratase	100.0
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	100.0
PLN02240	352	UDP-glucose 4-epimerase	100.0
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	100.0
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	100.0
PRK10675	338	UDP-galactose-4-epimerase; Provisional	100.0
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	100.0
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	100.0
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	100.0
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	100.0
CHL00194	317	ycf39 Ycf39; Provisional	100.0
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	100.0
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	100.0
PLN02996	491	fatty acyl-CoA reductase	100.0
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	100.0
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.98
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.98
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.98
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.98
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.97
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.97
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.97
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.97
PRK07201	657	short chain dehydrogenase; Provisional	99.97
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.96
PLN02778	298	3,5-epimerase/4-reductase	99.96
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.96
PLN00016	378	RNA-binding protein; Provisional	99.96
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.96
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.95
PLN02503	605	fatty acyl-CoA reductase 2	99.95
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.95
PRK06482	276	short chain dehydrogenase; Provisional	99.95
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.95
PRK05865	854	hypothetical protein; Provisional	99.95
PRK08263	275	short chain dehydrogenase; Provisional	99.95
PRK06180	277	short chain dehydrogenase; Provisional	99.94
PRK05876	275	short chain dehydrogenase; Provisional	99.94
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.94
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.94
PRK06182	273	short chain dehydrogenase; Validated	99.94
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.93
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.93
PRK12320	699	hypothetical protein; Provisional	99.93
PRK07775	274	short chain dehydrogenase; Provisional	99.93
PRK07060	245	short chain dehydrogenase; Provisional	99.93
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK07067	257	sorbitol dehydrogenase; Provisional	99.93
PRK06138	252	short chain dehydrogenase; Provisional	99.93
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.93
PRK07074	257	short chain dehydrogenase; Provisional	99.93
PRK06914	280	short chain dehydrogenase; Provisional	99.93
PRK06179	270	short chain dehydrogenase; Provisional	99.93
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.93
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.93
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.93
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.92
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.92
PRK09135	249	pteridine reductase; Provisional	99.92
PRK05993	277	short chain dehydrogenase; Provisional	99.92
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.92
PRK07890	258	short chain dehydrogenase; Provisional	99.92
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.92
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.92
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.92
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.92
PRK07774	250	short chain dehydrogenase; Provisional	99.92
PRK12746	254	short chain dehydrogenase; Provisional	99.92
PRK06500	249	short chain dehydrogenase; Provisional	99.92
PRK08265	261	short chain dehydrogenase; Provisional	99.92
PRK06841	255	short chain dehydrogenase; Provisional	99.92
PRK06194	287	hypothetical protein; Provisional	99.92
PRK07478	254	short chain dehydrogenase; Provisional	99.92
PRK07576	264	short chain dehydrogenase; Provisional	99.92
PRK07806	248	short chain dehydrogenase; Provisional	99.92
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.92
PRK05875	276	short chain dehydrogenase; Provisional	99.92
PRK07856	252	short chain dehydrogenase; Provisional	99.92
PRK06128	300	oxidoreductase; Provisional	99.92
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PLN03209	576	translocon at the inner envelope of chloroplast su	99.92
PRK07063	260	short chain dehydrogenase; Provisional	99.92
PRK05717	255	oxidoreductase; Validated	99.92
PRK12829	264	short chain dehydrogenase; Provisional	99.92
PRK07985	294	oxidoreductase; Provisional	99.92
PRK07035	252	short chain dehydrogenase; Provisional	99.92
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.92
PRK06398	258	aldose dehydrogenase; Validated	99.92
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.92
PLN02253	280	xanthoxin dehydrogenase	99.92
PRK12939	250	short chain dehydrogenase; Provisional	99.92
PRK08628	258	short chain dehydrogenase; Provisional	99.92
PRK12828	239	short chain dehydrogenase; Provisional	99.92
PLN02260	668	probable rhamnose biosynthetic enzyme	99.92
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.92
PRK12827	249	short chain dehydrogenase; Provisional	99.91
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.91
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.91
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK08589	272	short chain dehydrogenase; Validated	99.91
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.91
PRK07024	257	short chain dehydrogenase; Provisional	99.91
PRK06172	253	short chain dehydrogenase; Provisional	99.91
PRK09134	258	short chain dehydrogenase; Provisional	99.91
PRK06114	254	short chain dehydrogenase; Provisional	99.91
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK08226	263	short chain dehydrogenase; Provisional	99.91
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK05867	253	short chain dehydrogenase; Provisional	99.91
PRK07825	273	short chain dehydrogenase; Provisional	99.91
PRK06523	260	short chain dehydrogenase; Provisional	99.91
PRK08643	256	acetoin reductase; Validated	99.91
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.91
PRK06701	290	short chain dehydrogenase; Provisional	99.91
PRK07814	263	short chain dehydrogenase; Provisional	99.91
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.91
PRK10538	248	malonic semialdehyde reductase; Provisional	99.91
PRK06101	240	short chain dehydrogenase; Provisional	99.91
PRK05650	270	short chain dehydrogenase; Provisional	99.91
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.91
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.91
PRK09291	257	short chain dehydrogenase; Provisional	99.91
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK09186	256	flagellin modification protein A; Provisional	99.91
PRK07454	241	short chain dehydrogenase; Provisional	99.91
PRK12747	252	short chain dehydrogenase; Provisional	99.91
PRK08339	263	short chain dehydrogenase; Provisional	99.91
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.9
PRK12742	237	oxidoreductase; Provisional	99.9
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.9
PRK05693	274	short chain dehydrogenase; Provisional	99.9
PRK06139	330	short chain dehydrogenase; Provisional	99.9
PRK08264	238	short chain dehydrogenase; Validated	99.9
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.9
PRK06181	263	short chain dehydrogenase; Provisional	99.9
PRK05872	296	short chain dehydrogenase; Provisional	99.9
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.9
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.9
PRK08267	260	short chain dehydrogenase; Provisional	99.9
PRK07109	334	short chain dehydrogenase; Provisional	99.9
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.9
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.9
PRK06949	258	short chain dehydrogenase; Provisional	99.9
PRK09242	257	tropinone reductase; Provisional	99.9
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.9
PRK06123	248	short chain dehydrogenase; Provisional	99.9
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.9
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.9
PRK06197	306	short chain dehydrogenase; Provisional	99.9
PRK08219	227	short chain dehydrogenase; Provisional	99.9
PRK05866	293	short chain dehydrogenase; Provisional	99.9
PRK07677	252	short chain dehydrogenase; Provisional	99.9
PRK08017	256	oxidoreductase; Provisional	99.9
PRK12937	245	short chain dehydrogenase; Provisional	99.9
PRK07577	234	short chain dehydrogenase; Provisional	99.9
PRK06196	315	oxidoreductase; Provisional	99.89
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.89
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK07326	237	short chain dehydrogenase; Provisional	99.89
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.89
PRK12743	256	oxidoreductase; Provisional	99.89
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.89
KOG2774	366	consensus NAD dependent epimerase [General functio	99.89
PRK06483	236	dihydromonapterin reductase; Provisional	99.89
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.89
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.89
PRK06057	255	short chain dehydrogenase; Provisional	99.89
PRK07904	253	short chain dehydrogenase; Provisional	99.89
PRK08278	273	short chain dehydrogenase; Provisional	99.89
PRK07041	230	short chain dehydrogenase; Provisional	99.89
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.89
PRK07102	243	short chain dehydrogenase; Provisional	99.89
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.89
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.89
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.89
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK06924	251	short chain dehydrogenase; Provisional	99.89
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.89
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.89
PRK06198	260	short chain dehydrogenase; Provisional	99.89
PRK08251	248	short chain dehydrogenase; Provisional	99.89
PRK06484	520	short chain dehydrogenase; Validated	99.88
PRK08703	239	short chain dehydrogenase; Provisional	99.88
PRK07791	286	short chain dehydrogenase; Provisional	99.88
PRK12744	257	short chain dehydrogenase; Provisional	99.88
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.88
PRK08324	681	short chain dehydrogenase; Validated	99.88
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.88
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.88
PRK09072	263	short chain dehydrogenase; Provisional	99.88
PRK07062	265	short chain dehydrogenase; Provisional	99.88
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.88
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.88
PRK07831	262	short chain dehydrogenase; Provisional	99.88
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.88
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.88
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.88
PRK07069	251	short chain dehydrogenase; Validated	99.88
PRK07023	243	short chain dehydrogenase; Provisional	99.88
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.87
PRK05854	313	short chain dehydrogenase; Provisional	99.87
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.87
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.87
PRK06125	259	short chain dehydrogenase; Provisional	99.87
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.87
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.87
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.87
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.87
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.86
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.86
PRK06940	275	short chain dehydrogenase; Provisional	99.86
PRK07578	199	short chain dehydrogenase; Provisional	99.86
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.86
PRK07832	272	short chain dehydrogenase; Provisional	99.86
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK06953	222	short chain dehydrogenase; Provisional	99.86
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK05884	223	short chain dehydrogenase; Provisional	99.86
PRK08303	305	short chain dehydrogenase; Provisional	99.85
PRK07201	657	short chain dehydrogenase; Provisional	99.85
PLN02780	320	ketoreductase/ oxidoreductase	99.85
PRK05855	582	short chain dehydrogenase; Validated	99.85
PRK05599	246	hypothetical protein; Provisional	99.85
PRK12367	245	short chain dehydrogenase; Provisional	99.84
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.84
PRK06484	520	short chain dehydrogenase; Validated	99.84
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.84
PRK08177	225	short chain dehydrogenase; Provisional	99.83
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.83
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.83
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.83
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.82
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.82
KOG0725	270	consensus Reductases with broad range of substrate	99.82
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.82
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.82
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.8
PLN00015	308	protochlorophyllide reductase	99.8
PRK08862	227	short chain dehydrogenase; Provisional	99.78
COG2910	211	Putative NADH-flavin reductase [General function p	99.77
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.77
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.77
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.77
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.76
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.75
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.75
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.75
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.74
KOG1208	314	consensus Dehydrogenases with different specificit	99.73
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.7
COG1028	251	FabG Dehydrogenases with different specificities (	99.69
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.68
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.68
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.66
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.64
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.64
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.63
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.63
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.56
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.56
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.55
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.45
PRK06720	169	hypothetical protein; Provisional	99.37
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.37
PRK08309	177	short chain dehydrogenase; Provisional	99.28
PTZ00325	321	malate dehydrogenase; Provisional	99.26
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.15
PLN00106	323	malate dehydrogenase	99.15
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.12
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.99
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.87
PRK09620	229	hypothetical protein; Provisional	98.78
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.76
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.76
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.69
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.65
PRK05086	312	malate dehydrogenase; Provisional	98.62
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.54
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.53
PRK14982	340	acyl-ACP reductase; Provisional	98.43
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.43
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.41
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.4
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.36
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.3
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.08
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.08
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.07
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.07
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	98.06
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	98.03
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.03
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	98.02
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	98.02
COG3268	382	Uncharacterized conserved protein [Function unknow	98.01
PRK05442	326	malate dehydrogenase; Provisional	98.0
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.95
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.93
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.92
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.92
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.92
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.82
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.8
PRK09496	453	trkA potassium transporter peripheral membrane com	97.8
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.78
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.78
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.74
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.72
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.64
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.62
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.61
PTZ00117	319	malate dehydrogenase; Provisional	97.61
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.59
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.58
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	97.57
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	97.57
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.56
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.55
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.53
PLN02602	350	lactate dehydrogenase	97.51
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.5
PRK04148	134	hypothetical protein; Provisional	97.48
PRK06223	307	malate dehydrogenase; Reviewed	97.48
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.46
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.45
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.44
PRK09496	453	trkA potassium transporter peripheral membrane com	97.42
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.4
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.38
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.37
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	97.36
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.36
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.33
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.31
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.31
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	97.3
PRK08223	287	hypothetical protein; Validated	97.29
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	97.29
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.28
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.28
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.26
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.26
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	97.25
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.24
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.23
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.21
PRK08328	231	hypothetical protein; Provisional	97.21
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.2
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	97.18
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	97.17
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	97.16
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.15
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.15
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.12
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	97.11
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.11
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.11
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.11
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	97.09
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	97.08
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	97.04
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.03
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.03
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.97
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.96
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.96
PRK07877	722	hypothetical protein; Provisional	96.96
PLN02383	344	aspartate semialdehyde dehydrogenase	96.94
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	96.92
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.92
PRK10669	558	putative cation:proton antiport protein; Provision	96.89
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.87
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.85
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.85
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.84
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.83
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.82
PLN00203	519	glutamyl-tRNA reductase	96.82
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.82
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.81
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	96.77
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.74
KOG2018	430	consensus Predicted dinucleotide-utilizing enzyme	96.72
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.72
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	96.71
PRK03659	601	glutathione-regulated potassium-efflux system prot	96.7
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.7
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.69
PRK08655	437	prephenate dehydrogenase; Provisional	96.69
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.69
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.67
PRK07411	390	hypothetical protein; Validated	96.65
PRK14851	679	hypothetical protein; Provisional	96.65
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.64
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	96.62
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	96.62
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.61
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.61
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	96.6
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	96.58
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.56
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.56
PRK14852	989	hypothetical protein; Provisional	96.52
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.51
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.49
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	96.49
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	96.49
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	96.47
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	96.45
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.44
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.43
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.4
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.4
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.39
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	96.39
PRK06153	393	hypothetical protein; Provisional	96.39
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.38
PRK06849	389	hypothetical protein; Provisional	96.38
cd01493	425	APPBP1_RUB Ubiquitin activating enzyme (E1) subuni	96.38
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.37
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	96.35
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	96.34
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	96.32
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.32
PRK03562	621	glutathione-regulated potassium-efflux system prot	96.3
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	96.27
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	96.27
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.25
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.23
TIGR03693	637	ocin_ThiF_like putative thiazole-containing bacter	96.23
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.22
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.21
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	96.21
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.2
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	96.2
COG2099	257	CobK Precorrin-6x reductase [Coenzyme metabolism]	96.2
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	96.18
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.16
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.13
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	96.09
PRK07574	385	formate dehydrogenase; Provisional	96.09
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.08
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.06
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	96.05
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	96.05
PLN02928	347	oxidoreductase family protein	96.04
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	96.01
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.01
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	95.98
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	95.97
PRK13243	333	glyoxylate reductase; Reviewed	95.96
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.94
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	95.91
PRK07417	279	arogenate dehydrogenase; Reviewed	95.91
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	95.88
KOG2013	603	consensus SMT3/SUMO-activating complex, catalytic	95.87
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	95.86
COG2130	340	Putative NADP-dependent oxidoreductases [General f	95.85
PLN02178	375	cinnamyl-alcohol dehydrogenase	95.85
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	95.85
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	95.84
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	95.84
COG1023	300	Gnd Predicted 6-phosphogluconate dehydrogenase [Ca	95.82
cd01486	307	Apg7 Apg7 is an E1-like protein, that activates tw	95.82
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	95.81
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	95.8
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	95.78

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=100.00  E-value=3.6e-45  Score=306.36  Aligned_cols=272  Identities=48%  Similarity=0.841  Sum_probs=238.8

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCc---ccccCCCCCCCceEEEEcccCChhHHHHHhcCccEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS---HLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~v   84 (307)
                      .+++|+|||||||||++|++.|+++|| .|.+++|++++..   .+..+..... +...+.+|++|++++.+++++||+|
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY-~V~gtVR~~~~~k~~~~L~~l~~a~~-~l~l~~aDL~d~~sf~~ai~gcdgV   82 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGY-TVRGTVRDPEDEKKTEHLRKLEGAKE-RLKLFKADLLDEGSFDKAIDGCDGV   82 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCC-EEEEEEcCcchhhhHHHHHhcccCcc-cceEEeccccccchHHHHHhCCCEE
Confidence            568999999999999999999999999 9999999887743   3555554444 6899999999999999999999999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcC-CcEEEEecCcceeccCCCC--CCcccccCCCCchhhhcccC
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGW--KGKVFDETSWTDLEYCKSRK  161 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~iSS~~~~~~~~~~--~~~~~~E~~~~~~~~~~~~~  161 (307)
                      ||+|......... +..+.++.++.|+.|++++|++.. ++|+|++||++++......  ...+++|+.|.++.|...+.
T Consensus        83 fH~Asp~~~~~~~-~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~  161 (327)
T KOG1502|consen   83 FHTASPVDFDLED-PEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKK  161 (327)
T ss_pred             EEeCccCCCCCCC-cHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhH
Confidence            9999988764433 456899999999999999999987 9999999999988765222  45689999999999988877


Q ss_pred             ccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHh
Q 021819          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLL  241 (307)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~  241 (307)
                      .+|..+|.++|...++++++.+++.+.+.|+.|+||...+..+.....+.++..|.....++....++|++|+|.+.+.+
T Consensus       162 ~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a  241 (327)
T KOG1502|consen  162 LWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAHVLA  241 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHHHHH
Confidence            89999999999999999999999999999999999999886666667777888887777777777799999999999999


Q ss_pred             hcCCCCCceEEecCCcccHHHHHHHHHHhCCCCCCCccccC
Q 021819          242 FESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFVFQ  282 (307)
Q Consensus       242 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (307)
                      ++.+...|+|+|.++...+.|+++.+.+.+|..++|.....
T Consensus       242 ~E~~~a~GRyic~~~~~~~~ei~~~l~~~~P~~~ip~~~~~  282 (327)
T KOG1502|consen  242 LEKPSAKGRYICVGEVVSIKEIADILRELFPDYPIPKKNAE  282 (327)
T ss_pred             HcCcccCceEEEecCcccHHHHHHHHHHhCCCCCCCCCCCc
Confidence            99999999999999998899999999999999887765543

>PLN02214 cinnamoyl-CoA reductase

Probab=100.00  E-value=9.1e-40  Score=287.11  Aligned_cols=265  Identities=43%  Similarity=0.745  Sum_probs=208.0

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCc--ccccCCCCCCCceEEEEcccCChhHHHHHhcCccE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS--HLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~   83 (307)
                      ..++|+|+||||+||||++|+++|+++|+ +|++++|+.+...  .+..+.... .++.++.+|++|.+++.++++++|+
T Consensus         7 ~~~~~~vlVTGatGfIG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~d~   84 (342)
T PLN02214          7 SPAGKTVCVTGAGGYIASWIVKILLERGY-TVKGTVRNPDDPKNTHLRELEGGK-ERLILCKADLQDYEALKAAIDGCDG   84 (342)
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCchhhhHHHHHHhhCCC-CcEEEEecCcCChHHHHHHHhcCCE
Confidence            35678999999999999999999999999 9999998654321  111111111 1578899999999999999999999


Q ss_pred             EEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCC-CCcccccCCCCchhhhcccCc
Q 021819           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW-KGKVFDETSWTDLEYCKSRKK  162 (307)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~-~~~~~~E~~~~~~~~~~~~~~  162 (307)
                      |||+|+...     ..+...+++|+.++.+++++|++.++++|||+||..++|+.+.. ...+++|++|....++..+.+
T Consensus        85 Vih~A~~~~-----~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~  159 (342)
T PLN02214         85 VFHTASPVT-----DDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKN  159 (342)
T ss_pred             EEEecCCCC-----CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhcccccc
Confidence            999998642     34578899999999999999999999999999998777764332 123588887654443333456


Q ss_pred             cHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCC-cchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHh
Q 021819          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL-NASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLL  241 (307)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~  241 (307)
                      +|+.+|.++|.+++.++++++++++++||++||||...... .....++ ....+.....+++.++|+|++|+|++++.+
T Consensus       160 ~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~i~V~Dva~a~~~a  238 (342)
T PLN02214        160 WYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVL-KYLTGSAKTYANLTQAYVDVRDVALAHVLV  238 (342)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHH-HHHcCCcccCCCCCcCeeEHHHHHHHHHHH
Confidence            89999999999999998888999999999999999865431 2222222 344555545566788999999999999999


Q ss_pred             hcCCCCCceEEecCCcccHHHHHHHHHHhCCCCCCCc
Q 021819          242 FESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHR  278 (307)
Q Consensus       242 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (307)
                      ++++...|.|+++++..++.|+++.+.+.+|..+++.
T Consensus       239 l~~~~~~g~yn~~~~~~~~~el~~~i~~~~~~~~~~~  275 (342)
T PLN02214        239 YEAPSASGRYLLAESARHRGEVVEILAKLFPEYPLPT  275 (342)
T ss_pred             HhCcccCCcEEEecCCCCHHHHHHHHHHHCCCCCCCC
Confidence            9987766789887778999999999999997655443

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=3.3e-40  Score=269.18  Aligned_cols=254  Identities=21%  Similarity=0.212  Sum_probs=207.0

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCC-CCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEEEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP-GSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~vi~   86 (307)
                      |+||||||+||||+|.+.+|++.|+ +|+++++- ....+.+...      ..+++++|+.|.+.+.++++  ++|.|||
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~-~vvV~DNL~~g~~~~v~~~------~~~f~~gDi~D~~~L~~vf~~~~idaViH   73 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGH-EVVVLDNLSNGHKIALLKL------QFKFYEGDLLDRALLTAVFEENKIDAVVH   73 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCC-eEEEEecCCCCCHHHhhhc------cCceEEeccccHHHHHHHHHhcCCCEEEE
Confidence            4899999999999999999999999 88888873 3333333221      15799999999999999997  6899999


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHH
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (307)
                      +||...++.+.+.+.++++.|+.||++|+++|++.++++|||.|| +++|+.+..  .|++|+.+..|.      ++||+
T Consensus        74 FAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSSt-AavYG~p~~--~PI~E~~~~~p~------NPYG~  144 (329)
T COG1087          74 FAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSST-AAVYGEPTT--SPISETSPLAPI------NPYGR  144 (329)
T ss_pred             CccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecc-hhhcCCCCC--cccCCCCCCCCC------Ccchh
Confidence            999998888888999999999999999999999999999999666 778988875  899999998876      89999


Q ss_pred             HHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCC--------CCcchHHHHHHHHcCCC-CC-C--------CCcccCc
Q 021819          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP--------YLNASCAVLQQLLQGSK-DT-Q--------EYHWLGA  228 (307)
Q Consensus       167 sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~--------~~~~~~~~~~~~~~~~~-~~-~--------~~~~~~~  228 (307)
                      ||++.|++++.+++.++++++++|-.++.|....+        ....++..++-.....+ +. +        +...+|+
T Consensus       145 sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDY  224 (329)
T COG1087         145 SKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDY  224 (329)
T ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeee
Confidence            99999999999999999999999999998855432        22334333333333333 11 2        2368999


Q ss_pred             ccHHHHHHHHHHhhcCCCCC---ceEEec-CCcccHHHHHHHHHHhCCCCCCCccc
Q 021819          229 VPVKDVAKAQVLLFESPAAS---GRYLCT-NGIYQFGDFAERVSKLFPEFPVHRFV  280 (307)
Q Consensus       229 i~~~dva~~~~~~~~~~~~~---g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (307)
                      ||+.|+|++.+.+++.-..+   ..||++ +.++|..|+++.+.++. +.++|..+
T Consensus       225 IHV~DLA~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vt-g~~ip~~~  279 (329)
T COG1087         225 IHVDDLADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVT-GRDIPVEI  279 (329)
T ss_pred             eehhHHHHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHh-CCcCceee
Confidence            99999999999988754333   358875 67899999999999999 78777644

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=9.4e-39  Score=279.14  Aligned_cols=268  Identities=40%  Similarity=0.705  Sum_probs=208.6

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCC--CCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG--AGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      ++|+|+|||||||||++|+++|+++|+ +|+++.|+....+....+..  ....+++++.+|++|++++.++++++|+||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   82 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVF   82 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEE
Confidence            467999999999999999999999999 89988887654332221110  011268899999999999999999999999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhc-CCcEEEEecCccee-ccCCCC-CCcccccCCCCchhhhcccCc
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAI-VPNPGW-KGKVFDETSWTDLEYCKSRKK  162 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~iSS~~~~-~~~~~~-~~~~~~E~~~~~~~~~~~~~~  162 (307)
                      |+|+..... ..++..+.++.|+.++.+++++|++. ++++||++||.+++ ++.... .+.+++|+++..|.+.....+
T Consensus        83 h~A~~~~~~-~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~  161 (322)
T PLN02986         83 HTASPVFFT-VKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKN  161 (322)
T ss_pred             EeCCCcCCC-CCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhcccc
Confidence            999975432 12333467899999999999999986 68999999997654 333221 234688888776654333446


Q ss_pred             cHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhh
Q 021819          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLF  242 (307)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~  242 (307)
                      +|+.+|.++|.+++.+.++++++++++||++||||...........++..+..+.+. .+.+.++|+|++|+|++++.++
T Consensus       162 ~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~v~v~Dva~a~~~al  240 (322)
T PLN02986        162 WYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL-FNNRFYRFVDVRDVALAHIKAL  240 (322)
T ss_pred             chHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC-CCCcCcceeEHHHHHHHHHHHh
Confidence            899999999999999988889999999999999998654323334555566666543 3456789999999999999999


Q ss_pred             cCCCCCceEEecCCcccHHHHHHHHHHhCCCCCCCc
Q 021819          243 ESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHR  278 (307)
Q Consensus       243 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (307)
                      +++...+.|+++++.+++.|+++.+.+.+|...++.
T Consensus       241 ~~~~~~~~yni~~~~~s~~e~~~~i~~~~~~~~~~~  276 (322)
T PLN02986        241 ETPSANGRYIIDGPIMSVNDIIDILRELFPDLCIAD  276 (322)
T ss_pred             cCcccCCcEEEecCCCCHHHHHHHHHHHCCCCCCCC
Confidence            988766789988788999999999999998655543

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=8.2e-39  Score=259.77  Aligned_cols=252  Identities=19%  Similarity=0.243  Sum_probs=216.3

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCC--CCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFP--GSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGV   84 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~v   84 (307)
                      |++|||||+||||++++++++++.. .+|+.++.-  ....+.++.+..  .++..++++|++|.+.+.++++  ++|+|
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~--~~~~~fv~~DI~D~~~v~~~~~~~~~D~V   78 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVED--SPRYRFVQGDICDRELVDRLFKEYQPDAV   78 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhc--CCCceEEeccccCHHHHHHHHHhcCCCeE
Confidence            4899999999999999999999864 257777761  222233333322  2289999999999999999998  68999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEecCcceeccCCCCCCcccccCCCCchhhhcccCcc
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (307)
                      +|+|+.+..+.+...+...+++|+.||.+|++++++...+ ||++||| -.+|+.....+..++|++|..|+      +|
T Consensus        79 vhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HIST-DEVYG~l~~~~~~FtE~tp~~Ps------SP  151 (340)
T COG1088          79 VHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHIST-DEVYGDLGLDDDAFTETTPYNPS------SP  151 (340)
T ss_pred             EEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEecc-ccccccccCCCCCcccCCCCCCC------CC
Confidence            9999999999999999999999999999999999999753 8999998 66788766544579999999998      79


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC---CCcccCcccHHHHHHHHHH
Q 021819          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQVL  240 (307)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~dva~~~~~  240 (307)
                      |+.||+.++.++++|.+.+|++++|.|+++-|||.+.+. ..++.++.+.+.|+++++   +.+.+||++++|=++++..
T Consensus       152 YSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpE-KlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~  230 (340)
T COG1088         152 YSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPE-KLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDL  230 (340)
T ss_pred             cchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCch-hhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHH
Confidence            999999999999999999999999999999999987665 678888999999998775   4489999999999999999


Q ss_pred             hhcCCCCCceEEecC-CcccHHHHHHHHHHhC
Q 021819          241 LFESPAASGRYLCTN-GIYQFGDFAERVSKLF  271 (307)
Q Consensus       241 ~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~  271 (307)
                      ++++...+.+||+++ ...+-.++++.+.+.+
T Consensus       231 Vl~kg~~GE~YNIgg~~E~~Nlevv~~i~~~l  262 (340)
T COG1088         231 VLTKGKIGETYNIGGGNERTNLEVVKTICELL  262 (340)
T ss_pred             HHhcCcCCceEEeCCCccchHHHHHHHHHHHh
Confidence            999988866898765 5678889999998888

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=3.2e-38  Score=276.19  Aligned_cols=266  Identities=40%  Similarity=0.695  Sum_probs=208.4

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCC--CCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP--GAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      +|+|+||||+||||++|++.|+++|+ +|++.+|+.........+.  .....+++++.+|++|.+++.++++++|+|||
T Consensus         5 ~k~vlVtG~~G~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   83 (325)
T PLN02989          5 GKVVCVTGASGYIASWIVKLLLFRGY-TINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH   83 (325)
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCC-EEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence            67999999999999999999999999 8988888755432211110  00112688999999999999999999999999


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhc-CCcEEEEecCcceeccCCC--CCCcccccCCCCchhhhcccCcc
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPNPG--WKGKVFDETSWTDLEYCKSRKKW  163 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~iSS~~~~~~~~~--~~~~~~~E~~~~~~~~~~~~~~~  163 (307)
                      +||........+++.+.+++|+.++.+++++|.+. +.++||++||..++++...  ....+++|+++..|.....+.++
T Consensus        84 ~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~  163 (325)
T PLN02989         84 TASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQW  163 (325)
T ss_pred             eCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccc
Confidence            99975443334556788999999999999999885 5689999999776655321  12356899988777543344568


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhc
Q 021819          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE  243 (307)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~  243 (307)
                      |+.+|.++|.+++.+++.++++++++||+++|||...........++..+..++.. ...+.++|+|++|+|++++.+++
T Consensus       164 Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~-~~~~~r~~i~v~Dva~a~~~~l~  242 (325)
T PLN02989        164 YVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNP-FNTTHHRFVDVRDVALAHVKALE  242 (325)
T ss_pred             hHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCC-CCCcCcCeeEHHHHHHHHHHHhc
Confidence            99999999999999988889999999999999998765433444556666655543 23456899999999999999998


Q ss_pred             CCCCCceEEecCCcccHHHHHHHHHHhCCCCCC
Q 021819          244 SPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV  276 (307)
Q Consensus       244 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (307)
                      ++...|.||++++.+++.|+++.+.+.+|...+
T Consensus       243 ~~~~~~~~ni~~~~~s~~ei~~~i~~~~~~~~~  275 (325)
T PLN02989        243 TPSANGRYIIDGPVVTIKDIENVLREFFPDLCI  275 (325)
T ss_pred             CcccCceEEEecCCCCHHHHHHHHHHHCCCCCC
Confidence            876667899887889999999999999975443

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=9.3e-39  Score=281.61  Aligned_cols=256  Identities=16%  Similarity=0.103  Sum_probs=200.5

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcc-cccC----CCCCCCceEEEEcccCChhHHHHHhcCc
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH-LFAL----PGAGDANLRVFEADVLDSGAVSRAVEGC   81 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-~~~~----~~~~~~~~~~i~~D~~d~~~~~~~~~~~   81 (307)
                      +++|+|+|||||||||++|+++|+++|+ +|++++|....... ....    ......++.++.+|++|.+++.++++++
T Consensus        13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~   91 (348)
T PRK15181         13 LAPKRWLITGVAGFIGSGLLEELLFLNQ-TVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNV   91 (348)
T ss_pred             ccCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCC
Confidence            3568999999999999999999999999 99999985432111 1111    0001115788999999999999999999


Q ss_pred             cEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccC
Q 021819           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK  161 (307)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  161 (307)
                      |+|||+|+.........+....+++|+.|+.+++++|++.++++|||+||.. +|+...  +.+..|+++..|.      
T Consensus        92 d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~-vyg~~~--~~~~~e~~~~~p~------  162 (348)
T PRK15181         92 DYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSS-TYGDHP--DLPKIEERIGRPL------  162 (348)
T ss_pred             CEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechH-hhCCCC--CCCCCCCCCCCCC------
Confidence            9999999976543334455678999999999999999999999999999955 555432  2456677665554      


Q ss_pred             ccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC---CcchHHHHHHHHcCCCCCC---CCcccCcccHHHHH
Q 021819          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVA  235 (307)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~dva  235 (307)
                      ++|+.+|.++|.+++.+.+.++++++++||++||||.+...   ...+..++.+...+.++.+   +.+.++|+|++|+|
T Consensus       163 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a  242 (348)
T PRK15181        163 SPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVI  242 (348)
T ss_pred             ChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHH
Confidence            68999999999999988888899999999999999986543   2356677777777776554   34689999999999


Q ss_pred             HHHHHhhcCCC---CCceEEec-CCcccHHHHHHHHHHhCC
Q 021819          236 KAQVLLFESPA---ASGRYLCT-NGIYQFGDFAERVSKLFP  272 (307)
Q Consensus       236 ~~~~~~~~~~~---~~g~~~~~-~~~~~~~~~~~~~~~~~~  272 (307)
                      +++++++..+.   ..+.||++ ++++++.|+++.+.+.++
T Consensus       243 ~a~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~  283 (348)
T PRK15181        243 QANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLN  283 (348)
T ss_pred             HHHHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhC
Confidence            99988776432   34579875 567999999999998884

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=2.1e-38  Score=277.10  Aligned_cols=265  Identities=43%  Similarity=0.741  Sum_probs=205.4

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc---CCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA---LPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      +|+|+|||||||||++|+++|+++|+ +|++++|+.........   .... ..+++++.+|++|++++.++++++|+||
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   81 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQRGY-TVKATVRDPNDPKKTEHLLALDGA-KERLHLFKANLLEEGSFDSVVDGCEGVF   81 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHCCC-EEEEEEcCCCchhhHHHHHhccCC-CCceEEEeccccCcchHHHHHcCCCEEE
Confidence            57999999999999999999999999 99999886543221111   1111 1268899999999999999999999999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhc-CCcEEEEecCccee-ccCCC-CCCcccccCCCCchhhhcccCc
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAI-VPNPG-WKGKVFDETSWTDLEYCKSRKK  162 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~iSS~~~~-~~~~~-~~~~~~~E~~~~~~~~~~~~~~  162 (307)
                      |+|+..... ..++....+++|+.++.+++++|++. ++++|||+||.+++ |+... ..+.+++|+.+..|.+...+.+
T Consensus        82 h~A~~~~~~-~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~  160 (322)
T PLN02662         82 HTASPFYHD-VTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKL  160 (322)
T ss_pred             EeCCcccCC-CCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccc
Confidence            999875321 12222478899999999999999987 78999999997642 43211 1234688888777765445556


Q ss_pred             cHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhh
Q 021819          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLF  242 (307)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~  242 (307)
                      +|+.+|.++|++++.++++++++++++||+++|||............+.+...+.. ..+++.++|+|++|+|++++.++
T Consensus       161 ~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~a~~~~~  239 (322)
T PLN02662        161 WYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQ-TFPNASYRWVDVRDVANAHIQAF  239 (322)
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCc-cCCCCCcCeEEHHHHHHHHHHHh
Confidence            89999999999999998888999999999999999865432334445555555543 34567899999999999999999


Q ss_pred             cCCCCCceEEecCCcccHHHHHHHHHHhCCCCCCC
Q 021819          243 ESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVH  277 (307)
Q Consensus       243 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (307)
                      +++...|.|+++++.+++.|+++.+.+.+|..+.+
T Consensus       240 ~~~~~~~~~~~~g~~~s~~e~~~~i~~~~~~~~~~  274 (322)
T PLN02662        240 EIPSASGRYCLVERVVHYSEVVKILHELYPTLQLP  274 (322)
T ss_pred             cCcCcCCcEEEeCCCCCHHHHHHHHHHHCCCCCCC
Confidence            98766678888888899999999999998654433

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=8.4e-38  Score=265.74  Aligned_cols=253  Identities=30%  Similarity=0.342  Sum_probs=189.2

Q ss_pred             EEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCc--ccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEecc
Q 021819           13 CVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSS--HLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (307)
Q Consensus        13 lItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a~   89 (307)
                      |||||+||||++|+++|+++|. .+|.+++++.....  .....    . ...++.+|++|++++.++++++|+|||+|+
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~----~-~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa   75 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKS----G-VKEYIQGDITDPESLEEALEGVDVVFHTAA   75 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcc----c-ceeEEEeccccHHHHHHHhcCCceEEEeCc
Confidence            6999999999999999999992 38999888654432  11111    0 334899999999999999999999999999


Q ss_pred             CCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCC-cccccCCCCchhhhcccCccHHHHH
Q 021819           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKG-KVFDETSWTDLEYCKSRKKWYPVSK  168 (307)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~-~~~~E~~~~~~~~~~~~~~~y~~sK  168 (307)
                      ...... ....+..+++|+.||++++++|++.++++|||+||.+++........ ...+|+.+..    ....++|+.||
T Consensus        76 ~~~~~~-~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~----~~~~~~Y~~SK  150 (280)
T PF01073_consen   76 PVPPWG-DYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYP----SSPLDPYAESK  150 (280)
T ss_pred             cccccC-cccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCccc----ccccCchHHHH
Confidence            865432 34567899999999999999999999999999999887765322111 1235554322    23457899999


Q ss_pred             HHHHHHHHHHHH---h--cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCC-CCC--CCcccCcccHHHHHHHHHH
Q 021819          169 TLAEKAAWEFAE---K--HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK-DTQ--EYHWLGAVPVKDVAKAQVL  240 (307)
Q Consensus       169 ~~~e~~~~~~~~---~--~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~i~~~dva~~~~~  240 (307)
                      .++|++++++..   +  ..+++++|||+.||||++......+   ......+.. ...  +....++++++|+|.+++.
T Consensus       151 ~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~---~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvl  227 (280)
T PF01073_consen  151 ALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRL---VKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVL  227 (280)
T ss_pred             HHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchh---hHHHHhcccceeecCCCceECcEeHHHHHHHHHH
Confidence            999999988765   2  2499999999999999976553333   333333422 222  3467899999999999988


Q ss_pred             hhcC-------CCCCc-eEEec-CCccc-HHHHHHHHHHhCCCCCCCcc
Q 021819          241 LFES-------PAASG-RYLCT-NGIYQ-FGDFAERVSKLFPEFPVHRF  279 (307)
Q Consensus       241 ~~~~-------~~~~g-~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~  279 (307)
                      +.+.       ....| .|+++ +++.. +.|+++.+.+.+ +.+.+..
T Consensus       228 A~~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~-G~~~~~~  275 (280)
T PF01073_consen  228 AAQALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEAL-GYPPPKS  275 (280)
T ss_pred             HHHHhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHC-CCCCCcc
Confidence            7652       23345 47665 56787 999999999999 7776653

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN00198 anthocyanidin reductase; Provisional

Probab=100.00  E-value=1.7e-36  Score=266.61  Aligned_cols=273  Identities=36%  Similarity=0.605  Sum_probs=199.3

Q ss_pred             CccccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccc---ccCCCCCCCceEEEEcccCChhHHHHH
Q 021819            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL---FALPGAGDANLRVFEADVLDSGAVSRA   77 (307)
Q Consensus         1 m~~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~i~~D~~d~~~~~~~   77 (307)
                      |...+..++|+|+||||+||||++|+++|+++|+ +|+++.|+.......   ..+.. .. +++++.+|++|++++.++
T Consensus         1 ~~~~~~~~~~~vlItG~~GfIG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~d~~~~~~~   77 (338)
T PLN00198          1 MATLTPTGKKTACVIGGTGFLASLLIKLLLQKGY-AVNTTVRDPENQKKIAHLRALQE-LG-DLKIFGADLTDEESFEAP   77 (338)
T ss_pred             CCcccCCCCCeEEEECCchHHHHHHHHHHHHCCC-EEEEEECCCCCHHHHHHHHhcCC-CC-ceEEEEcCCCChHHHHHH
Confidence            4444455678999999999999999999999999 898888865432211   11111 11 578999999999999999


Q ss_pred             hcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhc-CCcEEEEecCcceeccCCCC-CCcccccCCCCchh
Q 021819           78 VEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPNPGW-KGKVFDETSWTDLE  155 (307)
Q Consensus        78 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~iSS~~~~~~~~~~-~~~~~~E~~~~~~~  155 (307)
                      ++++|+|||+|+..... ..++....+++|+.++.+++++|.+. ++++||++||.++++..... .+.+++|+.+....
T Consensus        78 ~~~~d~vih~A~~~~~~-~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~  156 (338)
T PLN00198         78 IAGCDLVFHVATPVNFA-SEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVE  156 (338)
T ss_pred             HhcCCEEEEeCCCCccC-CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchh
Confidence            99999999999864321 12333457799999999999999886 58899999997655433211 12456666432111


Q ss_pred             h---hcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC-C-------Cc
Q 021819          156 Y---CKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ-E-------YH  224 (307)
Q Consensus       156 ~---~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~  224 (307)
                      .   ...+.++|+.+|.++|.+++.+++.++++++++||++||||...........++.....+....+ +       ++
T Consensus       157 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  236 (338)
T PLN00198        157 FLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSG  236 (338)
T ss_pred             hhhhcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccC
Confidence            0   01123579999999999999999888999999999999999864332222223334455544322 1       12


Q ss_pred             ccCcccHHHHHHHHHHhhcCCCCCceEEecCCcccHHHHHHHHHHhCCCCCCC
Q 021819          225 WLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVH  277 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (307)
                      .++|+|++|+|++++.+++.+...+.|++++...++.++++.+.+.+|..+++
T Consensus       237 ~~~~i~V~D~a~a~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~~  289 (338)
T PLN00198        237 SISITHVEDVCRAHIFLAEKESASGRYICCAANTSVPELAKFLIKRYPQYQVP  289 (338)
T ss_pred             CcceeEHHHHHHHHHHHhhCcCcCCcEEEecCCCCHHHHHHHHHHHCCCCCCC
Confidence            47999999999999999988766677888888899999999999998654443

>PLN02583 cinnamoyl-CoA reductase

Probab=100.00  E-value=2.4e-36  Score=260.64  Aligned_cols=260  Identities=32%  Similarity=0.532  Sum_probs=201.4

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcc---cccCCCCCCCceEEEEcccCChhHHHHHhcCccEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH---LFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~v   84 (307)
                      ++++|+|||||||||++|+++|+++|+ +|++++|+......   +..+.... .+++++.+|++|.+++.+++.++|.|
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~-~V~~~~R~~~~~~~~~~~~~l~~~~-~~~~~~~~Dl~d~~~~~~~l~~~d~v   82 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGY-TVHAAVQKNGETEIEKEIRGLSCEE-ERLKVFDVDPLDYHSILDALKGCSGL   82 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEEcCchhhhHHHHHHhcccCC-CceEEEEecCCCHHHHHHHHcCCCEE
Confidence            467999999999999999999999999 99999885432211   12221111 26889999999999999999999999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhc-CCcEEEEecCcceeccC-CC-CCCcccccCCCCchhhhcccC
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPN-PG-WKGKVFDETSWTDLEYCKSRK  161 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~iSS~~~~~~~-~~-~~~~~~~E~~~~~~~~~~~~~  161 (307)
                      +|+++.....  ...+.+.+++|+.++.+++++|.+. ++++||++||.++++.. .. ....+++|++|..+.+...+.
T Consensus        83 ~~~~~~~~~~--~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  160 (297)
T PLN02583         83 FCCFDPPSDY--PSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFK  160 (297)
T ss_pred             EEeCccCCcc--cccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcc
Confidence            9987643221  1235688999999999999999886 57899999998765422 11 123478898887776655555


Q ss_pred             ccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHh
Q 021819          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLL  241 (307)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~  241 (307)
                      .+|+.+|.++|++++.+++..+++++++||+.||||......    .    ...+.....+...++++|++|+|++++.+
T Consensus       161 ~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~----~----~~~~~~~~~~~~~~~~v~V~Dva~a~~~a  232 (297)
T PLN02583        161 LWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN----P----YLKGAAQMYENGVLVTVDVNFLVDAHIRA  232 (297)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch----h----hhcCCcccCcccCcceEEHHHHHHHHHHH
Confidence            689999999999999998888999999999999999764321    1    22233233344567899999999999999


Q ss_pred             hcCCCCCceEEecCCccc-HHHHHHHHHHhCCCCCCCcc
Q 021819          242 FESPAASGRYLCTNGIYQ-FGDFAERVSKLFPEFPVHRF  279 (307)
Q Consensus       242 ~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  279 (307)
                      ++.+...|+|+|.++..+ +.++.+.+.+.+|+.+.+..
T Consensus       233 l~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  271 (297)
T PLN02583        233 FEDVSSYGRYLCFNHIVNTEEDAVKLAQMLSPLIPSPPP  271 (297)
T ss_pred             hcCcccCCcEEEecCCCccHHHHHHHHHHhCCCCCCCCc
Confidence            998888889999887655 67899999999999887753

>PLN02650 dihydroflavonol-4-reductase

Probab=100.00  E-value=4.9e-36  Score=264.94  Aligned_cols=265  Identities=38%  Similarity=0.678  Sum_probs=194.1

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCC--CCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG--AGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      .|+||||||+||||++|+++|+++|+ +|++++|+......+..+..  ....++.++.+|++|.+.+.++++++|+|||
T Consensus         5 ~k~iLVTGatGfIGs~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH   83 (351)
T PLN02650          5 KETVCVTGASGFIGSWLVMRLLERGY-TVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFH   83 (351)
T ss_pred             CCEEEEeCCcHHHHHHHHHHHHHCCC-EEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEE
Confidence            56999999999999999999999999 99999887554432211110  0011578899999999999999999999999


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcC-CcEEEEecCcceeccCCCCCCcccccCCCCchhh---hcccCc
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEY---CKSRKK  162 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~---~~~~~~  162 (307)
                      +|+..... ..++....+++|+.++.+++++|++.+ +++|||+||.++++..... ...++|+.+.....   ...+..
T Consensus        84 ~A~~~~~~-~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~-~~~~~E~~~~~~~~~~~~~~~~~  161 (351)
T PLN02650         84 VATPMDFE-SKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQ-KPVYDEDCWSDLDFCRRKKMTGW  161 (351)
T ss_pred             eCCCCCCC-CCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCC-CCccCcccCCchhhhhccccccc
Confidence            99865422 123335788999999999999999876 7899999997665543221 12256765432111   111225


Q ss_pred             cHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCC-cchHHHHHHHHcCCCCCC-CCcccCcccHHHHHHHHHH
Q 021819          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL-NASCAVLQQLLQGSKDTQ-EYHWLGAVPVKDVAKAQVL  240 (307)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~dva~~~~~  240 (307)
                      +|+.+|.++|.+++.++++++++++++||++||||...... ..+...+. ...+..... ....++|+|++|+|++++.
T Consensus       162 ~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~r~~v~V~Dva~a~~~  240 (351)
T PLN02650        162 MYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALS-LITGNEAHYSIIKQGQFVHLDDLCNAHIF  240 (351)
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHH-HhcCCccccCcCCCcceeeHHHHHHHHHH
Confidence            79999999999999999889999999999999999765421 11111111 122222211 1245799999999999999


Q ss_pred             hhcCCCCCceEEecCCcccHHHHHHHHHHhCCCCCCC
Q 021819          241 LFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVH  277 (307)
Q Consensus       241 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (307)
                      +++++...|.|+++++.+++.|+++.+.+.++..+++
T Consensus       241 ~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~~~~~~~  277 (351)
T PLN02650        241 LFEHPAAEGRYICSSHDATIHDLAKMLREKYPEYNIP  277 (351)
T ss_pred             HhcCcCcCceEEecCCCcCHHHHHHHHHHhCcccCCC
Confidence            9998766678988888899999999999988654443

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=100.00  E-value=3.3e-36  Score=266.56  Aligned_cols=253  Identities=18%  Similarity=0.203  Sum_probs=194.8

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCc--ccccCCCCCCCceEEEEcccCChhHHHHHhcC--ccEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS--HLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGV   84 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~--~d~v   84 (307)
                      ||+|+|||||||||++|++.|+++|+..|++.+|......  .+....  ...++.++.+|++|.+++.+++++  +|+|
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~V   78 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVA--QSERFAFEKVDICDRAELARVFTEHQPDCV   78 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcc--cCCceEEEECCCcChHHHHHHHhhcCCCEE
Confidence            4699999999999999999999999833545554322111  111111  111578889999999999999984  8999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHh---------cCCcEEEEecCcceeccCCCCCCcccccCCCCchh
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKR---------FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~---------~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~  155 (307)
                      ||+||........+.+...+++|+.++.+++++|.+         .++++||++||.+ +|+.......+++|+++..|.
T Consensus        79 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~-vyg~~~~~~~~~~E~~~~~p~  157 (355)
T PRK10217         79 MHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDE-VYGDLHSTDDFFTETTPYAPS  157 (355)
T ss_pred             EECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchh-hcCCCCCCCCCcCCCCCCCCC
Confidence            999997654333345678999999999999999976         2467999999855 555432223568888766554


Q ss_pred             hhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC---CCcccCcccHH
Q 021819          156 YCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVK  232 (307)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~  232 (307)
                            +.|+.+|.++|.+++.++++.+++++++||++||||..... ..+..++.+...+.++.+   +++.++|+|++
T Consensus       158 ------s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~-~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~  230 (355)
T PRK10217        158 ------SPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPE-KLIPLMILNALAGKPLPVYGNGQQIRDWLYVE  230 (355)
T ss_pred             ------ChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcc-cHHHHHHHHHhcCCCceEeCCCCeeeCcCcHH
Confidence                  67999999999999999888999999999999999986432 345566666676665432   45789999999


Q ss_pred             HHHHHHHHhhcCCCCCceEEec-CCcccHHHHHHHHHHhC
Q 021819          233 DVAKAQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLF  271 (307)
Q Consensus       233 dva~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~  271 (307)
                      |++++++.+++.+..++.||++ ++.+++.|+++.+.+.+
T Consensus       231 D~a~a~~~~~~~~~~~~~yni~~~~~~s~~~~~~~i~~~~  270 (355)
T PRK10217        231 DHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELL  270 (355)
T ss_pred             HHHHHHHHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHh
Confidence            9999999999876555679876 46789999999999987

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=3.9e-36  Score=265.16  Aligned_cols=253  Identities=17%  Similarity=0.288  Sum_probs=195.0

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHC-CCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccC-ChhHHHHHhcCccEEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL-DSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~-d~~~~~~~~~~~d~vi~   86 (307)
                      ||+|+|||||||||++|+++|+++ |+ +|++++|+......+...    . +++++.+|++ +.+.+.++++++|+|||
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~-~V~~~~r~~~~~~~~~~~----~-~~~~~~~Dl~~~~~~~~~~~~~~d~ViH   74 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDW-EVYGMDMQTDRLGDLVNH----P-RMHFFEGDITINKEWIEYHVKKCDVILP   74 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCC-eEEEEeCcHHHHHHhccC----C-CeEEEeCCCCCCHHHHHHHHcCCCEEEE
Confidence            468999999999999999999987 68 899999865332222111    1 6889999997 67788888899999999


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCch-hhhcccCccHH
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL-EYCKSRKKWYP  165 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~-~~~~~~~~~y~  165 (307)
                      +|+.........++...+++|+.++++++++|++.+ ++|||+||.. +|+...  ..+++|++++.. .....+.++|+
T Consensus        75 ~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~-vyg~~~--~~~~~ee~~~~~~~~~~~p~~~Y~  150 (347)
T PRK11908         75 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSE-VYGMCP--DEEFDPEASPLVYGPINKPRWIYA  150 (347)
T ss_pred             CcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecce-eeccCC--CcCcCccccccccCcCCCccchHH
Confidence            999755433344567788999999999999999988 7999999965 555332  245666654221 11112235799


Q ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCC-------CCcchHHHHHHHHcCCCCCC---CCcccCcccHHHHH
Q 021819          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP-------YLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVA  235 (307)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~-------~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~dva  235 (307)
                      .+|.++|++++.++++++++++++||+++|||....       ....+..++.++..+.+..+   +.+.++|+|++|++
T Consensus       151 ~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a  230 (347)
T PRK11908        151 CSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGI  230 (347)
T ss_pred             HHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHH
Confidence            999999999999988899999999999999997542       12345677777777776544   34789999999999


Q ss_pred             HHHHHhhcCCC---CCceEEecC--CcccHHHHHHHHHHhC
Q 021819          236 KAQVLLFESPA---ASGRYLCTN--GIYQFGDFAERVSKLF  271 (307)
Q Consensus       236 ~~~~~~~~~~~---~~g~~~~~~--~~~~~~~~~~~~~~~~  271 (307)
                      ++++.+++++.   .++.||+++  ..+++.|+++.+.+.+
T Consensus       231 ~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~  271 (347)
T PRK11908        231 DALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELA  271 (347)
T ss_pred             HHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHh
Confidence            99999998763   235798875  3699999999999887

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=9e-36  Score=266.39  Aligned_cols=260  Identities=17%  Similarity=0.249  Sum_probs=191.6

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHC-CCCeEEEEeCCCCCCcccccCCC-CCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPG-AGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      +.|+|+|||||||||++|++.|+++ |+ +|++++|+......+..... ....+++++.+|++|.+.+.++++++|+||
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~-~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~Vi   91 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPH-KVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTI   91 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCC-EEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEE
Confidence            4568999999999999999999998 57 89999986544333221110 001168999999999999999999999999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchh----------
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE----------  155 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~----------  155 (307)
                      |+|+............+.+..|+.++.+++++|++.+ ++|||+||.. +|+....  .++.|+.+..+.          
T Consensus        92 HlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~-vYg~~~~--~~~~e~~p~~~~~~~~~~~e~~  167 (386)
T PLN02427         92 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCE-VYGKTIG--SFLPKDHPLRQDPAFYVLKEDE  167 (386)
T ss_pred             EcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeee-eeCCCcC--CCCCcccccccccccccccccc
Confidence            9999754322223344667789999999999999887 8999999965 5654321  233343332110          


Q ss_pred             ----h--hcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC----------CcchHHHHHHHHcCCCC
Q 021819          156 ----Y--CKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY----------LNASCAVLQQLLQGSKD  219 (307)
Q Consensus       156 ----~--~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~----------~~~~~~~~~~~~~~~~~  219 (307)
                          +  ...+.+.|+.+|.++|.+++.+++.++++++++||++||||.....          ...+..++.....+.+.
T Consensus       168 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  247 (386)
T PLN02427        168 SPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPL  247 (386)
T ss_pred             cccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCe
Confidence                0  0012357999999999999988888899999999999999975311          12333445566666664


Q ss_pred             CC---CCcccCcccHHHHHHHHHHhhcCCC-CC-ceEEecC--CcccHHHHHHHHHHhCC
Q 021819          220 TQ---EYHWLGAVPVKDVAKAQVLLFESPA-AS-GRYLCTN--GIYQFGDFAERVSKLFP  272 (307)
Q Consensus       220 ~~---~~~~~~~i~~~dva~~~~~~~~~~~-~~-g~~~~~~--~~~~~~~~~~~~~~~~~  272 (307)
                      .+   +.+.++|+|++|+|++++.+++++. .. +.||+++  +.+++.|+++.+.+.++
T Consensus       248 ~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g  307 (386)
T PLN02427        248 KLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYA  307 (386)
T ss_pred             EEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhc
Confidence            43   3467899999999999999998764 33 4788875  37999999999999984

>PLN02686 cinnamoyl-CoA reductase

Probab=100.00  E-value=1.4e-35  Score=262.66  Aligned_cols=265  Identities=29%  Similarity=0.476  Sum_probs=196.4

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCC-----CCCceEEEEcccCChhHHHHHhcC
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA-----GDANLRVFEADVLDSGAVSRAVEG   80 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~i~~D~~d~~~~~~~~~~   80 (307)
                      ..++|+|+||||+||||++|++.|+++|+ +|+++.|+......+..+...     ...++.++.+|++|.+++.+++++
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~-~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~  128 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHGY-SVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG  128 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHh
Confidence            45678999999999999999999999999 898888765433222221100     011578899999999999999999


Q ss_pred             ccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhc-CCcEEEEecCcc-eeccCC--CCCCcccccCCCCchhh
Q 021819           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSIS-AIVPNP--GWKGKVFDETSWTDLEY  156 (307)
Q Consensus        81 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~iSS~~-~~~~~~--~~~~~~~~E~~~~~~~~  156 (307)
                      +|.|||+|+...............++|+.++.+++++|++. ++++|||+||.. .+|+..  ...+.+++|+.+.....
T Consensus       129 ~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~  208 (367)
T PLN02686        129 CAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESF  208 (367)
T ss_pred             ccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhh
Confidence            99999999875432211122456788999999999999986 799999999964 345431  11113477776554433


Q ss_pred             hcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHH
Q 021819          157 CKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAK  236 (307)
Q Consensus       157 ~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~  236 (307)
                      +..+.++|+.+|.++|.+++.+++..+++++++||++||||+......  ...+ ....+....+++...+|+|++|+|+
T Consensus       209 ~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~--~~~~-~~~~g~~~~~g~g~~~~v~V~Dva~  285 (367)
T PLN02686        209 CRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNS--TATI-AYLKGAQEMLADGLLATADVERLAE  285 (367)
T ss_pred             cccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCC--hhHH-HHhcCCCccCCCCCcCeEEHHHHHH
Confidence            334446899999999999999888889999999999999998543211  1122 3444544444556678999999999


Q ss_pred             HHHHhhcCC---CCCceEEecCCcccHHHHHHHHHHhCCCCC
Q 021819          237 AQVLLFESP---AASGRYLCTNGIYQFGDFAERVSKLFPEFP  275 (307)
Q Consensus       237 ~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (307)
                      +++.+++..   ...+.|+++++.+++.|+++.+.+.+ +.+
T Consensus       286 A~~~al~~~~~~~~~~~yi~~g~~~s~~e~~~~i~~~~-g~~  326 (367)
T PLN02686        286 AHVCVYEAMGNKTAFGRYICFDHVVSREDEAEELARQI-GLP  326 (367)
T ss_pred             HHHHHHhccCCCCCCCcEEEeCCCccHHHHHHHHHHHc-CCC
Confidence            999999853   33457988889999999999999999 443

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.3e-35  Score=261.99  Aligned_cols=257  Identities=20%  Similarity=0.193  Sum_probs=199.3

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcC--ccEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGVF   85 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~--~d~vi   85 (307)
                      ++|+|+||||+||||++|++.|+++|+ +|++++|+............... ++.++.+|++|.+++.+++++  +|+||
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~d~vi   80 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAK-KIEDHFGDIRDAAKLRKAIAEFKPEIVF   80 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcC-CceEEEccCCCHHHHHHHHhhcCCCEEE
Confidence            367999999999999999999999999 89999987654332211111111 577889999999999999874  69999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcC-CcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccH
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (307)
                      |+|+.........++...+++|+.++.+++++|++.+ +++||++||.. +|+.... ..+++|+++..|.      ++|
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~-vyg~~~~-~~~~~e~~~~~p~------~~Y  152 (349)
T TIGR02622        81 HLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDK-CYRNDEW-VWGYRETDPLGGH------DPY  152 (349)
T ss_pred             ECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechh-hhCCCCC-CCCCccCCCCCCC------Ccc
Confidence            9999654444445567889999999999999998876 78999999955 5553321 2356777665553      689


Q ss_pred             HHHHHHHHHHHHHHHHhc-------CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC--CCcccCcccHHHHH
Q 021819          165 PVSKTLAEKAAWEFAEKH-------GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ--EYHWLGAVPVKDVA  235 (307)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~-------~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~dva  235 (307)
                      +.+|.++|.+++.+++.+       +++++++||+++|||++......+..++.....+.+..+  +.+.++|+|++|+|
T Consensus       153 ~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~D~a  232 (349)
T TIGR02622       153 SSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVLEPL  232 (349)
T ss_pred             hhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeHHHHH
Confidence            999999999998887654       899999999999999764333556777788877777655  45899999999999


Q ss_pred             HHHHHhhcCC-----CCCceEEecC---CcccHHHHHHHHHHhCCCC
Q 021819          236 KAQVLLFESP-----AASGRYLCTN---GIYQFGDFAERVSKLFPEF  274 (307)
Q Consensus       236 ~~~~~~~~~~-----~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~  274 (307)
                      ++++.+++..     ..++.||++.   ++.++.++++.+.+.+++.
T Consensus       233 ~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~  279 (349)
T TIGR02622       233 SGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGD  279 (349)
T ss_pred             HHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCC
Confidence            9999887642     1246898863   5799999999999887553

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=9.1e-36  Score=268.92  Aligned_cols=259  Identities=17%  Similarity=0.180  Sum_probs=188.6

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCC---CC----cc----------cccCCCCCCCceEEEEcccC
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS---DS----SH----------LFALPGAGDANLRVFEADVL   69 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~---~~----~~----------~~~~~~~~~~~~~~i~~D~~   69 (307)
                      .++|+||||||+||||++|+++|+++|+ +|++++|...   ..    +.          +..+......+++++.+|++
T Consensus        45 ~~~k~VLVTGatGfIGs~Lv~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~  123 (442)
T PLN02572         45 SKKKKVMVIGGDGYCGWATALHLSKRGY-EVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDIC  123 (442)
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCC
Confidence            5678999999999999999999999999 8998875211   10    00          00000000115889999999


Q ss_pred             ChhHHHHHhc--CccEEEEeccCCCCCCCCC---hhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEecCcceeccCCCC--
Q 021819           70 DSGAVSRAVE--GCKGVFHVASPCTLEDPVD---PEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSSISAIVPNPGW--  141 (307)
Q Consensus        70 d~~~~~~~~~--~~d~vi~~a~~~~~~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~iSS~~~~~~~~~~--  141 (307)
                      |.+++.++++  ++|+|||+|+.........   +....+++|+.|+.+++++|++.+++ +||++||.. +|+....  
T Consensus       124 d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~-vYG~~~~~~  202 (442)
T PLN02572        124 DFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMG-EYGTPNIDI  202 (442)
T ss_pred             CHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecce-ecCCCCCCC
Confidence            9999999987  5899999997644322111   23456789999999999999999875 899999965 5654321  


Q ss_pred             CCcccc------cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC-------------
Q 021819          142 KGKVFD------ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY-------------  202 (307)
Q Consensus       142 ~~~~~~------E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~-------------  202 (307)
                      .+.+++      |+++.   .+..+.++|+.+|.++|.+++.+++.+|++++++||++||||++...             
T Consensus       203 ~E~~i~~~~~~~e~~~~---~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~  279 (442)
T PLN02572        203 EEGYITITHNGRTDTLP---YPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYD  279 (442)
T ss_pred             ccccccccccccccccc---CCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcc
Confidence            011111      12211   11223478999999999999999988999999999999999986431             


Q ss_pred             ---CcchHHHHHHHHcCCCCCC---CCcccCcccHHHHHHHHHHhhcCCCCCc---eEEecCCcccHHHHHHHHHHh
Q 021819          203 ---LNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQVLLFESPAASG---RYLCTNGIYQFGDFAERVSKL  270 (307)
Q Consensus       203 ---~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~dva~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~  270 (307)
                         ...+..++.+...+.++.+   +++.++|+|++|+|++++.+++++...|   .|+++++.+++.|+++.+.+.
T Consensus       280 ~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs~~~si~el~~~i~~~  356 (442)
T PLN02572        280 GVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFTEQFSVNELAKLVTKA  356 (442)
T ss_pred             cchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCCCceeHHHHHHHHHHH
Confidence               1234455666666766433   3578999999999999999998754333   588877789999999999998

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=9.4e-35  Score=256.89  Aligned_cols=265  Identities=36%  Similarity=0.600  Sum_probs=190.1

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      ..|+||||||+||||++|+++|+++|+ +|++++|+......+....... .+++++.+|++|.+++.++++++|+|||+
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~   86 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGY-TVHATLRDPAKSLHLLSKWKEG-DRLRLFRADLQEEGSFDEAVKGCDGVFHV   86 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHhhccC-CeEEEEECCCCCHHHHHHHHcCCCEEEEC
Confidence            467999999999999999999999999 8999888654433222111111 26889999999999999999999999999


Q ss_pred             ccCCCCCC--CCChhh-----hhhhhhHHHHHHHHHHHHhcC-CcEEEEecCcceeccCCCC--CCcccccCCCCchhh-
Q 021819           88 ASPCTLED--PVDPEK-----ELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGW--KGKVFDETSWTDLEY-  156 (307)
Q Consensus        88 a~~~~~~~--~~~~~~-----~~~~~n~~~~~~l~~~~~~~~-~~~~v~iSS~~~~~~~~~~--~~~~~~E~~~~~~~~-  156 (307)
                      |+......  ......     ..++.|+.++.+++++|++.+ +++||++||.++++..+..  ...+++|+.+....+ 
T Consensus        87 A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~  166 (353)
T PLN02896         87 AASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHV  166 (353)
T ss_pred             CccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHh
Confidence            99765422  112222     344556799999999998875 7899999996643322211  113567764322211 


Q ss_pred             --hcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCC----C----ccc
Q 021819          157 --CKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE----Y----HWL  226 (307)
Q Consensus       157 --~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~  226 (307)
                        +.....+|+.+|.++|.+++.+++.++++++++||++||||............+.....+.....+    .    ..+
T Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  246 (353)
T PLN02896        167 WNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGSI  246 (353)
T ss_pred             hccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCce
Confidence              111234799999999999999998899999999999999998654322111222222233322111    1    246


Q ss_pred             CcccHHHHHHHHHHhhcCCCCCceEEecCCcccHHHHHHHHHHhCCCC
Q 021819          227 GAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEF  274 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  274 (307)
                      +|+|++|+|++++.+++.+...+.|+++++++++.|+++.+.+.+|..
T Consensus       247 dfi~v~Dva~a~~~~l~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~  294 (353)
T PLN02896        247 ALVHIEDICDAHIFLMEQTKAEGRYICCVDSYDMSELINHLSKEYPCS  294 (353)
T ss_pred             eEEeHHHHHHHHHHHHhCCCcCccEEecCCCCCHHHHHHHHHHhCCCC
Confidence            999999999999999987665677888888899999999999999633

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=6.2e-35  Score=276.36  Aligned_cols=256  Identities=19%  Similarity=0.289  Sum_probs=198.3

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHC-CCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhH-HHHHhcCccEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA-VSRAVEGCKGV   84 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~-~~~~~~~~d~v   84 (307)
                      +++|+|+|||||||||++|+++|+++ |+ +|++++|..........     ..+++++.+|++|.++ ++++++++|+|
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~-~V~~l~r~~~~~~~~~~-----~~~~~~~~gDl~d~~~~l~~~l~~~D~V  386 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNY-EVYGLDIGSDAISRFLG-----HPRFHFVEGDISIHSEWIEYHIKKCDVV  386 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCc-EEEEEeCCchhhhhhcC-----CCceEEEeccccCcHHHHHHHhcCCCEE
Confidence            46789999999999999999999986 68 99999986543222111     1168899999998655 57788999999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhc-ccCcc
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK-SRKKW  163 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~-~~~~~  163 (307)
                      ||+||..............+++|+.++.+++++|++.+ ++|||+||.. +|+...  +.+++|+++..+..+. .+.+.
T Consensus       387 iHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~-vyg~~~--~~~~~E~~~~~~~~p~~~p~s~  462 (660)
T PRK08125        387 LPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSE-VYGMCT--DKYFDEDTSNLIVGPINKQRWI  462 (660)
T ss_pred             EECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchh-hcCCCC--CCCcCccccccccCCCCCCccc
Confidence            99999766533344456788999999999999999998 8999999965 565432  2467888754221111 12257


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC-------CcchHHHHHHHHcCCCCCC---CCcccCcccHHH
Q 021819          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY-------LNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKD  233 (307)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~-------~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~d  233 (307)
                      |+.+|.++|.+++.+++.++++++++||++||||+....       ...+..++.+...+++..+   +.+.++|+|++|
T Consensus       463 Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~D  542 (660)
T PRK08125        463 YSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRD  542 (660)
T ss_pred             hHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHH
Confidence            999999999999999888899999999999999976431       2346677777777766543   347899999999


Q ss_pred             HHHHHHHhhcCCC--C-CceEEecC-C-cccHHHHHHHHHHhCC
Q 021819          234 VAKAQVLLFESPA--A-SGRYLCTN-G-IYQFGDFAERVSKLFP  272 (307)
Q Consensus       234 va~~~~~~~~~~~--~-~g~~~~~~-~-~~~~~~~~~~~~~~~~  272 (307)
                      ++++++.+++++.  . ++.|++++ + .+++.|+++.+.+.++
T Consensus       543 va~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g  586 (660)
T PRK08125        543 GIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFE  586 (660)
T ss_pred             HHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhc
Confidence            9999999998753  2 34688765 3 6999999999999984

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=100.00  E-value=6.1e-34  Score=249.42  Aligned_cols=265  Identities=31%  Similarity=0.438  Sum_probs=200.8

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEecc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a~   89 (307)
                      |+|+||||+||||++|++.|+++|+ +|++++|++.....+...      +++++.+|++|.+++.++++++|+|||+|+
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~------~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~   73 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGE-EVRVLVRPTSDRRNLEGL------DVEIVEGDLRDPASLRKAVAGCRALFHVAA   73 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCC-EEEEEEecCccccccccC------CceEEEeeCCCHHHHHHHHhCCCEEEEece
Confidence            3799999999999999999999999 999999976544322211      678999999999999999999999999998


Q ss_pred             CCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHH
Q 021819           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (307)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (307)
                      ....  ....+...+++|+.++.+++++|++.+++++|++||..++.....  +.+.+|+.+..+.   ...+.|+.+|.
T Consensus        74 ~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~--~~~~~e~~~~~~~---~~~~~Y~~sK~  146 (328)
T TIGR03466        74 DYRL--WAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGD--GTPADETTPSSLD---DMIGHYKRSKF  146 (328)
T ss_pred             eccc--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCC--CCCcCccCCCCcc---cccChHHHHHH
Confidence            6432  234467889999999999999999999999999999664332222  3567888765442   22357999999


Q ss_pred             HHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCCCCCc
Q 021819          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASG  249 (307)
Q Consensus       170 ~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~~~g  249 (307)
                      ++|.+++.++.+++++++++||+.+||+....... ...++.....+......+...+++|++|+|+++..+++++..+.
T Consensus       147 ~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~  225 (328)
T TIGR03466       147 LAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTP-TGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALERGRIGE  225 (328)
T ss_pred             HHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCCc-HHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhCCCCCc
Confidence            99999999888889999999999999998643311 22333344443333334456789999999999999998765444


Q ss_pred             eEEecCCcccHHHHHHHHHHhCCCCCCCc-cccCCchHHHHH
Q 021819          250 RYLCTNGIYQFGDFAERVSKLFPEFPVHR-FVFQSPLRFILW  290 (307)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  290 (307)
                      .|+++++.+++.|+++.+.+.+ +.+.+. ..+.+....+.+
T Consensus       226 ~~~~~~~~~s~~e~~~~i~~~~-g~~~~~~~~~~~~~~~~~~  266 (328)
T TIGR03466       226 RYILGGENLTLKQILDKLAEIT-GRPAPRVKLPRWLLLPVAW  266 (328)
T ss_pred             eEEecCCCcCHHHHHHHHHHHh-CCCCCCCcCCHHHHHHHHH
Confidence            6888888899999999999999 444332 233334444333

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=2.7e-34  Score=253.09  Aligned_cols=252  Identities=16%  Similarity=0.155  Sum_probs=194.2

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC--cccccCC----CCCCCceEEEEcccCChhHHHHHhcC--c
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALP----GAGDANLRVFEADVLDSGAVSRAVEG--C   81 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~~~~~~~----~~~~~~~~~i~~D~~d~~~~~~~~~~--~   81 (307)
                      |+||||||+||||++|+++|+++|+ +|++++|+....  ..+..+.    .....+++++.+|++|.+++.+++++  +
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~   79 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGY-EVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKP   79 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCC-EEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCC
Confidence            5899999999999999999999999 999999875421  1111111    00012688999999999999999984  6


Q ss_pred             cEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc---EEEEecCcceeccCCCCCCcccccCCCCchhhhc
Q 021819           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR---RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK  158 (307)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~  158 (307)
                      |+|||+|+..............+++|+.|+.+++++|++.+++   +|||+||.. +|+...  ..+++|+.+..|.   
T Consensus        80 d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~-vyg~~~--~~~~~E~~~~~p~---  153 (343)
T TIGR01472        80 TEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSE-LYGKVQ--EIPQNETTPFYPR---  153 (343)
T ss_pred             CEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHH-hhCCCC--CCCCCCCCCCCCC---
Confidence            9999999976543333345677789999999999999988753   899999965 565433  2467888876654   


Q ss_pred             ccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC--CcchHHHHHHHHcCCCC--CC--CCcccCcccHH
Q 021819          159 SRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY--LNASCAVLQQLLQGSKD--TQ--EYHWLGAVPVK  232 (307)
Q Consensus       159 ~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~--~~--~~~~~~~i~~~  232 (307)
                         ++|+.||..+|.+++.+++.+++++++.|+.++|||.....  ...+..++.+...+.+.  ..  +++.++|+|++
T Consensus       154 ---~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~  230 (343)
T TIGR01472       154 ---SPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAK  230 (343)
T ss_pred             ---ChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHH
Confidence               68999999999999999888899999999999999874322  22344455556556532  22  45899999999


Q ss_pred             HHHHHHHHhhcCCCCCceEEec-CCcccHHHHHHHHHHhCC
Q 021819          233 DVAKAQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFP  272 (307)
Q Consensus       233 dva~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~  272 (307)
                      |+|++++.+++++. .+.||++ ++++++.|+++.+.+.++
T Consensus       231 D~a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g  270 (343)
T TIGR01472       231 DYVEAMWLMLQQDK-PDDYVIATGETHSVREFVEVSFEYIG  270 (343)
T ss_pred             HHHHHHHHHHhcCC-CccEEecCCCceeHHHHHHHHHHHcC
Confidence            99999999998754 3678765 578999999999999983

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=100.00  E-value=4.3e-34  Score=252.81  Aligned_cols=252  Identities=19%  Similarity=0.206  Sum_probs=191.4

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCC--CCcccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS--DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVF   85 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~vi   85 (307)
                      |+|+|||||||||++|++.|+++|+..|++.++...  .......+..  ..+++++.+|++|.+++.++++  ++|+||
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   78 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSD--SERYVFEHADICDRAELDRIFAQHQPDAVM   78 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhccc--CCceEEEEecCCCHHHHHHHHHhcCCCEEE
Confidence            389999999999999999999999745666655321  1111211111  1157889999999999999986  489999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhc---------CCcEEEEecCcceeccCCCCC--------Cccccc
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF---------GVRRVVVTSSISAIVPNPGWK--------GKVFDE  148 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~iSS~~~~~~~~~~~--------~~~~~E  148 (307)
                      |+|+..............+++|+.|+.+++++|++.         ++++||++||.. +|+.....        ..+++|
T Consensus        79 h~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~-vyg~~~~~~~~~~~~~~~~~~E  157 (352)
T PRK10084         79 HLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDE-VYGDLPHPDEVENSEELPLFTE  157 (352)
T ss_pred             ECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchh-hcCCCCccccccccccCCCccc
Confidence            999975443333456789999999999999999874         456899999965 45432110        124677


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC---CCcc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHW  225 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~  225 (307)
                      +++..|.      +.|+.+|.++|.+++.+++.++++++++||+.||||..... ..+..++.....+.++.+   +++.
T Consensus       158 ~~~~~p~------~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~  230 (352)
T PRK10084        158 TTAYAPS------SPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQI  230 (352)
T ss_pred             cCCCCCC------ChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCcc-chHHHHHHHHhcCCCeEEeCCCCeE
Confidence            7765554      68999999999999999888899999999999999985332 345556666666655332   4578


Q ss_pred             cCcccHHHHHHHHHHhhcCCCCCceEEecC-CcccHHHHHHHHHHhC
Q 021819          226 LGAVPVKDVAKAQVLLFESPAASGRYLCTN-GIYQFGDFAERVSKLF  271 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~  271 (307)
                      ++++|++|+|++++.+++++...+.||+++ +..++.++++.+.+.+
T Consensus       231 ~~~v~v~D~a~a~~~~l~~~~~~~~yni~~~~~~s~~~~~~~i~~~~  277 (352)
T PRK10084        231 RDWLYVEDHARALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLL  277 (352)
T ss_pred             EeeEEHHHHHHHHHHHHhcCCCCceEEeCCCCcCcHHHHHHHHHHHh
Confidence            999999999999999998765556898864 6789999999999888

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=4.3e-34  Score=256.98  Aligned_cols=251  Identities=23%  Similarity=0.287  Sum_probs=190.0

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC-cccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      +.|+|+|||||||||++|+++|+++|+ +|++++|..... .....+..  ..+++++.+|+.+..     +.++|+|||
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~-~V~~ldr~~~~~~~~~~~~~~--~~~~~~~~~Di~~~~-----~~~~D~ViH  190 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGD-EVIVIDNFFTGRKENLVHLFG--NPRFELIRHDVVEPI-----LLEVDQIYH  190 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCCCccHhHhhhhcc--CCceEEEECcccccc-----ccCCCEEEE
Confidence            346999999999999999999999999 999998853221 11111111  116788889987643     468999999


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHH
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (307)
                      +|+.........+..+.+++|+.++.+++++|++.+. +|||+||.. +|+...  ..+.+|+.+.... +..+.+.|+.
T Consensus       191 lAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~-VYg~~~--~~p~~E~~~~~~~-p~~p~s~Yg~  265 (436)
T PLN02166        191 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSE-VYGDPL--EHPQKETYWGNVN-PIGERSCYDE  265 (436)
T ss_pred             CceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHH-HhCCCC--CCCCCccccccCC-CCCCCCchHH
Confidence            9987544333334578899999999999999999885 899999955 566543  2467776432111 1112367999


Q ss_pred             HHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC-CcchHHHHHHHHcCCCCCC-C--CcccCcccHHHHHHHHHHhh
Q 021819          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY-LNASCAVLQQLLQGSKDTQ-E--YHWLGAVPVKDVAKAQVLLF  242 (307)
Q Consensus       167 sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~-~--~~~~~~i~~~dva~~~~~~~  242 (307)
                      +|..+|.+++.+++..+++++++||++||||..... ...+..++.++..+.+..+ +  .+.++|+|++|+++++..++
T Consensus       266 SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~  345 (436)
T PLN02166        266 GKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALM  345 (436)
T ss_pred             HHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHH
Confidence            999999999999888899999999999999986432 2345677777777776543 3  36899999999999999998


Q ss_pred             cCCCCCceEEec-CCcccHHHHHHHHHHhCC
Q 021819          243 ESPAASGRYLCT-NGIYQFGDFAERVSKLFP  272 (307)
Q Consensus       243 ~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~  272 (307)
                      +.. ..|.||++ ++.+++.|+++.+.+.++
T Consensus       346 ~~~-~~giyNIgs~~~~Si~ela~~I~~~~g  375 (436)
T PLN02166        346 EGE-HVGPFNLGNPGEFTMLELAEVVKETID  375 (436)
T ss_pred             hcC-CCceEEeCCCCcEeHHHHHHHHHHHhC
Confidence            764 35788875 567999999999999983

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=100.00  E-value=5.2e-34  Score=271.33  Aligned_cols=254  Identities=21%  Similarity=0.242  Sum_probs=196.0

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHC--CCCeEEEEeCCCC--CCcccccCCCCCCCceEEEEcccCChhHHHHHh--cCc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGS--DSSHLFALPGAGDANLRVFEADVLDSGAVSRAV--EGC   81 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~--~~~   81 (307)
                      ++|+|||||||||||++|++.|+++  ++ +|++++|...  ....+....  ...+++++.+|++|.+.+..++  .++
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~-~V~~~d~~~~~~~~~~l~~~~--~~~~v~~~~~Dl~d~~~~~~~~~~~~~   81 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDY-KIVVLDKLDYCSNLKNLNPSK--SSPNFKFVKGDIASADLVNYLLITEGI   81 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCC-EEEEEeCCCccchhhhhhhcc--cCCCeEEEECCCCChHHHHHHHhhcCC
Confidence            4679999999999999999999998  56 8988887431  111111110  1127899999999998887765  579


Q ss_pred             cEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcC-CcEEEEecCcceeccCCCCC-CcccccCCCCchhhhcc
Q 021819           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWK-GKVFDETSWTDLEYCKS  159 (307)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~iSS~~~~~~~~~~~-~~~~~E~~~~~~~~~~~  159 (307)
                      |+|||+|+............+.+++|+.++.+++++|++.+ +++|||+||.. +|+..... ....+|+++..|.    
T Consensus        82 D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~-vyg~~~~~~~~~~~E~~~~~p~----  156 (668)
T PLN02260         82 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDE-VYGETDEDADVGNHEASQLLPT----  156 (668)
T ss_pred             CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchH-HhCCCccccccCccccCCCCCC----
Confidence            99999999866533334456788999999999999999987 88999999965 55543321 1123566554443    


Q ss_pred             cCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC---CCcccCcccHHHHHH
Q 021819          160 RKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAK  236 (307)
Q Consensus       160 ~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~dva~  236 (307)
                        ++|+.+|..+|.+++.+++.++++++++||++||||..... ..+..++.....+.++.+   +.+.++|+|++|+|+
T Consensus       157 --~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~-~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~  233 (668)
T PLN02260        157 --NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-KLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAE  233 (668)
T ss_pred             --CCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcc-cHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHH
Confidence              68999999999999998888899999999999999986432 345566666666666544   346889999999999


Q ss_pred             HHHHhhcCCCCCceEEecC-CcccHHHHHHHHHHhCC
Q 021819          237 AQVLLFESPAASGRYLCTN-GIYQFGDFAERVSKLFP  272 (307)
Q Consensus       237 ~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~  272 (307)
                      ++..++++....+.||+++ +.+++.|+++.+.+.++
T Consensus       234 a~~~~l~~~~~~~vyni~~~~~~s~~el~~~i~~~~g  270 (668)
T PLN02260        234 AFEVVLHKGEVGHVYNIGTKKERRVIDVAKDICKLFG  270 (668)
T ss_pred             HHHHHHhcCCCCCEEEECCCCeeEHHHHHHHHHHHhC
Confidence            9999998776667898864 67999999999999983

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=2.5e-33  Score=248.55  Aligned_cols=250  Identities=17%  Similarity=0.153  Sum_probs=188.2

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      +.|+|+|||||||||++|++.|+++|+ +|++++|.....  ....   .. ...++.+|++|.+.+..+++++|+|||+
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~-~V~~v~r~~~~~--~~~~---~~-~~~~~~~Dl~d~~~~~~~~~~~D~Vih~   92 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGH-YIIASDWKKNEH--MSED---MF-CHEFHLVDLRVMENCLKVTKGVDHVFNL   92 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCC-EEEEEEeccccc--cccc---cc-cceEEECCCCCHHHHHHHHhCCCEEEEc
Confidence            357999999999999999999999999 999999854321  1110   00 3567889999999998888999999999


Q ss_pred             ccCCCCC-CCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCC--CCcccccCC--CCchhhhcccCc
Q 021819           88 ASPCTLE-DPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW--KGKVFDETS--WTDLEYCKSRKK  162 (307)
Q Consensus        88 a~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~--~~~~~~E~~--~~~~~~~~~~~~  162 (307)
                      |+..... .........+..|+.++.+++++|++.++++|||+||.. +|+....  ...++.|++  +..|      .+
T Consensus        93 Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~-vYg~~~~~~~~~~~~E~~~~p~~p------~s  165 (370)
T PLN02695         93 AADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSAC-IYPEFKQLETNVSLKESDAWPAEP------QD  165 (370)
T ss_pred             ccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchh-hcCCccccCcCCCcCcccCCCCCC------CC
Confidence            9865321 111233456788999999999999999999999999965 5554321  112456654  2333      36


Q ss_pred             cHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC---CcchHHHHHHHHcC-CCCCC---CCcccCcccHHHHH
Q 021819          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQG-SKDTQ---EYHWLGAVPVKDVA  235 (307)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~---~~~~~~~~~~~~~~-~~~~~---~~~~~~~i~~~dva  235 (307)
                      .|+.+|..+|.+++.+++.++++++++||+++|||.....   ......++.+...+ .++.+   +++.++|+|++|++
T Consensus       166 ~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a  245 (370)
T PLN02695        166 AYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECV  245 (370)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHH
Confidence            8999999999999998888899999999999999975422   12344555555543 33332   34789999999999


Q ss_pred             HHHHHhhcCCCCCceEEec-CCcccHHHHHHHHHHhCC
Q 021819          236 KAQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFP  272 (307)
Q Consensus       236 ~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~  272 (307)
                      ++++.+++++ ..+.||++ ++.+++.|+++.+.+..+
T Consensus       246 ~ai~~~~~~~-~~~~~nv~~~~~~s~~el~~~i~~~~g  282 (370)
T PLN02695        246 EGVLRLTKSD-FREPVNIGSDEMVSMNEMAEIALSFEN  282 (370)
T ss_pred             HHHHHHHhcc-CCCceEecCCCceeHHHHHHHHHHHhC
Confidence            9999988765 34678876 467999999999998873

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=1.8e-33  Score=253.44  Aligned_cols=250  Identities=22%  Similarity=0.250  Sum_probs=187.9

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC-cccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      +.|+|||||||||||++|++.|+++|+ +|++++|..... +......  ...+++++.+|+.++.     +.++|+|||
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~-~V~~ld~~~~~~~~~~~~~~--~~~~~~~i~~D~~~~~-----l~~~D~ViH  189 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGD-SVIVVDNFFTGRKENVMHHF--SNPNFELIRHDVVEPI-----LLEVDQIYH  189 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcC-EEEEEeCCCccchhhhhhhc--cCCceEEEECCccChh-----hcCCCEEEE
Confidence            457999999999999999999999999 899988743211 1111110  1116788899987753     457999999


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHH
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (307)
                      +|+.........+..+.+++|+.++.+++++|++.++ +|||+||.. +|+...  ..+.+|+.+.... +....+.|+.
T Consensus       190 lAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~-VYg~~~--~~p~~E~~~~~~~-P~~~~s~Y~~  264 (442)
T PLN02206        190 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSE-VYGDPL--QHPQVETYWGNVN-PIGVRSCYDE  264 (442)
T ss_pred             eeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChH-HhCCCC--CCCCCccccccCC-CCCccchHHH
Confidence            9987554333345678899999999999999999985 899999965 565433  2456676532111 1112367999


Q ss_pred             HHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC-CcchHHHHHHHHcCCCCCC---CCcccCcccHHHHHHHHHHhh
Q 021819          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY-LNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQVLLF  242 (307)
Q Consensus       167 sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~dva~~~~~~~  242 (307)
                      +|.++|.++..+++.++++++++||+++|||..... ...+..++.+...+.++.+   +++.++|+|++|+|++++.++
T Consensus       265 SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~  344 (442)
T PLN02206        265 GKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLM  344 (442)
T ss_pred             HHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHH
Confidence            999999999998888899999999999999975432 2345567777777666543   346889999999999999998


Q ss_pred             cCCCCCceEEec-CCcccHHHHHHHHHHhC
Q 021819          243 ESPAASGRYLCT-NGIYQFGDFAERVSKLF  271 (307)
Q Consensus       243 ~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~  271 (307)
                      ++. ..|.||++ ++.+++.|+++.+.+.+
T Consensus       345 e~~-~~g~yNIgs~~~~sl~Elae~i~~~~  373 (442)
T PLN02206        345 EGE-HVGPFNLGNPGEFTMLELAKVVQETI  373 (442)
T ss_pred             hcC-CCceEEEcCCCceeHHHHHHHHHHHh
Confidence            765 34688876 57799999999999988

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=100.00  E-value=3.7e-33  Score=242.96  Aligned_cols=245  Identities=29%  Similarity=0.363  Sum_probs=196.6

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCc-cEEEEecc
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC-KGVFHVAS   89 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-d~vi~~a~   89 (307)
                      +|||||||||||++|++.|+++|+ +|++++|......... .      ++.++.+|++|.+...++++.+ |+|||+|+
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-~------~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa   73 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGH-DVRGLDRLRDGLDPLL-S------GVEFVVLDLTDRDLVDELAKGVPDAVIHLAA   73 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCC-eEEEEeCCCccccccc-c------ccceeeecccchHHHHHHHhcCCCEEEEccc
Confidence            599999999999999999999999 9999999766554433 1      6789999999998888888888 99999999


Q ss_pred             CCCCCCCCC-hhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccC-CCCchhhhcccCccHHHH
Q 021819           90 PCTLEDPVD-PEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDET-SWTDLEYCKSRKKWYPVS  167 (307)
Q Consensus        90 ~~~~~~~~~-~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~-~~~~~~~~~~~~~~y~~s  167 (307)
                      ......... .+.+.+.+|+.++.+++++|++.++++|||.||.+.++.. . ...+++|+ .+..|.      ++|+.+
T Consensus        74 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~-~-~~~~~~E~~~~~~p~------~~Yg~s  145 (314)
T COG0451          74 QSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGD-P-PPLPIDEDLGPPRPL------NPYGVS  145 (314)
T ss_pred             cCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCC-C-CCCCcccccCCCCCC------CHHHHH
Confidence            876533222 3456899999999999999999899999997776655554 2 23478888 444443      479999


Q ss_pred             HHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCC--cchHHHHHHHHcCCC-CCCC---CcccCcccHHHHHHHHHHh
Q 021819          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSK-DTQE---YHWLGAVPVKDVAKAQVLL  241 (307)
Q Consensus       168 K~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~-~~~~---~~~~~~i~~~dva~~~~~~  241 (307)
                      |.++|.+++.+.+.++++++++||++||||+.....  .....++.....+.+ ....   ...++++|++|++++++.+
T Consensus       146 K~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  225 (314)
T COG0451         146 KLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLA  225 (314)
T ss_pred             HHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHH
Confidence            999999999998878999999999999999987642  133344555566665 3332   3567999999999999999


Q ss_pred             hcCCCCCceEEecCC--cccHHHHHHHHHHhCC
Q 021819          242 FESPAASGRYLCTNG--IYQFGDFAERVSKLFP  272 (307)
Q Consensus       242 ~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~  272 (307)
                      ++++... .|+++++  ..++.++++.+.+..+
T Consensus       226 ~~~~~~~-~~ni~~~~~~~~~~e~~~~~~~~~~  257 (314)
T COG0451         226 LENPDGG-VFNIGSGTAEITVRELAEAVAEAVG  257 (314)
T ss_pred             HhCCCCc-EEEeCCCCCcEEHHHHHHHHHHHhC
Confidence            9988776 8887764  7999999999999983

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=100.00  E-value=3.4e-33  Score=243.71  Aligned_cols=235  Identities=19%  Similarity=0.143  Sum_probs=181.9

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCC-CCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      ++|+|+||||+||||++|++.|+++| ..+|++++|+......+..... . .++.++.+|++|.+++.++++++|+|||
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~-~-~~~~~v~~Dl~d~~~l~~~~~~iD~Vih   80 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP-A-PCLRFFIGDVRDKERLTRALRGVDYVVH   80 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC-C-CcEEEEEccCCCHHHHHHHHhcCCEEEE
Confidence            46799999999999999999999986 2389888886543322211111 1 1688999999999999999999999999


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHH
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (307)
                      +||............+.+++|+.|+.+++++|.+.++++||++||.....                 |      .++|+.
T Consensus        81 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~~-----------------p------~~~Y~~  137 (324)
T TIGR03589        81 AAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAAN-----------------P------INLYGA  137 (324)
T ss_pred             CcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCC-----------------C------CCHHHH
Confidence            99975443333445689999999999999999999989999999843210                 1      157999


Q ss_pred             HHHHHHHHHHHHH---HhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCC-CCCC--CCcccCcccHHHHHHHHHH
Q 021819          167 SKTLAEKAAWEFA---EKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS-KDTQ--EYHWLGAVPVKDVAKAQVL  240 (307)
Q Consensus       167 sK~~~e~~~~~~~---~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~i~~~dva~~~~~  240 (307)
                      +|.++|.+++.++   +..|++++++||++||||..    ..+..+......+. +..+  +.+.++|+|++|++++++.
T Consensus       138 sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~----~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~  213 (324)
T TIGR03589       138 TKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRG----SVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLK  213 (324)
T ss_pred             HHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCC----CcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHH
Confidence            9999999987754   35699999999999999863    24455555555554 3333  4577899999999999999


Q ss_pred             hhcCCCCCceEEecCCcccHHHHHHHHHHhC
Q 021819          241 LFESPAASGRYLCTNGIYQFGDFAERVSKLF  271 (307)
Q Consensus       241 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  271 (307)
                      ++++......|+.++...++.|+++.+.+..
T Consensus       214 al~~~~~~~~~~~~~~~~sv~el~~~i~~~~  244 (324)
T TIGR03589       214 SLERMLGGEIFVPKIPSMKITDLAEAMAPEC  244 (324)
T ss_pred             HHhhCCCCCEEccCCCcEEHHHHHHHHHhhC
Confidence            9987533345766667799999999999877

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=100.00  E-value=4.1e-34  Score=238.94  Aligned_cols=228  Identities=29%  Similarity=0.368  Sum_probs=188.0

Q ss_pred             EEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCc--cEEEEecc
Q 021819           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC--KGVFHVAS   89 (307)
Q Consensus        12 ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~--d~vi~~a~   89 (307)
                      |+|||||||||++|+++|+++|+ .|+.+.|+...........     +++++.+|+.|.+.+.++++..  |+|||+|+
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~-----~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~   74 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGH-EVIVLSRSSNSESFEEKKL-----NVEFVIGDLTDKEQLEKLLEKANIDVVIHLAA   74 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTT-EEEEEESCSTGGHHHHHHT-----TEEEEESETTSHHHHHHHHHHHTESEEEEEBS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCC-ccccccccccccccccccc-----eEEEEEeeccccccccccccccCceEEEEeec
Confidence            79999999999999999999999 8888888766554322211     6889999999999999999865  99999999


Q ss_pred             CCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHH
Q 021819           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (307)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (307)
                      ..............++.|+.++.+++++|++.+++++|++|| ..+|+...  ..+++|+++..+.      ++|+.+|.
T Consensus        75 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS-~~~y~~~~--~~~~~e~~~~~~~------~~Y~~~K~  145 (236)
T PF01370_consen   75 FSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSS-ASVYGDPD--GEPIDEDSPINPL------SPYGASKR  145 (236)
T ss_dssp             SSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-GGGGTSSS--SSSBETTSGCCHS------SHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccc-cccccccc--ccccccccccccc------cccccccc
Confidence            753211123457889999999999999999999999999999 44566553  3678998877554      67999999


Q ss_pred             HHHHHHHHHHHhcCCcEEEEecCceeCCC--CCCCCcchHHHHHHHHcCCCCCC---CCcccCcccHHHHHHHHHHhhcC
Q 021819          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPL--MQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQVLLFES  244 (307)
Q Consensus       170 ~~e~~~~~~~~~~~i~~~ivrp~~v~g~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~dva~~~~~~~~~  244 (307)
                      .+|++++.+.++++++++++||+++|||.  .......+..++.++..+++...   +++.++++|++|+|++++.++++
T Consensus       146 ~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  225 (236)
T PF01370_consen  146 AAEELLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALEN  225 (236)
T ss_dssp             HHHHHHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhC
Confidence            99999999998889999999999999999  12224677788888888886544   45899999999999999999999


Q ss_pred             CC-CCceEEec
Q 021819          245 PA-ASGRYLCT  254 (307)
Q Consensus       245 ~~-~~g~~~~~  254 (307)
                      +. .++.||++
T Consensus       226 ~~~~~~~yNig  236 (236)
T PF01370_consen  226 PKAAGGIYNIG  236 (236)
T ss_dssp             SCTTTEEEEES
T ss_pred             CCCCCCEEEeC
Confidence            88 55678863

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=4.7e-33  Score=244.94  Aligned_cols=253  Identities=15%  Similarity=0.143  Sum_probs=194.2

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC--cccccCC---CCCCCceEEEEcccCChhHHHHHhcC-
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALP---GAGDANLRVFEADVLDSGAVSRAVEG-   80 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~~~~~~~---~~~~~~~~~i~~D~~d~~~~~~~~~~-   80 (307)
                      .++|+||||||+||||++|++.|+++|+ +|++++|+....  ..+..+.   .....++.++.+|++|.+++.++++. 
T Consensus         4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          4 PPRKVALITGITGQDGSYLTEFLLSKGY-EVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            3467999999999999999999999999 899998865321  1121111   00112588999999999999998874 


Q ss_pred             -ccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc-----EEEEecCcceeccCCCCCCcccccCCCCch
Q 021819           81 -CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-----RVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (307)
Q Consensus        81 -~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~  154 (307)
                       +|+|||+|+..........+...+++|+.++.+++++|.+.+++     +||++||.+ +|+...   .+++|+++..|
T Consensus        83 ~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~-vyg~~~---~~~~E~~~~~p  158 (340)
T PLN02653         83 KPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSE-MYGSTP---PPQSETTPFHP  158 (340)
T ss_pred             CCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHH-HhCCCC---CCCCCCCCCCC
Confidence             69999999976543333445677899999999999999988764     899999854 565433   36788877665


Q ss_pred             hhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC--CcchHHHHHHHHcCCCCCC----CCcccCc
Q 021819          155 EYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY--LNASCAVLQQLLQGSKDTQ----EYHWLGA  228 (307)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~----~~~~~~~  228 (307)
                      .      +.|+.+|.++|.+++.+++.++++++..|+.++|||.....  ...+..++.++..+.+..+    +++.++|
T Consensus       159 ~------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~  232 (340)
T PLN02653        159 R------SPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDW  232 (340)
T ss_pred             C------ChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecc
Confidence            4      68999999999999999888899999999999999864332  1223344445556654322    3578999


Q ss_pred             ccHHHHHHHHHHhhcCCCCCceEEec-CCcccHHHHHHHHHHhC
Q 021819          229 VPVKDVAKAQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLF  271 (307)
Q Consensus       229 i~~~dva~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~  271 (307)
                      +|++|+|++++.++++.. .+.||++ ++++++.|+++.+.+..
T Consensus       233 i~v~D~a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~  275 (340)
T PLN02653        233 GFAGDYVEAMWLMLQQEK-PDDYVVATEESHTVEEFLEEAFGYV  275 (340)
T ss_pred             eeHHHHHHHHHHHHhcCC-CCcEEecCCCceeHHHHHHHHHHHc
Confidence            999999999999998754 4678765 67899999999999998

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=5.1e-33  Score=242.35  Aligned_cols=251  Identities=20%  Similarity=0.229  Sum_probs=194.0

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCC--CCcccccCCCCCCCceEEEEcccCChhHHHHHhcC--ccEEE
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGS--DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGVF   85 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~--~d~vi   85 (307)
                      +|+||||||+||++|+++|+++|. .+|++++|...  ....+..+.. . .+++++.+|++|++++.+++++  +|+||
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi   78 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED-N-PRYRFVKGDIGDRELVSRLFTEHQPDAVV   78 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc-C-CCcEEEEcCCcCHHHHHHHHhhcCCCEEE
Confidence            589999999999999999999872 28888876321  1111111111 1 1678899999999999999987  89999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccH
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (307)
                      |+|+..............+++|+.++.+++++|.+.+.+ ++|++||.. +|+.... ..+.+|+++..+.      +.|
T Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~-v~g~~~~-~~~~~e~~~~~~~------~~Y  150 (317)
T TIGR01181        79 HFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDE-VYGDLEK-GDAFTETTPLAPS------SPY  150 (317)
T ss_pred             EcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccc-eeCCCCC-CCCcCCCCCCCCC------Cch
Confidence            999976543333455678999999999999999987543 899999965 4543332 1257777765553      689


Q ss_pred             HHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC---CCcccCcccHHHHHHHHHHh
Q 021819          165 PVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQVLL  241 (307)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~dva~~~~~~  241 (307)
                      +.+|..+|.+++.++++.+++++++||+.+||+..... ..+..++.....+.++..   +.+.++|+|++|+++++..+
T Consensus       151 ~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~  229 (317)
T TIGR01181       151 SASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPE-KLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLV  229 (317)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcc-cHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHH
Confidence            99999999999998888899999999999999975432 445566777777765432   34688999999999999999


Q ss_pred             hcCCCCCceEEecC-CcccHHHHHHHHHHhCC
Q 021819          242 FESPAASGRYLCTN-GIYQFGDFAERVSKLFP  272 (307)
Q Consensus       242 ~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~  272 (307)
                      +++...++.|++++ +.+++.|+++.+.+.++
T Consensus       230 ~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~  261 (317)
T TIGR01181       230 LEKGRVGETYNIGGGNERTNLEVVETILELLG  261 (317)
T ss_pred             HcCCCCCceEEeCCCCceeHHHHHHHHHHHhC
Confidence            98766556898764 67999999999999994

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02240 UDP-glucose 4-epimerase

Probab=100.00  E-value=1.2e-32  Score=243.55  Aligned_cols=259  Identities=18%  Similarity=0.181  Sum_probs=192.7

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCc----ccccCCCCCCCceEEEEcccCChhHHHHHhc--Ccc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS----HLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCK   82 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~----~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d   82 (307)
                      +|+|+|||||||||++|+++|+++|+ +|++++|......    ...........++.++.+|++|++++.++++  ++|
T Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d   83 (352)
T PLN02240          5 GRTILVTGGAGYIGSHTVLQLLLAGY-KVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFD   83 (352)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCC
Confidence            67999999999999999999999999 8999887532211    1111110011167889999999999998886  689


Q ss_pred             EEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCc
Q 021819           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (307)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (307)
                      +|||+|+..........+...+++|+.++.+++++|++.++++||++||. ++|+...  +.+++|+++..+.      +
T Consensus        84 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~-~vyg~~~--~~~~~E~~~~~~~------~  154 (352)
T PLN02240         84 AVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSA-TVYGQPE--EVPCTEEFPLSAT------N  154 (352)
T ss_pred             EEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccH-HHhCCCC--CCCCCCCCCCCCC------C
Confidence            99999997543333345678899999999999999999988999999995 4565433  3578898876664      6


Q ss_pred             cHHHHHHHHHHHHHHHHHh-cCCcEEEEecCceeCCCCCC--------CCcchHHHHHHHHcCCCCC-----------CC
Q 021819          163 WYPVSKTLAEKAAWEFAEK-HGVDVVAIHPATCLGPLMQP--------YLNASCAVLQQLLQGSKDT-----------QE  222 (307)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~-~~i~~~ivrp~~v~g~~~~~--------~~~~~~~~~~~~~~~~~~~-----------~~  222 (307)
                      .|+.+|.++|.+++.+++. .+++++++|++++||+....        ....+..++..+..+....           .+
T Consensus       155 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g  234 (352)
T PLN02240        155 PYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDG  234 (352)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCC
Confidence            8999999999999988655 58999999999999975321        1122334455555443211           23


Q ss_pred             CcccCcccHHHHHHHHHHhhcCC----CCC-ceEEec-CCcccHHHHHHHHHHhCCCCCCCc
Q 021819          223 YHWLGAVPVKDVAKAQVLLFESP----AAS-GRYLCT-NGIYQFGDFAERVSKLFPEFPVHR  278 (307)
Q Consensus       223 ~~~~~~i~~~dva~~~~~~~~~~----~~~-g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  278 (307)
                      .+.++|+|++|+|++++.++++.    ... +.||++ ++++++.|+++.+.+.+ +.+.+.
T Consensus       235 ~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~-g~~~~~  295 (352)
T PLN02240        235 TGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKAS-GKKIPL  295 (352)
T ss_pred             CEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHh-CCCCCc
Confidence            47789999999999998888642    232 478875 67899999999999999 444343

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=100.00  E-value=7.2e-33  Score=239.08  Aligned_cols=226  Identities=17%  Similarity=0.135  Sum_probs=174.6

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEEEEe
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFHV   87 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~vi~~   87 (307)
                      |+||||||+||||++|++.|+++|  +|++++|...                 .+.+|++|.+++.++++  ++|+||||
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g--~V~~~~~~~~-----------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~   61 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG--NLIALDVHST-----------------DYCGDFSNPEGVAETVRKIRPDVIVNA   61 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC--CEEEeccccc-----------------cccCCCCCHHHHHHHHHhcCCCEEEEC
Confidence            389999999999999999999998  4777777421                 23489999999999887  58999999


Q ss_pred             ccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHH
Q 021819           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (307)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (307)
                      |+..........+...+.+|+.++.+++++|++.+. ++||+||.. +|+...  ..+++|+++..|.      ++|+.+
T Consensus        62 Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~-Vy~~~~--~~p~~E~~~~~P~------~~Yg~s  131 (299)
T PRK09987         62 AAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDY-VFPGTG--DIPWQETDATAPL------NVYGET  131 (299)
T ss_pred             CccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccce-EECCCC--CCCcCCCCCCCCC------CHHHHH
Confidence            998765444455677889999999999999999985 799999955 555433  2578898876664      689999


Q ss_pred             HHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC-CC----cccCcccHHHHHHHHHHhh
Q 021819          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ-EY----HWLGAVPVKDVAKAQVLLF  242 (307)
Q Consensus       168 K~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~i~~~dva~~~~~~~  242 (307)
                      |.++|.+++.+    ..+.+++||+++|||...   +++..++.....+.++.+ ++    +.+.+...+|++.++..++
T Consensus       132 K~~~E~~~~~~----~~~~~ilR~~~vyGp~~~---~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~  204 (299)
T PRK09987        132 KLAGEKALQEH----CAKHLIFRTSWVYAGKGN---NFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVAL  204 (299)
T ss_pred             HHHHHHHHHHh----CCCEEEEecceecCCCCC---CHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhh
Confidence            99999998744    457899999999999753   345566666666655443 32    3344556677888888777


Q ss_pred             cCCCCCceEEec-CCcccHHHHHHHHHHhC
Q 021819          243 ESPAASGRYLCT-NGIYQFGDFAERVSKLF  271 (307)
Q Consensus       243 ~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~  271 (307)
                      +.+...|.||++ ++..|+.|+++.+.+.+
T Consensus       205 ~~~~~~giyni~~~~~~s~~e~~~~i~~~~  234 (299)
T PRK09987        205 NKPEVAGLYHLVASGTTTWHDYAALVFEEA  234 (299)
T ss_pred             ccCCCCCeEEeeCCCCccHHHHHHHHHHHH
Confidence            665555789876 56799999999997753

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=100.00  E-value=1.2e-32  Score=239.23  Aligned_cols=237  Identities=19%  Similarity=0.202  Sum_probs=173.3

Q ss_pred             EEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCCh---hH-HHHHhc-----Ccc
Q 021819           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS---GA-VSRAVE-----GCK   82 (307)
Q Consensus        12 ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~---~~-~~~~~~-----~~d   82 (307)
                      |+|||||||||++|+++|+++|+ +++++.|+.......          ..+..+|++|.   ++ ++.+++     ++|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~-~~v~~~~~~~~~~~~----------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d   70 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGI-TDILVVDNLKDGTKF----------VNLVDLDIADYMDKEDFLAQIMAGDDFGDIE   70 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCC-ceEEEecCCCcchHH----------HhhhhhhhhhhhhHHHHHHHHhcccccCCcc
Confidence            79999999999999999999998 666655543221111          11233455543   33 233332     689


Q ss_pred             EEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCc
Q 021819           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (307)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (307)
                      +|||+||..... . ......++.|+.++.+++++|++.++ +|||+||.. +|+...  +.+.+|+.+..|.      +
T Consensus        71 ~Vih~A~~~~~~-~-~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~-vyg~~~--~~~~~E~~~~~p~------~  138 (308)
T PRK11150         71 AIFHEGACSSTT-E-WDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAA-TYGGRT--DDFIEEREYEKPL------N  138 (308)
T ss_pred             EEEECceecCCc-C-CChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchH-HhCcCC--CCCCccCCCCCCC------C
Confidence            999999864432 1 23346789999999999999999987 699999965 555432  2456777665554      6


Q ss_pred             cHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCC---cchHHHHHHHHcCCCCC-C-C--CcccCcccHHHHH
Q 021819          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL---NASCAVLQQLLQGSKDT-Q-E--YHWLGAVPVKDVA  235 (307)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~-~-~--~~~~~~i~~~dva  235 (307)
                      +|+.+|.++|++++.++...+++++++||++||||......   .....+..++..+.... . +  +..++|+|++|+|
T Consensus       139 ~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a  218 (308)
T PRK11150        139 VYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVA  218 (308)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHH
Confidence            79999999999999988888999999999999999864421   12334445666665432 2 2  3578999999999


Q ss_pred             HHHHHhhcCCCCCceEEec-CCcccHHHHHHHHHHhCC
Q 021819          236 KAQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFP  272 (307)
Q Consensus       236 ~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~  272 (307)
                      ++++.+++... .|.||++ ++++++.|+++.+.+.++
T Consensus       219 ~a~~~~~~~~~-~~~yni~~~~~~s~~el~~~i~~~~~  255 (308)
T PRK11150        219 AVNLWFWENGV-SGIFNCGTGRAESFQAVADAVLAYHK  255 (308)
T ss_pred             HHHHHHHhcCC-CCeEEcCCCCceeHHHHHHHHHHHhC
Confidence            99999988643 4689876 567999999999999984

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=100.00  E-value=7.4e-32  Score=237.27  Aligned_cols=257  Identities=19%  Similarity=0.172  Sum_probs=187.5

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCc-ccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEEEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS-HLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~vi~   86 (307)
                      |+|+|||||||||++|++.|+++|+ +|++++|...... ....+......++.++.+|++|.+++.++++  ++|+|||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh   79 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGH-DVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIH   79 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCC-eEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEE
Confidence            3799999999999999999999999 8988876432221 1111100011156788999999999998886  6899999


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCC-chhhhcccCccHH
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT-DLEYCKSRKKWYP  165 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~-~~~~~~~~~~~y~  165 (307)
                      +|+..............+++|+.++.+++++|++.++++||++||.. +|+...  ..+++|+++. .|.      ..|+
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~-~yg~~~--~~~~~E~~~~~~p~------~~Y~  150 (338)
T PRK10675         80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSAT-VYGDQP--KIPYVESFPTGTPQ------SPYG  150 (338)
T ss_pred             CCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHH-hhCCCC--CCccccccCCCCCC------ChhH
Confidence            99876543223345678999999999999999999999999999965 555333  2567888764 332      6799


Q ss_pred             HHHHHHHHHHHHHHHhc-CCcEEEEecCceeCCCCCCC--------CcchHHHHHHHHcCCC--C-------C--CCCcc
Q 021819          166 VSKTLAEKAAWEFAEKH-GVDVVAIHPATCLGPLMQPY--------LNASCAVLQQLLQGSK--D-------T--QEYHW  225 (307)
Q Consensus       166 ~sK~~~e~~~~~~~~~~-~i~~~ivrp~~v~g~~~~~~--------~~~~~~~~~~~~~~~~--~-------~--~~~~~  225 (307)
                      .+|..+|.+++.+++.. +++++++|++.+||+.....        ...+..++.++..+..  +       .  .+.+.
T Consensus       151 ~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  230 (338)
T PRK10675        151 KSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV  230 (338)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEE
Confidence            99999999999887654 89999999999999753211        1122334444444321  1       1  13467


Q ss_pred             cCcccHHHHHHHHHHhhcCC--CCC-ceEEec-CCcccHHHHHHHHHHhCCCCCCC
Q 021819          226 LGAVPVKDVAKAQVLLFESP--AAS-GRYLCT-NGIYQFGDFAERVSKLFPEFPVH  277 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~--~~~-g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  277 (307)
                      ++++|++|+|++++.++++.  ... +.||++ ++.+++.|+++.+.+.+ +.+.+
T Consensus       231 ~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~-g~~~~  285 (338)
T PRK10675        231 RDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKAC-GKPVN  285 (338)
T ss_pred             EeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHh-CCCCC
Confidence            89999999999999998752  222 468876 56799999999999999 44443

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=4e-32  Score=232.39  Aligned_cols=273  Identities=26%  Similarity=0.281  Sum_probs=201.4

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCC-CCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      ++.+++||||+||+|++|+++|++++ ..+|..++..+.......+........+.++.+|++|..++.+++.++ .|+|
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh   81 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVVH   81 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEEE
Confidence            36799999999999999999999998 238999988765333322221111227999999999999999999999 9999


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHH
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (307)
                      ||+.........+.+..+++|+.||.+++++|.+.+++++||+||...+.+....  .--+|+.+ .|   ....++|+.
T Consensus        82 ~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~--~n~~E~~p-~p---~~~~d~Y~~  155 (361)
T KOG1430|consen   82 CAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPI--INGDESLP-YP---LKHIDPYGE  155 (361)
T ss_pred             eccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeec--ccCCCCCC-Cc---cccccccch
Confidence            9887666555556789999999999999999999999999999998876654331  22344433 22   122368999


Q ss_pred             HHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCC---CCCcccCcccHHHHHHHHHHhhc
Q 021819          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT---QEYHWLGAVPVKDVAKAQVLLFE  243 (307)
Q Consensus       167 sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~dva~~~~~~~~  243 (307)
                      ||..+|.++++.+...++..+++||+.||||++...   .......+..+....   ..+...++++++.+|.+.+.+..
T Consensus       156 sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~---~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~  232 (361)
T KOG1430|consen  156 SKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRL---LPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAAR  232 (361)
T ss_pred             HHHHHHHHHHHhcCCCCeeEEEEccccccCCCCccc---cHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHH
Confidence            999999999988665679999999999999998765   334444444444432   23478899999999999876553


Q ss_pred             -----CCCCCce-E-EecCCcccHHHHHHHHHHhCCCCCCC--ccccCCchHHHHHH
Q 021819          244 -----SPAASGR-Y-LCTNGIYQFGDFAERVSKLFPEFPVH--RFVFQSPLRFILWL  291 (307)
Q Consensus       244 -----~~~~~g~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  291 (307)
                           .+...|+ | +..+.+....+++..+.+.+ +...+  ...|.++..++..+
T Consensus       233 aL~~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~l-g~~~~~~~~~p~~l~~~~~~l  288 (361)
T KOG1430|consen  233 ALLDKSPSVNGQFYFITDDTPVRFFDFLSPLVKAL-GYCLPSSIKLPLFLSYFLAYL  288 (361)
T ss_pred             HHHhcCCccCceEEEEeCCCcchhhHHHHHHHHhc-CCCCCceeecchHHHHHHHHH
Confidence                 3445564 4 55667777777777899888 66666  34444444444433

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.8e-32  Score=221.06  Aligned_cols=251  Identities=22%  Similarity=0.270  Sum_probs=202.0

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCC--CCeEEEEeC---CCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--C
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNN--YTSINATVF---PGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--G   80 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g--~~~V~~~~r---~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~   80 (307)
                      +.++++||||+||||++.+..+.++-  + ..+.++-   ... ...+++..  ..++.+++.+|+.+...+..++.  .
T Consensus         5 ~~~~vlItgg~gfi~Sn~~~~~~~~~p~~-~~v~idkL~~~s~-~~~l~~~~--n~p~ykfv~~di~~~~~~~~~~~~~~   80 (331)
T KOG0747|consen    5 KEKNVLITGGAGFIGSNFINYLVDKYPDY-KFVNLDKLDYCSN-LKNLEPVR--NSPNYKFVEGDIADADLVLYLFETEE   80 (331)
T ss_pred             ccceEEEecCcCcchhhhhhhcccCCCCC-cEEEEeecccccc-cchhhhhc--cCCCceEeeccccchHHHHhhhccCc
Confidence            34799999999999999999999883  4 4555443   112 33333322  12278999999999998888875  6


Q ss_pred             ccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhc-CCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcc
Q 021819           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKS  159 (307)
Q Consensus        81 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~  159 (307)
                      +|.|+|.|+......+..+..+....|+.++..|+++++.. ++++|||+|| -.+|+.... .....|...+.|.    
T Consensus        81 id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvST-deVYGds~~-~~~~~E~s~~nPt----  154 (331)
T KOG0747|consen   81 IDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVST-DEVYGDSDE-DAVVGEASLLNPT----  154 (331)
T ss_pred             hhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecc-cceecCccc-cccccccccCCCC----
Confidence            89999999999888888888999999999999999999998 5899999999 456776553 1223377777776    


Q ss_pred             cCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC---CCcccCcccHHHHHH
Q 021819          160 RKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAK  236 (307)
Q Consensus       160 ~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~dva~  236 (307)
                        ++|+.+|+++|.+++.+.++++++++++|-++||||++... ..++.|+.....+++..+   +.+.++|+|++|+++
T Consensus       155 --npyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~-klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~e  231 (331)
T KOG0747|consen  155 --NPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPE-KLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSE  231 (331)
T ss_pred             --CchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChH-HHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHH
Confidence              89999999999999999999999999999999999998765 567777776666776655   348999999999999


Q ss_pred             HHHHhhcCCCCCceEEec-CCcccHHHHHHHHHHhC
Q 021819          237 AQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLF  271 (307)
Q Consensus       237 ~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~  271 (307)
                      ++..+++..+.+.+||++ +.+.+..|+++.+.+.+
T Consensus       232 a~~~v~~Kg~~geIYNIgtd~e~~~~~l~k~i~eli  267 (331)
T KOG0747|consen  232 AFKAVLEKGELGEIYNIGTDDEMRVIDLAKDICELF  267 (331)
T ss_pred             HHHHHHhcCCccceeeccCcchhhHHHHHHHHHHHH
Confidence            999999986666688765 57788888887777666

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=100.00  E-value=2.3e-31  Score=228.87  Aligned_cols=225  Identities=21%  Similarity=0.225  Sum_probs=179.8

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCc--cEEEEec
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC--KGVFHVA   88 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~--d~vi~~a   88 (307)
                      +|+|||||||||++|+++|+++|+ +|++++|+                     .+|+.|.+++.++++++  |+|||+|
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~-~v~~~~r~---------------------~~d~~~~~~~~~~~~~~~~d~vi~~a   58 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGR-VVVALTSS---------------------QLDLTDPEALERLLRAIRPDAVVNTA   58 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCC-EEEEeCCc---------------------ccCCCCHHHHHHHHHhCCCCEEEECC
Confidence            589999999999999999999999 99988774                     27899999999999865  9999999


Q ss_pred             cCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHH
Q 021819           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (307)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (307)
                      +..............+++|+.++.+++++|++.+. +||++||.. +|+...  ..+++|+++..+.      +.|+.+|
T Consensus        59 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~-vy~~~~--~~~~~E~~~~~~~------~~Y~~~K  128 (287)
T TIGR01214        59 AYTDVDGAESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDY-VFDGEG--KRPYREDDATNPL------NVYGQSK  128 (287)
T ss_pred             ccccccccccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeee-eecCCC--CCCCCCCCCCCCc------chhhHHH
Confidence            97654333334567889999999999999998885 899999955 454332  3578888766553      6899999


Q ss_pred             HHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCC-CCCcccCcccHHHHHHHHHHhhcCC-C
Q 021819          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEYHWLGAVPVKDVAKAQVLLFESP-A  246 (307)
Q Consensus       169 ~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~dva~~~~~~~~~~-~  246 (307)
                      ..+|.+++.    .+++++++||+.|||+....  .....++.....+.+.. .+++.+++++++|+|+++..+++.+ .
T Consensus       129 ~~~E~~~~~----~~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~  202 (287)
T TIGR01214       129 LAGEQAIRA----AGPNALIVRTSWLYGGGGGR--NFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQRLAR  202 (287)
T ss_pred             HHHHHHHHH----hCCCeEEEEeeecccCCCCC--CHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhhccC
Confidence            999999874    37899999999999998432  33445555555555443 3556789999999999999999876 3


Q ss_pred             CCceEEec-CCcccHHHHHHHHHHhCCC
Q 021819          247 ASGRYLCT-NGIYQFGDFAERVSKLFPE  273 (307)
Q Consensus       247 ~~g~~~~~-~~~~~~~~~~~~~~~~~~~  273 (307)
                      ..+.|+++ ++.+++.|+++.+.+.++.
T Consensus       203 ~~~~~ni~~~~~~s~~e~~~~i~~~~~~  230 (287)
T TIGR01214       203 ARGVYHLANSGQCSWYEFAQAIFEEAGA  230 (287)
T ss_pred             CCCeEEEECCCCcCHHHHHHHHHHHhCc
Confidence            56788765 5679999999999999943

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=100.00  E-value=1.2e-31  Score=232.70  Aligned_cols=233  Identities=19%  Similarity=0.214  Sum_probs=176.9

Q ss_pred             EEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEEEEeccC
Q 021819           13 CVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFHVASP   90 (307)
Q Consensus        13 lItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~vi~~a~~   90 (307)
                      ||||||||||++|++.|++.|+ +|+++.+.                    ..+|++|.+++.++++  ++|+|||||+.
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~-~v~~~~~~--------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~   59 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGF-TNLVLRTH--------------------KELDLTRQADVEAFFAKEKPTYVILAAAK   59 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCC-cEEEeecc--------------------ccCCCCCHHHHHHHHhccCCCEEEEeeee
Confidence            6999999999999999999998 66554321                    1379999999999887  57999999997


Q ss_pred             CCC-CCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccC-ccHHHHH
Q 021819           91 CTL-EDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK-KWYPVSK  168 (307)
Q Consensus        91 ~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~-~~y~~sK  168 (307)
                      ... ..........++.|+.++.+++++|++.+++++||+||.. +|+...  ..+++|+++....  ..+. .+|+.+|
T Consensus        60 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~-vyg~~~--~~~~~E~~~~~~~--~~p~~~~Y~~sK  134 (306)
T PLN02725         60 VGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSC-IYPKFA--PQPIPETALLTGP--PEPTNEWYAIAK  134 (306)
T ss_pred             ecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCcee-ecCCCC--CCCCCHHHhccCC--CCCCcchHHHHH
Confidence            543 1122345678899999999999999999999999999965 565432  3578887643211  1111 3599999


Q ss_pred             HHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC---CcchHHHHHH----HHcCCCCCC----CCcccCcccHHHHHHH
Q 021819          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQ----LLQGSKDTQ----EYHWLGAVPVKDVAKA  237 (307)
Q Consensus       169 ~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~---~~~~~~~~~~----~~~~~~~~~----~~~~~~~i~~~dva~~  237 (307)
                      .++|.+++.+.+..+++++++||+.|||+.....   ...+..++..    ...+.+...    +.+.++++|++|++++
T Consensus       135 ~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~  214 (306)
T PLN02725        135 IAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADA  214 (306)
T ss_pred             HHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHH
Confidence            9999999988888899999999999999975421   1223333332    234444332    3467899999999999


Q ss_pred             HHHhhcCCCCCceEEec-CCcccHHHHHHHHHHhC
Q 021819          238 QVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLF  271 (307)
Q Consensus       238 ~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~  271 (307)
                      ++.+++.....+.||++ +..+++.|+++.+.+.+
T Consensus       215 ~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~  249 (306)
T PLN02725        215 VVFLMRRYSGAEHVNVGSGDEVTIKELAELVKEVV  249 (306)
T ss_pred             HHHHHhccccCcceEeCCCCcccHHHHHHHHHHHh
Confidence            99999876555677765 56799999999999998

>CHL00194 ycf39 Ycf39; Provisional

Probab=100.00  E-value=1.5e-31  Score=232.96  Aligned_cols=239  Identities=16%  Similarity=0.135  Sum_probs=178.1

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEecc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a~   89 (307)
                      |+|+|||||||||++|+++|+++|+ +|++++|+.+....+...      +++++.+|++|++++.++++++|+|||+++
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~------~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~   73 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEW------GAELVYGDLSLPETLPPSFKGVTAIIDAST   73 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhc------CCEEEECCCCCHHHHHHHHCCCCEEEECCC
Confidence            3899999999999999999999999 999999976443322211      688999999999999999999999999976


Q ss_pred             CCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHH
Q 021819           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (307)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (307)
                      ...     ......+++|+.++.+++++|++.|+++||++||.++. ....                     .+|..+|.
T Consensus        74 ~~~-----~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~-~~~~---------------------~~~~~~K~  126 (317)
T CHL00194         74 SRP-----SDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAE-QYPY---------------------IPLMKLKS  126 (317)
T ss_pred             CCC-----CCccchhhhhHHHHHHHHHHHHHcCCCEEEEecccccc-ccCC---------------------ChHHHHHH
Confidence            432     22345778899999999999999999999999985421 1111                     35889999


Q ss_pred             HHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC--CCcccCcccHHHHHHHHHHhhcCCCC
Q 021819          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ--EYHWLGAVPVKDVAKAQVLLFESPAA  247 (307)
Q Consensus       170 ~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~dva~~~~~~~~~~~~  247 (307)
                      .+|++++    .++++++++||+.+|+....       .+......+.+...  +++.++++|++|+|++++.+++++..
T Consensus       127 ~~e~~l~----~~~l~~tilRp~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~  195 (317)
T CHL00194        127 DIEQKLK----KSGIPYTIFRLAGFFQGLIS-------QYAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPET  195 (317)
T ss_pred             HHHHHHH----HcCCCeEEEeecHHhhhhhh-------hhhhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCccc
Confidence            9998875    57999999999988764211       11111222333222  34678999999999999999987654


Q ss_pred             C-ceEEecC-CcccHHHHHHHHHHhCCCCCCCc-cccCCchHHHHHHHhh
Q 021819          248 S-GRYLCTN-GIYQFGDFAERVSKLFPEFPVHR-FVFQSPLRFILWLAII  294 (307)
Q Consensus       248 ~-g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  294 (307)
                      . +.|++++ +.+|+.|+++.+.+.+ +.+... ..|.+..++..++..+
T Consensus       196 ~~~~~ni~g~~~~s~~el~~~~~~~~-g~~~~~~~vp~~~~~~~~~~~~~  244 (317)
T CHL00194        196 KNKTFPLVGPKSWNSSEIISLCEQLS-GQKAKISRVPLFLLKLLRQITGF  244 (317)
T ss_pred             cCcEEEecCCCccCHHHHHHHHHHHh-CCCCeEEeCCHHHHHHHHHHHhh
Confidence            4 4688764 6799999999999999 554333 3444455554444443

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=1.4e-31  Score=215.93  Aligned_cols=251  Identities=24%  Similarity=0.312  Sum_probs=200.4

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC-CcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      ..++|+||||.||||+|||+.|..+|+ +|++++.-... ...+....  ...+++.+.-|+..+     ++..+|-|+|
T Consensus        26 ~~lrI~itGgaGFIgSHLvdkLm~egh-~VIa~Dn~ftg~k~n~~~~~--~~~~fel~~hdv~~p-----l~~evD~Iyh   97 (350)
T KOG1429|consen   26 QNLRILITGGAGFIGSHLVDKLMTEGH-EVIALDNYFTGRKENLEHWI--GHPNFELIRHDVVEP-----LLKEVDQIYH   97 (350)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHhcCC-eEEEEecccccchhhcchhc--cCcceeEEEeechhH-----HHHHhhhhhh
Confidence            357999999999999999999999998 99999873222 22222211  112677787787554     7889999999


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHH
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (307)
                      +|+..+.......+.+.+..|+.++.+.+..|++.+ +||++.|| +.+|+.+..  .|..|+.|-.-. +..+.+.|..
T Consensus        98 LAapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aST-seVYgdp~~--hpq~e~ywg~vn-pigpr~cyde  172 (350)
T KOG1429|consen   98 LAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLAST-SEVYGDPLV--HPQVETYWGNVN-PIGPRSCYDE  172 (350)
T ss_pred             hccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeec-ccccCCccc--CCCccccccccC-cCCchhhhhH
Confidence            999988766666778999999999999999999998 78999998 668887664  455555543221 2333467999


Q ss_pred             HHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC-CcchHHHHHHHHcCCCCCC---CCcccCcccHHHHHHHHHHhh
Q 021819          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY-LNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQVLLF  242 (307)
Q Consensus       167 sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~dva~~~~~~~  242 (307)
                      .|..+|.++..+.+..|+.+.|.|+.++|||...-. .....-++.+.+++.++.+   +.+.++|.+++|++++++.++
T Consensus       173 gKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm  252 (350)
T KOG1429|consen  173 GKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLM  252 (350)
T ss_pred             HHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHh
Confidence            999999999999999999999999999999988655 3455566677788888765   448999999999999999999


Q ss_pred             cCCCCCceEEecCCcccHHHHHHHHHHhC
Q 021819          243 ESPAASGRYLCTNGIYQFGDFAERVSKLF  271 (307)
Q Consensus       243 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  271 (307)
                      +++.....++..++.+|+.|+++++.+..
T Consensus       253 ~s~~~~pvNiGnp~e~Tm~elAemv~~~~  281 (350)
T KOG1429|consen  253 ESDYRGPVNIGNPGEFTMLELAEMVKELI  281 (350)
T ss_pred             cCCCcCCcccCCccceeHHHHHHHHHHHc
Confidence            99887665556667899999999999988

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=7.1e-31  Score=217.30  Aligned_cols=221  Identities=22%  Similarity=0.227  Sum_probs=192.1

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEEEEec
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFHVA   88 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~vi~~a   88 (307)
                      +|||||++|++|++|++.|. .++ +|++++|..                     .|++|++.+.+++.  ++|+|||+|
T Consensus         2 ~iLi~G~~GqLG~~L~~~l~-~~~-~v~a~~~~~---------------------~Ditd~~~v~~~i~~~~PDvVIn~A   58 (281)
T COG1091           2 KILITGANGQLGTELRRALP-GEF-EVIATDRAE---------------------LDITDPDAVLEVIRETRPDVVINAA   58 (281)
T ss_pred             cEEEEcCCChHHHHHHHHhC-CCc-eEEeccCcc---------------------ccccChHHHHHHHHhhCCCEEEECc
Confidence            49999999999999999998 667 898887642                     79999999999997  579999999


Q ss_pred             cCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHH
Q 021819           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (307)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (307)
                      +...++..+.+.+..+.+|..|+.+++++|++.|. ++||+||-..+.+..+   .+..|++++.|.      +.||.||
T Consensus        59 Ayt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~---~~Y~E~D~~~P~------nvYG~sK  128 (281)
T COG1091          59 AYTAVDKAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKG---GPYKETDTPNPL------NVYGRSK  128 (281)
T ss_pred             cccccccccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCC---CCCCCCCCCCCh------hhhhHHH
Confidence            99999888888999999999999999999999995 6999999666555443   689999998886      7999999


Q ss_pred             HHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC-CCcccCcccHHHHHHHHHHhhcCCCC
Q 021819          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ-EYHWLGAVPVKDVAKAQVLLFESPAA  247 (307)
Q Consensus       169 ~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~dva~~~~~~~~~~~~  247 (307)
                      +++|..++    ..+-+..|+|.+.+||....   ++...+++....+.++.. .++..+++++.|+|+++..++.....
T Consensus       129 l~GE~~v~----~~~~~~~I~Rtswv~g~~g~---nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~~  201 (281)
T COG1091         129 LAGEEAVR----AAGPRHLILRTSWVYGEYGN---NFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEKE  201 (281)
T ss_pred             HHHHHHHH----HhCCCEEEEEeeeeecCCCC---CHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhcccc
Confidence            99999987    45689999999999998763   456677777777776654 67889999999999999999998888


Q ss_pred             CceEEecCCc-ccHHHHHHHHHHhC
Q 021819          248 SGRYLCTNGI-YQFGDFAERVSKLF  271 (307)
Q Consensus       248 ~g~~~~~~~~-~~~~~~~~~~~~~~  271 (307)
                      .|.||+++.+ .||.|+++.+.+.+
T Consensus       202 ~~~yH~~~~g~~Swydfa~~I~~~~  226 (281)
T COG1091         202 GGVYHLVNSGECSWYEFAKAIFEEA  226 (281)
T ss_pred             CcEEEEeCCCcccHHHHHHHHHHHh
Confidence            8899988765 69999999999988

>PLN02996 fatty acyl-CoA reductase

Probab=100.00  E-value=5.4e-31  Score=240.33  Aligned_cols=261  Identities=17%  Similarity=0.211  Sum_probs=184.4

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCC--CCeEEEEeCCCCCCcccccC-----------------CCC----CCCceEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGSDSSHLFAL-----------------PGA----GDANLRV   63 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g--~~~V~~~~r~~~~~~~~~~~-----------------~~~----~~~~~~~   63 (307)
                      .++|+|+|||||||||++|++.|+..+  ..+|+++.|..........+                 ...    ...++++
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            467899999999999999999999764  35799999965433211110                 000    0127899


Q ss_pred             EEcccC-------ChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhc-CCcEEEEecCccee
Q 021819           64 FEADVL-------DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAI  135 (307)
Q Consensus        64 i~~D~~-------d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~iSS~~~~  135 (307)
                      +.+|++       |.+.++++++++|+|||+|+....   .......+++|+.|+.+++++|++. ++++|||+||..+ 
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~v-  164 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNF---DERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYV-  164 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHhCCCEEEECccccCC---cCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEE-
Confidence            999998       445577788899999999998654   2356788999999999999999986 6889999999654 


Q ss_pred             ccCCCCCCcccccCCCC----------------------------------------------chhhhcccCccHHHHHH
Q 021819          136 VPNPGWKGKVFDETSWT----------------------------------------------DLEYCKSRKKWYPVSKT  169 (307)
Q Consensus       136 ~~~~~~~~~~~~E~~~~----------------------------------------------~~~~~~~~~~~y~~sK~  169 (307)
                      |+...   ..+.|...+                                              .+.....+.+.|+.||.
T Consensus       165 yG~~~---~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~  241 (491)
T PLN02996        165 CGEKS---GLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKA  241 (491)
T ss_pred             ecCCC---ceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHH
Confidence            44322   111121111                                              00011123467999999


Q ss_pred             HHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCc------chHHHHHHHHcCCCCC---CCCcccCcccHHHHHHHHHH
Q 021819          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLN------ASCAVLQQLLQGSKDT---QEYHWLGAVPVKDVAKAQVL  240 (307)
Q Consensus       170 ~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~i~~~dva~~~~~  240 (307)
                      ++|.++..++  .+++++++||++|+|+...+...      ....++.....|....   .+++.+|++|++|++++++.
T Consensus       242 ~aE~lv~~~~--~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~  319 (491)
T PLN02996        242 MGEMLLGNFK--ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIV  319 (491)
T ss_pred             HHHHHHHHhc--CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHH
Confidence            9999998763  48999999999999988655321      1233344444554432   24579999999999999999


Q ss_pred             hhcCC--C--CCceEEec-C--CcccHHHHHHHHHHhCCCCCC
Q 021819          241 LFESP--A--ASGRYLCT-N--GIYQFGDFAERVSKLFPEFPV  276 (307)
Q Consensus       241 ~~~~~--~--~~g~~~~~-~--~~~~~~~~~~~~~~~~~~~~~  276 (307)
                      ++...  .  ....||++ +  .++++.++++.+.+.+...|+
T Consensus       320 a~~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p~  362 (491)
T PLN02996        320 AMAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNPW  362 (491)
T ss_pred             HHHHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCCC
Confidence            88753  1  22368876 4  579999999999987744443

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=100.00  E-value=5.4e-31  Score=232.50  Aligned_cols=239  Identities=23%  Similarity=0.175  Sum_probs=206.7

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccC-CC-CCCCceEEEEcccCChhHHHHHhcC--c
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-PG-AGDANLRVFEADVLDSGAVSRAVEG--C   81 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-~~-~~~~~~~~i~~D~~d~~~~~~~~~~--~   81 (307)
                      ..++|+|+||||+|.||+.||+++++.+..+++.++|++.+....... .. ....++.++.+|+.|.+.+..++.+  +
T Consensus       247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kv  326 (588)
T COG1086         247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKV  326 (588)
T ss_pred             HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCC
Confidence            357899999999999999999999999988999999976554322211 11 0112788999999999999999997  9


Q ss_pred             cEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccC
Q 021819           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK  161 (307)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  161 (307)
                      |+|||+|+....+..+..+.+.+++|+.||.|++++|.++|+++||.+||-.++++.                       
T Consensus       327 d~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~Pt-----------------------  383 (588)
T COG1086         327 DIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVNPT-----------------------  383 (588)
T ss_pred             ceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccCCc-----------------------
Confidence            999999999999888889999999999999999999999999999999997776542                       


Q ss_pred             ccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC--CCcccCcccHHHHHH
Q 021819          162 KWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ--EYHWLGAVPVKDVAK  236 (307)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~dva~  236 (307)
                      +.||.||.++|.++..++++.   +-+++++|+|+|.|..    .+.++-|.+++.+|+|+.+  ++-++-|+++.|.++
T Consensus       384 NvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSr----GSViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~  459 (588)
T COG1086         384 NVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSR----GSVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQ  459 (588)
T ss_pred             hHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCC----CCCHHHHHHHHHcCCCccccCCCceeEEEEHHHHHH
Confidence            689999999999999887643   3899999999999987    4577888899999999887  557888999999999


Q ss_pred             HHHHhhcCCCCCceEEec-CCcccHHHHHHHHHHhC
Q 021819          237 AQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLF  271 (307)
Q Consensus       237 ~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~  271 (307)
                      .++.+....+.+..|++. |+++++.|+++.|.+.+
T Consensus       460 LVlqA~a~~~gGeifvldMGepvkI~dLAk~mi~l~  495 (588)
T COG1086         460 LVLQAGAIAKGGEIFVLDMGEPVKIIDLAKAMIELA  495 (588)
T ss_pred             HHHHHHhhcCCCcEEEEcCCCCeEHHHHHHHHHHHh
Confidence            999999987777789887 68999999999999998

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.98  E-value=3e-31  Score=218.98  Aligned_cols=258  Identities=22%  Similarity=0.251  Sum_probs=203.0

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeC-CCCCCccccc---CCCCCCCceEEEEcccCChhHHHHHhc--Ccc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDSSHLFA---LPGAGDANLRVFEADVLDSGAVSRAVE--GCK   82 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r-~~~~~~~~~~---~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d   82 (307)
                      .++||||||+||||+|.+-+|+++|+ .|++++. +..-...+++   +..+.. ++.++++|++|.++++++++  .+|
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy-~v~~vDNl~n~~~~sl~r~~~l~~~~~-~v~f~~~Dl~D~~~L~kvF~~~~fd   79 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGY-GVVIVDNLNNSYLESLKRVRQLLGEGK-SVFFVEGDLNDAEALEKLFSEVKFD   79 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCC-cEEEEecccccchhHHHHHHHhcCCCC-ceEEEEeccCCHHHHHHHHhhcCCc
Confidence            46899999999999999999999999 8888877 2222333322   222222 89999999999999999997  679


Q ss_pred             EEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCc-hhhhcccC
Q 021819           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD-LEYCKSRK  161 (307)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~-~~~~~~~~  161 (307)
                      .|+|+|+......+...+..++..|+.|+.++++.|++++++.+|+.|| +.+|+.+..  .|++|+.+.. |.      
T Consensus        80 ~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sss-atvYG~p~~--ip~te~~~t~~p~------  150 (343)
T KOG1371|consen   80 AVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSS-ATVYGLPTK--VPITEEDPTDQPT------  150 (343)
T ss_pred             eEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecc-eeeecCcce--eeccCcCCCCCCC------
Confidence            9999999988877777789999999999999999999999999999888 557887764  8999999887 43      


Q ss_pred             ccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeC--CCCCCC------CcchHHHHHHHHcCCCC---------C--CC
Q 021819          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLG--PLMQPY------LNASCAVLQQLLQGSKD---------T--QE  222 (307)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g--~~~~~~------~~~~~~~~~~~~~~~~~---------~--~~  222 (307)
                      ++|+.+|.+.|++...+.+.+++.++.+|..+++|  |.....      .+.+.....+..-+...         .  .+
T Consensus       151 ~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dg  230 (343)
T KOG1371|consen  151 NPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDG  230 (343)
T ss_pred             CcchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCC
Confidence            78999999999999999998899999999999998  322111      11222122222222211         1  13


Q ss_pred             CcccCcccHHHHHHHHHHhhcCCCCC---ceEEec-CCcccHHHHHHHHHHhCCCCCCCc
Q 021819          223 YHWLGAVPVKDVAKAQVLLFESPAAS---GRYLCT-NGIYQFGDFAERVSKLFPEFPVHR  278 (307)
Q Consensus       223 ~~~~~~i~~~dva~~~~~~~~~~~~~---g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  278 (307)
                      +..++++|+-|.|+..+.++......   +.||++ +.+.++.++...+.++. +.+++.
T Consensus       231 t~vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~-g~~~k~  289 (343)
T KOG1371|consen  231 TIVRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKAL-GVKIKK  289 (343)
T ss_pred             CeeecceeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHh-cCCCCc
Confidence            57899999999999999999887653   468765 67899999999999999 666555

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.98  E-value=1.8e-30  Score=226.14  Aligned_cols=241  Identities=20%  Similarity=0.197  Sum_probs=180.1

Q ss_pred             EEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc----CccEEEEe
Q 021819           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----GCKGVFHV   87 (307)
Q Consensus        12 ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----~~d~vi~~   87 (307)
                      |+|||||||||++|++.|+++|+.+|++++|..... .+..+      ....+..|+.+.+.++.+.+    ++|+|||+
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~~~------~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~   73 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFLNL------ADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQ   73 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhhhh------hheeeeccCcchhHHHHHHhhccCCCCEEEEC
Confidence            689999999999999999999974688877654322 11111      12356678888877776654    79999999


Q ss_pred             ccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHH
Q 021819           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (307)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (307)
                      |+....  ...+....+++|+.++.+++++|++.++ +|||+||.. +|+...   .+++|+++..     .+.+.|+.+
T Consensus        74 A~~~~~--~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~-vy~~~~---~~~~e~~~~~-----~p~~~Y~~s  141 (314)
T TIGR02197        74 GACSDT--TETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAA-TYGDGE---AGFREGRELE-----RPLNVYGYS  141 (314)
T ss_pred             ccccCc--cccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHH-hcCCCC---CCcccccCcC-----CCCCHHHHH
Confidence            997543  2345577889999999999999999886 799999955 565433   3456665432     122679999


Q ss_pred             HHHHHHHHHHHHH--hcCCcEEEEecCceeCCCCCCC---CcchHHHHHHHHcCCCCCC---------CCcccCcccHHH
Q 021819          168 KTLAEKAAWEFAE--KHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDTQ---------EYHWLGAVPVKD  233 (307)
Q Consensus       168 K~~~e~~~~~~~~--~~~i~~~ivrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~---------~~~~~~~i~~~d  233 (307)
                      |..+|.+++.+..  ..+++++++||++|||+.....   ...+..++.....+.++.+         +.+.++++|++|
T Consensus       142 K~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  221 (314)
T TIGR02197       142 KFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKD  221 (314)
T ss_pred             HHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHH
Confidence            9999999987542  2368999999999999986432   2345556666666654422         336689999999


Q ss_pred             HHHHHHHhhcCCCCCceEEecC-CcccHHHHHHHHHHhCC
Q 021819          234 VAKAQVLLFESPAASGRYLCTN-GIYQFGDFAERVSKLFP  272 (307)
Q Consensus       234 va~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~  272 (307)
                      +++++..++.. ...+.||+++ +++++.|+++.+.+.++
T Consensus       222 ~a~~i~~~~~~-~~~~~yni~~~~~~s~~e~~~~i~~~~g  260 (314)
T TIGR02197       222 VVDVNLWLLEN-GVSGIFNLGTGRARSFNDLADAVFKALG  260 (314)
T ss_pred             HHHHHHHHHhc-ccCceEEcCCCCCccHHHHHHHHHHHhC
Confidence            99999999987 4557898765 67999999999999983

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.98  E-value=2.9e-32  Score=226.85  Aligned_cols=234  Identities=23%  Similarity=0.149  Sum_probs=179.7

Q ss_pred             EEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCC--CCCCce----EEEEcccCChhHHHHHhc--CccE
Q 021819           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG--AGDANL----RVFEADVLDSGAVSRAVE--GCKG   83 (307)
Q Consensus        12 ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~----~~i~~D~~d~~~~~~~~~--~~d~   83 (307)
                      ||||||+|.||+.||++|++.+..++++++|++...-.+.....  ....++    ..+.+|+.|.+.+..+++  ++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            79999999999999999999987789999997665543332210  000133    345799999999999999  8999


Q ss_pred             EEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCcc
Q 021819           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (307)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (307)
                      |||+|+.......+..+.+.+++|+.||.|++++|.++++++||++||-.++.+                 .      +.
T Consensus        81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~P-----------------t------nv  137 (293)
T PF02719_consen   81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVNP-----------------T------NV  137 (293)
T ss_dssp             EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS-------------------------SH
T ss_pred             EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCCC-----------------C------cH
Confidence            999999988877778889999999999999999999999999999999766432                 1      68


Q ss_pred             HHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC--CCcccCcccHHHHHHHH
Q 021819          164 YPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ--EYHWLGAVPVKDVAKAQ  238 (307)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~dva~~~  238 (307)
                      ||.||.++|.++..++...   +.+++++|+|+|.|..    .+.++.|.+++..|.|+.+  ++.++-|++++|.++.+
T Consensus       138 mGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~----GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lv  213 (293)
T PF02719_consen  138 MGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSR----GSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLV  213 (293)
T ss_dssp             HHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGT----TSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCC----CcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHH
Confidence            9999999999998876654   6799999999999976    4678899999999999876  55788899999999999


Q ss_pred             HHhhcCCCCCceEEec-CCcccHHHHHHHHHHhCC
Q 021819          239 VLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFP  272 (307)
Q Consensus       239 ~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~  272 (307)
                      +.+......+..|+.. ++++++.|+++.+.+.++
T Consensus       214 l~a~~~~~~geifvl~mg~~v~I~dlA~~~i~~~g  248 (293)
T PF02719_consen  214 LQAAALAKGGEIFVLDMGEPVKILDLAEAMIELSG  248 (293)
T ss_dssp             HHHHHH--TTEEEEE---TCEECCCHHHHHHHHTT
T ss_pred             HHHHhhCCCCcEEEecCCCCcCHHHHHHHHHhhcc
Confidence            9999877666678876 688999999999999993

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.98  E-value=5.6e-30  Score=224.18  Aligned_cols=254  Identities=20%  Similarity=0.194  Sum_probs=187.3

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC-cccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEEEEe
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFHV   87 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~vi~~   87 (307)
                      +|+||||||+||++|++.|+++|+ +|++++|..... ..+..... .. +++++.+|+++++++.++++  ++|+|||+
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~-~V~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~   77 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGH-EVVVLDNLSNGSPEALKRGER-IT-RVTFVEGDLRDRELLDRLFEEHKIDAVIHF   77 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCC-eEEEEeCCCccchhhhhhhcc-cc-ceEEEECCCCCHHHHHHHHHhCCCcEEEEC
Confidence            589999999999999999999999 888876633221 11111110 11 47788999999999999886  68999999


Q ss_pred             ccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHH
Q 021819           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (307)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (307)
                      ||............+.++.|+.++.+++++|.+.+++++|++||.. +|+...  ..+++|+++..+.      +.|+.+
T Consensus        78 ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~-~~g~~~--~~~~~e~~~~~~~------~~y~~s  148 (328)
T TIGR01179        78 AGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAA-VYGEPS--SIPISEDSPLGPI------NPYGRS  148 (328)
T ss_pred             ccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchh-hcCCCC--CCCccccCCCCCC------CchHHH
Confidence            9976443333445678899999999999999999888999999855 454333  2467888766543      689999


Q ss_pred             HHHHHHHHHHHHHh-cCCcEEEEecCceeCCCCCCC--------CcchHHHHHHHH-cCCCC---------CCCCcccCc
Q 021819          168 KTLAEKAAWEFAEK-HGVDVVAIHPATCLGPLMQPY--------LNASCAVLQQLL-QGSKD---------TQEYHWLGA  228 (307)
Q Consensus       168 K~~~e~~~~~~~~~-~~i~~~ivrp~~v~g~~~~~~--------~~~~~~~~~~~~-~~~~~---------~~~~~~~~~  228 (307)
                      |..+|.+++.++++ .+++++++||+.+||+...+.        ...+..+..... .....         ..+++.++|
T Consensus       149 K~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  228 (328)
T TIGR01179       149 KLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDY  228 (328)
T ss_pred             HHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEee
Confidence            99999999988877 799999999999999864321        112222222222 11111         123366899


Q ss_pred             ccHHHHHHHHHHhhcCC---CCCceEEec-CCcccHHHHHHHHHHhCCCCCCC
Q 021819          229 VPVKDVAKAQVLLFESP---AASGRYLCT-NGIYQFGDFAERVSKLFPEFPVH  277 (307)
Q Consensus       229 i~~~dva~~~~~~~~~~---~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  277 (307)
                      +|++|+++++..+++..   ...+.|+++ ++.+++.|+++.+.+.+ +.+.+
T Consensus       229 v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~-g~~~~  280 (328)
T TIGR01179       229 IHVMDLADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVS-GVDFP  280 (328)
T ss_pred             eeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHh-CCCcc
Confidence            99999999999998752   233579875 56799999999999999 55544

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.97  E-value=1.6e-31  Score=228.56  Aligned_cols=227  Identities=23%  Similarity=0.262  Sum_probs=169.5

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEEEEe
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFHV   87 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~vi~~   87 (307)
                      ||||||||+|+||++|++.|.++|+ +|+++.|.                     ..|++|.+++.+.++  ++|+||||
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~-~v~~~~r~---------------------~~dl~d~~~~~~~~~~~~pd~Vin~   58 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGY-EVIATSRS---------------------DLDLTDPEAVAKLLEAFKPDVVINC   58 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSE-EEEEESTT---------------------CS-TTSHHHHHHHHHHH--SEEEE-
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCC-EEEEeCch---------------------hcCCCCHHHHHHHHHHhCCCeEecc
Confidence            5999999999999999999999998 89888664                     379999999999987  58999999


Q ss_pred             ccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHH
Q 021819           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (307)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (307)
                      ||.......+..+...+.+|+.++.+|+++|.+.+. ++||+||...+.+..   +.+.+|++++.|.      +.||.+
T Consensus        59 aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~---~~~y~E~d~~~P~------~~YG~~  128 (286)
T PF04321_consen   59 AAYTNVDACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDK---GGPYTEDDPPNPL------NVYGRS  128 (286)
T ss_dssp             -----HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SST---SSSB-TTS----S------SHHHHH
T ss_pred             ceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCc---ccccccCCCCCCC------CHHHHH
Confidence            998766555556789999999999999999999985 799999976554442   3679999988876      789999


Q ss_pred             HHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC-CCcccCcccHHHHHHHHHHhhcCCC
Q 021819          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ-EYHWLGAVPVKDVAKAQVLLFESPA  246 (307)
Q Consensus       168 K~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~dva~~~~~~~~~~~  246 (307)
                      |.++|+.+++    ..-+..|+|++.+||+..   .+++..++.....++.+.. .+..+++++++|+|+++..++++..
T Consensus       129 K~~~E~~v~~----~~~~~~IlR~~~~~g~~~---~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~  201 (286)
T PF04321_consen  129 KLEGEQAVRA----ACPNALILRTSWVYGPSG---RNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNL  201 (286)
T ss_dssp             HHHHHHHHHH----H-SSEEEEEE-SEESSSS---SSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH----hcCCEEEEecceecccCC---CchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhcc
Confidence            9999999974    234999999999999932   3456677777777777665 5578899999999999999998765


Q ss_pred             C----CceEEecC-CcccHHHHHHHHHHhCCCCCC
Q 021819          247 A----SGRYLCTN-GIYQFGDFAERVSKLFPEFPV  276 (307)
Q Consensus       247 ~----~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~  276 (307)
                      .    .|+||+++ +.+++.|+++.+.+.+ +.+.
T Consensus       202 ~~~~~~Giyh~~~~~~~S~~e~~~~i~~~~-~~~~  235 (286)
T PF04321_consen  202 SGASPWGIYHLSGPERVSRYEFAEAIAKIL-GLDP  235 (286)
T ss_dssp             H-GGG-EEEE---BS-EEHHHHHHHHHHHH-THCT
T ss_pred             cccccceeEEEecCcccCHHHHHHHHHHHh-CCCC
Confidence            4    58998765 6699999999999998 4433

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.97  E-value=1.9e-28  Score=217.72  Aligned_cols=257  Identities=23%  Similarity=0.242  Sum_probs=181.4

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCccccc---------CCC-C-CCCceEEEEcccCCh------h
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFA---------LPG-A-GDANLRVFEADVLDS------G   72 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~---------~~~-~-~~~~~~~i~~D~~d~------~   72 (307)
                      +|+|||||||||++|++.|+++|+ .+|++++|+.+.......         +.. . ...++.++.+|++++      +
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            589999999999999999999983 279999997653211100         000 0 002789999999754      4


Q ss_pred             HHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           73 AVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        73 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      .+..+.+++|+|||+|+....   ..+.....+.|+.++.+++++|.+.+.++|+|+||.+.+.....   .+..|+++.
T Consensus        81 ~~~~~~~~~d~vih~a~~~~~---~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~---~~~~~~~~~  154 (367)
T TIGR01746        81 EWERLAENVDTIVHNGALVNW---VYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDL---STVTEDDAI  154 (367)
T ss_pred             HHHHHHhhCCEEEeCCcEecc---CCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCC---CCccccccc
Confidence            567777899999999997653   23456778899999999999999998888999999765433222   223444432


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCC---cchHHHHHHHHcCCCCCCCC-cccCc
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL---NASCAVLQQLLQGSKDTQEY-HWLGA  228 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~  228 (307)
                      .+.. ....+.|+.+|..+|.+++.+.+. |++++++||+.++|+...+..   ..+..++............. ...++
T Consensus       155 ~~~~-~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  232 (367)
T TIGR01746       155 VTPP-PGLAGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTEDL  232 (367)
T ss_pred             cccc-cccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccCc
Confidence            2211 112357999999999999877654 999999999999998544321   22333333333322222222 36789


Q ss_pred             ccHHHHHHHHHHhhcCCCC---CceEEecC-CcccHHHHHHHHHHhCCCCCCC
Q 021819          229 VPVKDVAKAQVLLFESPAA---SGRYLCTN-GIYQFGDFAERVSKLFPEFPVH  277 (307)
Q Consensus       229 i~~~dva~~~~~~~~~~~~---~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  277 (307)
                      ++++|++++++.++..+..   .+.|++++ +++++.|+++.+.+ . +.+++
T Consensus       233 ~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~-g~~~~  283 (367)
T TIGR01746       233 TPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-A-GYNLK  283 (367)
T ss_pred             ccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-c-CCCCC
Confidence            9999999999999887654   45788765 78999999999998 6 55544

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.97  E-value=9.6e-29  Score=213.03  Aligned_cols=246  Identities=18%  Similarity=0.194  Sum_probs=170.6

Q ss_pred             EEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEeccCC
Q 021819           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPC   91 (307)
Q Consensus        12 ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a~~~   91 (307)
                      |||||||||||++|++.|+++|+ +|++++|++.........      .+    .|+.. +...+.+.++|+|||+|+..
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~------~~----~~~~~-~~~~~~~~~~D~Vvh~a~~~   68 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGH-EVTILTRSPPAGANTKWE------GY----KPWAP-LAESEALEGADAVINLAGEP   68 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCC-EEEEEeCCCCCCCcccce------ee----ecccc-cchhhhcCCCCEEEECCCCC
Confidence            68999999999999999999999 999999977654322110      11    12222 34556678999999999975


Q ss_pred             CCCC--CCChhhhhhhhhHHHHHHHHHHHHhcCCc--EEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHH
Q 021819           92 TLED--PVDPEKELILPAVQGTLNVLEAAKRFGVR--RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (307)
Q Consensus        92 ~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (307)
                      ....  ..+.....+++|+.++.+++++|++.+++  .+|+.|| ..+|+...  ..+++|+++..+.      +.|+..
T Consensus        69 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~-~~~yg~~~--~~~~~E~~~~~~~------~~~~~~  139 (292)
T TIGR01777        69 IADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASA-VGYYGTSE--DRVFTEEDSPAGD------DFLAEL  139 (292)
T ss_pred             cccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeee-EEEeCCCC--CCCcCcccCCCCC------ChHHHH
Confidence            4321  11234678889999999999999999864  3554444 34555433  2567888743332      346666


Q ss_pred             HHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHH--HcCCCCCCCCcccCcccHHHHHHHHHHhhcCC
Q 021819          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQL--LQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (307)
Q Consensus       168 K~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~  245 (307)
                      +...|..+..+ ++.+++++++||+.+||+....    ...+....  ..+.+...++..++++|++|+|+++..+++++
T Consensus       140 ~~~~e~~~~~~-~~~~~~~~ilR~~~v~G~~~~~----~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~  214 (292)
T TIGR01777       140 CRDWEEAAQAA-EDLGTRVVLLRTGIVLGPKGGA----LAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENA  214 (292)
T ss_pred             HHHHHHHhhhc-hhcCCceEEEeeeeEECCCcch----hHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHhcCc
Confidence            66666655433 3468999999999999996421    12222111  11222333557899999999999999999887


Q ss_pred             CCCceEEec-CCcccHHHHHHHHHHhCCCCCCCccccCCc
Q 021819          246 AASGRYLCT-NGIYQFGDFAERVSKLFPEFPVHRFVFQSP  284 (307)
Q Consensus       246 ~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (307)
                      ...|.|+++ ++.+++.|+++.+.+.+ +.+.+.+.|.+.
T Consensus       215 ~~~g~~~~~~~~~~s~~di~~~i~~~~-g~~~~~~~p~~~  253 (292)
T TIGR01777       215 SISGPVNATAPEPVRNKEFAKALARAL-HRPAFFPVPAFV  253 (292)
T ss_pred             ccCCceEecCCCccCHHHHHHHHHHHh-CCCCcCcCCHHH
Confidence            767888875 57799999999999999 655555555443

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.97  E-value=9.4e-29  Score=220.22  Aligned_cols=244  Identities=16%  Similarity=0.098  Sum_probs=178.2

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcc---cccCCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH---LFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      .++++|+|||||||||+++++.|+++|+ +|++++|+......   ........ .+++++.+|++|++++.++++    
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~-~~v~~v~~Dl~d~~~l~~~~~~~~~  135 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKEL-PGAEVVFGDVTDADSLRKVLFSEGD  135 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhc-CCceEEEeeCCCHHHHHHHHHHhCC
Confidence            3477999999999999999999999999 99999997643221   00010001 168899999999999999987    


Q ss_pred             CccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcc
Q 021819           80 GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKS  159 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~  159 (307)
                      ++|+||||++....     .....+++|+.++.+++++|++.++++||++||.+. +.  ..                  
T Consensus       136 ~~D~Vi~~aa~~~~-----~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v-~~--p~------------------  189 (390)
T PLN02657        136 PVDVVVSCLASRTG-----GVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICV-QK--PL------------------  189 (390)
T ss_pred             CCcEEEECCccCCC-----CCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccc-cC--cc------------------
Confidence            59999999875321     123456789999999999999999999999999653 21  10                  


Q ss_pred             cCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCC-CCC--ccc-CcccHHHHH
Q 021819          160 RKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEY--HWL-GAVPVKDVA  235 (307)
Q Consensus       160 ~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~-~~i~~~dva  235 (307)
                        ..|..+|...|+.+..  ...+++++++||+.+|++.        ..++.....+.+.. .++  ..+ ++||++|+|
T Consensus       190 --~~~~~sK~~~E~~l~~--~~~gl~~tIlRp~~~~~~~--------~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA  257 (390)
T PLN02657        190 --LEFQRAKLKFEAELQA--LDSDFTYSIVRPTAFFKSL--------GGQVEIVKDGGPYVMFGDGKLCACKPISEADLA  257 (390)
T ss_pred             --hHHHHHHHHHHHHHHh--ccCCCCEEEEccHHHhccc--------HHHHHhhccCCceEEecCCcccccCceeHHHHH
Confidence              3588999999988764  2479999999999999753        22344455566543 333  223 579999999


Q ss_pred             HHHHHhhcCCCCC-ceEEecC--CcccHHHHHHHHHHhCCCCCCC-ccccCCchHHHHHH
Q 021819          236 KAQVLLFESPAAS-GRYLCTN--GIYQFGDFAERVSKLFPEFPVH-RFVFQSPLRFILWL  291 (307)
Q Consensus       236 ~~~~~~~~~~~~~-g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  291 (307)
                      ++++.++.++... +.|++++  +.+|+.|+++.+.+.+ +.+.. ...+.+......++
T Consensus       258 ~~i~~~~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~l-G~~~~~~~vp~~~~~~~~~~  316 (390)
T PLN02657        258 SFIADCVLDESKINKVLPIGGPGKALTPLEQGEMLFRIL-GKEPKFFKVPIQIMDFAIGV  316 (390)
T ss_pred             HHHHHHHhCccccCCEEEcCCCCcccCHHHHHHHHHHHh-CCCCceEEcCHHHHHHHHHH
Confidence            9999999766543 4688765  4799999999999999 44433 23344444443333

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.5e-28  Score=234.34  Aligned_cols=249  Identities=25%  Similarity=0.265  Sum_probs=177.8

Q ss_pred             cEEEEeCCchhhHHHHHHHHH--HCCCCeEEEEeCCCCCCcccccCCC-CCCCceEEEEcccCCh------hHHHHHhcC
Q 021819           10 ETVCVTGANGFIGTWLVKTLL--DNNYTSINATVFPGSDSSHLFALPG-AGDANLRVFEADVLDS------GAVSRAVEG   80 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~--~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~i~~D~~d~------~~~~~~~~~   80 (307)
                      |+|||||||||||++|+++|+  +.|+ +|++++|+.... .+..+.. ....+++++.+|++|+      +.++++ ++
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~-~V~~l~R~~~~~-~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~   77 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREA-TVHVLVRRQSLS-RLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GD   77 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCC-EEEEEECcchHH-HHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cC
Confidence            389999999999999999999  4688 999999964322 1111100 0112689999999984      456555 89


Q ss_pred             ccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhccc
Q 021819           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR  160 (307)
Q Consensus        81 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  160 (307)
                      +|+|||||+.....   .......++|+.++.+++++|++.++++|||+||... ++...   ...+|+++..+.   ..
T Consensus        78 ~D~Vih~Aa~~~~~---~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v-~g~~~---~~~~e~~~~~~~---~~  147 (657)
T PRK07201         78 IDHVVHLAAIYDLT---ADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAV-AGDYE---GVFREDDFDEGQ---GL  147 (657)
T ss_pred             CCEEEECceeecCC---CCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEecccc-ccCcc---Cccccccchhhc---CC
Confidence            99999999975542   2346778999999999999999998999999999664 43222   234555432221   12


Q ss_pred             CccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCc------chHHHHHHHHcCCCC--C---CCCcccCcc
Q 021819          161 KKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLN------ASCAVLQQLLQGSKD--T---QEYHWLGAV  229 (307)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~------~~~~~~~~~~~~~~~--~---~~~~~~~~i  229 (307)
                      .+.|+.+|.++|.++++   ..+++++++||+.|||+...+...      .+..++... ...+.  .   .+....+++
T Consensus       148 ~~~Y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v  223 (657)
T PRK07201        148 PTPYHRTKFEAEKLVRE---ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKL-AKLPSWLPMVGPDGGRTNIV  223 (657)
T ss_pred             CCchHHHHHHHHHHHHH---cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHh-ccCCcccccccCCCCeeeee
Confidence            25799999999999864   358999999999999987543211      112223332 11111  1   123567899


Q ss_pred             cHHHHHHHHHHhhcCCCCCc-eEEecC-CcccHHHHHHHHHHhCCCCCC
Q 021819          230 PVKDVAKAQVLLFESPAASG-RYLCTN-GIYQFGDFAERVSKLFPEFPV  276 (307)
Q Consensus       230 ~~~dva~~~~~~~~~~~~~g-~~~~~~-~~~~~~~~~~~~~~~~~~~~~  276 (307)
                      |++|+++++..+++.+...| .|++++ +++++.|+++.+.+.+ +.+.
T Consensus       224 ~vddva~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~-g~~~  271 (657)
T PRK07201        224 PVDYVADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAA-GAPP  271 (657)
T ss_pred             eHHHHHHHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHh-CCCc
Confidence            99999999999988665544 688764 7899999999999999 4443

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.96  E-value=1e-27  Score=193.73  Aligned_cols=255  Identities=19%  Similarity=0.187  Sum_probs=208.9

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC--c--ccccCCCCCCCceEEEEcccCChhHHHHHhc--Ccc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--S--HLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCK   82 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~--~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d   82 (307)
                      +|+.||||.||+-|+.|++.|+++|+ +|.++.|+.+..  .  ++..++...+.+++++.+|++|...+.++++  ++|
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY-~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~Pd   80 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGY-EVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPD   80 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCc-EEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCch
Confidence            57999999999999999999999999 999999964332  2  2333343344468899999999999999987  679


Q ss_pred             EEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCC--cEEEEecCcceeccCCCCCCcccccCCCCchhhhccc
Q 021819           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV--RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR  160 (307)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  160 (307)
                      -|+|+|+.+.+..+.+.+....+++..|+.+|+++.+-.+.  .+|...|| +..|+...  ..|.+|++|..|.     
T Consensus        81 EIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQASt-SE~fG~v~--~~pq~E~TPFyPr-----  152 (345)
T COG1089          81 EIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQAST-SELYGLVQ--EIPQKETTPFYPR-----  152 (345)
T ss_pred             hheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEeccc-HHhhcCcc--cCccccCCCCCCC-----
Confidence            99999999999999999999999999999999999998764  36767666 77777655  3789999988886     


Q ss_pred             CccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC--CcchHHHHHHHHcCCCCC--CCC--cccCcccHHHH
Q 021819          161 KKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY--LNASCAVLQQLLQGSKDT--QEY--HWLGAVPVKDV  234 (307)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~--~~~--~~~~~i~~~dv  234 (307)
                       +||+.+|..+.++...+.+.+|+-.+.-...+--+|.....  ...+...+.++..|....  +++  ..+||-|+.|.
T Consensus       153 -SPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DY  231 (345)
T COG1089         153 -SPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDY  231 (345)
T ss_pred             -CHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHH
Confidence             79999999999999999999999988777777777765443  345556666676666543  343  89999999999


Q ss_pred             HHHHHHhhcCCCCCceEEecCCcccHHHHHHHHHHhCCCC
Q 021819          235 AKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEF  274 (307)
Q Consensus       235 a~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  274 (307)
                      +++++.+++.+......+.+++..+++|+++.-.+.. ++
T Consensus       232 Ve~mwlmLQq~~PddyViATg~t~sVrefv~~Af~~~-g~  270 (345)
T COG1089         232 VEAMWLMLQQEEPDDYVIATGETHSVREFVELAFEMV-GI  270 (345)
T ss_pred             HHHHHHHHccCCCCceEEecCceeeHHHHHHHHHHHc-Cc
Confidence            9999999998885444467889999999999999888 53

>PLN02778 3,5-epimerase/4-reductase

Probab=99.96  E-value=2.8e-27  Score=203.83  Aligned_cols=219  Identities=14%  Similarity=0.178  Sum_probs=158.5

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~vi~   86 (307)
                      .|+||||||+||||++|++.|+++|+ +|+...                        .|+.|.+.+...++  ++|+|||
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~-~V~~~~------------------------~~~~~~~~v~~~l~~~~~D~ViH   63 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGI-DFHYGS------------------------GRLENRASLEADIDAVKPTHVFN   63 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCC-EEEEec------------------------CccCCHHHHHHHHHhcCCCEEEE
Confidence            46899999999999999999999999 775321                        34455566666665  6899999


Q ss_pred             eccCCCCCC---CCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCC----CCcccccCCCCchhhhcc
Q 021819           87 VASPCTLED---PVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW----KGKVFDETSWTDLEYCKS  159 (307)
Q Consensus        87 ~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~----~~~~~~E~~~~~~~~~~~  159 (307)
                      +||......   ...++.+.+++|+.++.+++++|++.+++ ++++||.. +|+....    .+.+++|++++.+.    
T Consensus        64 ~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~~-vy~~~~~~p~~~~~~~~Ee~~p~~~----  137 (298)
T PLN02778         64 AAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV-LTNYATGC-IFEYDDAHPLGSGIGFKEEDTPNFT----  137 (298)
T ss_pred             CCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEecce-EeCCCCCCCcccCCCCCcCCCCCCC----
Confidence            999764321   23456789999999999999999999986 45566644 4433210    12347777654332    


Q ss_pred             cCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHH
Q 021819          160 RKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQV  239 (307)
Q Consensus       160 ~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~  239 (307)
                       .++|+.+|.++|.++..++     +..++|+..++++....    ...++..+..+.....  ...++++++|++++++
T Consensus       138 -~s~Yg~sK~~~E~~~~~y~-----~~~~lr~~~~~~~~~~~----~~~fi~~~~~~~~~~~--~~~s~~yv~D~v~al~  205 (298)
T PLN02778        138 -GSFYSKTKAMVEELLKNYE-----NVCTLRVRMPISSDLSN----PRNFITKITRYEKVVN--IPNSMTILDELLPISI  205 (298)
T ss_pred             -CCchHHHHHHHHHHHHHhh-----ccEEeeecccCCccccc----HHHHHHHHHcCCCeeE--cCCCCEEHHHHHHHHH
Confidence             2579999999999997653     45678887777764221    1235666666654322  1247999999999999


Q ss_pred             HhhcCCCCCceEEec-CCcccHHHHHHHHHHhC
Q 021819          240 LLFESPAASGRYLCT-NGIYQFGDFAERVSKLF  271 (307)
Q Consensus       240 ~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~  271 (307)
                      .++++.. .|.||++ ++.+++.|+++.+.+.+
T Consensus       206 ~~l~~~~-~g~yNigs~~~iS~~el~~~i~~~~  237 (298)
T PLN02778        206 EMAKRNL-TGIYNFTNPGVVSHNEILEMYRDYI  237 (298)
T ss_pred             HHHhCCC-CCeEEeCCCCcccHHHHHHHHHHHh
Confidence            9997644 4789875 56799999999999999

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.96  E-value=7.4e-29  Score=208.51  Aligned_cols=218  Identities=27%  Similarity=0.278  Sum_probs=131.0

Q ss_pred             EeCCchhhHHHHHHHHHHCCCC-eEEEEeCCCCCCc---cc-ccCCCC---------CCCceEEEEcccCCh------hH
Q 021819           14 VTGANGFIGTWLVKTLLDNNYT-SINATVFPGSDSS---HL-FALPGA---------GDANLRVFEADVLDS------GA   73 (307)
Q Consensus        14 ItGatG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~---~~-~~~~~~---------~~~~~~~i~~D~~d~------~~   73 (307)
                      |||||||+|++|+++|++++.. +|+|+.|..+...   .+ ..+...         ...+++++.+|++++      ++
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            7999999999999999998652 8999999764422   22 111100         023899999999875      56


Q ss_pred             HHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCC--CCcc--cccC
Q 021819           74 VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW--KGKV--FDET  149 (307)
Q Consensus        74 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~--~~~~--~~E~  149 (307)
                      +..+.+++|+|||||+.....   .+..+..+.|+.|+.++++.|.+.+.++|+|+|| +.+.+....  .+..  ..|.
T Consensus        81 ~~~L~~~v~~IiH~Aa~v~~~---~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iST-a~v~~~~~~~~~~~~~~~~~~  156 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAASVNFN---APYSELRAVNVDGTRNLLRLAAQGKRKRFHYIST-AYVAGSRPGTIEEKVYPEEED  156 (249)
T ss_dssp             HHHHHHH--EEEE--SS-SBS----S--EEHHHHHHHHHHHHHHHTSSS---EEEEEE-GGGTTS-TTT--SSS-HHH--
T ss_pred             hhccccccceeeecchhhhhc---ccchhhhhhHHHHHHHHHHHHHhccCcceEEecc-ccccCCCCCcccccccccccc
Confidence            777888999999999988763   3556789999999999999999777679999999 444443331  0111  1111


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC---CcchHHHHHHH-HcCCCCCC---C
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQL-LQGSKDTQ---E  222 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~---~~~~~~~~~~~-~~~~~~~~---~  222 (307)
                      .   ........+.|..||+.+|.++++++++.|++++|+|||.|+|+..++.   ......++... ..+.....   +
T Consensus       157 ~---~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~  233 (249)
T PF07993_consen  157 D---LDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDP  233 (249)
T ss_dssp             E---EE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB--
T ss_pred             c---chhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCC
Confidence            1   1111223368999999999999999888899999999999999655543   22233344333 33333222   2


Q ss_pred             CcccCcccHHHHHHHH
Q 021819          223 YHWLGAVPVKDVAKAQ  238 (307)
Q Consensus       223 ~~~~~~i~~~dva~~~  238 (307)
                      ....+++++|.+|++|
T Consensus       234 ~~~~d~vPVD~va~aI  249 (249)
T PF07993_consen  234 DARLDLVPVDYVARAI  249 (249)
T ss_dssp             -TT--EEEHHHHHHHH
T ss_pred             CceEeEECHHHHHhhC
Confidence            3569999999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN00016 RNA-binding protein; Provisional

Probab=99.96  E-value=2.4e-27  Score=211.31  Aligned_cols=228  Identities=20%  Similarity=0.227  Sum_probs=169.1

Q ss_pred             CCcEEEEe----CCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccC-----CCCCCCceEEEEcccCChhHHHHHh
Q 021819            8 EEETVCVT----GANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-----PGAGDANLRVFEADVLDSGAVSRAV   78 (307)
Q Consensus         8 ~~~~ilIt----GatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~i~~D~~d~~~~~~~~   78 (307)
                      .+++|+||    |||||||++|++.|+++|+ +|++++|+..........     ......+++++.+|+.|   +.+++
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~  126 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGH-EVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKV  126 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCC-EEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhhh
Confidence            35789999    9999999999999999999 999999976542211100     00001158889999977   33443


Q ss_pred             --cCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhh
Q 021819           79 --EGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEY  156 (307)
Q Consensus        79 --~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~  156 (307)
                        .++|+|||+++.                +..++.+++++|++.|+++|||+||.+ +|+...  ..+..|+++..+. 
T Consensus       127 ~~~~~d~Vi~~~~~----------------~~~~~~~ll~aa~~~gvkr~V~~SS~~-vyg~~~--~~p~~E~~~~~p~-  186 (378)
T PLN00016        127 AGAGFDVVYDNNGK----------------DLDEVEPVADWAKSPGLKQFLFCSSAG-VYKKSD--EPPHVEGDAVKPK-  186 (378)
T ss_pred             ccCCccEEEeCCCC----------------CHHHHHHHHHHHHHcCCCEEEEEccHh-hcCCCC--CCCCCCCCcCCCc-
Confidence              478999998652                134688999999999999999999965 455332  2456777654442 


Q ss_pred             hcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC---CCcccCcccHHH
Q 021819          157 CKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKD  233 (307)
Q Consensus       157 ~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~d  233 (307)
                              . +|..+|.+++    +.+++++++||+++||+....  .....++.++..+.+..+   +.+.++++|++|
T Consensus       187 --------~-sK~~~E~~l~----~~~l~~~ilRp~~vyG~~~~~--~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~D  251 (378)
T PLN00016        187 --------A-GHLEVEAYLQ----KLGVNWTSFRPQYIYGPGNNK--DCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKD  251 (378)
T ss_pred             --------c-hHHHHHHHHH----HcCCCeEEEeceeEECCCCCC--chHHHHHHHHHcCCceeecCCCCeeeceecHHH
Confidence                    1 7999998875    568999999999999997543  233455666677766544   346789999999


Q ss_pred             HHHHHHHhhcCCCC-CceEEecC-CcccHHHHHHHHHHhCCCCC
Q 021819          234 VAKAQVLLFESPAA-SGRYLCTN-GIYQFGDFAERVSKLFPEFP  275 (307)
Q Consensus       234 va~~~~~~~~~~~~-~g~~~~~~-~~~~~~~~~~~~~~~~~~~~  275 (307)
                      +|++++.+++++.. ++.|++++ +.+++.|+++.+.+.+ +.+
T Consensus       252 va~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~-g~~  294 (378)
T PLN00016        252 LASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAA-GFP  294 (378)
T ss_pred             HHHHHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHh-CCC
Confidence            99999999988654 35688765 6799999999999998 443

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.96  E-value=8.1e-27  Score=188.78  Aligned_cols=246  Identities=20%  Similarity=0.246  Sum_probs=177.2

Q ss_pred             EEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-CccEEEEeccC
Q 021819           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-GCKGVFHVASP   90 (307)
Q Consensus        12 ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-~~d~vi~~a~~   90 (307)
                      |+|||||||||++|+..|.+.|+ +|+.+.|+++........      .+       ..-+.+.+... ++|+|||+||.
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh-~v~iltR~~~~~~~~~~~------~v-------~~~~~~~~~~~~~~DavINLAG~   66 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGH-QVTILTRRPPKASQNLHP------NV-------TLWEGLADALTLGIDAVINLAGE   66 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCC-eEEEEEcCCcchhhhcCc------cc-------cccchhhhcccCCCCEEEECCCC
Confidence            68999999999999999999999 999999988765443221      11       12234445555 79999999998


Q ss_pred             CCCCC-CCCh-hhhhhhhhHHHHHHHHHHHHhcC--CcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHH
Q 021819           91 CTLED-PVDP-EKELILPAVQGTLNVLEAAKRFG--VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (307)
Q Consensus        91 ~~~~~-~~~~-~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (307)
                      .-... +... .+...+.-+..|..|.++..+..  .+-+|. +|+.++|+...  +..++|++++...+         .
T Consensus        67 ~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~is-aSAvGyYG~~~--~~~~tE~~~~g~~F---------l  134 (297)
T COG1090          67 PIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLIS-ASAVGYYGHSG--DRVVTEESPPGDDF---------L  134 (297)
T ss_pred             ccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEe-cceEEEecCCC--ceeeecCCCCCCCh---------H
Confidence            66544 2222 25667777899999999998654  333444 44566777766  38899997655542         1


Q ss_pred             HHHHHH--HHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHH--HHHHcCCCCCCCCcccCcccHHHHHHHHHHhh
Q 021819          167 SKTLAE--KAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVL--QQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLF  242 (307)
Q Consensus       167 sK~~~e--~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~  242 (307)
                      ++...+  +... .++..|.+++.+|.|+|.++....-    ..++  .+..-|.++..+.++++|||++|++++|.+++
T Consensus       135 a~lc~~WE~~a~-~a~~~gtRvvllRtGvVLs~~GGaL----~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll  209 (297)
T COG1090         135 AQLCQDWEEEAL-QAQQLGTRVVLLRTGVVLSPDGGAL----GKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLL  209 (297)
T ss_pred             HHHHHHHHHHHh-hhhhcCceEEEEEEEEEecCCCcch----hhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHH
Confidence            121111  1111 1223489999999999999764322    2222  24455677777889999999999999999999


Q ss_pred             cCCCCCceEEec-CCcccHHHHHHHHHHhCCCCCCCccccCCchHHHH
Q 021819          243 ESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFPVHRFVFQSPLRFIL  289 (307)
Q Consensus       243 ~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (307)
                      ++....|.||++ +.+++..++.+.+.+++ ++|...+.|+...++..
T Consensus       210 ~~~~lsGp~N~taP~PV~~~~F~~al~r~l-~RP~~~~vP~~~~rl~L  256 (297)
T COG1090         210 ENEQLSGPFNLTAPNPVRNKEFAHALGRAL-HRPAILPVPSFALRLLL  256 (297)
T ss_pred             hCcCCCCcccccCCCcCcHHHHHHHHHHHh-CCCccccCcHHHHHHHh
Confidence            999999998865 68999999999999999 88888888876655543

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.95  E-value=1.1e-26  Score=186.06  Aligned_cols=212  Identities=20%  Similarity=0.193  Sum_probs=165.3

Q ss_pred             cccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         5 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      ...+.|.++|||||++||.++++.|.+.|+ +|++..|+.+..+.++.....  ..+..+..|++|.++++++++     
T Consensus         2 ~~~~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~   78 (246)
T COG4221           2 TTLKGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEE   78 (246)
T ss_pred             CCCCCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHh
Confidence            344568999999999999999999999999 999999988877766554332  268899999999988666654     


Q ss_pred             --CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                        ++|++|||||.+..    ....++|..++++|+.|.++..++.    .+++.++||++||+++.+.+++.        
T Consensus        79 ~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~--------  150 (246)
T COG4221          79 FGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGG--------  150 (246)
T ss_pred             hCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCC--------
Confidence              68999999998875    2234578999999999988888876    45566799999999998887775        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCC-cchHHHHHHHHcCCCCCCCCcc
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYL-NASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                                  +.|+.||+....+...+..+.   +++++.+.||.|-+...+... ........+.+.+         
T Consensus       151 ------------~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~---------  209 (246)
T COG4221         151 ------------AVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKG---------  209 (246)
T ss_pred             ------------ccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhcc---------
Confidence                        789999999998887776554   899999999999665433321 1122233333332         


Q ss_pred             cCcccHHHHHHHHHHhhcCCCCC
Q 021819          226 LGAVPVKDVAKAQVLLFESPAAS  248 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~~~~  248 (307)
                      ...+.++|+|+++.++++.|..-
T Consensus       210 ~~~l~p~dIA~~V~~~~~~P~~v  232 (246)
T COG4221         210 GTALTPEDIAEAVLFAATQPQHV  232 (246)
T ss_pred             CCCCCHHHHHHHHHHHHhCCCcc
Confidence            34689999999999999998753

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.95  E-value=1.9e-26  Score=212.08  Aligned_cols=252  Identities=16%  Similarity=0.161  Sum_probs=174.5

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCC--CeEEEEeCCCCCCcccccC----C------------CC-----CCCceEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNY--TSINATVFPGSDSSHLFAL----P------------GA-----GDANLRV   63 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~--~~V~~~~r~~~~~~~~~~~----~------------~~-----~~~~~~~   63 (307)
                      .++|+|||||||||||++|++.|++.+.  .+|+++.|.+........+    .            ..     ...++..
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            3579999999999999999999998753  4789999965433211111    0            00     0127899


Q ss_pred             EEcccCCh------hHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhc-CCcEEEEecCcceec
Q 021819           64 FEADVLDS------GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIV  136 (307)
Q Consensus        64 i~~D~~d~------~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~iSS~~~~~  136 (307)
                      +.+|++++      +..+.+.+++|+|||+|+....   ..+....+++|+.|+.+++++|++. ++++|||+||.. ++
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f---~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTay-Vy  272 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTF---DERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAY-VN  272 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHhcCCEEEECcccccc---ccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCce-ee
Confidence            99999986      4566677889999999998664   2456788999999999999999886 478899999955 45


Q ss_pred             cCCCCCCcccccCCCC----------------------c-------------------------------hhhhcccCcc
Q 021819          137 PNPGWKGKVFDETSWT----------------------D-------------------------------LEYCKSRKKW  163 (307)
Q Consensus       137 ~~~~~~~~~~~E~~~~----------------------~-------------------------------~~~~~~~~~~  163 (307)
                      +...   ..+.|...+                      +                               +.....+.+.
T Consensus       273 G~~~---G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNt  349 (605)
T PLN02503        273 GQRQ---GRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDT  349 (605)
T ss_pred             cCCC---CeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCCh
Confidence            5432   122332221                      0                               0011122378


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCcEEEEecCce----------eCCCCCCCCcchHHHHHHHHcCCCC---CCCCcccCccc
Q 021819          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATC----------LGPLMQPYLNASCAVLQQLLQGSKD---TQEYHWLGAVP  230 (307)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v----------~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~  230 (307)
                      |..||.++|.++++.  ..+++++|+||+.|          ++++....    ...+.....|...   ..++...|.|+
T Consensus       350 Yt~TK~lAE~lV~~~--~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~----~p~~~~~g~G~lr~~~~~~~~~~DiVP  423 (605)
T PLN02503        350 YVFTKAMGEMVINSM--RGDIPVVIIRPSVIESTWKDPFPGWMEGNRMM----DPIVLYYGKGQLTGFLADPNGVLDVVP  423 (605)
T ss_pred             HHHHHHHHHHHHHHh--cCCCCEEEEcCCEecccccCCccccccCcccc----chhhhheeccceeEEEeCCCeeEeEEe
Confidence            999999999999855  35899999999999          44433222    1111112233221   12457889999


Q ss_pred             HHHHHHHHHHhhcC-C---C-CCceEEec-C--CcccHHHHHHHHHHhC
Q 021819          231 VKDVAKAQVLLFES-P---A-ASGRYLCT-N--GIYQFGDFAERVSKLF  271 (307)
Q Consensus       231 ~~dva~~~~~~~~~-~---~-~~g~~~~~-~--~~~~~~~~~~~~~~~~  271 (307)
                      +|.++.+++.++.. .   . ...+||++ +  +++++.++.+.+.+.+
T Consensus       424 VD~vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~  472 (605)
T PLN02503        424 ADMVVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHY  472 (605)
T ss_pred             ecHHHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHH
Confidence            99999999888432 1   1 22469875 4  5799999999999877

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.95  E-value=1.2e-26  Score=196.87  Aligned_cols=223  Identities=19%  Similarity=0.182  Sum_probs=156.4

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      ++++|+++||||+|+||+++++.|+++|+ +|++++|+++..+.... +..... ++.++++|++|.+++.++++     
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGG-KAIGVAMDVTNEDAVNAGIDKVAER   81 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCc-eEEEEECCCCCHHHHHHHHHHHHHH
Confidence            44578999999999999999999999999 89999997654433222 111112 57889999999998887765     


Q ss_pred             --CccEEEEeccCCCCCC----CCChhhhhhhhhHHH----HHHHHHHH-HhcCCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 --GCKGVFHVASPCTLED----PVDPEKELILPAVQG----TLNVLEAA-KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~----~~~l~~~~-~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                        ++|+||||||......    ..+.+...+++|+.+    +.++++.+ ++.+.++||++||..+..+.+..       
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~-------  154 (262)
T PRK13394         82 FGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLK-------  154 (262)
T ss_pred             cCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCC-------
Confidence              3899999999754321    233456788899999    56666666 66677899999996654332221       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcc--------hHHHHHHHHcCC
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNA--------SCAVLQQLLQGS  217 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~--------~~~~~~~~~~~~  217 (307)
                                   ..|+.+|...+.+++.++++   .+++++++||+.++++........        ......+...+ 
T Consensus       155 -------------~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  220 (262)
T PRK13394        155 -------------SAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLG-  220 (262)
T ss_pred             -------------cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhc-
Confidence                         46999999888888877655   489999999999999864321000        01112222221 


Q ss_pred             CCCCCCcccCcccHHHHHHHHHHhhcCCC--CCce-EEecC
Q 021819          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (307)
Q Consensus       218 ~~~~~~~~~~~i~~~dva~~~~~~~~~~~--~~g~-~~~~~  255 (307)
                          .....++++++|+++++++++..+.  ..|. |++.+
T Consensus       221 ----~~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~  257 (262)
T PRK13394        221 ----KTVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSH  257 (262)
T ss_pred             ----CCCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCC
Confidence                1235789999999999999987543  2355 44443

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.9e-26  Score=194.64  Aligned_cols=232  Identities=21%  Similarity=0.203  Sum_probs=164.8

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------Ccc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GCK   82 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~~d   82 (307)
                      |+++||||+|+||++++++|+++|+ +|+++.|+.+..+.+.....   .++.++++|++|.+++.++++       ++|
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYG---DRLWVLQLDVTDSAAVRAVVDRAFAALGRID   78 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcc---CceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            6899999999999999999999999 89999987654433322111   168899999999998887764       479


Q ss_pred             EEEEeccCCCCCCC----CChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCCCch
Q 021819           83 GVFHVASPCTLEDP----VDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (307)
Q Consensus        83 ~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~  154 (307)
                      +||||||.......    .+.+.+.+++|+.++.++++++    ++.+.++||++||..+..+.+.              
T Consensus        79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------  144 (276)
T PRK06482         79 VVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPG--------------  144 (276)
T ss_pred             EEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCC--------------
Confidence            99999997654221    2345678899999999999997    5556789999999665433222              


Q ss_pred             hhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCce---eCCCCCCC------CcchHHHHHHHHcCCCCCCC
Q 021819          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATC---LGPLMQPY------LNASCAVLQQLLQGSKDTQE  222 (307)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v---~g~~~~~~------~~~~~~~~~~~~~~~~~~~~  222 (307)
                            .+.|+.+|...|.+.+.++++   ++++++++|||.+   +|+.....      .......+.+......    
T Consensus       145 ------~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  214 (276)
T PRK06482        145 ------FSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGS----  214 (276)
T ss_pred             ------CchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhcc----
Confidence                  157999999999999888765   5999999999988   44332211      0111112222222211    


Q ss_pred             CcccCcccHHHHHHHHHHhhcCCCCCceEEecC-CcccHHHHHHHHHHhC
Q 021819          223 YHWLGAVPVKDVAKAQVLLFESPAASGRYLCTN-GIYQFGDFAERVSKLF  271 (307)
Q Consensus       223 ~~~~~~i~~~dva~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~  271 (307)
                        ..-+.+++|++++++.+++.+.....|+++. ...++.+++..+.+..
T Consensus       215 --~~~~~d~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  262 (276)
T PRK06482        215 --FAIPGDPQKMVQAMIASADQTPAPRRLTLGSDAYASIRAALSERLAAL  262 (276)
T ss_pred             --CCCCCCHHHHHHHHHHHHcCCCCCeEEecChHHHHHHHHHHHHHHHHH
Confidence              1124689999999999998766555687764 4567766666555544

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.95  E-value=3.6e-26  Score=193.51  Aligned_cols=255  Identities=24%  Similarity=0.189  Sum_probs=174.3

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccC----------CCCCCCceEEEEcccC------ChhH
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL----------PGAGDANLRVFEADVL------DSGA   73 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~----------~~~~~~~~~~i~~D~~------d~~~   73 (307)
                      +++|+||||||+|++|+..|+.+-..+|+|++|..+.+....++          .....++++.+.+|+.      +...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            47999999999999999999988545899999976643322221          1122338999999997      4566


Q ss_pred             HHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCC-CcccccCCCC
Q 021819           74 VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWK-GKVFDETSWT  152 (307)
Q Consensus        74 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~-~~~~~E~~~~  152 (307)
                      +.++.+.+|.|||+|+....   ..++.+....|+.||..+++.|...+.|.+.|+||++......... ..-.+|.++.
T Consensus        81 ~~~La~~vD~I~H~gA~Vn~---v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~  157 (382)
T COG3320          81 WQELAENVDLIIHNAALVNH---VFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPT  157 (382)
T ss_pred             HHHHhhhcceEEecchhhcc---cCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCcccccccccc
Confidence            88888899999999998664   4667899999999999999999998888999999987544332221 1112222222


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCC---cchHHHHHHHHcCCCCCCCCcccCcc
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL---NASCAVLQQLLQGSKDTQEYHWLGAV  229 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (307)
                      .... ....+.|+.||+.+|.+++..... |++++|+|||.|.|+..++..   .+...+......-...+......+.+
T Consensus       158 ~~~~-~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~~~~~~~~~  235 (382)
T COG3320         158 RNVG-QGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPDSEYSLDML  235 (382)
T ss_pred             cccc-CccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCCcccchhhC
Confidence            2211 223468999999999999988776 999999999999999886542   33444444444333322222233333


Q ss_pred             c-----------HHHHHHHHHHhhcCCC-CCceEE--ecCCcccHHHHHHHHHH
Q 021819          230 P-----------VKDVAKAQVLLFESPA-ASGRYL--CTNGIYQFGDFAERVSK  269 (307)
Q Consensus       230 ~-----------~~dva~~~~~~~~~~~-~~g~~~--~~~~~~~~~~~~~~~~~  269 (307)
                      +           +.-+++++..+...+. ...+|.  ..+..+.+.++.+.+.+
T Consensus       236 p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~  289 (382)
T COG3320         236 PVDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS  289 (382)
T ss_pred             ccceeeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence            3           3444444444443222 223455  33667899999988887

>PRK05865 hypothetical protein; Provisional

Probab=99.95  E-value=7.9e-26  Score=214.34  Aligned_cols=198  Identities=25%  Similarity=0.230  Sum_probs=155.8

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEecc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a~   89 (307)
                      |+|+|||||||||++|+++|+++|+ +|++++|+....  ..      . ++.++.+|++|.+++.++++++|+|||+|+
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~-~Vv~l~R~~~~~--~~------~-~v~~v~gDL~D~~~l~~al~~vD~VVHlAa   70 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGH-EVVGIARHRPDS--WP------S-SADFIAADIRDATAVESAMTGADVVAHCAW   70 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCchhh--cc------c-CceEEEeeCCCHHHHHHHHhCCCEEEECCC
Confidence            3799999999999999999999999 999999864321  10      1 578899999999999999999999999997


Q ss_pred             CCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHH
Q 021819           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (307)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (307)
                      ....         .+++|+.++.+++++|++.++++|||+||..                                  |.
T Consensus        71 ~~~~---------~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~----------------------------------K~  107 (854)
T PRK05865         71 VRGR---------NDHINIDGTANVLKAMAETGTGRIVFTSSGH----------------------------------QP  107 (854)
T ss_pred             cccc---------hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH----------------------------------HH
Confidence            6321         4689999999999999999999999999721                                  77


Q ss_pred             HHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCC--CcccCcccHHHHHHHHHHhhcCCC-
Q 021819          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE--YHWLGAVPVKDVAKAQVLLFESPA-  246 (307)
Q Consensus       170 ~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~dva~~~~~~~~~~~-  246 (307)
                      .+|.++.    .++++++++||++||||...       .++...........+  ...++|+|++|+|+++..+++++. 
T Consensus       108 aaE~ll~----~~gl~~vILRp~~VYGP~~~-------~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~  176 (854)
T PRK05865        108 RVEQMLA----DCGLEWVAVRCALIFGRNVD-------NWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVI  176 (854)
T ss_pred             HHHHHHH----HcCCCEEEEEeceEeCCChH-------HHHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCCc
Confidence            7887774    46999999999999999621       223332221112222  246799999999999999987543 


Q ss_pred             CCceEEec-CCcccHHHHHHHHHHhC
Q 021819          247 ASGRYLCT-NGIYQFGDFAERVSKLF  271 (307)
Q Consensus       247 ~~g~~~~~-~~~~~~~~~~~~~~~~~  271 (307)
                      ..+.||++ ++.+++.|+++.+.+..
T Consensus       177 ~ggvyNIgsg~~~Si~EIae~l~~~~  202 (854)
T PRK05865        177 DSGPVNLAAPGELTFRRIAAALGRPM  202 (854)
T ss_pred             CCCeEEEECCCcccHHHHHHHHhhhh
Confidence            45678765 56799999999988743

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.95  E-value=9e-26  Score=192.89  Aligned_cols=232  Identities=20%  Similarity=0.144  Sum_probs=169.4

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------Cc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~~   81 (307)
                      +|+|+||||+|+||++++++|+++|+ +|++++|+.+....+....   ...+.++++|++|++++.++++       .+
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKY---GDRLLPLALDVTDRAAVFAAVETAVEHFGRL   78 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhc---cCCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999 8999999765443332211   1157888999999988877765       56


Q ss_pred             cEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCCCc
Q 021819           82 KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (307)
Q Consensus        82 d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~  153 (307)
                      |+||||||.....    ...+.+.+.+++|+.++.++++++    ++.+.+++|++||..+..+.+..            
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~------------  146 (275)
T PRK08263         79 DIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMS------------  146 (275)
T ss_pred             CEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCc------------
Confidence            9999999976542    223456889999999998888876    45667899999997765544332            


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCC------cchHHHHHHHHcCCCCCCCCc
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL------NASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~  224 (307)
                              ..|+.+|...+.+.+.++.+   +|++++++|||.+.++......      ..............      .
T Consensus       147 --------~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~------~  212 (275)
T PRK08263        147 --------GIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQW------S  212 (275)
T ss_pred             --------cHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHH------H
Confidence                    57999999999988877765   6999999999999887642110      00111111111100      1


Q ss_pred             ccCc-ccHHHHHHHHHHhhcCCCCCceEEecCC--cccHHHHHHHHHHh
Q 021819          225 WLGA-VPVKDVAKAQVLLFESPAASGRYLCTNG--IYQFGDFAERVSKL  270 (307)
Q Consensus       225 ~~~~-i~~~dva~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~  270 (307)
                      ...+ ++++|+|++++.+++.+...+.|++..+  .+++.++.+.+.+.
T Consensus       213 ~~~~~~~p~dva~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (275)
T PRK08263        213 ERSVDGDPEAAAEALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATW  261 (275)
T ss_pred             hccCCCCHHHHHHHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHH
Confidence            2345 8999999999999998877777766543  57778888777764

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.4e-25  Score=191.91  Aligned_cols=222  Identities=18%  Similarity=0.132  Sum_probs=158.1

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------Cc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~~   81 (307)
                      +++++||||+|+||++++++|+++|+ +|++++|+++..+.+....   ..++..+.+|++|++++.++++       .+
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~---~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~   79 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALH---PDRALARLLDVTDFDAIDAVVADAEATFGPI   79 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhc---CCCeeEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            57899999999999999999999999 8999999765544333221   1167888999999999887776       47


Q ss_pred             cEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccCCCCc
Q 021819           82 KGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (307)
Q Consensus        82 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~  153 (307)
                      |+||||||......    ..+.+.+.+++|+.++.++++++.    +.+.+++|++||.++..+.++.            
T Consensus        80 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~------------  147 (277)
T PRK06180         80 DVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGI------------  147 (277)
T ss_pred             CEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCc------------
Confidence            99999999754321    223346779999999999999853    4456799999997765543332            


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCC----cchHHH---HHHHHcCCCCCCCC
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL----NASCAV---LQQLLQGSKDTQEY  223 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~----~~~~~~---~~~~~~~~~~~~~~  223 (307)
                              ..|+.+|...+.+.+.++.+   .|++++++|||.+.++......    .....+   ........   ...
T Consensus       148 --------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  216 (277)
T PRK06180        148 --------GYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAR---EAK  216 (277)
T ss_pred             --------chhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHH---Hhh
Confidence                    57999999999998887755   5999999999999886432210    011111   11110000   000


Q ss_pred             cccCcccHHHHHHHHHHhhcCCCCCceEEecCCc
Q 021819          224 HWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGI  257 (307)
Q Consensus       224 ~~~~~i~~~dva~~~~~~~~~~~~~g~~~~~~~~  257 (307)
                      ....+.+++|+|++++.+++.+.....|.++...
T Consensus       217 ~~~~~~~~~dva~~~~~~l~~~~~~~~~~~g~~~  250 (277)
T PRK06180        217 SGKQPGDPAKAAQAILAAVESDEPPLHLLLGSDA  250 (277)
T ss_pred             ccCCCCCHHHHHHHHHHHHcCCCCCeeEeccHHH
Confidence            1234578999999999999987665566655444

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.3e-25  Score=190.13  Aligned_cols=221  Identities=19%  Similarity=0.116  Sum_probs=153.0

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++.+|+.+..+... .+..... ++.++.+|++|.+++.++++     
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~   80 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGF-DVHGVMCDVRHREEVTHLADEAFRL   80 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-eEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999 8988888764433222 1111111 57889999999999888775     


Q ss_pred             --CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHH----hcC-CcEEEEecCcceeccCCCCCCccccc
Q 021819           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFG-VRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                        .+|+||||||.....    ...+.+.+.+++|+.++.++++++.    +.+ .+++|++||..+..+.+..       
T Consensus        81 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~-------  153 (275)
T PRK05876         81 LGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGL-------  153 (275)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCC-------
Confidence              479999999975432    2234457888999999999999874    343 4689999997765443332       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCC-CCCC--
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK-DTQE--  222 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~-~~~~--  222 (307)
                                   ..|+.+|...+.+.+.++.+   .|+++++++|+.+.++.........   ......... ...+  
T Consensus       154 -------------~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~  217 (275)
T PRK05876        154 -------------GAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIR---GAACAQSSTTGSPGPL  217 (275)
T ss_pred             -------------chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhc---Cccccccccccccccc
Confidence                         57999999866666555443   4899999999999887643220000   000000000 0111  


Q ss_pred             CcccCcccHHHHHHHHHHhhcCCCCCceEEec
Q 021819          223 YHWLGAVPVKDVAKAQVLLFESPAASGRYLCT  254 (307)
Q Consensus       223 ~~~~~~i~~~dva~~~~~~~~~~~~~g~~~~~  254 (307)
                      ....++++++|+|+.++..+.+++   .|++.
T Consensus       218 ~~~~~~~~~~dva~~~~~ai~~~~---~~~~~  246 (275)
T PRK05876        218 PLQDDNLGVDDIAQLTADAILANR---LYVLP  246 (275)
T ss_pred             cccccCCCHHHHHHHHHHHHHcCC---eEEec
Confidence            134578999999999999998653   35554

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.94  E-value=5e-25  Score=186.24  Aligned_cols=217  Identities=19%  Similarity=0.167  Sum_probs=154.9

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ++++|+++||||+|+||++++++|+++|+ +|++.+|+..+.+.+.........++.++++|++|+++++++++      
T Consensus         7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (255)
T PRK07523          7 DLTGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEI   85 (255)
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            45678999999999999999999999999 89999987654332221111111157889999999999888875      


Q ss_pred             -CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc----CCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                       .+|+|||+||.....    ...+.+++.+++|+.++.++++++.+.    +.+++|++||.....+.+..         
T Consensus        86 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~---------  156 (255)
T PRK07523         86 GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGI---------  156 (255)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCC---------
Confidence             479999999975432    123345788899999999999988643    56799999996553332221         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHH---hcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                                 ..|+.+|...+.+.+.++.   ++|++++++||+.+.++....... .......+....+      ...
T Consensus       157 -----------~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~-~~~~~~~~~~~~~------~~~  218 (255)
T PRK07523        157 -----------APYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVA-DPEFSAWLEKRTP------AGR  218 (255)
T ss_pred             -----------ccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhcc-CHHHHHHHHhcCC------CCC
Confidence                       5799999999999888775   458999999999999986432211 1111122222211      345


Q ss_pred             cccHHHHHHHHHHhhcCCC--CCce
Q 021819          228 AVPVKDVAKAQVLLFESPA--ASGR  250 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~~--~~g~  250 (307)
                      +.+++|+|+++++++....  ..|.
T Consensus       219 ~~~~~dva~~~~~l~~~~~~~~~G~  243 (255)
T PRK07523        219 WGKVEELVGACVFLASDASSFVNGH  243 (255)
T ss_pred             CcCHHHHHHHHHHHcCchhcCccCc
Confidence            7789999999999987533  3464

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.94  E-value=5.8e-25  Score=185.29  Aligned_cols=220  Identities=24%  Similarity=0.234  Sum_probs=157.7

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      ++|+|+||||+|+||++++++|+++|+ +|++++|+..+...... +..... ++.++.+|+.|.+++.++++       
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGG-KARARQVDVRDRAALKAAVAAGVEDFG   82 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            467999999999999999999999999 89999997543322211 111111 58889999999998888775       


Q ss_pred             CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCccee-ccCCCCCCcccccCC
Q 021819           80 GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAI-VPNPGWKGKVFDETS  150 (307)
Q Consensus        80 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~-~~~~~~~~~~~~E~~  150 (307)
                      .+|+|||+++....    ....+++...++.|+.++.++++++.    +.+.++||++||..+. .+.+.          
T Consensus        83 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~----------  152 (251)
T PRK12826         83 RLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPG----------  152 (251)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCC----------
Confidence            68999999987654    22233457789999999999999884    4456789999996653 22111          


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                                ...|+.+|...+.+++.++.+   .+++++++||+.++|+........  .+........+      ...
T Consensus       153 ----------~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~--~~~~~~~~~~~------~~~  214 (251)
T PRK12826        153 ----------LAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDA--QWAEAIAAAIP------LGR  214 (251)
T ss_pred             ----------ccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCch--HHHHHHHhcCC------CCC
Confidence                      146999999999999887655   489999999999999875433111  11112222222      235


Q ss_pred             cccHHHHHHHHHHhhcCCCC--Cce-EEecCCc
Q 021819          228 AVPVKDVAKAQVLLFESPAA--SGR-YLCTNGI  257 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~~~--~g~-~~~~~~~  257 (307)
                      +++++|+|++++.++..+..  .|. +++.++.
T Consensus       215 ~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~  247 (251)
T PRK12826        215 LGEPEDIAAAVLFLASDEARYITGQTLPVDGGA  247 (251)
T ss_pred             CcCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            78999999999998865432  354 5665543

>PRK06182 short chain dehydrogenase; Validated

Probab=99.94  E-value=8.6e-25  Score=186.65  Aligned_cols=214  Identities=18%  Similarity=0.177  Sum_probs=152.4

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------Cc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~~   81 (307)
                      +|+++||||+|+||++++++|+++|+ +|++++|+.+..+.+...      ++.++.+|++|++++.++++       ++
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~------~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i   75 (273)
T PRK06182          3 KKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASL------GVHPLSLDVTDEASIKAAVDTIIAEEGRI   75 (273)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhC------CCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            67999999999999999999999999 999999976544333221      57889999999999888776       68


Q ss_pred             cEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHH----HHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCc
Q 021819           82 KGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLE----AAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (307)
Q Consensus        82 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~----~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~  153 (307)
                      |+|||+||......    ..++++..+++|+.++.++++    .+++.+.+++|++||..+..+.+..            
T Consensus        76 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~------------  143 (273)
T PRK06182         76 DVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLG------------  143 (273)
T ss_pred             CEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCc------------
Confidence            99999999764321    234567889999988655544    5566777899999996553322221            


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHH---hcCCcEEEEecCceeCCCCCCCCc---------chHH----HHHHHHcCC
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLN---------ASCA----VLQQLLQGS  217 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~i~~~ivrp~~v~g~~~~~~~~---------~~~~----~~~~~~~~~  217 (307)
                              .+|+.+|...+.+.+.++.   ..++++++++||.+.++.......         ....    +...+....
T Consensus       144 --------~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (273)
T PRK06182        144 --------AWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTY  215 (273)
T ss_pred             --------cHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhh
Confidence                    4699999999998776654   358999999999998875321100         0000    001111100


Q ss_pred             CCCCCCcccCcccHHHHHHHHHHhhcCCCCCceEEecC
Q 021819          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTN  255 (307)
Q Consensus       218 ~~~~~~~~~~~i~~~dva~~~~~~~~~~~~~g~~~~~~  255 (307)
                            ....+.+++|+|+++++++........|+++.
T Consensus       216 ------~~~~~~~~~~vA~~i~~~~~~~~~~~~~~~g~  247 (273)
T PRK06182        216 ------GSGRLSDPSVIADAISKAVTARRPKTRYAVGF  247 (273)
T ss_pred             ------ccccCCCHHHHHHHHHHHHhCCCCCceeecCc
Confidence                  13456799999999999998765545566543

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.93  E-value=5.3e-25  Score=186.32  Aligned_cols=222  Identities=20%  Similarity=0.213  Sum_probs=153.5

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------C
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~   80 (307)
                      ++++++||||+|+||++++++|+++|+ +|++++|+++..+...........++..+.+|++|++++.++++       .
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            357999999999999999999999999 89999997665443322111111268889999999999888776       5


Q ss_pred             ccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           81 CKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        81 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      +|+|||+|+......    +.+.....+++|+.++.++++.+    ++.+.++||++||..+.++.++.           
T Consensus        82 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~-----------  150 (258)
T PRK12429         82 VDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGK-----------  150 (258)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCc-----------
Confidence            799999998754421    22334667889999966655555    55677899999997766554332           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCc--------chHHHHHHHHcCCCCCC
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN--------ASCAVLQQLLQGSKDTQ  221 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~--------~~~~~~~~~~~~~~~~~  221 (307)
                               +.|+.+|.+.+.+.+.++.+   .+++++++||+.++++.......        ............     
T Consensus       151 ---------~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  216 (258)
T PRK12429        151 ---------AAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLP-----  216 (258)
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhc-----
Confidence                     56888888888777766554   48999999999999876432100        000001111110     


Q ss_pred             CCcccCcccHHHHHHHHHHhhcCCC--CCce-EEecC
Q 021819          222 EYHWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (307)
Q Consensus       222 ~~~~~~~i~~~dva~~~~~~~~~~~--~~g~-~~~~~  255 (307)
                      ....+.+++++|+|+++++++....  ..|. |++.+
T Consensus       217 ~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~  253 (258)
T PRK12429        217 LVPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDG  253 (258)
T ss_pred             cCCccccCCHHHHHHHHHHHcCccccCccCCeEEeCC
Confidence            1134679999999999999987643  3355 44443

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.93  E-value=2.5e-24  Score=181.48  Aligned_cols=228  Identities=20%  Similarity=0.226  Sum_probs=157.2

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCC-hhHHHHHh-cCccEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD-SGAVSRAV-EGCKGV   84 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d-~~~~~~~~-~~~d~v   84 (307)
                      .++|+|+||||||+||++|+++|+++|+ +|+++.|+.+.......   ... ++.++.+|++| .+.+.+.+ .++|+|
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~---~~~-~~~~~~~Dl~d~~~~l~~~~~~~~d~v   89 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLP---QDP-SLQIVRADVTEGSDKLVEAIGDDSDAV   89 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcc---cCC-ceEEEEeeCCCCHHHHHHHhhcCCCEE
Confidence            4578999999999999999999999999 89999987654322111   111 68899999998 46677777 689999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhccc-Ccc
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR-KKW  163 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~-~~~  163 (307)
                      ||+++.....    .....+++|..++.++++++++.++++||++||++. |+....  .+.      .+.|...+ ...
T Consensus        90 i~~~g~~~~~----~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v-~g~~~~--~~~------~~~~~~~~~~~~  156 (251)
T PLN00141         90 ICATGFRRSF----DPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILV-NGAAMG--QIL------NPAYIFLNLFGL  156 (251)
T ss_pred             EECCCCCcCC----CCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccc-cCCCcc--ccc------CcchhHHHHHHH
Confidence            9998864321    122345789999999999999999999999999754 432110  111      11121111 133


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhc
Q 021819          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE  243 (307)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~  243 (307)
                      |...|..+|++++    +.+++++++||+.++++.....  ..       ...    .......+++.+|+|+++..++.
T Consensus       157 ~~~~k~~~e~~l~----~~gi~~~iirpg~~~~~~~~~~--~~-------~~~----~~~~~~~~i~~~dvA~~~~~~~~  219 (251)
T PLN00141        157 TLVAKLQAEKYIR----KSGINYTIVRPGGLTNDPPTGN--IV-------MEP----EDTLYEGSISRDQVAEVAVEALL  219 (251)
T ss_pred             HHHHHHHHHHHHH----hcCCcEEEEECCCccCCCCCce--EE-------ECC----CCccccCcccHHHHHHHHHHHhc
Confidence            5567888887765    5699999999999998653221  00       000    00122357999999999999998


Q ss_pred             CCCCCc-eEEecC---C-cccHHHHHHHHHH
Q 021819          244 SPAASG-RYLCTN---G-IYQFGDFAERVSK  269 (307)
Q Consensus       244 ~~~~~g-~~~~~~---~-~~~~~~~~~~~~~  269 (307)
                      ++...+ .+.+.+   . ..++.+++..+.+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (251)
T PLN00141        220 CPESSYKVVEIVARADAPKRSYKDLFASIKQ  250 (251)
T ss_pred             ChhhcCcEEEEecCCCCCchhHHHHHHHhhc
Confidence            877544 443332   2 3788888887764

>PRK12320 hypothetical protein; Provisional

Probab=99.93  E-value=2.8e-24  Score=200.00  Aligned_cols=202  Identities=17%  Similarity=0.164  Sum_probs=151.0

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEecc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a~   89 (307)
                      |+|+||||+||||++|++.|+++|+ +|++++|.+....         ..+++++.+|++|+. +.+++.++|+|||+|+
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~-~Vi~ldr~~~~~~---------~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa   69 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGH-TVSGIAQHPHDAL---------DPRVDYVCASLRNPV-LQELAGEADAVIHLAP   69 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC-EEEEEeCChhhcc---------cCCceEEEccCCCHH-HHHHhcCCCEEEEcCc
Confidence            3799999999999999999999999 9999998643211         016789999999985 7788889999999998


Q ss_pred             CCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHH
Q 021819           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (307)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (307)
                      ....    .    ...+|+.++.|++++|++.|+ ++||+||..   +.+.                      .|.    
T Consensus        70 ~~~~----~----~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~~---G~~~----------------------~~~----  111 (699)
T PRK12320         70 VDTS----A----PGGVGITGLAHVANAAARAGA-RLLFVSQAA---GRPE----------------------LYR----  111 (699)
T ss_pred             cCcc----c----hhhHHHHHHHHHHHHHHHcCC-eEEEEECCC---CCCc----------------------ccc----
Confidence            6321    1    225899999999999999997 799999742   2111                      122    


Q ss_pred             HHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC-CcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCCCCC
Q 021819          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY-LNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAAS  248 (307)
Q Consensus       170 ~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~~~  248 (307)
                      .+|.++.    .++++++++|++++||+..... ...+..++.....+.       ...++|++|++++++.+++.+. .
T Consensus       112 ~aE~ll~----~~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~-------pI~vIyVdDvv~alv~al~~~~-~  179 (699)
T PRK12320        112 QAETLVS----TGWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSAR-------PIRVLHLDDLVRFLVLALNTDR-N  179 (699)
T ss_pred             HHHHHHH----hcCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCC-------ceEEEEHHHHHHHHHHHHhCCC-C
Confidence            3566654    4579999999999999965432 223444444333333       3345899999999999998643 4


Q ss_pred             ceEEec-CCcccHHHHHHHHHHhCC
Q 021819          249 GRYLCT-NGIYQFGDFAERVSKLFP  272 (307)
Q Consensus       249 g~~~~~-~~~~~~~~~~~~~~~~~~  272 (307)
                      |.||++ ++.+|+.|+.+.+...-|
T Consensus       180 GiyNIG~~~~~Si~el~~~i~~~~p  204 (699)
T PRK12320        180 GVVDLATPDTTNVVTAWRLLRSVDP  204 (699)
T ss_pred             CEEEEeCCCeeEHHHHHHHHHHhCC
Confidence            688765 577999999999987754

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.9e-24  Score=184.61  Aligned_cols=221  Identities=15%  Similarity=0.133  Sum_probs=154.3

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      .+|+++||||+|+||+++++.|+++|+ +|++..|+....+.... +..... ++.++.+|++|++++.++++       
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGG-EAVAFPLDVTDPDSVKSFVAQAEEALG   86 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            457999999999999999999999999 89888886543322211 111111 67888999999999887775       


Q ss_pred             CccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                      .+|+|||+||......    ..+.+...+++|+.++.++++++.    +.+.++||++||.....+.+..          
T Consensus        87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~----------  156 (274)
T PRK07775         87 EIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHM----------  156 (274)
T ss_pred             CCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCc----------
Confidence            5799999999754322    123446778999999999998874    3445689999996654332221          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCC-CcchHHHHHHHHcCCCCCCCCcccC
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPY-LNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                                ..|+.+|.+.|.+++.++++.   |++++++|||.+.++..... ......+........    ......
T Consensus       157 ----------~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~----~~~~~~  222 (274)
T PRK07775        157 ----------GAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWG----QARHDY  222 (274)
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhc----cccccc
Confidence                      469999999999998887654   89999999998876642211 111112222111100    112456


Q ss_pred             cccHHHHHHHHHHhhcCCCCCceEEec
Q 021819          228 AVPVKDVAKAQVLLFESPAASGRYLCT  254 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~~~~g~~~~~  254 (307)
                      +++++|+|++++++++.+.....|++.
T Consensus       223 ~~~~~dva~a~~~~~~~~~~~~~~~~~  249 (274)
T PRK07775        223 FLRASDLARAITFVAETPRGAHVVNME  249 (274)
T ss_pred             ccCHHHHHHHHHHHhcCCCCCCeeEEe
Confidence            899999999999999876544455543

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.3e-24  Score=182.65  Aligned_cols=225  Identities=23%  Similarity=0.238  Sum_probs=162.6

Q ss_pred             CccccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-
Q 021819            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (307)
Q Consensus         1 m~~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-   79 (307)
                      |+.++..++++++||||+|+||+++++.|+++|+ +|++++|+.++.+.+....     +..++.+|++|.+++.++++ 
T Consensus         1 ~~~~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~   74 (245)
T PRK07060          1 MNMAFDFSGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGET-----GCEPLRLDVGDDAAIRAALAA   74 (245)
T ss_pred             CCcccccCCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh-----CCeEEEecCCCHHHHHHHHHH
Confidence            6766666778999999999999999999999999 8999999765443332211     45678899999998888876 


Q ss_pred             --CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc----C-CcEEEEecCcceeccCCCCCCccccc
Q 021819           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                        ++|+|||+||.....    ...+++.+.+.+|+.++.++++++.+.    + .++||++||..++++.+..       
T Consensus        75 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-------  147 (245)
T PRK07060         75 AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDH-------  147 (245)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCC-------
Confidence              489999999975432    122345777889999999999988653    2 3689999997765543332       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                                   ..|+.+|...+.+++.++++   .+++++++||+.++++......... .....+....      ..
T Consensus       148 -------------~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~-~~~~~~~~~~------~~  207 (245)
T PRK07060        148 -------------LAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDP-QKSGPMLAAI------PL  207 (245)
T ss_pred             -------------cHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCH-HHHHHHHhcC------CC
Confidence                         56999999999999888765   4899999999999998643221111 1111111111      23


Q ss_pred             cCcccHHHHHHHHHHhhcCCC--CCceEEecCCcc
Q 021819          226 LGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIY  258 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~~--~~g~~~~~~~~~  258 (307)
                      ..+++++|+++++++++..+.  ..|.++..++++
T Consensus       208 ~~~~~~~d~a~~~~~l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK07060        208 GRFAEVDDVAAPILFLLSDAASMVSGVSLPVDGGY  242 (245)
T ss_pred             CCCCCHHHHHHHHHHHcCcccCCccCcEEeECCCc
Confidence            558999999999999997653  236554434443

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=1.3e-24  Score=182.78  Aligned_cols=217  Identities=19%  Similarity=0.189  Sum_probs=155.2

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC-ccccc-CCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ++|+|+||||||+||++|+++|+++|+ +|++..|+.... +.+.. ...... ++.++.+|+.|++++.++++      
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAGA-DVVVHYRSDEEAAEELVEAVEALGR-RAQAVQADVTDKAALEAAVAAAVERF   82 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECCcCCHHHHHHHHHHHHHHc
Confidence            467999999999999999999999999 777766654321 11111 111111 68899999999998887765      


Q ss_pred             -CccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 -GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                       ++|+|||+||......    ..+.+...+++|+.++.++++.+    ++.+.+++|++||..+.++....         
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~---------  153 (249)
T PRK12825         83 GRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGR---------  153 (249)
T ss_pred             CCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCc---------
Confidence             5799999999654322    23345788999999999999987    45677899999997765443221         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                                 ..|+.+|...+.+++.++++   .+++++++||+.++|+.......  ......   ...    .....
T Consensus       154 -----------~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~--~~~~~~---~~~----~~~~~  213 (249)
T PRK12825        154 -----------SNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIE--EAREAK---DAE----TPLGR  213 (249)
T ss_pred             -----------hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccc--hhHHhh---hcc----CCCCC
Confidence                       46999999999888877665   58999999999999987544311  111111   001    12334


Q ss_pred             cccHHHHHHHHHHhhcCCC--CCce-EEecC
Q 021819          228 AVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~~--~~g~-~~~~~  255 (307)
                      +++++|+++++.+++....  ..|. |++.+
T Consensus       214 ~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~  244 (249)
T PRK12825        214 SGTPEDIARAVAFLCSDASDYITGQVIEVTG  244 (249)
T ss_pred             CcCHHHHHHHHHHHhCccccCcCCCEEEeCC
Confidence            8999999999999997653  3354 55544

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.93  E-value=1.2e-24  Score=184.05  Aligned_cols=222  Identities=16%  Similarity=0.122  Sum_probs=158.8

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      ||++++++++||||+|+||+++++.|+++|+ +|++++|+....+.+.....   .++.++.+|++|++++.++++    
T Consensus         1 ~~~l~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   76 (257)
T PRK07067          1 MMRLQGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIG---PAAIAVSLDVTRQDSIDRIVAAAVE   76 (257)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhC---CceEEEEccCCCHHHHHHHHHHHHH
Confidence            4456678999999999999999999999999 89999987654433322111   157889999999998887775    


Q ss_pred             ---CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc----C-CcEEEEecCcceeccCCCCCCcccc
Q 021819           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                         .+|++||+||.....    ...+++.+.+++|+.++.++++++...    + .++||++||....++.+..      
T Consensus        77 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~------  150 (257)
T PRK07067         77 RFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALV------  150 (257)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCC------
Confidence               579999999975431    123456788999999999999998543    1 2589999997654443322      


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcch--------HHHHHHHHcC
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNAS--------CAVLQQLLQG  216 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~--------~~~~~~~~~~  216 (307)
                                    ..|+.+|...+.+.+.++.+   .++++++++||.++|+.........        ......... 
T Consensus       151 --------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-  215 (257)
T PRK07067        151 --------------SHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGE-  215 (257)
T ss_pred             --------------chhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhh-
Confidence                          57999999999998877764   5899999999999997533210000        000011111 


Q ss_pred             CCCCCCCcccCcccHHHHHHHHHHhhcCCC--CCc-eEEecC
Q 021819          217 SKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTN  255 (307)
Q Consensus       217 ~~~~~~~~~~~~i~~~dva~~~~~~~~~~~--~~g-~~~~~~  255 (307)
                           ......+++++|+|+++++++..+.  ..| .+++.+
T Consensus       216 -----~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~g  252 (257)
T PRK07067        216 -----AVPLGRMGVPDDLTGMALFLASADADYIVAQTYNVDG  252 (257)
T ss_pred             -----cCCCCCccCHHHHHHHHHHHhCcccccccCcEEeecC
Confidence                 1135678999999999999887543  234 455544

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.1e-24  Score=182.00  Aligned_cols=224  Identities=21%  Similarity=0.167  Sum_probs=158.0

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +++|+++||||+|+||++|+++|+++|+ +|+++.|+.+............ .++.++++|++|+++++++++       
T Consensus         3 ~~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~i~~~~~   80 (252)
T PRK06138          3 LAGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAG-GRAFARQGDVGSAEAVEALVDFVAARWG   80 (252)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcC-CeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4578999999999999999999999999 8999998765433222111111 168899999999999888775       


Q ss_pred             CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                      ++|+|||++|.....    ...+.+.+.+.+|+.++.++.+.+    ++.+.++||++||..+.++.+..          
T Consensus        81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~----------  150 (252)
T PRK06138         81 RLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGR----------  150 (252)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCc----------
Confidence            679999999975432    122345677999999998777765    45567899999998776554332          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCc--chHHHHHHHHcCCCCCCCCccc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLN--ASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                                ..|+.+|.+.+.+++.++.+.   +++++++||+.++++.......  ..............     ...
T Consensus       151 ----------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~-----~~~  215 (252)
T PRK06138        151 ----------AAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARH-----PMN  215 (252)
T ss_pred             ----------cHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcC-----CCC
Confidence                      579999999999998887654   8999999999998886432100  00111111111110     123


Q ss_pred             CcccHHHHHHHHHHhhcCCCC--CceEEecCCc
Q 021819          227 GAVPVKDVAKAQVLLFESPAA--SGRYLCTNGI  257 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~~~--~g~~~~~~~~  257 (307)
                      .+++++|+++++++++.++..  .|.++..+++
T Consensus       216 ~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g  248 (252)
T PRK06138        216 RFGTAEEVAQAALFLASDESSFATGTTLVVDGG  248 (252)
T ss_pred             CCcCHHHHHHHHHHHcCchhcCccCCEEEECCC
Confidence            478999999999999987653  3665433333

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.93  E-value=1.9e-24  Score=182.54  Aligned_cols=221  Identities=19%  Similarity=0.219  Sum_probs=153.3

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------Cc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~~   81 (307)
                      +|+++||||+|+||++|++.|+++|+ +|++++|+....+.+.........++.++.+|+.|++++.++++       ++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   79 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGL   79 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            46899999999999999999999999 89999997654433322111111168889999999987665553       57


Q ss_pred             cEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCCCc
Q 021819           82 KGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (307)
Q Consensus        82 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~  153 (307)
                      |+|||+++......    ..+...+.+..|+.++..+++++    ++.+.+++|++||..+..+.+..            
T Consensus        80 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~------------  147 (255)
T TIGR01963        80 DILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFK------------  147 (255)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCC------------
Confidence            99999998754321    22234677889999988888887    45667899999997654443221            


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCc--------chHHHHHHHHcCCCCCCC
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN--------ASCAVLQQLLQGSKDTQE  222 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~--------~~~~~~~~~~~~~~~~~~  222 (307)
                              ..|+.+|...+.+.+.++.+   .+++++++||+.++++.......        .....+.....     ..
T Consensus       148 --------~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~  214 (255)
T TIGR01963       148 --------SAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVML-----PG  214 (255)
T ss_pred             --------chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHH-----cc
Confidence                    56999999888888776654   48999999999999885321100        00000000010     12


Q ss_pred             CcccCcccHHHHHHHHHHhhcCCC--CCce-EEecC
Q 021819          223 YHWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (307)
Q Consensus       223 ~~~~~~i~~~dva~~~~~~~~~~~--~~g~-~~~~~  255 (307)
                      ...+++++++|+|+++++++..+.  ..|. |++++
T Consensus       215 ~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~  250 (255)
T TIGR01963       215 QPTKRFVTVDEVAETALFLASDAAAGITGQAIVLDG  250 (255)
T ss_pred             CccccCcCHHHHHHHHHHHcCccccCccceEEEEcC
Confidence            245679999999999999997642  2354 55553

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.93  E-value=4.7e-24  Score=180.50  Aligned_cols=232  Identities=18%  Similarity=0.142  Sum_probs=164.2

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------Cc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~~   81 (307)
                      +++++||||+|+||+++++.|+++|+ +|++++|++...+.+..... . .++..+++|++|.+++.++++       ++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALG-D-ARFVPVACDLTDAASLAAALANAAAERGPV   78 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhc-C-CceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999 89999997655433222111 1 168889999999999887775       47


Q ss_pred             cEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccCCCCc
Q 021819           82 KGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (307)
Q Consensus        82 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~  153 (307)
                      |+|||++|......    ..+.+...+.+|+.++.++++++.    +.+.+++|++||...... .+.            
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~~------------  145 (257)
T PRK07074         79 DVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA-LGH------------  145 (257)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-CCC------------
Confidence            99999999754321    122345667899999999998883    345678999999544211 111            


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCccc
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  230 (307)
                              ..|+.+|.+.+.+++.++++.   ++++++++||.++++...........+........      ...++++
T Consensus       146 --------~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~  211 (257)
T PRK07074        146 --------PAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWY------PLQDFAT  211 (257)
T ss_pred             --------cccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcC------CCCCCCC
Confidence                    369999999999988887654   79999999999988764322111122222222211      2467899


Q ss_pred             HHHHHHHHHHhhcCC--CCCceEE-ecC-CcccHHHHHHHHHHh
Q 021819          231 VKDVAKAQVLLFESP--AASGRYL-CTN-GIYQFGDFAERVSKL  270 (307)
Q Consensus       231 ~~dva~~~~~~~~~~--~~~g~~~-~~~-~~~~~~~~~~~~~~~  270 (307)
                      ++|+++++++++...  ...|.++ +.+ ......|+++.|.+.
T Consensus       212 ~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~  255 (257)
T PRK07074        212 PDDVANAVLFLASPAARAITGVCLPVDGGLTAGNREMARTLTLE  255 (257)
T ss_pred             HHHHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhccc
Confidence            999999999999643  3346654 433 446788998887654

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.1e-24  Score=184.95  Aligned_cols=220  Identities=21%  Similarity=0.179  Sum_probs=156.0

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCC--CCCCceEEEEcccCChhHHHHHhc-------
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG--AGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +++++||||+|+||+++++.|+++|+ +|++++|+.+..+.......  ....++.++.+|++|++++.+ ++       
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~   80 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG   80 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence            56899999999999999999999999 89999987654433322110  001268899999999988765 43       


Q ss_pred             CccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                      .+|+||||||......    ..+.+.+.+++|+.++.++++.+    ++.+.++||++||..+.++.+..          
T Consensus        81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~----------  150 (280)
T PRK06914         81 RIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGL----------  150 (280)
T ss_pred             CeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCC----------
Confidence            4699999998755321    22345677889999999888886    55667899999997665554332          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHH---HhcCCcEEEEecCceeCCCCCCCC----------cchHHHHHHHHcCCC
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFA---EKHGVDVVAIHPATCLGPLMQPYL----------NASCAVLQQLLQGSK  218 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~---~~~~i~~~ivrp~~v~g~~~~~~~----------~~~~~~~~~~~~~~~  218 (307)
                                ..|+.+|...+.+++.++   .+.+++++++|||.++++......          ......+....... 
T Consensus       151 ----------~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  219 (280)
T PRK06914        151 ----------SPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHI-  219 (280)
T ss_pred             ----------chhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHH-
Confidence                      579999999999888776   345999999999999887432110          00111111111100 


Q ss_pred             CCCCCcccCcccHHHHHHHHHHhhcCCCCCceEEec
Q 021819          219 DTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCT  254 (307)
Q Consensus       219 ~~~~~~~~~~i~~~dva~~~~~~~~~~~~~g~~~~~  254 (307)
                         ......+++++|+|++++++++++.....|+++
T Consensus       220 ---~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~  252 (280)
T PRK06914        220 ---NSGSDTFGNPIDVANLIVEIAESKRPKLRYPIG  252 (280)
T ss_pred             ---hhhhhccCCHHHHHHHHHHHHcCCCCCcccccC
Confidence               012345789999999999999987765556665

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.93  E-value=4.1e-24  Score=182.18  Aligned_cols=215  Identities=20%  Similarity=0.188  Sum_probs=153.9

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcC-------c
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG-------C   81 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-------~   81 (307)
                      +++++||||+|+||++++++|+++|+ +|++.+|+.......        .+++++++|++|++++.+++++       +
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~--------~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~   74 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPI--------PGVELLELDVTDDASVQAAVDEVIARAGRI   74 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccc--------CCCeeEEeecCCHHHHHHHHHHHHHhCCCC
Confidence            56899999999999999999999999 899999975443221        1678999999999999888763       6


Q ss_pred             cEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCCCc
Q 021819           82 KGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (307)
Q Consensus        82 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~  153 (307)
                      |+||||||......    ..+++...+++|+.++.++++++    ++.+.++||++||..+..+.+..            
T Consensus        75 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~------------  142 (270)
T PRK06179         75 DVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYM------------  142 (270)
T ss_pred             CEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCc------------
Confidence            99999999765422    23345788999999999999885    55677899999997665443322            


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCc---chHHHHHHHHcCCCCCCCCcccC
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN---ASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                              ..|+.+|...+.+.+.++.+   .|+++++++||.+.++.......   ..... .................
T Consensus       143 --------~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  213 (270)
T PRK06179        143 --------ALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEY-DRERAVVSKAVAKAVKK  213 (270)
T ss_pred             --------cHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhh-HHHHHHHHHHHHhcccc
Confidence                    57999999999998877654   59999999999998876543211   01000 00000000000001223


Q ss_pred             cccHHHHHHHHHHhhcCCCCCceEEe
Q 021819          228 AVPVKDVAKAQVLLFESPAASGRYLC  253 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~~~~g~~~~  253 (307)
                      ...++|+|+.++.++..+...-.|..
T Consensus       214 ~~~~~~va~~~~~~~~~~~~~~~~~~  239 (270)
T PRK06179        214 ADAPEVVADTVVKAALGPWPKMRYTA  239 (270)
T ss_pred             CCCHHHHHHHHHHHHcCCCCCeeEec
Confidence            46889999999999987665445654

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.93  E-value=6.9e-24  Score=179.18  Aligned_cols=226  Identities=16%  Similarity=0.122  Sum_probs=160.3

Q ss_pred             cccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc--
Q 021819            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE--   79 (307)
Q Consensus         3 ~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~--   79 (307)
                      .++.+++|+++||||+|+||++++++|+++|+ +|++.+|+.+..+.... +.... .++..+.+|++|++++.++++  
T Consensus         3 ~~~~l~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~~~~~~   80 (254)
T PRK08085          3 DLFSLAGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEG-IKAHAAPFNVTHKQEVEAAIEHI   80 (254)
T ss_pred             ccccCCCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcC-CeEEEEecCCCCHHHHHHHHHHH
Confidence            34456788999999999999999999999999 89999987654333221 11111 157788999999998887765  


Q ss_pred             -----CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCccc
Q 021819           80 -----GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVF  146 (307)
Q Consensus        80 -----~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~  146 (307)
                           .+|+|||+||....    ....+++.+.+++|+.++.++++++.+    .+.++||++||..+..+.+..     
T Consensus        81 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-----  155 (254)
T PRK08085         81 EKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTI-----  155 (254)
T ss_pred             HHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCC-----
Confidence                 47999999997532    122345678999999999998888754    345789999997654433222     


Q ss_pred             ccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCC
Q 021819          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (307)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (307)
                                     ..|+.+|.+.+.+++.++.+   .|+++++++||.+.++....... ...+........      
T Consensus       156 ---------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~-~~~~~~~~~~~~------  213 (254)
T PRK08085        156 ---------------TPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVE-DEAFTAWLCKRT------  213 (254)
T ss_pred             ---------------cchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhcc-CHHHHHHHHhcC------
Confidence                           57999999999999888765   48999999999999986543211 111212222211      


Q ss_pred             cccCcccHHHHHHHHHHhhcC--CCCCceEEecCCc
Q 021819          224 HWLGAVPVKDVAKAQVLLFES--PAASGRYLCTNGI  257 (307)
Q Consensus       224 ~~~~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~  257 (307)
                      ....+..++|+|.++.+++..  ....|..+..+++
T Consensus       214 p~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgg  249 (254)
T PRK08085        214 PAARWGDPQELIGAAVFLSSKASDFVNGHLLFVDGG  249 (254)
T ss_pred             CCCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence            124577899999998888864  3345665544444

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=5.1e-24  Score=179.56  Aligned_cols=222  Identities=21%  Similarity=0.204  Sum_probs=157.4

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +++++++||||+|+||++++++|+++|+ +|++++|++...+.+........ ++.++++|++|++++.++++       
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGG-RAIAVAADVSDEADVEAAVAAALERFG   80 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            4567999999999999999999999999 89999998755433322111111 68899999999999988775       


Q ss_pred             CccEEEEeccCCCCC-----CCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                      .+|+|||++|.....     ...+.+.+.+.+|+.++.++++.+.+    .+.++||++||..+..+.+..         
T Consensus        81 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~---------  151 (251)
T PRK07231         81 SVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGL---------  151 (251)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCc---------
Confidence            469999999874322     12344578899999998888887753    566899999997765544332         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCc-chHHHHHHHHcCCCCCCCCccc
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN-ASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                                 ..|+.+|...+.+.+.++.+   .++++++++||.+.++....... .............      ...
T Consensus       152 -----------~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~------~~~  214 (251)
T PRK07231        152 -----------GWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATI------PLG  214 (251)
T ss_pred             -----------hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCC------CCC
Confidence                       56999999998888877654   38999999999997765432211 0111111222211      234


Q ss_pred             CcccHHHHHHHHHHhhcCCC--CCceEEecCC
Q 021819          227 GAVPVKDVAKAQVLLFESPA--ASGRYLCTNG  256 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~~--~~g~~~~~~~  256 (307)
                      .+++++|+|+++++++..+.  ..|.++..++
T Consensus       215 ~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~g  246 (251)
T PRK07231        215 RLGTPEDIANAALFLASDEASWITGVTLVVDG  246 (251)
T ss_pred             CCcCHHHHHHHHHHHhCccccCCCCCeEEECC
Confidence            57899999999999997543  3366544333

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.93  E-value=1.2e-23  Score=178.33  Aligned_cols=219  Identities=17%  Similarity=0.068  Sum_probs=150.1

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +++|+++||||+|+||++++++|+++|+ +|++++|+.........+..... ++.++.+|++|.+++.++++       
T Consensus         6 ~~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (260)
T PRK12823          6 FAGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGG-EALALTADLETYAGAQAAMAAAVEAFG   83 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCC-eEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            4578999999999999999999999999 89999886432222122211112 57789999999988777665       


Q ss_pred             CccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                      ++|++|||||....     ....+++...+++|+.++..+++.+    ++.+.++||++||.... +. .          
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-~~-~----------  151 (260)
T PRK12823         84 RIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATR-GI-N----------  151 (260)
T ss_pred             CCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCcccc-CC-C----------
Confidence            57999999985321     2233455778899998887666555    45566799999996542 11 1          


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCC----------CCcchHHHHHHHHcCC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQP----------YLNASCAVLQQLLQGS  217 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~----------~~~~~~~~~~~~~~~~  217 (307)
                                ..+|+.+|.+.+.+.+.++.+.   ++++++++||.|++|....          .......+..+...+.
T Consensus       152 ----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (260)
T PRK12823        152 ----------RVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSS  221 (260)
T ss_pred             ----------CCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccC
Confidence                      1469999999999998887664   8999999999999974210          0011222223332222


Q ss_pred             CCCCCCcccCcccHHHHHHHHHHhhcCCC--CCce-EEecC
Q 021819          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (307)
Q Consensus       218 ~~~~~~~~~~~i~~~dva~~~~~~~~~~~--~~g~-~~~~~  255 (307)
                      +      ...+.+++|+|+++++++....  ..|. +++.+
T Consensus       222 ~------~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~g  256 (260)
T PRK12823        222 L------MKRYGTIDEQVAAILFLASDEASYITGTVLPVGG  256 (260)
T ss_pred             C------cccCCCHHHHHHHHHHHcCcccccccCcEEeecC
Confidence            2      2345689999999999886432  3454 44443

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.93  E-value=3.2e-24  Score=176.88  Aligned_cols=207  Identities=21%  Similarity=0.212  Sum_probs=157.0

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccC-CCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-PGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      .++++++|||||++||.++++.|.++|+ +|+.+.|+.++...++.. .......+.++++|+++++++.++.+      
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            3478999999999999999999999999 999999998877665543 22222267899999999999888774      


Q ss_pred             -CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                       .+|++|||||.....    .+.++..+++++|+.+...|.++.    .+++.++||+++|.++..+.+..         
T Consensus        83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~---------  153 (265)
T COG0300          83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYM---------  153 (265)
T ss_pred             CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcch---------
Confidence             589999999987653    334455899999999887777766    45667899999998886665553         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                                 +.|+.||...-.+-+.++.+   .|++|+.+.||.+.++.....             +..........-
T Consensus       154 -----------avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~-------------~~~~~~~~~~~~  209 (265)
T COG0300         154 -----------AVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAK-------------GSDVYLLSPGEL  209 (265)
T ss_pred             -----------HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccccc-------------ccccccccchhh
Confidence                       56888888777776665544   589999999999988764311             000000012345


Q ss_pred             cccHHHHHHHHHHhhcCCCC
Q 021819          228 AVPVKDVAKAQVLLFESPAA  247 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~~~  247 (307)
                      +++++|+|+..+..+++.+.
T Consensus       210 ~~~~~~va~~~~~~l~~~k~  229 (265)
T COG0300         210 VLSPEDVAEAALKALEKGKR  229 (265)
T ss_pred             ccCHHHHHHHHHHHHhcCCc
Confidence            78999999999999987654

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.92  E-value=1.2e-23  Score=215.73  Aligned_cols=256  Identities=23%  Similarity=0.201  Sum_probs=178.7

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCC----CCeEEEEeCCCCCCcccccCC----------CCCCCceEEEEcccCC----
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNN----YTSINATVFPGSDSSHLFALP----------GAGDANLRVFEADVLD----   70 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g----~~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~i~~D~~d----   70 (307)
                      .++|+|||||||||++|++.|++++    + +|+++.|..........+.          .....++.++.+|+++    
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~-~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNF-KVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCc-EEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            4799999999999999999999887    5 8999999654432221110          0001168899999974    


Q ss_pred             --hhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCC-------
Q 021819           71 --SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW-------  141 (307)
Q Consensus        71 --~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~-------  141 (307)
                        .+.+.++..++|+|||+|+....   ..........|+.|+.+++++|.+.++++|+|+||.+.+......       
T Consensus      1050 l~~~~~~~l~~~~d~iiH~Aa~~~~---~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~ 1126 (1389)
T TIGR03443      1050 LSDEKWSDLTNEVDVIIHNGALVHW---VYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELV 1126 (1389)
T ss_pred             cCHHHHHHHHhcCCEEEECCcEecC---ccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhh
Confidence              45677777899999999998653   234455667899999999999999888999999997654321100       


Q ss_pred             --CCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCc---chHHHHHHHHcC
Q 021819          142 --KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLN---ASCAVLQQLLQG  216 (307)
Q Consensus       142 --~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~---~~~~~~~~~~~~  216 (307)
                        ....+.|+.+..+. .....+.|+.+|+.+|.++..+++ .|++++++||+.|+|+...+...   .+..++.....-
T Consensus      1127 ~~~~~~~~e~~~~~~~-~~~~~~~Y~~sK~~aE~l~~~~~~-~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~ 1204 (1389)
T TIGR03443      1127 QAGGAGIPESDDLMGS-SKGLGTGYGQSKWVAEYIIREAGK-RGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQL 1204 (1389)
T ss_pred             hccCCCCCcccccccc-cccCCCChHHHHHHHHHHHHHHHh-CCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHh
Confidence              01123444332221 112235699999999999988765 49999999999999997655422   233333322222


Q ss_pred             CCCCCCCcccCcccHHHHHHHHHHhhcCCCC--C-ceEEecC-CcccHHHHHHHHHHh
Q 021819          217 SKDTQEYHWLGAVPVKDVAKAQVLLFESPAA--S-GRYLCTN-GIYQFGDFAERVSKL  270 (307)
Q Consensus       217 ~~~~~~~~~~~~i~~~dva~~~~~~~~~~~~--~-g~~~~~~-~~~~~~~~~~~~~~~  270 (307)
                      .........++|++++|++++++.++.++..  . ..|++.+ ..+++.++++.+.+.
T Consensus      1205 ~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~ 1262 (1389)
T TIGR03443      1205 GLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY 1262 (1389)
T ss_pred             CCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh
Confidence            2222234578999999999999999876542  2 2587765 478999999999764

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.92  E-value=5.6e-24  Score=179.25  Aligned_cols=219  Identities=17%  Similarity=0.124  Sum_probs=151.2

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEE-EeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------C
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINA-TVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~   80 (307)
                      +++++||||+|+||++++++|+++|+ +|++ ..|+....+.+.........++.++.+|++|++++.++++       .
T Consensus         4 ~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (250)
T PRK08063          4 GKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR   82 (250)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999999999 6665 4665443322211111111268889999999998888776       4


Q ss_pred             ccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           81 CKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        81 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      +|+|||+||......    ..+.+...+++|+.++.++++++.+    .+.++||++||..+..+.+..           
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-----------  151 (250)
T PRK08063         83 LDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENY-----------  151 (250)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCc-----------
Confidence            799999998754322    1223456788999999999988864    355799999997654332221           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcc
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (307)
                               ..|+.+|.+.+.+.+.++.+   .++++++++|+.+.++....... ............      ....++
T Consensus       152 ---------~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~-~~~~~~~~~~~~------~~~~~~  215 (250)
T PRK08063        152 ---------TTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPN-REELLEDARAKT------PAGRMV  215 (250)
T ss_pred             ---------cHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccC-chHHHHHHhcCC------CCCCCc
Confidence                     56999999999999887655   58999999999998776432211 112222222111      123478


Q ss_pred             cHHHHHHHHHHhhcCCC--CCce-EEecC
Q 021819          230 PVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (307)
Q Consensus       230 ~~~dva~~~~~~~~~~~--~~g~-~~~~~  255 (307)
                      +++|+|+++++++..+.  ..|. +++.+
T Consensus       216 ~~~dva~~~~~~~~~~~~~~~g~~~~~~g  244 (250)
T PRK08063        216 EPEDVANAVLFLCSPEADMIRGQTIIVDG  244 (250)
T ss_pred             CHHHHHHHHHHHcCchhcCccCCEEEECC
Confidence            99999999999987643  2354 44443

>PRK09135 pteridine reductase; Provisional

Probab=99.92  E-value=1.2e-23  Score=177.05  Aligned_cols=220  Identities=19%  Similarity=0.178  Sum_probs=150.1

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC-Ccccc-cCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ++++|+||||+|+||++++++|+++|+ +|++++|+... .+.+. .+.......+.++.+|++|.+++.++++      
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF   83 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            457999999999999999999999999 89999886432 11111 1111111157889999999998888776      


Q ss_pred             -CccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHHHhc---CCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 -GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                       .+|+|||+||......    ..+.+...+++|+.++.++++++.+.   ..+.+++++|..+..+.             
T Consensus        84 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------  150 (249)
T PRK09135         84 GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPL-------------  150 (249)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcCCC-------------
Confidence             4799999999754311    22345788999999999999999642   22467776653321111             


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHhc--CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (307)
                       .+      ...|+.+|..+|.+++.++++.  +++++++||+.++|+......  ..........+.+      ...+.
T Consensus       151 -~~------~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~--~~~~~~~~~~~~~------~~~~~  215 (249)
T PRK09135        151 -KG------YPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSF--DEEARQAILARTP------LKRIG  215 (249)
T ss_pred             -CC------chhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccC--CHHHHHHHHhcCC------cCCCc
Confidence             11      1579999999999999888764  699999999999999864321  1122222222221      12234


Q ss_pred             cHHHHHHHHHHhhcCC-CCCc-eEEecCC
Q 021819          230 PVKDVAKAQVLLFESP-AASG-RYLCTNG  256 (307)
Q Consensus       230 ~~~dva~~~~~~~~~~-~~~g-~~~~~~~  256 (307)
                      +++|+++++++++... ...| .|++.++
T Consensus       216 ~~~d~a~~~~~~~~~~~~~~g~~~~i~~g  244 (249)
T PRK09135        216 TPEDIAEAVRFLLADASFITGQILAVDGG  244 (249)
T ss_pred             CHHHHHHHHHHHcCccccccCcEEEECCC
Confidence            6899999996666432 3345 4776543

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.3e-23  Score=179.67  Aligned_cols=213  Identities=20%  Similarity=0.225  Sum_probs=149.8

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--------C
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--------G   80 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--------~   80 (307)
                      +|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+...      ++.++.+|++|.++++++++        .
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~------~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~   76 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAE------GLEAFQLDYAEPESIAALVAQVLELSGGR   76 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHC------CceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            56899999999999999999999999 899999976655444322      57889999999988877664        4


Q ss_pred             ccEEEEeccCCCCCC----CCChhhhhhhhhHHH----HHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           81 CKGVFHVASPCTLED----PVDPEKELILPAVQG----TLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        81 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      +|+||||||......    ..+.....+++|+.|    +.++++.+++.+.++||++||..+..+.+..           
T Consensus        77 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~-----------  145 (277)
T PRK05993         77 LDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYR-----------  145 (277)
T ss_pred             ccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCcc-----------
Confidence            699999998754322    223456789999999    5566666777777899999997654332221           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHH---hcCCcEEEEecCceeCCCCCCCCcchH------------HH---HHHHH
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASC------------AV---LQQLL  214 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~i~~~ivrp~~v~g~~~~~~~~~~~------------~~---~~~~~  214 (307)
                               ..|+.+|...+.+.+.++.   ..|+++++++||.|.++..........            .+   .....
T Consensus       146 ---------~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (277)
T PRK05993        146 ---------GAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLE  216 (277)
T ss_pred             ---------chHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHH
Confidence                     5799999999999887753   359999999999998775332100000            00   00000


Q ss_pred             cCCCCCCCCcccCcccHHHHHHHHHHhhcCCCCCceEEe
Q 021819          215 QGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLC  253 (307)
Q Consensus       215 ~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~~~g~~~~  253 (307)
                      ..     .......++++++|+.++.+++++.....|..
T Consensus       217 ~~-----~~~~~~~~~~~~va~~i~~a~~~~~~~~~~~~  250 (277)
T PRK05993        217 GG-----GSKSRFKLGPEAVYAVLLHALTAPRPRPHYRV  250 (277)
T ss_pred             hh-----hhccccCCCHHHHHHHHHHHHcCCCCCCeeee
Confidence            00     00111236889999999999987765444544

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.92  E-value=7.2e-24  Score=178.30  Aligned_cols=219  Identities=19%  Similarity=0.127  Sum_probs=154.2

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC-CCCccc-ccCCCCCCCceEEEEcccCChhHHHHHhcC----
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVEG----   80 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~-~~~~~~-~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~----   80 (307)
                      .++++++||||+|+||++++++|+++|+ +|++..++. ...+.. ..+...+. ++.++.+|++|++++.+++++    
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   81 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGA-KVVINYNSSKEAAENLVNELGKEGH-DVYAVQADVSKVEDANRLVEEAVNH   81 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEcCCcHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3468999999999999999999999999 777665532 222222 11111112 688899999999998887764    


Q ss_pred             ---ccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcccccC
Q 021819           81 ---CKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        81 ---~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                         +|+|||+||......    ..+.+++.+++|+.++.++++++..    .+.+++|++||..+..+....        
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--------  153 (247)
T PRK12935         82 FGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQ--------  153 (247)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCC--------
Confidence               799999999754321    2245678899999999999999864    345689999997665443222        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                                  ..|+.+|.+.+.+.+.++.+   .++++++++||.+.++.....   ..........+.      ...
T Consensus       154 ------------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~---~~~~~~~~~~~~------~~~  212 (247)
T PRK12935        154 ------------TNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEV---PEEVRQKIVAKI------PKK  212 (247)
T ss_pred             ------------cchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhc---cHHHHHHHHHhC------CCC
Confidence                        57999999988888777655   389999999999987653321   111112222211      245


Q ss_pred             CcccHHHHHHHHHHhhcCCC-CCc-eEEecCC
Q 021819          227 GAVPVKDVAKAQVLLFESPA-ASG-RYLCTNG  256 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~~-~~g-~~~~~~~  256 (307)
                      .+++++|+++++.++++... ..| .|++.++
T Consensus       213 ~~~~~edva~~~~~~~~~~~~~~g~~~~i~~g  244 (247)
T PRK12935        213 RFGQADEIAKGVVYLCRDGAYITGQQLNINGG  244 (247)
T ss_pred             CCcCHHHHHHHHHHHcCcccCccCCEEEeCCC
Confidence            68999999999999887542 234 4666544

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.92  E-value=4.8e-24  Score=180.54  Aligned_cols=218  Identities=17%  Similarity=0.158  Sum_probs=153.9

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------C
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~   80 (307)
                      ++|+++||||+|+||++++++|+++|+ +|++++|++...+.+.........++.++.+|++|+++++.+++       +
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR   82 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            467999999999999999999999999 89999997654333222111111167899999999998877664       5


Q ss_pred             ccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHHHhc---CCcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           81 CKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        81 ~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      +|+|||+||....     ....+++.+.+++|+.++..+++++.+.   ..++||++||.....+.+..           
T Consensus        83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~-----------  151 (258)
T PRK07890         83 VDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPKY-----------  151 (258)
T ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCCc-----------
Confidence            7999999986432     2233456888999999999999999652   23589999997654433221           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCc--------chHHHHHHHHcCCCCCC
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN--------ASCAVLQQLLQGSKDTQ  221 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~--------~~~~~~~~~~~~~~~~~  221 (307)
                               ..|+.+|...+.+++.++.+   .++++++++||.++|+.......        .............    
T Consensus       152 ---------~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  218 (258)
T PRK07890        152 ---------GAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANS----  218 (258)
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcC----
Confidence                     57999999999999888755   48999999999999986432100        0011111111111    


Q ss_pred             CCcccCcccHHHHHHHHHHhhcCC--CCCceEE
Q 021819          222 EYHWLGAVPVKDVAKAQVLLFESP--AASGRYL  252 (307)
Q Consensus       222 ~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~  252 (307)
                        ....+.+++|+++++++++...  ...|..+
T Consensus       219 --~~~~~~~~~dva~a~~~l~~~~~~~~~G~~i  249 (258)
T PRK07890        219 --DLKRLPTDDEVASAVLFLASDLARAITGQTL  249 (258)
T ss_pred             --CccccCCHHHHHHHHHHHcCHhhhCccCcEE
Confidence              1234678999999998888743  3345543

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.92  E-value=5.2e-24  Score=172.31  Aligned_cols=228  Identities=19%  Similarity=0.150  Sum_probs=176.4

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC-CCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      .++-.+-|.|||||+|+.++.+|.+.|. +|+.-.|.. ..-..++.+...+  ++.+...|+.|+++++++++..++||
T Consensus        59 ~sGiVaTVFGAtGFlGryvvnklak~GS-QviiPyR~d~~~~r~lkvmGdLG--Qvl~~~fd~~DedSIr~vvk~sNVVI  135 (391)
T KOG2865|consen   59 VSGIVATVFGATGFLGRYVVNKLAKMGS-QVIIPYRGDEYDPRHLKVMGDLG--QVLFMKFDLRDEDSIRAVVKHSNVVI  135 (391)
T ss_pred             ccceEEEEecccccccHHHHHHHhhcCC-eEEEeccCCccchhheeeccccc--ceeeeccCCCCHHHHHHHHHhCcEEE
Confidence            4467889999999999999999999999 898888843 3344455443333  68899999999999999999999999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHH
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (307)
                      |+.|..-    +.......++|+.+..+|++.|++.|+.|||++|+..+   +...            +       +-|-
T Consensus       136 NLIGrd~----eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lga---nv~s------------~-------Sr~L  189 (391)
T KOG2865|consen  136 NLIGRDY----ETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGA---NVKS------------P-------SRML  189 (391)
T ss_pred             Eeecccc----ccCCcccccccchHHHHHHHHHHhhChhheeehhhccc---cccC------------h-------HHHH
Confidence            9988632    23345788999999999999999999999999998553   1111            1       3488


Q ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCC-C--C-CcccCcccHHHHHHHHHHh
Q 021819          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-Q--E-YHWLGAVPVKDVAKAQVLL  241 (307)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~-~--~-~~~~~~i~~~dva~~~~~~  241 (307)
                      .+|.++|+.++.    .--..+|+||+.|||..+...    ..+.....+-..+. +  + .....++++.|+|.+|+.+
T Consensus       190 rsK~~gE~aVrd----afPeAtIirPa~iyG~eDrfl----n~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnA  261 (391)
T KOG2865|consen  190 RSKAAGEEAVRD----AFPEATIIRPADIYGTEDRFL----NYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNA  261 (391)
T ss_pred             HhhhhhHHHHHh----hCCcceeechhhhcccchhHH----HHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHh
Confidence            999999999973    346899999999999886543    22222222212222 2  1 2677899999999999999


Q ss_pred             hcCCCCCc-eEEecC-CcccHHHHHHHHHHhC
Q 021819          242 FESPAASG-RYLCTN-GIYQFGDFAERVSKLF  271 (307)
Q Consensus       242 ~~~~~~~g-~~~~~~-~~~~~~~~~~~~~~~~  271 (307)
                      +..+...| +|-.++ ..+.+.|+++.|-+..
T Consensus       262 vkDp~s~Gktye~vGP~~yql~eLvd~my~~~  293 (391)
T KOG2865|consen  262 VKDPDSMGKTYEFVGPDRYQLSELVDIMYDMA  293 (391)
T ss_pred             ccCccccCceeeecCCchhhHHHHHHHHHHHH
Confidence            99998888 487665 5689999999988777

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.92  E-value=1.4e-23  Score=179.60  Aligned_cols=230  Identities=17%  Similarity=0.153  Sum_probs=158.8

Q ss_pred             CccccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc
Q 021819            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE   79 (307)
Q Consensus         1 m~~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~   79 (307)
                      |+++++.++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+.. +..... ++.++++|++|++++.++++
T Consensus         2 ~~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~   79 (278)
T PRK08277          2 MPNLFSLKGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGG-EALAVKADVLDKESLEQARQ   79 (278)
T ss_pred             CCceeccCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHH
Confidence            4445556678999999999999999999999999 89999987544333222 111111 67889999999988877664


Q ss_pred             -------CccEEEEeccCCCCC-------------------CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEe
Q 021819           80 -------GCKGVFHVASPCTLE-------------------DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVT  129 (307)
Q Consensus        80 -------~~d~vi~~a~~~~~~-------------------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~i  129 (307)
                             ++|++|||||.....                   ...+++...+++|+.++..+++++    .+.+.++||++
T Consensus        80 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~i  159 (278)
T PRK08277         80 QILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINI  159 (278)
T ss_pred             HHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence                   689999999964321                   112346788999999998776655    44456789999


Q ss_pred             cCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCC---
Q 021819          130 SSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYL---  203 (307)
Q Consensus       130 SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~---  203 (307)
                      ||..+..+.+..                    ..|+.+|...+.+.+.++.+.   ++++++++||.|.++......   
T Consensus       160 sS~~~~~~~~~~--------------------~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~  219 (278)
T PRK08277        160 SSMNAFTPLTKV--------------------PAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNE  219 (278)
T ss_pred             ccchhcCCCCCC--------------------chhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccc
Confidence            997765433322                    569999999999988887664   899999999999988532210   


Q ss_pred             -cchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcC-C--CCCceEEecCCcc
Q 021819          204 -NASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFES-P--AASGRYLCTNGIY  258 (307)
Q Consensus       204 -~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~-~--~~~g~~~~~~~~~  258 (307)
                       ..............      ....+..++|+|+++++++.. .  ...|..+..++++
T Consensus       220 ~~~~~~~~~~~~~~~------p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~  272 (278)
T PRK08277        220 DGSLTERANKILAHT------PMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGGF  272 (278)
T ss_pred             cccchhHHHHHhccC------CccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCCe
Confidence             00011111111111      123467899999999998765 2  2346655555443

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.92  E-value=9.5e-24  Score=177.83  Aligned_cols=217  Identities=19%  Similarity=0.177  Sum_probs=153.1

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------C
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~   80 (307)
                      ++++++||||+|+||++++++|+++|+ +|++++|+.+..+.+.........++.++++|++|.++++++++       .
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999 89999887654433222111111268899999999998888765       5


Q ss_pred             ccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        81 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      +|+|||++|.....    ...+.+.+.+++|+.++.++++++.    +.+.+++|++||..++.+.+..           
T Consensus        81 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~-----------  149 (250)
T TIGR03206        81 VDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGE-----------  149 (250)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCC-----------
Confidence            79999999864321    1223346789999999999988875    4566899999997765543332           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCC---cchHHHHHHHHcCCCCCCCCccc
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYL---NASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                               ..|+.+|.+.+.+.+.++++.   ++++++++|+.++++......   .....+...+....+      ..
T Consensus       150 ---------~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~  214 (250)
T TIGR03206       150 ---------AVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIP------LG  214 (250)
T ss_pred             ---------chHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCC------cc
Confidence                     469999999888888777664   899999999999988532210   001112222222211      22


Q ss_pred             CcccHHHHHHHHHHhhcCCC--CCceE
Q 021819          227 GAVPVKDVAKAQVLLFESPA--ASGRY  251 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~~--~~g~~  251 (307)
                      .+..++|+|+++.+++..+.  ..|.+
T Consensus       215 ~~~~~~dva~~~~~l~~~~~~~~~g~~  241 (250)
T TIGR03206       215 RLGQPDDLPGAILFFSSDDASFITGQV  241 (250)
T ss_pred             CCcCHHHHHHHHHHHcCcccCCCcCcE
Confidence            35688999999999887543  23543

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.92  E-value=1e-23  Score=169.25  Aligned_cols=183  Identities=30%  Similarity=0.389  Sum_probs=140.3

Q ss_pred             EEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEeccCC
Q 021819           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPC   91 (307)
Q Consensus        12 ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a~~~   91 (307)
                      |+|+||||++|+.|+++|+++|+ +|+++.|++++.+.  .      .+++++.+|+.|++++.++++++|+||++++..
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~------~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~   71 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--S------PGVEIIQGDLFDPDSVKAALKGADAVIHAAGPP   71 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--C------TTEEEEESCTTCHHHHHHHHTTSSEEEECCHST
T ss_pred             eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--c------cccccceeeehhhhhhhhhhhhcchhhhhhhhh
Confidence            79999999999999999999998 99999998776544  1      189999999999999999999999999998763


Q ss_pred             CCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHHHH
Q 021819           92 TLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLA  171 (307)
Q Consensus        92 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~  171 (307)
                      ..             +...+.+++++|++.+++++|++||.+. +.....  ....+.   .+.+     ..|...|..+
T Consensus        72 ~~-------------~~~~~~~~~~a~~~~~~~~~v~~s~~~~-~~~~~~--~~~~~~---~~~~-----~~~~~~~~~~  127 (183)
T PF13460_consen   72 PK-------------DVDAAKNIIEAAKKAGVKRVVYLSSAGV-YRDPPG--LFSDED---KPIF-----PEYARDKREA  127 (183)
T ss_dssp             TT-------------HHHHHHHHHHHHHHTTSSEEEEEEETTG-TTTCTS--EEEGGT---CGGG-----HHHHHHHHHH
T ss_pred             cc-------------cccccccccccccccccccceeeecccc-CCCCCc--cccccc---ccch-----hhhHHHHHHH
Confidence            32             2778899999999999999999998664 332221  111111   1111     3578888888


Q ss_pred             HHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcC
Q 021819          172 EKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFES  244 (307)
Q Consensus       172 e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~  244 (307)
                      |+.++    +.+++++++||+.+||+..... .....            .+....++|+.+|+|++++.++++
T Consensus       128 e~~~~----~~~~~~~ivrp~~~~~~~~~~~-~~~~~------------~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  128 EEALR----ESGLNWTIVRPGWIYGNPSRSY-RLIKE------------GGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             HHHHH----HSTSEEEEEEESEEEBTTSSSE-EEESS------------TSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             HHHHH----hcCCCEEEEECcEeEeCCCcce-eEEec------------cCCCCcCcCCHHHHHHHHHHHhCC
Confidence            88775    5699999999999999874422 11100            122456899999999999998864

...

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.3e-23  Score=177.09  Aligned_cols=219  Identities=17%  Similarity=0.199  Sum_probs=156.5

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc---
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE---   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~---   79 (307)
                      |+..++|+++||||+|+||++++++|+++|+ +|++++|+......+.. +..... ++.++.+|++|.++++++++   
T Consensus         1 ~~~~~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~   78 (250)
T PRK07774          1 MGRFDDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGG-TAIAVQVDVSDPDSAKAMADATV   78 (250)
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHH
Confidence            3445578999999999999999999999999 89999997544332221 111111 56788999999998877665   


Q ss_pred             ----CccEEEEeccCCCC-------CCCCChhhhhhhhhHHHHHHHHHHHHhc----CCcEEEEecCcceeccCCCCCCc
Q 021819           80 ----GCKGVFHVASPCTL-------EDPVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGK  144 (307)
Q Consensus        80 ----~~d~vi~~a~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~iSS~~~~~~~~~~~~~  144 (307)
                          .+|+|||+||....       ....+.+.+.+++|+.++.++++++.+.    +.++||++||..++.+       
T Consensus        79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-------  151 (250)
T PRK07774         79 SAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLY-------  151 (250)
T ss_pred             HHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCC-------
Confidence                57999999997532       1123345678899999999999988643    4579999999665321       


Q ss_pred             ccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC
Q 021819          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ  221 (307)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  221 (307)
                                      .+.|+.+|.+.+.+.+.++++.   ++++++++||.+.++......  ...+......+.+   
T Consensus       152 ----------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~--~~~~~~~~~~~~~---  210 (250)
T PRK07774        152 ----------------SNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVT--PKEFVADMVKGIP---  210 (250)
T ss_pred             ----------------ccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccC--CHHHHHHHHhcCC---
Confidence                            1579999999999999887764   799999999999887654321  1223333333322   


Q ss_pred             CCcccCcccHHHHHHHHHHhhcCCC--CCce-EEecC
Q 021819          222 EYHWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (307)
Q Consensus       222 ~~~~~~~i~~~dva~~~~~~~~~~~--~~g~-~~~~~  255 (307)
                         ...+.+++|++++++.++....  ..|. |++.+
T Consensus       211 ---~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~  244 (250)
T PRK07774        211 ---LSRMGTPEDLVGMCLFLLSDEASWITGQIFNVDG  244 (250)
T ss_pred             ---CCCCcCHHHHHHHHHHHhChhhhCcCCCEEEECC
Confidence               1225689999999999887642  3454 55544

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.3e-23  Score=177.51  Aligned_cols=219  Identities=17%  Similarity=0.153  Sum_probs=150.5

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEE-eCCCCCCcccc-cCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ++++++||||+|+||++++++|+++|+ +|+++ .|+....+... .+... ..++.++++|++|++++.++++      
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~i~~~~~~~~~~~   82 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGA-LVAIHYGRNKQAADETIREIESN-GGKAFLIEADLNSIDGVKKLVEQLKNEL   82 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhc-CCcEEEEEcCcCCHHHHHHHHHHHHHHh
Confidence            457999999999999999999999999 77664 55543322211 11111 1167889999999999887765      


Q ss_pred             -------CccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCccc
Q 021819           80 -------GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVF  146 (307)
Q Consensus        80 -------~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~  146 (307)
                             ++|+|||+||......    ..+.+...+++|+.++.++++++.+.  ..+++|++||..+..+.++.     
T Consensus        83 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~~~-----  157 (254)
T PRK12746         83 QIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGS-----  157 (254)
T ss_pred             ccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCCCC-----
Confidence                   4899999999754322    12234677889999999999998763  33589999997654433332     


Q ss_pred             ccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCC
Q 021819          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (307)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (307)
                                     ..|+.+|.+.+.+.+.++++   .++++++++|+.++++....... -..+........      
T Consensus       158 ---------------~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~-~~~~~~~~~~~~------  215 (254)
T PRK12746        158 ---------------IAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLD-DPEIRNFATNSS------  215 (254)
T ss_pred             ---------------cchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhcc-ChhHHHHHHhcC------
Confidence                           57999999999988877664   58999999999998876432110 011111111111      


Q ss_pred             cccCcccHHHHHHHHHHhhcCCCC--Cc-eEEecC
Q 021819          224 HWLGAVPVKDVAKAQVLLFESPAA--SG-RYLCTN  255 (307)
Q Consensus       224 ~~~~~i~~~dva~~~~~~~~~~~~--~g-~~~~~~  255 (307)
                      ....+++++|+|+++.+++..+..  .| .|++.+
T Consensus       216 ~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~  250 (254)
T PRK12746        216 VFGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSG  250 (254)
T ss_pred             CcCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCC
Confidence            123567999999999888875432  34 465543

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.4e-23  Score=176.73  Aligned_cols=209  Identities=20%  Similarity=0.132  Sum_probs=149.7

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +++|+++||||+|+||++++++|+++|+ +|++++|+.+.........   ..++.++++|++|.+++.++++       
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAEL---GESALVIRADAGDVAAQKALAQALAEAFG   79 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            3467999999999999999999999999 8999988754332222111   1157789999999887766554       


Q ss_pred             CccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcccccCCCCc
Q 021819           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~  153 (307)
                      ++|+|||+||......    ..+.++..+++|+.++.++++++...  ..+++|++||..+.++.+..            
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~~------------  147 (249)
T PRK06500         80 RLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPNS------------  147 (249)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCCc------------
Confidence            5799999998754321    23456789999999999999999752  23578888887766554332            


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCC---CcchHHHHHHHHcCCCCCCCCcccC
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                              ..|+.+|...|.+++.++.+.   +++++++||+.++++.....   ......+.+......+      ...
T Consensus       148 --------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~------~~~  213 (249)
T PRK06500        148 --------SVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVP------LGR  213 (249)
T ss_pred             --------cHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCC------CCC
Confidence                    579999999999998877653   89999999999999853211   1111222222322222      123


Q ss_pred             cccHHHHHHHHHHhhcCC
Q 021819          228 AVPVKDVAKAQVLLFESP  245 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~  245 (307)
                      +.+++|+|+++.+++..+
T Consensus       214 ~~~~~~va~~~~~l~~~~  231 (249)
T PRK06500        214 FGTPEEIAKAVLYLASDE  231 (249)
T ss_pred             CcCHHHHHHHHHHHcCcc
Confidence            568999999999988653

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.4e-23  Score=178.05  Aligned_cols=223  Identities=19%  Similarity=0.202  Sum_probs=156.4

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      .++|+++||||+|+||+++++.|+++|+ +|++++|+....+.+....  . .++.++++|++|++++.++++       
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   79 (261)
T PRK08265          4 LAGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASL--G-ERARFIATDITDDAAIERAVATVVARFG   79 (261)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh--C-CeeEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            4578999999999999999999999999 9999999765433332221  1 168899999999998887775       


Q ss_pred             CccEEEEeccCCCC---CCCCChhhhhhhhhHHHHHHHHHHHHh---cCCcEEEEecCcceeccCCCCCCcccccCCCCc
Q 021819           80 GCKGVFHVASPCTL---EDPVDPEKELILPAVQGTLNVLEAAKR---FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (307)
Q Consensus        80 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~  153 (307)
                      .+|++|||||....   ....+.+.+.+++|+.++.++++++..   .+.+++|++||..+..+.+..            
T Consensus        80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~------------  147 (261)
T PRK08265         80 RVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTGR------------  147 (261)
T ss_pred             CCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCC------------
Confidence            47999999997532   223345678899999999999988754   334689999997776554432            


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCccc
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  230 (307)
                              ..|+.+|...+.+.+.++.+   .++++++|+||.+.++................... .  .  ....+..
T Consensus       148 --------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~-~--~--p~~r~~~  214 (261)
T PRK08265        148 --------WLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAP-F--H--LLGRVGD  214 (261)
T ss_pred             --------chhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcc-c--C--CCCCccC
Confidence                    56999999999888877765   48999999999988775322111000111111110 0  0  1223568


Q ss_pred             HHHHHHHHHHhhcCCC--CCceEEecCCcc
Q 021819          231 VKDVAKAQVLLFESPA--ASGRYLCTNGIY  258 (307)
Q Consensus       231 ~~dva~~~~~~~~~~~--~~g~~~~~~~~~  258 (307)
                      ++|+|+++++++....  ..|..+..+++.
T Consensus       215 p~dva~~~~~l~s~~~~~~tG~~i~vdgg~  244 (261)
T PRK08265        215 PEEVAQVVAFLCSDAASFVTGADYAVDGGY  244 (261)
T ss_pred             HHHHHHHHHHHcCccccCccCcEEEECCCe
Confidence            9999999999987532  346544444443

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.8e-23  Score=176.72  Aligned_cols=222  Identities=20%  Similarity=0.136  Sum_probs=158.9

Q ss_pred             cccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         5 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      ++.++|+++||||+|+||+++++.|+++|+ +|+++.|+............   ..+..+++|++|++++.++++     
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~   86 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLG---GNAKGLVCDVSDSQSVEAAVAAVISA   86 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhC---CceEEEEecCCCHHHHHHHHHHHHHH
Confidence            345678999999999999999999999999 89999987543222222211   156789999999998887765     


Q ss_pred             --CccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 --GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                        ++|+|||+||......    ..+.+.+.+++|+.++.++++++..    .+.++||++||..+.++.+..        
T Consensus        87 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--------  158 (255)
T PRK06841         87 FGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERH--------  158 (255)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCC--------
Confidence              5799999999754321    2234567899999999999998854    356799999997765554332        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                                  ..|+.+|.+.+.+.+.++++   .+++++.++||.|.++.......  ...........      ...
T Consensus       159 ------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~------~~~  218 (255)
T PRK06841        159 ------------VAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWA--GEKGERAKKLI------PAG  218 (255)
T ss_pred             ------------chHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccc--hhHHHHHHhcC------CCC
Confidence                        56999999998888877765   48999999999998875432111  01111122211      134


Q ss_pred             CcccHHHHHHHHHHhhcCCC--CCceEEecCCcc
Q 021819          227 GAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIY  258 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~~--~~g~~~~~~~~~  258 (307)
                      .+.+++|+|+++++++..+.  ..|..+..+++.
T Consensus       219 ~~~~~~~va~~~~~l~~~~~~~~~G~~i~~dgg~  252 (255)
T PRK06841        219 RFAYPEEIAAAALFLASDAAAMITGENLVIDGGY  252 (255)
T ss_pred             CCcCHHHHHHHHHHHcCccccCccCCEEEECCCc
Confidence            57899999999999987643  347665545443

>PRK06194 hypothetical protein; Provisional

Probab=99.92  E-value=1.1e-23  Score=181.04  Aligned_cols=170  Identities=15%  Similarity=0.111  Sum_probs=128.8

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      .+++++|||||+|+||+++++.|+++|+ +|++++|+....+... .+.... .++.++.+|++|.+++.++++      
T Consensus         4 ~~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~~~~~   81 (287)
T PRK06194          4 FAGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQG-AEVLGVRTDVSDAAQVEALADAALERF   81 (287)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcC-CeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3468999999999999999999999999 8999998654433222 111111 167889999999999988876      


Q ss_pred             -CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCC------cEEEEecCcceeccCCCCCCc
Q 021819           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGV------RRVVVTSSISAIVPNPGWKGK  144 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~------~~~v~iSS~~~~~~~~~~~~~  144 (307)
                       .+|+||||||.....    ...+.+...+++|+.++.++++++    .+.+.      +++|++||..+.++.+..   
T Consensus        82 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~---  158 (287)
T PRK06194         82 GAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAM---  158 (287)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCC---
Confidence             479999999986542    222445678999999999988874    44433      589999997775543332   


Q ss_pred             ccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc-----CCcEEEEecCceeCCC
Q 021819          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH-----GVDVVAIHPATCLGPL  198 (307)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-----~i~~~ivrp~~v~g~~  198 (307)
                                       +.|+.+|.+.+.+++.++.+.     +++++++.|+.|.++.
T Consensus       159 -----------------~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~  200 (287)
T PRK06194        159 -----------------GIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGI  200 (287)
T ss_pred             -----------------cchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcc
Confidence                             579999999999998877653     4788899999886654

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.4e-23  Score=177.30  Aligned_cols=225  Identities=18%  Similarity=0.180  Sum_probs=155.3

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc---
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE---   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~---   79 (307)
                      |++.++|+++||||+|+||+++++.|+++|+ +|++++|++++.+.+.. +..... ++.++.+|++|+++++++++   
T Consensus         1 ~~~~~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~   78 (254)
T PRK07478          1 MMRLNGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGG-EAVALAGDVRDEAYAKALVALAV   78 (254)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHH
Confidence            3445678999999999999999999999999 89999997655443322 111112 67889999999998887775   


Q ss_pred             ----CccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceec-cCCCCCCcc
Q 021819           80 ----GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIV-PNPGWKGKV  145 (307)
Q Consensus        80 ----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~-~~~~~~~~~  145 (307)
                          .+|++||+||....     ....+++...+++|+.++..+.+++    ++.+.+++|++||..+.. +.+.     
T Consensus        79 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~-----  153 (254)
T PRK07478         79 ERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPG-----  153 (254)
T ss_pred             HhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCC-----
Confidence                57999999997532     1223456788999998888776654    445567899999965531 2222     


Q ss_pred             cccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCC
Q 021819          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (307)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (307)
                                     ...|+.+|.+.+.+.+.++.+.   ++++++++||.+.++....... ..... .......    
T Consensus       154 ---------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~-~~~~~~~----  212 (254)
T PRK07478        154 ---------------MAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGD-TPEAL-AFVAGLH----  212 (254)
T ss_pred             ---------------cchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccC-CHHHH-HHHHhcC----
Confidence                           1579999999999998887664   7999999999998874332211 11111 1111110    


Q ss_pred             CcccCcccHHHHHHHHHHhhcCCC--CCceEEecCCc
Q 021819          223 YHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGI  257 (307)
Q Consensus       223 ~~~~~~i~~~dva~~~~~~~~~~~--~~g~~~~~~~~  257 (307)
                       ....+..++|+|+++++++..+.  ..|..+..+++
T Consensus       213 -~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg  248 (254)
T PRK07478        213 -ALKRMAQPEEIAQAALFLASDAASFVTGTALLVDGG  248 (254)
T ss_pred             -CCCCCcCHHHHHHHHHHHcCchhcCCCCCeEEeCCc
Confidence             12345789999999999886543  34654444443

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.92  E-value=9.6e-24  Score=179.24  Aligned_cols=229  Identities=21%  Similarity=0.156  Sum_probs=157.7

Q ss_pred             CccccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCCCCCceEEEEcccCChhHHHHHhc
Q 021819            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE   79 (307)
Q Consensus         1 m~~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~   79 (307)
                      |+.|+.+++++++||||+|+||++++++|+++|+ +|++++|+.+...... .+..... ++.++.+|++|++++.++++
T Consensus         1 ~~~~~~~~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~i~~~~~   78 (264)
T PRK07576          1 MTTMFDFAGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGP-EGLGVSADVRDYAAVEAAFA   78 (264)
T ss_pred             CCccccCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCC-ceEEEECCCCCHHHHHHHHH
Confidence            6778778889999999999999999999999999 8999998765433221 1111111 56788999999998887765


Q ss_pred             -------CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHhc---CCcEEEEecCcceeccCCCCCCcc
Q 021819           80 -------GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKV  145 (307)
Q Consensus        80 -------~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~iSS~~~~~~~~~~~~~~  145 (307)
                             .+|++||+||....    ....+.+.+.+++|+.++.++++++...   ..++||++||..+..+.+..    
T Consensus        79 ~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~~~----  154 (264)
T PRK07576         79 QIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPMQ----  154 (264)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCCCc----
Confidence                   46999999985432    1223345678899999999999988542   22689999997654333322    


Q ss_pred             cccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCC-CCCCCcchHHHHHHHHcCCCCCC
Q 021819          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPL-MQPYLNASCAVLQQLLQGSKDTQ  221 (307)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~-~~~~~~~~~~~~~~~~~~~~~~~  221 (307)
                                      ..|+.+|...+.+++.++.+   .++++++++|+.+.+.. ...... ............    
T Consensus       155 ----------------~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~-~~~~~~~~~~~~----  213 (264)
T PRK07576        155 ----------------AHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAP-SPELQAAVAQSV----  213 (264)
T ss_pred             ----------------cHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhccc-CHHHHHHHHhcC----
Confidence                            56999999999998887655   47999999999887532 111000 001111111111    


Q ss_pred             CCcccCcccHHHHHHHHHHhhcCCC--CCceEEecCCcc
Q 021819          222 EYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIY  258 (307)
Q Consensus       222 ~~~~~~~i~~~dva~~~~~~~~~~~--~~g~~~~~~~~~  258 (307)
                        ....+..++|+|+++++++..+.  ..|.++..+++.
T Consensus       214 --~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~~gg~  250 (264)
T PRK07576        214 --PLKRNGTKQDIANAALFLASDMASYITGVVLPVDGGW  250 (264)
T ss_pred             --CCCCCCCHHHHHHHHHHHcChhhcCccCCEEEECCCc
Confidence              12346789999999999997532  356655444433

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.92  E-value=8.1e-24  Score=178.11  Aligned_cols=223  Identities=19%  Similarity=0.147  Sum_probs=153.4

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC-Ccccc-cCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ++++++||||+||||+++++.|+++|+ +|+++.|+... .+.+. .+..... ++.++++|++|++++.++++      
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGG-RASAVGADLTDEESVAALMDTAREEF   82 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            457999999999999999999999999 89888886432 22111 1111111 57889999999999887765      


Q ss_pred             -CccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcccccCCCCchhh
Q 021819           80 -GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEY  156 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~  156 (307)
                       ++|+|||+|+....  ....+...+++|+.++.++++++.+.  ..+++|++||..+.+...       .+..   +.+
T Consensus        83 ~~~d~vi~~ag~~~~--~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~-------~~~~---~~~  150 (248)
T PRK07806         83 GGLDALVLNASGGME--SGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT-------VKTM---PEY  150 (248)
T ss_pred             CCCcEEEECCCCCCC--CCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc-------ccCC---ccc
Confidence             58999999986432  12235678899999999999999864  235899999854422110       0110   111


Q ss_pred             hcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCc-chHHHHHHHHcCCCCCCCCcccCcccHH
Q 021819          157 CKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN-ASCAVLQQLLQGSKDTQEYHWLGAVPVK  232 (307)
Q Consensus       157 ~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~  232 (307)
                           ..|+.+|...|.+++.++.+   .++++++++|+.+.++....... ........    ..    .....+++++
T Consensus       151 -----~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~----~~----~~~~~~~~~~  217 (248)
T PRK07806        151 -----EPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEA----RR----EAAGKLYTVS  217 (248)
T ss_pred             -----cHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHHH----HH----hhhcccCCHH
Confidence                 57999999999999888654   58999999999887764221100 00011000    00    0124689999


Q ss_pred             HHHHHHHHhhcCCCCCce-EEecCCc
Q 021819          233 DVAKAQVLLFESPAASGR-YLCTNGI  257 (307)
Q Consensus       233 dva~~~~~~~~~~~~~g~-~~~~~~~  257 (307)
                      |+|++++++++++...|. |++++..
T Consensus       218 dva~~~~~l~~~~~~~g~~~~i~~~~  243 (248)
T PRK07806        218 EFAAEVARAVTAPVPSGHIEYVGGAD  243 (248)
T ss_pred             HHHHHHHHHhhccccCccEEEecCcc
Confidence            999999999997766675 6666544

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.92  E-value=2.4e-23  Score=175.26  Aligned_cols=222  Identities=18%  Similarity=0.125  Sum_probs=156.6

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +++|+++||||+|+||++++++|+++|+ +|++++|+... .....+..... ++..+++|+++.+++.++++       
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~-~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (248)
T TIGR01832         3 LEGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPS-ETQQQVEALGR-RFLSLTADLSDIEAIKALVDSAVEEFG   79 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHH-HHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4578999999999999999999999999 89999886421 11111111111 68899999999998886664       


Q ss_pred             CccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHHHh----cC-CcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                      ++|++||+||......    ..+.+++.+++|+.++.++++++.+    .+ .+++|++||..++.+.+..         
T Consensus        80 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~---------  150 (248)
T TIGR01832        80 HIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRV---------  150 (248)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCC---------
Confidence            5899999999764321    2235678899999999999998753    33 4689999997654332221         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                                 ..|+.+|.+.+.+.+.++++.   ++++++++||.|.++........ ...........      ....
T Consensus       151 -----------~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~------~~~~  212 (248)
T TIGR01832       151 -----------PSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRAD-EDRNAAILERI------PAGR  212 (248)
T ss_pred             -----------chhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccC-hHHHHHHHhcC------CCCC
Confidence                       469999999999998888774   89999999999988864321110 11111111111      1346


Q ss_pred             cccHHHHHHHHHHhhcCCC--CCceEEecCCcc
Q 021819          228 AVPVKDVAKAQVLLFESPA--ASGRYLCTNGIY  258 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~~--~~g~~~~~~~~~  258 (307)
                      +++++|+|+++++++....  ..|.++..++++
T Consensus       213 ~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~  245 (248)
T TIGR01832       213 WGTPDDIGGPAVFLASSASDYVNGYTLAVDGGW  245 (248)
T ss_pred             CcCHHHHHHHHHHHcCccccCcCCcEEEeCCCE
Confidence            8999999999999986533  347666555443

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3e-23  Score=177.40  Aligned_cols=235  Identities=24%  Similarity=0.213  Sum_probs=162.9

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCC-CCCceEEEEcccCChhHHHHHhc------
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGA-GDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~-~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+... .+... ...++.++++|++|++++.++++      
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH   84 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999999 8999998754432221 11100 01167888999999998888776      


Q ss_pred             -CccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 -GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                       .+|++||+||....     ....+.+...+++|+.++.++++++.+    .+.++||++||.....+.+.         
T Consensus        85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~---------  155 (276)
T PRK05875         85 GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRW---------  155 (276)
T ss_pred             CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCC---------
Confidence             67999999986432     112234578889999999999987754    34468999999665322222         


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                                 .+.|+.+|...|.+++.++++.   +++++++||+.+.++....... ............      ...
T Consensus       156 -----------~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~------~~~  217 (276)
T PRK05875        156 -----------FGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITE-SPELSADYRACT------PLP  217 (276)
T ss_pred             -----------CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccccc-CHHHHHHHHcCC------CCC
Confidence                       1579999999999999887664   6999999999998876433211 111112222211      123


Q ss_pred             CcccHHHHHHHHHHhhcCCCC--Cce-EEecC-Ccc----cHHHHHHHHHHh
Q 021819          227 GAVPVKDVAKAQVLLFESPAA--SGR-YLCTN-GIY----QFGDFAERVSKL  270 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~~~--~g~-~~~~~-~~~----~~~~~~~~~~~~  270 (307)
                      .+++++|+|+++.+++..+..  .|. +++.+ ..+    ++.|+++.+.+.
T Consensus       218 ~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~  269 (276)
T PRK05875        218 RVGEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGA  269 (276)
T ss_pred             CCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhH
Confidence            467899999999999987553  254 55543 333    666776666544

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.92  E-value=4.7e-23  Score=173.88  Aligned_cols=223  Identities=18%  Similarity=0.121  Sum_probs=159.0

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ++++|+++||||+|+||+++++.|+++|+ +|++++|+....    .    ...++.++++|++|++++.++++      
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~~----~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   73 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPET----V----DGRPAEFHAADVRDPDQVAALVDAIVERH   73 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhhh----h----cCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45678999999999999999999999999 899999875431    0    01167899999999998888775      


Q ss_pred             -CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----c-CCcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----F-GVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                       .+|+||||||.....    ...+.+.+.+++|+.++.++++++.+    . +.++||++||..+..+.+..        
T Consensus        74 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~--------  145 (252)
T PRK07856         74 GRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGT--------  145 (252)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCC--------
Confidence             459999999975431    22334578899999999999998854    2 34689999997765443332        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHhc--CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccC
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                                  ..|+.+|...+.+.+.++.+.  .+++++++||.|.++....... ............+      ...
T Consensus       146 ------------~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~------~~~  206 (252)
T PRK07856        146 ------------AAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYG-DAEGIAAVAATVP------LGR  206 (252)
T ss_pred             ------------chhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhcc-CHHHHHHHhhcCC------CCC
Confidence                        579999999999999887763  3899999999998875332111 0111112222111      234


Q ss_pred             cccHHHHHHHHHHhhcCC--CCCceEEecCCcccHHHHH
Q 021819          228 AVPVKDVAKAQVLLFESP--AASGRYLCTNGIYQFGDFA  264 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~  264 (307)
                      +..++|+|+++++++...  ...|..+..+++....++.
T Consensus       207 ~~~p~~va~~~~~L~~~~~~~i~G~~i~vdgg~~~~~~~  245 (252)
T PRK07856        207 LATPADIAWACLFLASDLASYVSGANLEVHGGGERPAFL  245 (252)
T ss_pred             CcCHHHHHHHHHHHcCcccCCccCCEEEECCCcchHHHH
Confidence            568999999999988653  3457665555554444433

>PRK06128 oxidoreductase; Provisional

Probab=99.92  E-value=2.9e-23  Score=179.50  Aligned_cols=221  Identities=18%  Similarity=0.180  Sum_probs=156.0

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC--cccccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      +++|+++||||+|+||+++++.|+++|+ +|++..++....  +...........++.++++|++|.++++++++     
T Consensus        53 l~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  131 (300)
T PRK06128         53 LQGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE  131 (300)
T ss_pred             cCCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            4568999999999999999999999999 888777643321  11111111111267889999999988887765     


Q ss_pred             --CccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 --GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                        ++|+||||||....     +...+.+.+.+++|+.++.++++++...  ..++||++||..++.+.+..         
T Consensus       132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~---------  202 (300)
T PRK06128        132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTL---------  202 (300)
T ss_pred             hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCCc---------
Confidence              57999999996432     1234467899999999999999999753  23589999997765443332         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                                 ..|+.+|.+.+.+.+.++++   .|+++++++||.|.++..... .........+....      ....
T Consensus       203 -----------~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~-~~~~~~~~~~~~~~------p~~r  264 (300)
T PRK06128        203 -----------LDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSG-GQPPEKIPDFGSET------PMKR  264 (300)
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccC-CCCHHHHHHHhcCC------CCCC
Confidence                       46999999999999888765   489999999999999874321 11122222222222      1345


Q ss_pred             cccHHHHHHHHHHhhcCCC--CCce-EEecC
Q 021819          228 AVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~~--~~g~-~~~~~  255 (307)
                      +.+++|+|.++++++....  ..|. +++.+
T Consensus       265 ~~~p~dva~~~~~l~s~~~~~~~G~~~~v~g  295 (300)
T PRK06128        265 PGQPVEMAPLYVLLASQESSYVTGEVFGVTG  295 (300)
T ss_pred             CcCHHHHHHHHHHHhCccccCccCcEEeeCC
Confidence            6799999999998886533  2354 44443

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.92  E-value=1.1e-23  Score=176.97  Aligned_cols=217  Identities=23%  Similarity=0.183  Sum_probs=154.1

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------Cc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~~   81 (307)
                      +|+|+||||+|+||++|++.|+++|+ +|+++.|++...+...........++.++.+|++|++++.++++       .+
T Consensus         5 ~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (246)
T PRK05653          5 GKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL   83 (246)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            57999999999999999999999999 79999997655432221111111167888999999998877775       35


Q ss_pred             cEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccCCCCc
Q 021819           82 KGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (307)
Q Consensus        82 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~  153 (307)
                      |+|||++|......    ..+.+...++.|+.++.++++++.    +.+.++||++||..+.++....            
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~------------  151 (246)
T PRK05653         84 DILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQ------------  151 (246)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCC------------
Confidence            99999998754421    122346778999999999999884    4567899999997654432221            


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCccc
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  230 (307)
                              ..|+.+|...+.+.+.++++   .+++++++||+.++++.....   ............      ....+++
T Consensus       152 --------~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~---~~~~~~~~~~~~------~~~~~~~  214 (246)
T PRK05653        152 --------TNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGL---PEEVKAEILKEI------PLGRLGQ  214 (246)
T ss_pred             --------cHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhh---hHHHHHHHHhcC------CCCCCcC
Confidence                    56999999998888877654   489999999999999875431   111111111111      1356789


Q ss_pred             HHHHHHHHHHhhcCCC--CCce-EEecC
Q 021819          231 VKDVAKAQVLLFESPA--ASGR-YLCTN  255 (307)
Q Consensus       231 ~~dva~~~~~~~~~~~--~~g~-~~~~~  255 (307)
                      ++|+++++.+++....  ..|. +.+.+
T Consensus       215 ~~dva~~~~~~~~~~~~~~~g~~~~~~g  242 (246)
T PRK05653        215 PEEVANAVAFLASDAASYITGQVIPVNG  242 (246)
T ss_pred             HHHHHHHHHHHcCchhcCccCCEEEeCC
Confidence            9999999999986533  2354 44444

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.92  E-value=1.5e-23  Score=189.76  Aligned_cols=231  Identities=16%  Similarity=0.131  Sum_probs=158.2

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccC-CC-----CC---CCceEEEEcccCChhHHHHH
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-PG-----AG---DANLRVFEADVLDSGAVSRA   77 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-~~-----~~---~~~~~~i~~D~~d~~~~~~~   77 (307)
                      +.+++|+||||+|+||++++++|+++|+ +|++++|+......+... ..     .+   ..++.++.+|++|.+++.++
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a  156 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA  156 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence            4578999999999999999999999999 999999976654332210 00     00   11588999999999999999


Q ss_pred             hcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhh
Q 021819           78 VEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC  157 (307)
Q Consensus        78 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~  157 (307)
                      +.++|+||||+|....  ...++...+.+|+.|+.+++++|++.++++||++||+++...  ..     .+.     .+.
T Consensus       157 LggiDiVVn~AG~~~~--~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~--g~-----p~~-----~~~  222 (576)
T PLN03209        157 LGNASVVICCIGASEK--EVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKV--GF-----PAA-----ILN  222 (576)
T ss_pred             hcCCCEEEEccccccc--cccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhccc--Cc-----ccc-----chh
Confidence            9999999999987532  112345678899999999999999999999999999764211  10     000     011


Q ss_pred             cccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHH
Q 021819          158 KSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKA  237 (307)
Q Consensus       158 ~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~  237 (307)
                       .+ ..|...|..+|+.+.    .+|+++++||||.++++.+.....  ..+ .....+      ......+..+|||++
T Consensus       223 -sk-~~~~~~KraaE~~L~----~sGIrvTIVRPG~L~tp~d~~~~t--~~v-~~~~~d------~~~gr~isreDVA~v  287 (576)
T PLN03209        223 -LF-WGVLCWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKET--HNL-TLSEED------TLFGGQVSNLQVAEL  287 (576)
T ss_pred             -hH-HHHHHHHHHHHHHHH----HcCCCEEEEECCeecCCccccccc--cce-eecccc------ccCCCccCHHHHHHH
Confidence             11 346777888887775    579999999999998875432100  000 000000      012345899999999


Q ss_pred             HHHhhcCCC-CCc-eEEecCCc----ccHHHHHHHH
Q 021819          238 QVLLFESPA-ASG-RYLCTNGI----YQFGDFAERV  267 (307)
Q Consensus       238 ~~~~~~~~~-~~g-~~~~~~~~----~~~~~~~~~~  267 (307)
                      +++++.++. ..+ ++-+.++.    ..+.+++..+
T Consensus       288 VvfLasd~~as~~kvvevi~~~~~p~~~~~~~~~~i  323 (576)
T PLN03209        288 MACMAKNRRLSYCKVVEVIAETTAPLTPMEELLAKI  323 (576)
T ss_pred             HHHHHcCchhccceEEEEEeCCCCCCCCHHHHHHhc
Confidence            999998765 334 35554433    4555555444

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.1e-23  Score=176.81  Aligned_cols=226  Identities=19%  Similarity=0.131  Sum_probs=156.8

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCC--CCCceEEEEcccCChhHHHHHhc----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA--GDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+........  ...++.++++|++|++++.++++    
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEE   82 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            34678999999999999999999999999 899999876544332221111  11167889999999998888775    


Q ss_pred             ---CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 ---GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                         .+|++|||||....    ....+++...+++|+.++.++++++.    +.+.+++|++||..+..+.+..       
T Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  155 (260)
T PRK07063         83 AFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGC-------  155 (260)
T ss_pred             HhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCc-------
Confidence               58999999996532    12234568889999999999888874    3455789999997654433332       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCc---chHHHHHHHHcCCCCCCC
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLN---ASCAVLQQLLQGSKDTQE  222 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~---~~~~~~~~~~~~~~~~~~  222 (307)
                                   ..|+.+|.+.+.+.+.++.+.   |+++++++||.|.++.......   .............     
T Consensus       156 -------------~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-----  217 (260)
T PRK07063        156 -------------FPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQ-----  217 (260)
T ss_pred             -------------hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcC-----
Confidence                         469999999988888877653   8999999999998775322100   0001111111111     


Q ss_pred             CcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCcc
Q 021819          223 YHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIY  258 (307)
Q Consensus       223 ~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~  258 (307)
                       ....+..++|+|.++++++...  ...|..+..+++.
T Consensus       218 -~~~r~~~~~~va~~~~fl~s~~~~~itG~~i~vdgg~  254 (260)
T PRK07063        218 -PMKRIGRPEEVAMTAVFLASDEAPFINATCITIDGGR  254 (260)
T ss_pred             -CCCCCCCHHHHHHHHHHHcCccccccCCcEEEECCCe
Confidence             1233568999999999988653  3456655555443

>PRK05717 oxidoreductase; Validated

Probab=99.92  E-value=2.9e-23  Score=175.50  Aligned_cols=208  Identities=16%  Similarity=0.089  Sum_probs=150.0

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++++|+..+........  .. ++.++++|++|.+++.++++      
T Consensus         7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~--~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (255)
T PRK05717          7 GHNGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKAL--GE-NAWFIAMDVADEAQVAAGVAEVLGQF   82 (255)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHc--CC-ceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            45678999999999999999999999999 8988888654333222111  11 67889999999988766554      


Q ss_pred             -CccEEEEeccCCCCC------CCCChhhhhhhhhHHHHHHHHHHHHhc---CCcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 -GCKGVFHVASPCTLE------DPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                       .+|+||||||.....      ...+++...+++|+.++.++++++.+.   ..+++|++||..+.++.+..        
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~~--------  154 (255)
T PRK05717         83 GRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPDT--------  154 (255)
T ss_pred             CCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCCC--------
Confidence             479999999975421      122345789999999999999999642   23689999997765543332        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHhc--CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccC
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                                  ..|+.+|.+.+.+.+.++.+.  ++++++++||.+.++......  ...+........+      ...
T Consensus       155 ------------~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~--~~~~~~~~~~~~~------~~~  214 (255)
T PRK05717        155 ------------EAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRR--AEPLSEADHAQHP------AGR  214 (255)
T ss_pred             ------------cchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCcccccc--chHHHHHHhhcCC------CCC
Confidence                        579999999999999888775  599999999999997643221  1111111111111      234


Q ss_pred             cccHHHHHHHHHHhhcCC
Q 021819          228 AVPVKDVAKAQVLLFESP  245 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~  245 (307)
                      +.+++|++.++.+++...
T Consensus       215 ~~~~~~va~~~~~l~~~~  232 (255)
T PRK05717        215 VGTVEDVAAMVAWLLSRQ  232 (255)
T ss_pred             CcCHHHHHHHHHHHcCch
Confidence            679999999998888643

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.8e-23  Score=177.52  Aligned_cols=221  Identities=20%  Similarity=0.197  Sum_probs=154.0

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      .+++++++||||+|+||++++++|+++|+ +|++++|+.+..+.+..... .. ++.++.+|++|++++.++++      
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLP-GA-KVTATVADVADPAQVERVFDTAVERF   84 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHh-cC-ceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            35678999999999999999999999999 89999997654433322111 11 46889999999998887765      


Q ss_pred             -CccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHHH----hcCC-cEEEEecCcceeccCCCCCCccccc
Q 021819           80 -GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAK----RFGV-RRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                       ++|+|||++|....     ....+.+.+.+++|+.++.++++++.    ..+. ++++++||..+..+.+..       
T Consensus        85 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~-------  157 (264)
T PRK12829         85 GGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGR-------  157 (264)
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCC-------
Confidence             68999999997622     11233457889999999999999873    3344 678888886654443322       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCc--------chHHHHHHHHcCC
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN--------ASCAVLQQLLQGS  217 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~--------~~~~~~~~~~~~~  217 (307)
                                   ..|+.+|...+.+++.++.+   .+++++++|||.++|+.......        ............ 
T Consensus       158 -------------~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  223 (264)
T PRK12829        158 -------------TPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEK-  223 (264)
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhc-
Confidence                         46999999999998887765   38999999999999986432100        000001111110 


Q ss_pred             CCCCCCcccCcccHHHHHHHHHHhhcCC--CCCce-EEecC
Q 021819          218 KDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGR-YLCTN  255 (307)
Q Consensus       218 ~~~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~-~~~~~  255 (307)
                           .....+++++|+|+++..++...  ...|. |++.+
T Consensus       224 -----~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~  259 (264)
T PRK12829        224 -----ISLGRMVEPEDIAATALFLASPAARYITGQAISVDG  259 (264)
T ss_pred             -----CCCCCCCCHHHHHHHHHHHcCccccCccCcEEEeCC
Confidence                 02335899999999998887642  23454 45544

>PRK07985 oxidoreductase; Provisional

Probab=99.92  E-value=3.4e-23  Score=178.44  Aligned_cols=221  Identities=15%  Similarity=0.113  Sum_probs=153.6

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC--CcccccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      +++|+++||||+|+||+++++.|+++|+ +|++..|+...  .+.+.........++.++.+|++|++++.++++     
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  125 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA  125 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4458999999999999999999999999 88887764322  222221111111257789999999988877664     


Q ss_pred             --CccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 --GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                        ++|++||+||....     ....+++.+.+++|+.++.++++++...  ..++||++||..+..+.+..         
T Consensus       126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~~---------  196 (294)
T PRK07985        126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHL---------  196 (294)
T ss_pred             hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCCc---------
Confidence              47999999986421     2234556889999999999999998653  22689999997765443332         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                                 ..|+.+|...+.+.+.++.+   .|+++++++||.|+++...... .............+      ...
T Consensus       197 -----------~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~------~~r  258 (294)
T PRK07985        197 -----------LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGG-QTQDKIPQFGQQTP------MKR  258 (294)
T ss_pred             -----------chhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccC-CCHHHHHHHhccCC------CCC
Confidence                       46999999999998888766   5899999999999998642111 01122222222111      234


Q ss_pred             cccHHHHHHHHHHhhcCCC--CCceEEecC
Q 021819          228 AVPVKDVAKAQVLLFESPA--ASGRYLCTN  255 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~~--~~g~~~~~~  255 (307)
                      +..++|+|+++++++....  ..|..+..+
T Consensus       259 ~~~pedva~~~~fL~s~~~~~itG~~i~vd  288 (294)
T PRK07985        259 AGQPAELAPVYVYLASQESSYVTAEVHGVC  288 (294)
T ss_pred             CCCHHHHHHHHHhhhChhcCCccccEEeeC
Confidence            6789999999999886533  345544333

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3.2e-23  Score=174.86  Aligned_cols=224  Identities=16%  Similarity=0.163  Sum_probs=156.9

Q ss_pred             cccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc--
Q 021819            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE--   79 (307)
Q Consensus         3 ~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~--   79 (307)
                      +++.+++|+++||||+|+||+++++.|+++|+ +|++++|+....+.+.. +..... ++..+++|++|.+++.++++  
T Consensus         2 ~~~~l~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~   79 (252)
T PRK07035          2 NLFDLTGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGG-KAEALACHIGEMEQIDALFAHI   79 (252)
T ss_pred             CccccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHH
Confidence            34456678999999999999999999999999 89999987544332221 111111 57789999999988877665  


Q ss_pred             -----CccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcc
Q 021819           80 -----GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKV  145 (307)
Q Consensus        80 -----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~  145 (307)
                           .+|++||+||....     ....++++..+++|+.++..+++++    ++.+.+++|++||..+..+.+..    
T Consensus        80 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~----  155 (252)
T PRK07035         80 RERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQ----  155 (252)
T ss_pred             HHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCC----
Confidence                 47999999986431     2223345788999999998888777    44456799999997664433222    


Q ss_pred             cccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCC
Q 021819          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (307)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (307)
                                      ..|+.+|...+.+++.++++.   |+++++++||.|.++........ ...........+    
T Consensus       156 ----------------~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~~----  214 (252)
T PRK07035        156 ----------------GIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKN-DAILKQALAHIP----  214 (252)
T ss_pred             ----------------cchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCC-HHHHHHHHccCC----
Confidence                            579999999999999887653   89999999999987754322111 122222222111    


Q ss_pred             CcccCcccHHHHHHHHHHhhcCCC--CCceEEecC
Q 021819          223 YHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTN  255 (307)
Q Consensus       223 ~~~~~~i~~~dva~~~~~~~~~~~--~~g~~~~~~  255 (307)
                        ...+..++|+|+++++++....  ..|.++..+
T Consensus       215 --~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~d  247 (252)
T PRK07035        215 --LRRHAEPSEMAGAVLYLASDASSYTTGECLNVD  247 (252)
T ss_pred             --CCCcCCHHHHHHHHHHHhCccccCccCCEEEeC
Confidence              2346789999999999887543  346544333

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=3.1e-23  Score=175.38  Aligned_cols=217  Identities=20%  Similarity=0.208  Sum_probs=153.0

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC-ccc-ccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~-~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +|+++||||+|+||+++++.|+++|+ +|++++|+.... ... ..+..... ++.++++|++|++++.++++       
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGF-DLAINDRPDDEELAATQQELRALGV-EVIFFPADVADLSAHEAMLDAAQAAWG   79 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            36899999999999999999999999 899988864332 111 11111111 68899999999988877665       


Q ss_pred             CccEEEEeccCCCCC------CCCChhhhhhhhhHHHHHHHHHHHHhc-----C-----CcEEEEecCcceeccCCCCCC
Q 021819           80 GCKGVFHVASPCTLE------DPVDPEKELILPAVQGTLNVLEAAKRF-----G-----VRRVVVTSSISAIVPNPGWKG  143 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~-----~~~~v~iSS~~~~~~~~~~~~  143 (307)
                      .+|+||||||.....      ...+.+.+.+++|+.++.++++++...     +     .++||++||..+.++....  
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--  157 (256)
T PRK12745         80 RIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNR--  157 (256)
T ss_pred             CCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCC--
Confidence            579999999875321      123456788999999999999887432     1     4679999997765544332  


Q ss_pred             cccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCC
Q 021819          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT  220 (307)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  220 (307)
                                        +.|+.+|.+.+.+++.++.+   +++++++++||.+.++......   .........+..  
T Consensus       158 ------------------~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~---~~~~~~~~~~~~--  214 (256)
T PRK12745        158 ------------------GEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVT---AKYDALIAKGLV--  214 (256)
T ss_pred             ------------------cccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccc---hhHHhhhhhcCC--
Confidence                              57999999999999988764   6899999999999987643321   111111111111  


Q ss_pred             CCCcccCcccHHHHHHHHHHhhcCCC--CCce-EEecC
Q 021819          221 QEYHWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (307)
Q Consensus       221 ~~~~~~~~i~~~dva~~~~~~~~~~~--~~g~-~~~~~  255 (307)
                         ....+.+++|+++++.+++....  ..|. |++.+
T Consensus       215 ---~~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~g  249 (256)
T PRK12745        215 ---PMPRWGEPEDVARAVAALASGDLPYSTGQAIHVDG  249 (256)
T ss_pred             ---CcCCCcCHHHHHHHHHHHhCCcccccCCCEEEECC
Confidence               13457799999999998886442  2354 55544

>PRK06398 aldose dehydrogenase; Validated

Probab=99.92  E-value=7.2e-23  Score=173.30  Aligned_cols=213  Identities=15%  Similarity=0.115  Sum_probs=152.1

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++++|+.....           ++.++++|++|++++.++++      
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----------~~~~~~~D~~~~~~i~~~~~~~~~~~   70 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----------DVDYFKVDVSNKEQVIKGIDYVISKY   70 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----------ceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45578999999999999999999999999 8999988654321           57889999999998887765      


Q ss_pred             -CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                       .+|+||||||.....    ...+++.+.+++|+.++.++++++.+    .+.+++|++||..+..+.+..         
T Consensus        71 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  141 (258)
T PRK06398         71 GRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNA---------  141 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCC---------
Confidence             579999999975431    22335678899999999999888743    355799999997664433322         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHhc--CCcEEEEecCceeCCCCCCCC-----cc---hHHHHHHHHcCCCCC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYL-----NA---SCAVLQQLLQGSKDT  220 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~i~~~ivrp~~v~g~~~~~~~-----~~---~~~~~~~~~~~~~~~  220 (307)
                                 ..|+.+|...+.+.+.++.+.  ++++++++||.+.++......     ..   ............   
T Consensus       142 -----------~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  207 (258)
T PRK06398        142 -----------AAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMH---  207 (258)
T ss_pred             -----------chhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcC---
Confidence                       579999999999999887764  499999999999876432110     00   000011111111   


Q ss_pred             CCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCC
Q 021819          221 QEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNG  256 (307)
Q Consensus       221 ~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~  256 (307)
                         ....+..++|+|+++++++...  ...|..+..++
T Consensus       208 ---~~~~~~~p~eva~~~~~l~s~~~~~~~G~~i~~dg  242 (258)
T PRK06398        208 ---PMKRVGKPEEVAYVVAFLASDLASFITGECVTVDG  242 (258)
T ss_pred             ---CcCCCcCHHHHHHHHHHHcCcccCCCCCcEEEECC
Confidence               1234678999999999888643  23465444433

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.92  E-value=2.8e-23  Score=175.05  Aligned_cols=227  Identities=15%  Similarity=0.104  Sum_probs=156.8

Q ss_pred             CccccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-
Q 021819            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (307)
Q Consensus         1 m~~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-   79 (307)
                      |. |+.+++|+++||||+++||+++++.|+++|+ +|+++.|+.... .......... ++.++.+|++|++++.++++ 
T Consensus         1 ~~-~~~l~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~-~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~   76 (251)
T PRK12481          1 MQ-LFDLNGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPE-TQAQVEALGR-KFHFITADLIQQKDIDSIVSQ   76 (251)
T ss_pred             CC-CcccCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHH-HHHHHHHcCC-eEEEEEeCCCCHHHHHHHHHH
Confidence            44 3345678999999999999999999999999 888887753221 1111111111 68889999999999888775 


Q ss_pred             ------CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cC-CcEEEEecCcceeccCCCCCCc
Q 021819           80 ------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGK  144 (307)
Q Consensus        80 ------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~iSS~~~~~~~~~~~~~  144 (307)
                            ++|++|||||.....    ...++++..+++|+.++..+.+++.+    .+ .+++|++||..+..+.+..   
T Consensus        77 ~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~---  153 (251)
T PRK12481         77 AVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRV---  153 (251)
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCC---
Confidence                  479999999975432    22345788999999999988887743    33 3689999997765443332   


Q ss_pred             ccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC
Q 021819          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ  221 (307)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  221 (307)
                                       ..|+.+|.+.+.+.+.++.+   +|+++++++||.|.++....... ............+   
T Consensus       154 -----------------~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~p---  212 (251)
T PRK12481        154 -----------------PSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRA-DTARNEAILERIP---  212 (251)
T ss_pred             -----------------cchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhccc-ChHHHHHHHhcCC---
Confidence                             46999999998888877664   58999999999998875332110 1111112222111   


Q ss_pred             CCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCcc
Q 021819          222 EYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIY  258 (307)
Q Consensus       222 ~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~  258 (307)
                         ...+..++|+|+++.+++...  ...|..+..++++
T Consensus       213 ---~~~~~~peeva~~~~~L~s~~~~~~~G~~i~vdgg~  248 (251)
T PRK12481        213 ---ASRWGTPDDLAGPAIFLSSSASDYVTGYTLAVDGGW  248 (251)
T ss_pred             ---CCCCcCHHHHHHHHHHHhCccccCcCCceEEECCCE
Confidence               234678999999999988643  3446555444443

>PLN02253 xanthoxin dehydrogenase

Probab=99.92  E-value=3.4e-23  Score=177.48  Aligned_cols=224  Identities=20%  Similarity=0.174  Sum_probs=154.9

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      .++|+++||||+|+||++++++|+++|+ +|++++|+....+.+....... .++.++++|++|.+++.++++       
T Consensus        16 l~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~~~~~g   93 (280)
T PLN02253         16 LLGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGE-PNVCFFHCDVTVEDDVSRAVDFTVDKFG   93 (280)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCC-CceEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            3468999999999999999999999999 8999888654433222211111 268899999999999888776       


Q ss_pred             CccEEEEeccCCCC------CCCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 GCKGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 ~~d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                      ++|+||||||....      +...+++...+++|+.++.++++++.+    .+.+++|++||..+.++.+..        
T Consensus        94 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~--------  165 (280)
T PLN02253         94 TLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGP--------  165 (280)
T ss_pred             CCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCC--------
Confidence            58999999997532      112345678999999999999988753    334689999997765544332        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCC---cchHHHHH---HHH-cCCCC
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYL---NASCAVLQ---QLL-QGSKD  219 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~---~~~~~~~~---~~~-~~~~~  219 (307)
                                  ..|+.+|.+.+.+.+.++.+.   ++++++++||.+.++......   ......+.   ... .+.+ 
T Consensus       166 ------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  232 (280)
T PLN02253        166 ------------HAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNAN-  232 (280)
T ss_pred             ------------cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCC-
Confidence                        469999999999999887764   899999999999887532110   00001111   111 1111 


Q ss_pred             CCCCcccCcccHHHHHHHHHHhhcCCC--CCceEEecCCc
Q 021819          220 TQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGI  257 (307)
Q Consensus       220 ~~~~~~~~~i~~~dva~~~~~~~~~~~--~~g~~~~~~~~  257 (307)
                          .....++++|+|+++++++....  ..|..+..+++
T Consensus       233 ----l~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG  268 (280)
T PLN02253        233 ----LKGVELTVDDVANAVLFLASDEARYISGLNLMIDGG  268 (280)
T ss_pred             ----CcCCCCCHHHHHHHHHhhcCcccccccCcEEEECCc
Confidence                01234789999999999886432  24543333333

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.7e-23  Score=175.09  Aligned_cols=220  Identities=24%  Similarity=0.234  Sum_probs=157.0

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      ..++|+++||||+|+||++|++.|+++|+ +|+++.|++.+...... +..... ++.++++|++|+++++++++     
T Consensus         4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (250)
T PRK12939          4 NLAGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGG-RAHAIAADLADPASVQRFFDAAAAA   81 (250)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHH
Confidence            34568999999999999999999999999 89888887654333221 111112 68899999999999887774     


Q ss_pred             --CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                        ++|+|||++|.....    ...+.+...++.|+.++.++++++.+    .+.+++|++||..+..+.+..        
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  153 (250)
T PRK12939         82 LGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKL--------  153 (250)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCc--------
Confidence              589999999975431    12234567788999999999988754    344699999997664443332        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                                  ..|+.+|...+.+++.++.+   .++++++++||.+.++.......  ..+........      ...
T Consensus       154 ------------~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~------~~~  213 (250)
T PRK12939        154 ------------GAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA--DERHAYYLKGR------ALE  213 (250)
T ss_pred             ------------chHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC--hHHHHHHHhcC------CCC
Confidence                        56999999999999877654   48999999999998876433211  01222222221      234


Q ss_pred             CcccHHHHHHHHHHhhcCCC--CCceEEecC
Q 021819          227 GAVPVKDVAKAQVLLFESPA--ASGRYLCTN  255 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~~--~~g~~~~~~  255 (307)
                      .+++++|+|++++.++..+.  ..|.++..+
T Consensus       214 ~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~  244 (250)
T PRK12939        214 RLQVPDDVAGAVLFLLSDAARFVTGQLLPVN  244 (250)
T ss_pred             CCCCHHHHHHHHHHHhCccccCccCcEEEEC
Confidence            57899999999999997643  346554433

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.4e-23  Score=176.24  Aligned_cols=219  Identities=18%  Similarity=0.160  Sum_probs=154.9

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +++++++||||+|+||++++++|+++|+ .|++++|+++..+....+..... ++.++.+|+++++++.++++       
T Consensus         5 l~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK08628          5 LKDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQP-RAEFVQVDLTDDAQCRDAVEQTVAKFG   82 (258)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4568999999999999999999999999 88888887654422222211122 68899999999999888775       


Q ss_pred             CccEEEEeccCCCCC---CCCChhhhhhhhhHHHHHHHHHHHHh---cCCcEEEEecCcceeccCCCCCCcccccCCCCc
Q 021819           80 GCKGVFHVASPCTLE---DPVDPEKELILPAVQGTLNVLEAAKR---FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~  153 (307)
                      .+|+|||+||.....   ...+++...+++|+.++.++.+.+.+   .+.++||++||..+.++.+..            
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~------------  150 (258)
T PRK08628         83 RIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGGT------------  150 (258)
T ss_pred             CCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCCC------------
Confidence            579999999964321   11245678899999999999988753   234689999997776543332            


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCC---cchHHHHHHHHcCCCCCCCCcccC
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL---NASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                              ..|+.+|...+.+++.++.+   .+++++.++||.|+++......   ..............+  .   ...
T Consensus       151 --------~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~  217 (258)
T PRK08628        151 --------SGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIP--L---GHR  217 (258)
T ss_pred             --------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCC--c---ccc
Confidence                    57999999999999988754   4899999999999998532210   000111111111111  0   124


Q ss_pred             cccHHHHHHHHHHhhcCC--CCCceEE
Q 021819          228 AVPVKDVAKAQVLLFESP--AASGRYL  252 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~--~~~g~~~  252 (307)
                      +++++|+|+++++++...  ...|.++
T Consensus       218 ~~~~~dva~~~~~l~~~~~~~~~g~~~  244 (258)
T PRK08628        218 MTTAEEIADTAVFLLSERSSHTTGQWL  244 (258)
T ss_pred             CCCHHHHHHHHHHHhChhhccccCceE
Confidence            688999999999999764  3446543

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.1e-23  Score=174.37  Aligned_cols=206  Identities=21%  Similarity=0.239  Sum_probs=150.7

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcc-cccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH-LFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      ..++|+++||||+|+||+++++.|+++|+ +|++++|+..+... ...+...   ++..+.+|+.|.++++++++     
T Consensus         4 ~~~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~   79 (239)
T PRK12828          4 SLQGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPAD---ALRIGGIDLVDPQAARRAVDEVNRQ   79 (239)
T ss_pred             CCCCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhc---CceEEEeecCCHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999 89999997654322 1112111   56788899999988887775     


Q ss_pred             --CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                        ++|+|||+++.....    ...+.+.+.+..|+.++.++++++.    +.+.+++|++||..+..+.+..        
T Consensus        80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--------  151 (239)
T PRK12828         80 FGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGM--------  151 (239)
T ss_pred             hCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCc--------
Confidence              579999999865421    1222346778899999999998874    3567899999997664432221        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                                  ..|+.+|...+.+++.+++.   .+++++++||+.++++.......                 .....
T Consensus       152 ------------~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~-----------------~~~~~  202 (239)
T PRK12828        152 ------------GAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMP-----------------DADFS  202 (239)
T ss_pred             ------------chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCC-----------------chhhh
Confidence                        46999999988888776654   58999999999999874221100                 00123


Q ss_pred             CcccHHHHHHHHHHhhcCCC--CCceEE
Q 021819          227 GAVPVKDVAKAQVLLFESPA--ASGRYL  252 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~~--~~g~~~  252 (307)
                      .+++++|+|+++.+++.+..  ..|.++
T Consensus       203 ~~~~~~dva~~~~~~l~~~~~~~~g~~~  230 (239)
T PRK12828        203 RWVTPEQIAAVIAFLLSDEAQAITGASI  230 (239)
T ss_pred             cCCCHHHHHHHHHHHhCcccccccceEE
Confidence            47899999999999998653  346543

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.92  E-value=2.7e-23  Score=198.12  Aligned_cols=219  Identities=15%  Similarity=0.166  Sum_probs=156.0

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVF   85 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~vi   85 (307)
                      ..|+||||||+||||++|++.|.++|+ +|..                        ..+|++|.+.+.+.++  ++|+||
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~-~v~~------------------------~~~~l~d~~~v~~~i~~~~pd~Vi  433 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGI-AYEY------------------------GKGRLEDRSSLLADIRNVKPTHVF  433 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCC-eEEe------------------------eccccccHHHHHHHHHhhCCCEEE
Confidence            356999999999999999999999998 6621                        1146788888888776  789999


Q ss_pred             EeccCCCC---CCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCC----CCCCcccccCCCCchhhhc
Q 021819           86 HVASPCTL---EDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNP----GWKGKVFDETSWTDLEYCK  158 (307)
Q Consensus        86 ~~a~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~----~~~~~~~~E~~~~~~~~~~  158 (307)
                      |||+....   +....+....+++|+.++.+++++|++.+++ +|++||.. +|+..    .....+++|++++.+.   
T Consensus       434 h~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~-~v~~Ss~~-v~~~~~~~~~~~~~p~~E~~~~~~~---  508 (668)
T PLN02260        434 NAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLL-MMNFATGC-IFEYDAKHPEGSGIGFKEEDKPNFT---  508 (668)
T ss_pred             ECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCe-EEEEcccc-eecCCcccccccCCCCCcCCCCCCC---
Confidence            99997642   2223456789999999999999999999985 67777744 44321    1112467887754432   


Q ss_pred             ccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCC-CCCCCcccCcccHHHHHHH
Q 021819          159 SRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK-DTQEYHWLGAVPVKDVAKA  237 (307)
Q Consensus       159 ~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~dva~~  237 (307)
                        .+.|+.+|.++|.+++.+.     ++.++|+..+|+.......    .++..+..... +.++   .+..+.+|++.+
T Consensus       509 --~~~Yg~sK~~~E~~~~~~~-----~~~~~r~~~~~~~~~~~~~----nfv~~~~~~~~~~~vp---~~~~~~~~~~~~  574 (668)
T PLN02260        509 --GSFYSKTKAMVEELLREYD-----NVCTLRVRMPISSDLSNPR----NFITKISRYNKVVNIP---NSMTVLDELLPI  574 (668)
T ss_pred             --CChhhHHHHHHHHHHHhhh-----hheEEEEEEecccCCCCcc----HHHHHHhccceeeccC---CCceehhhHHHH
Confidence              1679999999999997542     5667777778864432222    23333333322 2233   346777889988


Q ss_pred             HHHhhcCCCCCceEEecC-CcccHHHHHHHHHHhC
Q 021819          238 QVLLFESPAASGRYLCTN-GIYQFGDFAERVSKLF  271 (307)
Q Consensus       238 ~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~  271 (307)
                      ++.+++. ...|.||+++ +.+|+.|+++.+.+.+
T Consensus       575 ~~~l~~~-~~~giyni~~~~~~s~~e~a~~i~~~~  608 (668)
T PLN02260        575 SIEMAKR-NLRGIWNFTNPGVVSHNEILEMYKDYI  608 (668)
T ss_pred             HHHHHHh-CCCceEEecCCCcCcHHHHHHHHHHhc
Confidence            8888874 3358999876 4599999999998876

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.92  E-value=8.4e-23  Score=172.29  Aligned_cols=215  Identities=18%  Similarity=0.125  Sum_probs=154.4

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcC------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG------   80 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~------   80 (307)
                      +++|+++||||+|+||++++++|+++|+ +|++++|+.     ....   . .++..+++|++|++++.+++++      
T Consensus         6 ~~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~---~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~   75 (252)
T PRK08220          6 FSGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQE---D-YPFATFVLDVSDAAAVAQVCQRLLAETG   75 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhc---C-CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4568999999999999999999999999 899998875     1111   1 1688899999999998887763      


Q ss_pred             -ccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           81 -CKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        81 -~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                       +|+||||+|......    ..+.+...+++|+.++.++++++..    .+.++||++||..+..+....          
T Consensus        76 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~----------  145 (252)
T PRK08220         76 PLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGM----------  145 (252)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCC----------
Confidence             799999999754321    2335678899999999999998743    455789999996654332221          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcc-------hHHHHHHHHcCCCCCC
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNA-------SCAVLQQLLQGSKDTQ  221 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~-------~~~~~~~~~~~~~~~~  221 (307)
                                ..|+.+|...+.+.+.++.+   .++++++++|+.++++........       ..........+.    
T Consensus       146 ----------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  211 (252)
T PRK08220        146 ----------AAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGI----  211 (252)
T ss_pred             ----------chhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcC----
Confidence                      57999999999998887766   689999999999999864321000       000011111111    


Q ss_pred             CCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          222 EYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       222 ~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                        ....+++++|+|+++++++...  ...|..+..+++
T Consensus       212 --~~~~~~~~~dva~~~~~l~~~~~~~~~g~~i~~~gg  247 (252)
T PRK08220        212 --PLGKIARPQEIANAVLFLASDLASHITLQDIVVDGG  247 (252)
T ss_pred             --CCcccCCHHHHHHHHHHHhcchhcCccCcEEEECCC
Confidence              2456889999999999988643  333554444433

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.91  E-value=4.6e-23  Score=173.50  Aligned_cols=205  Identities=20%  Similarity=0.180  Sum_probs=148.2

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC-cccc----cCCCCCCCceEEEEcccCChhHHHHHhc---
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLF----ALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~----~~~~~~~~~~~~i~~D~~d~~~~~~~~~---   79 (307)
                      ++|+++||||+|+||+++++.|+++|+ +|++++|..... ....    ....... ++.++.+|++|+++++++++   
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~   82 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADGA-DVIVLDIHPMRGRAEADAVAAGIEAAGG-KALGLAFDVRDFAATRAALDAGV   82 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEcCcccccHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHH
Confidence            467999999999999999999999999 888877632211 1111    1111112 67899999999998887764   


Q ss_pred             ----CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHH-----hcCCcEEEEecCcceeccCCCCCCccc
Q 021819           80 ----GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK-----RFGVRRVVVTSSISAIVPNPGWKGKVF  146 (307)
Q Consensus        80 ----~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~v~iSS~~~~~~~~~~~~~~~  146 (307)
                          ++|+|||+||....    ....+.+...+++|+.++.++++++.     +.+.+++|++||..+.++....     
T Consensus        83 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-----  157 (249)
T PRK12827         83 EEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQ-----  157 (249)
T ss_pred             HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCC-----
Confidence                57999999997653    12223457789999999999999997     4566789999997776554332     


Q ss_pred             ccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCC
Q 021819          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (307)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (307)
                                     ..|+.+|...+.+.+.++.+   .+++++++|||.++++......  ..   .......+     
T Consensus       158 ---------------~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~--~~---~~~~~~~~-----  212 (249)
T PRK12827        158 ---------------VNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAA--PT---EHLLNPVP-----  212 (249)
T ss_pred             ---------------chhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccc--hH---HHHHhhCC-----
Confidence                           56999999999888877665   4899999999999998644321  11   11111111     


Q ss_pred             cccCcccHHHHHHHHHHhhcCC
Q 021819          224 HWLGAVPVKDVAKAQVLLFESP  245 (307)
Q Consensus       224 ~~~~~i~~~dva~~~~~~~~~~  245 (307)
                       ...+.+++|+++++++++...
T Consensus       213 -~~~~~~~~~va~~~~~l~~~~  233 (249)
T PRK12827        213 -VQRLGEPDEVAALVAFLVSDA  233 (249)
T ss_pred             -CcCCcCHHHHHHHHHHHcCcc
Confidence             122458999999999888654

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.91  E-value=2.1e-23  Score=179.18  Aligned_cols=208  Identities=18%  Similarity=0.227  Sum_probs=150.0

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHh------cC-ccE
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV------EG-CKG   83 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~------~~-~d~   83 (307)
                      +|+||||||++|++++++|+++|+ +|++++|+++....   .      +++.+.+|++|++++.+++      ++ +|.
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~-~V~~~~R~~~~~~~---~------~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~   70 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASV-PFLVASRSSSSSAG---P------NEKHVKFDWLDEDTWDNPFSSDDGMEPEISA   70 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCC-cEEEEeCCCccccC---C------CCccccccCCCHHHHHHHHhcccCcCCceeE
Confidence            489999999999999999999999 99999998764321   1      5667889999999999988      56 999


Q ss_pred             EEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCcc
Q 021819           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (307)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (307)
                      |+|+++...     +.        .....+++++|++.|++|||++||.....+  .                       
T Consensus        71 v~~~~~~~~-----~~--------~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~--~-----------------------  112 (285)
T TIGR03649        71 VYLVAPPIP-----DL--------APPMIKFIDFARSKGVRRFVLLSASIIEKG--G-----------------------  112 (285)
T ss_pred             EEEeCCCCC-----Ch--------hHHHHHHHHHHHHcCCCEEEEeeccccCCC--C-----------------------
Confidence            999976421     10        234568999999999999999998543211  0                       


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCC--CCCCcccCcccHHHHHHHHHHh
Q 021819          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD--TQEYHWLGAVPVKDVAKAQVLL  241 (307)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~dva~~~~~~  241 (307)
                        ..+...|++++.   ..+++++++||+.++.+.....      ....+.....+  ..++..++|++++|+|+++..+
T Consensus       113 --~~~~~~~~~l~~---~~gi~~tilRp~~f~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~  181 (285)
T TIGR03649       113 --PAMGQVHAHLDS---LGGVEYTVLRPTWFMENFSEEF------HVEAIRKENKIYSATGDGKIPFVSADDIARVAYRA  181 (285)
T ss_pred             --chHHHHHHHHHh---ccCCCEEEEeccHHhhhhcccc------cccccccCCeEEecCCCCccCcccHHHHHHHHHHH
Confidence              011223444431   1499999999998886542111      01111121221  1245788999999999999999


Q ss_pred             hcCCCCC-ceEEec-CCcccHHHHHHHHHHhCCCCCCCc
Q 021819          242 FESPAAS-GRYLCT-NGIYQFGDFAERVSKLFPEFPVHR  278 (307)
Q Consensus       242 ~~~~~~~-g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  278 (307)
                      +..+... +.|++. ++.+|+.|+++.+.+.+ +.+++.
T Consensus       182 l~~~~~~~~~~~l~g~~~~s~~eia~~l~~~~-g~~v~~  219 (285)
T TIGR03649       182 LTDKVAPNTDYVVLGPELLTYDDVAEILSRVL-GRKITH  219 (285)
T ss_pred             hcCCCcCCCeEEeeCCccCCHHHHHHHHHHHh-CCceEE
Confidence            9876544 467655 57899999999999999 666554

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.91  E-value=4.1e-23  Score=174.64  Aligned_cols=223  Identities=19%  Similarity=0.158  Sum_probs=159.4

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++++|+.+....+.. +...+. ++.++.+|++|++++.++++     
T Consensus         8 ~~~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (256)
T PRK06124          8 SLAGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGG-AAEALAFDIADEEAVAAAFARIDAE   85 (256)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHh
Confidence            45689999999999999999999999999 89999997644332221 111122 58899999999998887775     


Q ss_pred             --CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                        .+|+|||++|.....    ...+++.+.+++|+.++.++++++.+    .+.+++|++||..+..+.+..        
T Consensus        86 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~--------  157 (256)
T PRK06124         86 HGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGD--------  157 (256)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCc--------
Confidence              459999999975431    12235578899999999999977754    566799999997765444332        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                                  ..|+.+|...+.+.+.++.+   .++++++++|+.+.++....... ...+........      ...
T Consensus       158 ------------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~-~~~~~~~~~~~~------~~~  218 (256)
T PRK06124        158 ------------AVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAA-DPAVGPWLAQRT------PLG  218 (256)
T ss_pred             ------------cHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhcc-ChHHHHHHHhcC------CCC
Confidence                        56999999999888877655   38999999999999986432211 112222222211      123


Q ss_pred             CcccHHHHHHHHHHhhcCCC--CCceEEecCCc
Q 021819          227 GAVPVKDVAKAQVLLFESPA--ASGRYLCTNGI  257 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~~--~~g~~~~~~~~  257 (307)
                      .+++++|++.++++++..+.  ..|.++..+++
T Consensus       219 ~~~~~~~~a~~~~~l~~~~~~~~~G~~i~~dgg  251 (256)
T PRK06124        219 RWGRPEEIAGAAVFLASPAASYVNGHVLAVDGG  251 (256)
T ss_pred             CCCCHHHHHHHHHHHcCcccCCcCCCEEEECCC
Confidence            57899999999999997653  34766554443

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=1.7e-23  Score=176.56  Aligned_cols=226  Identities=14%  Similarity=0.078  Sum_probs=153.8

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC-Ccc-cccCCCCCCCceEEEEcccCChhHHHHHhc--
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSH-LFALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~-~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--   79 (307)
                      |+..++++|+||||+|+||++++++|+++|+ +|++..|+... ... ...+..... ++.++.+|+++++++.++++  
T Consensus         1 ~~~~~~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~   78 (252)
T PRK06077          1 MYSLKDKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGG-EGIGVLADVSTREGCETLAKAT   78 (252)
T ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCC-eeEEEEeccCCHHHHHHHHHHH
Confidence            3444578999999999999999999999999 77776654322 111 111111111 56788999999988877765  


Q ss_pred             -----CccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 -----GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 -----~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                           .+|+|||+||......    ..+.....+++|+.++.++++++.+.  ..++||++||..++.+.+..       
T Consensus        79 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-------  151 (252)
T PRK06077         79 IDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYGL-------  151 (252)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCCc-------
Confidence                 5799999999744321    11223678899999999999988754  23589999997654333221       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc--CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                                   ..|+.+|...+.+++.++++.  ++++++++||.+.++....................     ....
T Consensus       152 -------------~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~-----~~~~  213 (252)
T PRK06077        152 -------------SIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKF-----TLMG  213 (252)
T ss_pred             -------------hHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHhc-----CcCC
Confidence                         579999999999999888765  79999999999988753221000000000111100     1234


Q ss_pred             CcccHHHHHHHHHHhhcCCCCCc-eEEecCC
Q 021819          227 GAVPVKDVAKAQVLLFESPAASG-RYLCTNG  256 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~~~~g-~~~~~~~  256 (307)
                      .+++++|+|+++++++..+...| .|++.++
T Consensus       214 ~~~~~~dva~~~~~~~~~~~~~g~~~~i~~g  244 (252)
T PRK06077        214 KILDPEEVAEFVAAILKIESITGQVFVLDSG  244 (252)
T ss_pred             CCCCHHHHHHHHHHHhCccccCCCeEEecCC
Confidence            68999999999999998665545 4666543

>PRK08589 short chain dehydrogenase; Validated

Probab=99.91  E-value=5.8e-23  Score=175.23  Aligned_cols=225  Identities=20%  Similarity=0.177  Sum_probs=152.3

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcc-cccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH-LFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      +++|+++||||+|+||+++++.|+++|+ +|++++|+ +.... ...+..... ++..+++|++|++++.++++      
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~-~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~   80 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIA-EAVSETVDKIKSNGG-KAKAYHVDISDEQQVKDFASEIKEQF   80 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCc-HHHHHHHHHHHhcCC-eEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999 89999987 33322 222211112 68899999999988877765      


Q ss_pred             -CccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 -GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                       .+|++|||||....     ....+.+.+.+++|+.++..+++++.    +.+ +++|++||..+..+.+..        
T Consensus        81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~--------  151 (272)
T PRK08589         81 GRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYR--------  151 (272)
T ss_pred             CCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCC--------
Confidence             47999999997532     11223457888999999988777763    334 689999997765443332        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchH-HHHHHHHcCCCCCCCCcc
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASC-AVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  225 (307)
                                  ..|+.+|...+.+++.++.+   .|+++++++||.|.++.......... .+............  ..
T Consensus       152 ------------~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  217 (272)
T PRK08589        152 ------------SGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMT--PL  217 (272)
T ss_pred             ------------chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccC--CC
Confidence                        56999999999998888765   37999999999998875432111000 00011110000000  12


Q ss_pred             cCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          226 LGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                      ..+.+++|+|+++++++...  ...|..+..+++
T Consensus       218 ~~~~~~~~va~~~~~l~s~~~~~~~G~~i~vdgg  251 (272)
T PRK08589        218 GRLGKPEEVAKLVVFLASDDSSFITGETIRIDGG  251 (272)
T ss_pred             CCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCC
Confidence            23578999999999988643  334655444433

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.91  E-value=4.5e-23  Score=174.62  Aligned_cols=223  Identities=15%  Similarity=0.097  Sum_probs=154.8

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      .+++|+++||||+|+||+++++.|++.|+ +|+++.|+ ...+.+.........++.++++|++|.+++.++++      
T Consensus        12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   89 (258)
T PRK06935         12 SLDGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEF   89 (258)
T ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45678999999999999999999999999 88888886 33222222111111268899999999998888776      


Q ss_pred             -CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                       .+|++||+||.....    ...+.++..+++|+.++.++++++.    +.+.+++|++||..+..+.+..         
T Consensus        90 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  160 (258)
T PRK06935         90 GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFV---------  160 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCc---------
Confidence             579999999975421    1233567889999999888887764    4456789999997664433322         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                                 ..|+.+|.+.+.+.+.++++   .|+++++++||.|.++........ ...........      ....
T Consensus       161 -----------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~------~~~~  222 (258)
T PRK06935        161 -----------PAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRAD-KNRNDEILKRI------PAGR  222 (258)
T ss_pred             -----------hhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccC-hHHHHHHHhcC------CCCC
Confidence                       46999999999998888775   389999999999988754321110 11111111111      1345


Q ss_pred             cccHHHHHHHHHHhhcCCC--CCceEEecCCc
Q 021819          228 AVPVKDVAKAQVLLFESPA--ASGRYLCTNGI  257 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~~--~~g~~~~~~~~  257 (307)
                      +..++|+|..+.+++....  ..|..+..+++
T Consensus       223 ~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg  254 (258)
T PRK06935        223 WGEPDDLMGAAVFLASRASDYVNGHILAVDGG  254 (258)
T ss_pred             CCCHHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence            7889999999988886432  34554444433

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.9e-23  Score=175.63  Aligned_cols=197  Identities=18%  Similarity=0.126  Sum_probs=147.8

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcC-------c
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG-------C   81 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-------~   81 (307)
                      +|+++||||+|+||+++++.|+++|+ +|++++|+.+............. ++.++++|++|++++.++++.       +
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~i   79 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAHGLP   79 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            46999999999999999999999999 89999987654433322211112 578999999999998877653       7


Q ss_pred             cEEEEeccCCCCC-----CCCChhhhhhhhhHHHHHHHHH----HHHhcCCcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           82 KGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLE----AAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        82 d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~----~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      |++||+||.....     ...+.+...+++|+.++.++++    .+++.+.++||++||..++++.+..           
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~-----------  148 (257)
T PRK07024         80 DVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGA-----------  148 (257)
T ss_pred             CEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCC-----------
Confidence            9999999975431     1223467889999999999877    4455666899999998776554432           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHH---hcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcc
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (307)
                               ..|+.+|...+.+.+.++.   ..++++++++||.+.++......             .      ....++
T Consensus       149 ---------~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~-------------~------~~~~~~  200 (257)
T PRK07024        149 ---------GAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP-------------Y------PMPFLM  200 (257)
T ss_pred             ---------cchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcCC-------------C------CCCCcc
Confidence                     5699999999999887763   45899999999999887532110             0      011236


Q ss_pred             cHHHHHHHHHHhhcCCC
Q 021819          230 PVKDVAKAQVLLFESPA  246 (307)
Q Consensus       230 ~~~dva~~~~~~~~~~~  246 (307)
                      +++++|+.++.++.+..
T Consensus       201 ~~~~~a~~~~~~l~~~~  217 (257)
T PRK07024        201 DADRFAARAARAIARGR  217 (257)
T ss_pred             CHHHHHHHHHHHHhCCC
Confidence            89999999999998644

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.91  E-value=3.8e-23  Score=174.52  Aligned_cols=225  Identities=18%  Similarity=0.099  Sum_probs=157.3

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      .+++|+++||||+|+||++++++|+++|+ +|++++|+.+..+...........++..+.+|++|.+++.++++      
T Consensus         4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   82 (253)
T PRK06172          4 TFSGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY   82 (253)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            35678999999999999999999999999 89999997654332221111111268899999999998887765      


Q ss_pred             -CccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 -GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                       .+|+|||++|....     +...+++.+.+++|+.++.++++++    .+.+.+++|++||..++.+.+..        
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~--------  154 (253)
T PRK06172         83 GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKM--------  154 (253)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCC--------
Confidence             45999999997432     1123456788999999998777654    34455789999997765543332        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                                  ..|+.+|.+.+.+.+.++.+.   ++++++++||.|.++....................+      ..
T Consensus       155 ------------~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~~  216 (253)
T PRK06172        155 ------------SIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHP------VG  216 (253)
T ss_pred             ------------chhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCC------CC
Confidence                        569999999999998887664   799999999999877543221111122222211111      23


Q ss_pred             CcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          227 GAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                      .+..++|+++.+++++...  ...|.++..+++
T Consensus       217 ~~~~p~~ia~~~~~l~~~~~~~~~G~~i~~dgg  249 (253)
T PRK06172        217 RIGKVEEVASAVLYLCSDGASFTTGHALMVDGG  249 (253)
T ss_pred             CccCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence            4578999999999988754  345766544443

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.91  E-value=5.4e-23  Score=174.10  Aligned_cols=220  Identities=18%  Similarity=0.157  Sum_probs=152.7

Q ss_pred             cccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC-CCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc-
Q 021819            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-   79 (307)
Q Consensus         3 ~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~-~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~-   79 (307)
                      +|+++.+|+++||||+|+||+++++.|+++|+ +|+++.++. +..+.+.. +.... .++.++++|++|.+++.++++ 
T Consensus         3 ~~~~~~~k~vlItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~   80 (258)
T PRK09134          3 PMSMAAPRAALVTGAARRIGRAIALDLAAHGF-DVAVHYNRSRDEAEALAAEIRALG-RRAVALQADLADEAEVRALVAR   80 (258)
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcC-CeEEEEEcCCCCHHHHHHHHHH
Confidence            35556678999999999999999999999999 787766643 22222111 11111 168889999999998887765 


Q ss_pred             ------CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc----CCcEEEEecCcceeccCCCCCCcc
Q 021819           80 ------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGKV  145 (307)
Q Consensus        80 ------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~iSS~~~~~~~~~~~~~~  145 (307)
                            .+|+||||||.....    ...+.+.+.+++|+.++.++++++...    +.+++|++||.......+..    
T Consensus        81 ~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~----  156 (258)
T PRK09134         81 ASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDF----  156 (258)
T ss_pred             HHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCc----
Confidence                  479999999875431    122345788999999999999988653    33578888874432222211    


Q ss_pred             cccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc--CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCC
Q 021819          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (307)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (307)
                                      ..|+.+|...+.+.+.++++.  ++++++++||.+.++....     ...+.......+     
T Consensus       157 ----------------~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~-----~~~~~~~~~~~~-----  210 (258)
T PRK09134        157 ----------------LSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQS-----PEDFARQHAATP-----  210 (258)
T ss_pred             ----------------hHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccC-----hHHHHHHHhcCC-----
Confidence                            469999999999999887764  4999999999987654211     111222222211     


Q ss_pred             cccCcccHHHHHHHHHHhhcCCCCCceE-EecC
Q 021819          224 HWLGAVPVKDVAKAQVLLFESPAASGRY-LCTN  255 (307)
Q Consensus       224 ~~~~~i~~~dva~~~~~~~~~~~~~g~~-~~~~  255 (307)
                       .....+++|+|++++++++.+...|.+ ...+
T Consensus       211 -~~~~~~~~d~a~~~~~~~~~~~~~g~~~~i~g  242 (258)
T PRK09134        211 -LGRGSTPEEIAAAVRYLLDAPSVTGQMIAVDG  242 (258)
T ss_pred             -CCCCcCHHHHHHHHHHHhcCCCcCCCEEEECC
Confidence             123478999999999999987766754 4443

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.91  E-value=7.4e-23  Score=172.87  Aligned_cols=227  Identities=18%  Similarity=0.167  Sum_probs=156.4

Q ss_pred             cccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC-ccc-ccCCCCCCCceEEEEcccCChhHHHHHhc-
Q 021819            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (307)
Q Consensus         3 ~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~-~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-   79 (307)
                      .|+++++|+++||||+|+||++++++|+++|+ +|++.+|+.+.. +.+ ..+..... ++..+++|++|++++.++++ 
T Consensus         2 ~~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~i~~~~~~   79 (254)
T PRK06114          2 QLFDLDGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGR-RAIQIAADVTSKADLRAAVAR   79 (254)
T ss_pred             CccCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHH
Confidence            35556788999999999999999999999999 899888865331 211 11111112 67889999999998887765 


Q ss_pred             ------CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcc
Q 021819           80 ------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKV  145 (307)
Q Consensus        80 ------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~  145 (307)
                            .+|++|||||.....    ...+++.+.+++|+.++..+++++.    +.+.+++|++||..+..+.+..    
T Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~----  155 (254)
T PRK06114         80 TEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGL----  155 (254)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCC----
Confidence                  369999999975431    2234567889999999988877763    4455789999997765443221    


Q ss_pred             cccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCC
Q 021819          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (307)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (307)
                                    ....|+.+|...+.+.+.++.+   .|+++++++||.+.++.....  .............+    
T Consensus       156 --------------~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~--~~~~~~~~~~~~~p----  215 (254)
T PRK06114        156 --------------LQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP--EMVHQTKLFEEQTP----  215 (254)
T ss_pred             --------------CcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc--cchHHHHHHHhcCC----
Confidence                          0146999999888888877654   489999999999988864321  11111122222111    


Q ss_pred             CcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          223 YHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       223 ~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                        ...+..++|++.++++++...  ...|..+..+++
T Consensus       216 --~~r~~~~~dva~~~~~l~s~~~~~~tG~~i~~dgg  250 (254)
T PRK06114        216 --MQRMAKVDEMVGPAVFLLSDAASFCTGVDLLVDGG  250 (254)
T ss_pred             --CCCCcCHHHHHHHHHHHcCccccCcCCceEEECcC
Confidence              234568999999999988643  234655544444

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=3.4e-23  Score=173.32  Aligned_cols=201  Identities=16%  Similarity=0.111  Sum_probs=149.9

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      .++++++||||+|+||++++++|+++|+ +|++++|++...+... .+.... .++.++++|+++++++.++++      
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYG-VKVVIATADVSDYEEVTAAIEQLKNEL   82 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhC-CeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4567999999999999999999999999 9999999765433221 111111 268889999999999888776      


Q ss_pred             -CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                       ++|+|||++|.....    ...+++.+.+++|+.++.++++++.    +.+.+++|++||..+.++....         
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~---------  153 (239)
T PRK07666         83 GSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVT---------  153 (239)
T ss_pred             CCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCC---------
Confidence             689999999875432    1223457889999999999998885    3456789999997766554332         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                                 ..|+.+|.+.+.+++.++.+   .+++++++|||.+.++......         ...+       ....
T Consensus       154 -----------~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~---------~~~~-------~~~~  206 (239)
T PRK07666        154 -----------SAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLG---------LTDG-------NPDK  206 (239)
T ss_pred             -----------cchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcc---------cccc-------CCCC
Confidence                       56999999998888777644   5899999999999887532110         0000       1234


Q ss_pred             cccHHHHHHHHHHhhcCC
Q 021819          228 AVPVKDVAKAQVLLFESP  245 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~  245 (307)
                      ++.++|+|+++..++.++
T Consensus       207 ~~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        207 VMQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             CCCHHHHHHHHHHHHhCC
Confidence            678999999999999875

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.91  E-value=4.8e-23  Score=174.93  Aligned_cols=225  Identities=20%  Similarity=0.197  Sum_probs=155.9

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      .++++++||||+|+||+++++.|+++|+ +|+++.|+....+....+..... ++.++.+|++|++++.++++       
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~~   81 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGH-RCTAVVADVRDPASVAAAIKRAKEKEG   81 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCC-ceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4468999999999999999999999999 89999887542222222211111 67889999999998888765       


Q ss_pred             CccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCccee-ccCCCCCCcccccCC
Q 021819           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAI-VPNPGWKGKVFDETS  150 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~-~~~~~~~~~~~~E~~  150 (307)
                      .+|+|||+||......    ..+..++.+++|+.++.++++++..    .+.+++|++||..+. .+.+.          
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~----------  151 (263)
T PRK08226         82 RIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPG----------  151 (263)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCC----------
Confidence            5799999999754322    2234467899999999999998753    345689999986542 11111          


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCC-----CcchHHHHHHHHcCCCCCCC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPY-----LNASCAVLQQLLQGSKDTQE  222 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~  222 (307)
                                ...|+.+|...+.+.+.++++.   +++++.++||.+.++.....     .......+..+..+.+    
T Consensus       152 ----------~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p----  217 (263)
T PRK08226        152 ----------ETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIP----  217 (263)
T ss_pred             ----------cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCC----
Confidence                      1469999999999988887654   89999999999988753221     0111222333332221    


Q ss_pred             CcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCccc
Q 021819          223 YHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIYQ  259 (307)
Q Consensus       223 ~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~~  259 (307)
                        ...+.+++|+|+++.+++...  ...|..+..+++.+
T Consensus       218 --~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~dgg~~  254 (263)
T PRK08226        218 --LRRLADPLEVGELAAFLASDESSYLTGTQNVIDGGST  254 (263)
T ss_pred             --CCCCCCHHHHHHHHHHHcCchhcCCcCceEeECCCcc
Confidence              234579999999998887533  44576665555543

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=1.5e-22  Score=169.03  Aligned_cols=215  Identities=15%  Similarity=0.141  Sum_probs=152.5

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCCh-hHHHHHhcCccEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS-GAVSRAVEGCKGVF   85 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~-~~~~~~~~~~d~vi   85 (307)
                      +++|+++||||+|+||+++++.|+++|+ +|++.+|+.....        .. ++..+.+|++++ +.+.+.+..+|+||
T Consensus         3 l~~k~~lVtGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~--------~~-~~~~~~~D~~~~~~~~~~~~~~id~lv   72 (235)
T PRK06550          3 FMTKTVLITGAASGIGLAQARAFLAQGA-QVYGVDKQDKPDL--------SG-NFHFLQLDLSDDLEPLFDWVPSVDILC   72 (235)
T ss_pred             CCCCEEEEcCCCchHHHHHHHHHHHCCC-EEEEEeCCccccc--------CC-cEEEEECChHHHHHHHHHhhCCCCEEE
Confidence            4468999999999999999999999999 8998888653321        11 678899999987 44445556789999


Q ss_pred             EeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcccccCCCCchhh
Q 021819           86 HVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEY  156 (307)
Q Consensus        86 ~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~  156 (307)
                      |+||....     ....+++.+.+++|+.++.++++++..    .+.++||++||..+..+.+..               
T Consensus        73 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~---------------  137 (235)
T PRK06550         73 NTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGG---------------  137 (235)
T ss_pred             ECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCC---------------
Confidence            99986421     222335678899999999999998853    345689999997765443332               


Q ss_pred             hcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHH
Q 021819          157 CKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKD  233 (307)
Q Consensus       157 ~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d  233 (307)
                           ..|+.+|...+.+.+.++.+.   ++++++++||.+.++....... ............      ....+..++|
T Consensus       138 -----~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~  205 (235)
T PRK06550        138 -----AAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFE-PGGLADWVARET------PIKRWAEPEE  205 (235)
T ss_pred             -----cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccC-chHHHHHHhccC------CcCCCCCHHH
Confidence                 569999999888888777654   8999999999998886432211 111212222211      1344778999


Q ss_pred             HHHHHHHhhcCC--CCCceEEecCCcc
Q 021819          234 VAKAQVLLFESP--AASGRYLCTNGIY  258 (307)
Q Consensus       234 va~~~~~~~~~~--~~~g~~~~~~~~~  258 (307)
                      +|+++++++...  ...|..+..+++.
T Consensus       206 ~a~~~~~l~s~~~~~~~g~~~~~~gg~  232 (235)
T PRK06550        206 VAELTLFLASGKADYMQGTIVPIDGGW  232 (235)
T ss_pred             HHHHHHHHcChhhccCCCcEEEECCce
Confidence            999999998643  2346554444444

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.91  E-value=7.4e-23  Score=172.78  Aligned_cols=226  Identities=18%  Similarity=0.165  Sum_probs=156.6

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      |+.+++|+++||||+|+||+++++.|+++|+ +|++.+|+.+..+.+.........++..+.+|++|++++.++++    
T Consensus         4 ~~~~~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (253)
T PRK05867          4 LFDLHGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTA   82 (253)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            3445678999999999999999999999999 89999887654433322111111267888999999998887765    


Q ss_pred             ---CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cC-CcEEEEecCcceeccCCCCCCcccc
Q 021819           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                         .+|++|||||.....    ...+.+.+.+++|+.++..+++++..    .+ .+++|++||..+......       
T Consensus        83 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-------  155 (253)
T PRK05867         83 ELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVP-------  155 (253)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCC-------
Confidence               689999999975432    22345678889999999999998743    22 357999998654221100       


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCc
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (307)
                                 .....|+.+|...+.+.+.++++   .|+++++++||.|.++.....    ...........+      
T Consensus       156 -----------~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~------  214 (253)
T PRK05867        156 -----------QQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPY----TEYQPLWEPKIP------  214 (253)
T ss_pred             -----------CCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccc----hHHHHHHHhcCC------
Confidence                       00146999999999998888765   489999999999988764322    111122222111      


Q ss_pred             ccCcccHHHHHHHHHHhhcCCC--CCceEEecCCcc
Q 021819          225 WLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIY  258 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~~--~~g~~~~~~~~~  258 (307)
                      ...+..++|+|+++++++....  ..|..+..++++
T Consensus       215 ~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgG~  250 (253)
T PRK05867        215 LGRLGRPEELAGLYLYLASEASSYMTGSDIVIDGGY  250 (253)
T ss_pred             CCCCcCHHHHHHHHHHHcCcccCCcCCCeEEECCCc
Confidence            2346799999999999886432  346555554443

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.91  E-value=5.1e-23  Score=175.74  Aligned_cols=197  Identities=19%  Similarity=0.120  Sum_probs=146.2

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------C
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~   80 (307)
                      ++++++||||||+||+++++.|+++|+ +|++.+|+++..+.+.....    ++.++.+|++|++++.++++       +
T Consensus         4 ~~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (273)
T PRK07825          4 RGKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELG----LVVGGPLDVTDPASFAAFLDAVEADLGP   78 (273)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhc----cceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            467999999999999999999999999 89988887655433322111    47788999999998776664       4


Q ss_pred             ccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           81 CKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        81 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      +|++|||||......    ..+...+.+++|+.++.++.+.+    ++.+.++||++||..+..+.+..           
T Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  147 (273)
T PRK07825         79 IDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGM-----------  147 (273)
T ss_pred             CCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCC-----------
Confidence            799999999764321    22345788999999988877766    45567899999997765443332           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcc
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (307)
                               ..|+.+|...+.+.+.++.+   .|+++++++|+.+.++......                  ......++
T Consensus       148 ---------~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~------------------~~~~~~~~  200 (273)
T PRK07825        148 ---------ATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTG------------------GAKGFKNV  200 (273)
T ss_pred             ---------cchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhcccc------------------cccCCCCC
Confidence                     56999998888777666544   4899999999988665422110                  00123468


Q ss_pred             cHHHHHHHHHHhhcCCCC
Q 021819          230 PVKDVAKAQVLLFESPAA  247 (307)
Q Consensus       230 ~~~dva~~~~~~~~~~~~  247 (307)
                      +++|+|+.++.++.++..
T Consensus       201 ~~~~va~~~~~~l~~~~~  218 (273)
T PRK07825        201 EPEDVAAAIVGTVAKPRP  218 (273)
T ss_pred             CHHHHHHHHHHHHhCCCC
Confidence            999999999999987654

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.4e-22  Score=171.84  Aligned_cols=223  Identities=16%  Similarity=0.148  Sum_probs=152.1

Q ss_pred             CccccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-
Q 021819            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (307)
Q Consensus         1 m~~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-   79 (307)
                      |++...+++|+++||||+|+||+++++.|.++|+ +|++++|+.....        .. ++.++++|++|++++.++++ 
T Consensus         1 ~~~~~~~~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~--------~~-~~~~~~~D~~~~~~~~~~~~~   70 (260)
T PRK06523          1 MSFFLELAGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDDL--------PE-GVEFVAADLTTAEGCAAVARA   70 (260)
T ss_pred             CCcCcCCCCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhhc--------CC-ceeEEecCCCCHHHHHHHHHH
Confidence            4544456678999999999999999999999999 8999998754321        01 67889999999988776654 


Q ss_pred             ------CccEEEEeccCCCC------CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCC
Q 021819           80 ------GCKGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKG  143 (307)
Q Consensus        80 ------~~d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~  143 (307)
                            .+|+|||+||....      ....+++...+++|+.++.++.+++    ++.+.+++|++||..+..+.+.   
T Consensus        71 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~---  147 (260)
T PRK06523         71 VLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPE---  147 (260)
T ss_pred             HHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCC---
Confidence                  57999999996421      1233456788999999998887665    4455578999999765332111   


Q ss_pred             cccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCc--------chHHHHHH
Q 021819          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN--------ASCAVLQQ  212 (307)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~--------~~~~~~~~  212 (307)
                                      ....|+.+|...+.+.+.++.+   .++++++++||.|.++.......        ........
T Consensus       148 ----------------~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  211 (260)
T PRK06523        148 ----------------STTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQI  211 (260)
T ss_pred             ----------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHH
Confidence                            0157999999999988887755   48999999999999886321100        00011111


Q ss_pred             HHcCCCCCCCCcccCcccHHHHHHHHHHhhcCC--CCCce-EEecC
Q 021819          213 LLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGR-YLCTN  255 (307)
Q Consensus       213 ~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~-~~~~~  255 (307)
                      +.... ...  ....+..++|+|+++.+++...  ...|. +.+.+
T Consensus       212 ~~~~~-~~~--p~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdg  254 (260)
T PRK06523        212 IMDSL-GGI--PLGRPAEPEEVAELIAFLASDRAASITGTEYVIDG  254 (260)
T ss_pred             HHHHh-ccC--ccCCCCCHHHHHHHHHHHhCcccccccCceEEecC
Confidence            11000 000  1233568999999999998653  33454 44443

>PRK08643 acetoin reductase; Validated

Probab=99.91  E-value=9e-23  Score=172.56  Aligned_cols=223  Identities=19%  Similarity=0.198  Sum_probs=153.5

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------Cc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~~   81 (307)
                      +|+++||||+|+||+++++.|+++|+ +|++++|+.+....+.........++.++++|++|++++.++++       ++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   80 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDL   80 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            47999999999999999999999999 89999987654333222111111267889999999998887765       57


Q ss_pred             cEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHHHh----cC-CcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           82 KGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        82 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      |+||||||......    ..+.+.+.+++|+.++.++++.+.+    .+ .+++|++||..+.++.+..           
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-----------  149 (256)
T PRK08643         81 NVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPEL-----------  149 (256)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCC-----------
Confidence            99999998754321    1234578899999999888877743    22 3689999997765554332           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCc-------chHHH-HHHHHcCCCCCC
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN-------ASCAV-LQQLLQGSKDTQ  221 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~-------~~~~~-~~~~~~~~~~~~  221 (307)
                               ..|+.+|...+.+.+.++.+   .|+++++++||.+.++.......       ....+ ........    
T Consensus       150 ---------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  216 (256)
T PRK08643        150 ---------AVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDI----  216 (256)
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccC----
Confidence                     56999999999888877754   48999999999998875321100       00000 01111110    


Q ss_pred             CCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCcc
Q 021819          222 EYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIY  258 (307)
Q Consensus       222 ~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~  258 (307)
                        ....+.+++|+|.++.+++...  ...|..+..+++.
T Consensus       217 --~~~~~~~~~~va~~~~~L~~~~~~~~~G~~i~vdgg~  253 (256)
T PRK08643        217 --TLGRLSEPEDVANCVSFLAGPDSDYITGQTIIVDGGM  253 (256)
T ss_pred             --CCCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCCe
Confidence              1224568999999999888643  3457665555443

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.91  E-value=4.8e-23  Score=161.32  Aligned_cols=238  Identities=20%  Similarity=0.207  Sum_probs=178.8

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCC--CeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNY--TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGV   84 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~v   84 (307)
                      |++|+|||++|.+|++|.+.+.++|.  .+.+..                     ..-.+|+++.++.+.+++  +...|
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~---------------------~skd~DLt~~a~t~~lF~~ekPthV   59 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFI---------------------GSKDADLTNLADTRALFESEKPTHV   59 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEe---------------------ccccccccchHHHHHHHhccCCcee
Confidence            46999999999999999999999876  111111                     011379999999999986  67999


Q ss_pred             EEeccCCCC-CCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCcc
Q 021819           85 FHVASPCTL-EDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (307)
Q Consensus        85 i~~a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (307)
                      ||+|+.... -.......+.+..|+...-|++..|-++|++++++..|++ +++....  .|++|.-......-++ .-+
T Consensus        60 IhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStC-IfPdkt~--yPIdEtmvh~gpphps-N~g  135 (315)
T KOG1431|consen   60 IHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTC-IFPDKTS--YPIDETMVHNGPPHPS-NFG  135 (315)
T ss_pred             eehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhccee-ecCCCCC--CCCCHHHhccCCCCCC-chH
Confidence            999986543 1123345788899999999999999999999999988855 5665543  7888865432211111 136


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC---CcchHHHHHHHHc----CC-CCCC---CCcccCcccHH
Q 021819          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQ----GS-KDTQ---EYHWLGAVPVK  232 (307)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~---~~~~~~~~~~~~~----~~-~~~~---~~~~~~~i~~~  232 (307)
                      |+.+|.++.-.-+.|..++|.+++.+-|.++|||.+...   ...++.++.++..    +. ++..   +...+.|+|.+
T Consensus       136 YsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~  215 (315)
T KOG1431|consen  136 YSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSD  215 (315)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHh
Confidence            999999998777888889999999999999999988654   4566667665543    22 1221   34688999999


Q ss_pred             HHHHHHHHhhcCCCCC-ceEEecCC--cccHHHHHHHHHHhC
Q 021819          233 DVAKAQVLLFESPAAS-GRYLCTNG--IYQFGDFAERVSKLF  271 (307)
Q Consensus       233 dva~~~~~~~~~~~~~-g~~~~~~~--~~~~~~~~~~~~~~~  271 (307)
                      |+|+++++++.+-..- .+.+.+++  .++++|+++.+.|+.
T Consensus       216 DLA~l~i~vlr~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~  257 (315)
T KOG1431|consen  216 DLADLFIWVLREYEGVEPIILSVGESDEVTIREAAEAVVEAV  257 (315)
T ss_pred             HHHHHHHHHHHhhcCccceEeccCccceeEHHHHHHHHHHHh
Confidence            9999999999865433 34455565  699999999999998

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.4e-22  Score=174.27  Aligned_cols=216  Identities=15%  Similarity=0.127  Sum_probs=154.3

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC-CcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      .++|+++||||+|+||++++++|+++|+ +|+++.|+... .+...........++.++.+|++|.+++.++++      
T Consensus        44 ~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~  122 (290)
T PRK06701         44 LKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL  122 (290)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4468999999999999999999999999 89888886432 111111111111157889999999998887775      


Q ss_pred             -CccEEEEeccCCCCC-----CCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 -GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                       ++|+|||+||.....     ...+.+.+.+++|+.++.++++++.+.  ..+++|++||..++.+.+..          
T Consensus       123 ~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~~----------  192 (290)
T PRK06701        123 GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETL----------  192 (290)
T ss_pred             CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCCc----------
Confidence             579999999975321     122345788999999999999998653  23689999997765443332          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (307)
                                ..|+.+|.+.+.+.+.++.+.   |+++++++||.++++......  ............      ....+
T Consensus       193 ----------~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~--~~~~~~~~~~~~------~~~~~  254 (290)
T PRK06701        193 ----------IDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDF--DEEKVSQFGSNT------PMQRP  254 (290)
T ss_pred             ----------chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccccc--CHHHHHHHHhcC------CcCCC
Confidence                      469999999999988887764   899999999999998643321  112222222211      23457


Q ss_pred             ccHHHHHHHHHHhhcCCC--CCceE
Q 021819          229 VPVKDVAKAQVLLFESPA--ASGRY  251 (307)
Q Consensus       229 i~~~dva~~~~~~~~~~~--~~g~~  251 (307)
                      .+++|+|+++++++....  ..|.+
T Consensus       255 ~~~~dva~~~~~ll~~~~~~~~G~~  279 (290)
T PRK06701        255 GQPEELAPAYVFLASPDSSYITGQM  279 (290)
T ss_pred             cCHHHHHHHHHHHcCcccCCccCcE
Confidence            899999999999887643  34643

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.5e-22  Score=171.84  Aligned_cols=211  Identities=16%  Similarity=0.090  Sum_probs=151.2

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      .++++++||||+|+||++++++|+++|+ +|++++|+++..+.+.........++.++.+|+++++++.++++       
T Consensus         8 ~~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (263)
T PRK07814          8 LDDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFG   86 (263)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4578999999999999999999999999 99999997654332221111111268889999999998877665       


Q ss_pred             CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh-----cCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR-----FGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                      ++|+|||+||.....    ...+.+...+++|+.++.++.+++.+     .+.+++|++||..+..+.++.         
T Consensus        87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~---------  157 (263)
T PRK07814         87 RLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGF---------  157 (263)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCC---------
Confidence            579999999864331    12244678899999999999999964     345789999997665443332         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHhc--CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCc
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (307)
                                 ..|+.+|...+.+.+.++.+.  +++++.++||.+.++....... ...+........      ....+
T Consensus       158 -----------~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~------~~~~~  219 (263)
T PRK07814        158 -----------AAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAA-NDELRAPMEKAT------PLRRL  219 (263)
T ss_pred             -----------chhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccC-CHHHHHHHHhcC------CCCCC
Confidence                       579999999999998887763  6899999999998764321100 112222221111      12335


Q ss_pred             ccHHHHHHHHHHhhcCC
Q 021819          229 VPVKDVAKAQVLLFESP  245 (307)
Q Consensus       229 i~~~dva~~~~~~~~~~  245 (307)
                      ..++|+|+++++++...
T Consensus       220 ~~~~~va~~~~~l~~~~  236 (263)
T PRK07814        220 GDPEDIAAAAVYLASPA  236 (263)
T ss_pred             cCHHHHHHHHHHHcCcc
Confidence            68999999999988653

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.91  E-value=2e-22  Score=169.98  Aligned_cols=221  Identities=14%  Similarity=0.109  Sum_probs=154.9

Q ss_pred             cCCcEEEEeCCc--hhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            7 KEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         7 ~~~~~ilItGat--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      +++|+++||||+  ++||++++++|+++|+ +|++.+|+....+.++++..   .++..+++|++|+++++++++     
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~~~   80 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVD---EEDLLVECDVASDESIERAFATIKER   80 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhcc---CceeEEeCCCCCHHHHHHHHHHHHHH
Confidence            457899999999  7999999999999999 89888886322222222221   157889999999988887664     


Q ss_pred             --CccEEEEeccCCCC--------CCCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcccc
Q 021819           80 --GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        80 --~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                        .+|++|||||....        +...+++...+++|+.++..+.+++...  ..+++|++||.++..+.+..      
T Consensus        81 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~~~------  154 (252)
T PRK06079         81 VGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPNY------  154 (252)
T ss_pred             hCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCCcc------
Confidence              47999999997532        1233456888999999999998888653  12689999986654332221      


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCc
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (307)
                                    ..|+.+|...+.+.+.++.+   .|+++++|.||.|.++....... .....+......+      
T Consensus       155 --------------~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~-~~~~~~~~~~~~p------  213 (252)
T PRK06079        155 --------------NVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKG-HKDLLKESDSRTV------  213 (252)
T ss_pred             --------------hhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCC-hHHHHHHHHhcCc------
Confidence                          56999999999888877765   48999999999998875322111 1122222222111      


Q ss_pred             ccCcccHHHHHHHHHHhhcCC--CCCceEEecCCcc
Q 021819          225 WLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIY  258 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~  258 (307)
                      ...+..++|+|+++.+++...  ...|..+..++++
T Consensus       214 ~~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg~  249 (252)
T PRK06079        214 DGVGVTIEEVGNTAAFLLSDLSTGVTGDIIYVDKGV  249 (252)
T ss_pred             ccCCCCHHHHHHHHHHHhCcccccccccEEEeCCce
Confidence            234678999999999988653  3446665555443

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.91  E-value=1.1e-22  Score=171.22  Aligned_cols=205  Identities=18%  Similarity=0.167  Sum_probs=146.7

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------Ccc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GCK   82 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~~d   82 (307)
                      |+++||||+|+||+++++.|+++|+ +|++++|++++.+.+.....   .++.++.+|++|.+++.++++       ++|
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id   76 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELG---DNLYIAQLDVRNRAAIEEMLASLPAEWRNID   76 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhc---cceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            4799999999999999999999999 89999997655443322111   167889999999988877765       689


Q ss_pred             EEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCCCc
Q 021819           83 GVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (307)
Q Consensus        83 ~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~  153 (307)
                      +|||+||....     ....+++.+.+++|+.++.++++++    .+.+.+++|++||..+..+....            
T Consensus        77 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~------------  144 (248)
T PRK10538         77 VLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGG------------  144 (248)
T ss_pred             EEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCC------------
Confidence            99999986421     1223455788999999976666665    45567899999997654332221            


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCC-CcchHHHHHHHHcCCCCCCCCcccCcc
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY-LNASCAVLQQLLQGSKDTQEYHWLGAV  229 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (307)
                              ..|+.+|...+.+.+.++.+   .++++++++||.+.|+..... ............         ....++
T Consensus       145 --------~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  207 (248)
T PRK10538        145 --------NVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTY---------QNTVAL  207 (248)
T ss_pred             --------chhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhhc---------cccCCC
Confidence                    57999999999998888765   379999999999986643211 000000111111         112457


Q ss_pred             cHHHHHHHHHHhhcCCCC
Q 021819          230 PVKDVAKAQVLLFESPAA  247 (307)
Q Consensus       230 ~~~dva~~~~~~~~~~~~  247 (307)
                      .++|+|+++++++..+..
T Consensus       208 ~~~dvA~~~~~l~~~~~~  225 (248)
T PRK10538        208 TPEDVSEAVWWVATLPAH  225 (248)
T ss_pred             CHHHHHHHHHHHhcCCCc
Confidence            999999999999976643

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.91  E-value=9.6e-23  Score=170.71  Aligned_cols=194  Identities=20%  Similarity=0.172  Sum_probs=147.6

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcC----ccEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG----CKGV   84 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~----~d~v   84 (307)
                      |++++||||+|+||++++++|+++|+ +|++++|+++..+.+...   .. ++.++++|++|++++.+++++    .|.+
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~~~~~~~~~~~d~~   75 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQ---SA-NIFTLAFDVTDHPGTKAALSQLPFIPELW   75 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHh---cC-CCeEEEeeCCCHHHHHHHHHhcccCCCEE
Confidence            46899999999999999999999999 899999976544333221   11 578899999999999998874    5899


Q ss_pred             EEeccCCCC-C---CCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcccccCCCCchhhhc
Q 021819           85 FHVASPCTL-E---DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK  158 (307)
Q Consensus        85 i~~a~~~~~-~---~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~  158 (307)
                      ||+||.... .   ...+.+.+.+++|+.++.++++++...  +.+++|++||..+.++.+..                 
T Consensus        76 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~-----------------  138 (240)
T PRK06101         76 IFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPRA-----------------  138 (240)
T ss_pred             EEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCCC-----------------
Confidence            999986432 1   122335688999999999999998763  23679999997765544332                 


Q ss_pred             ccCccHHHHHHHHHHHHHHHHH---hcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHH
Q 021819          159 SRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVA  235 (307)
Q Consensus       159 ~~~~~y~~sK~~~e~~~~~~~~---~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva  235 (307)
                         ..|+.+|...+.+.+.++.   ..++++++++||.++++......               .    .....++++|+|
T Consensus       139 ---~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~---------------~----~~~~~~~~~~~a  196 (240)
T PRK06101        139 ---EAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNT---------------F----AMPMIITVEQAS  196 (240)
T ss_pred             ---chhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCC---------------C----CCCcccCHHHHH
Confidence               5799999999999887763   45999999999999987643210               0    001246999999


Q ss_pred             HHHHHhhcCCC
Q 021819          236 KAQVLLFESPA  246 (307)
Q Consensus       236 ~~~~~~~~~~~  246 (307)
                      +.++..++.+.
T Consensus       197 ~~i~~~i~~~~  207 (240)
T PRK06101        197 QEIRAQLARGK  207 (240)
T ss_pred             HHHHHHHhcCC
Confidence            99999998753

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1e-22  Score=173.65  Aligned_cols=205  Identities=16%  Similarity=0.164  Sum_probs=148.0

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc-------Cc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~~   81 (307)
                      |+++||||+|+||+++++.|+++|+ +|++.+|+.+..+.... +..... ++.++++|++|++++.++++       .+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   78 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGG-DGFYQRCDVRDYSQLTALAQACEEKWGGI   78 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4799999999999999999999999 89999887655433221 111122 67889999999988887765       58


Q ss_pred             cEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCCCc
Q 021819           82 KGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (307)
Q Consensus        82 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~  153 (307)
                      |+|||+||......    ..+.+...+++|+.++.++++.+    ++.+.+++|++||..+..+.+..            
T Consensus        79 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~------------  146 (270)
T PRK05650         79 DVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAM------------  146 (270)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCc------------
Confidence            99999999765321    12344667899998888877664    55667899999997665443332            


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcch---HHHHHHHHcCCCCCCCCcccC
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNAS---CAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  227 (307)
                              ..|+.+|...+.+.+.++.+   .++++++++|+.+.++.........   .........          ..
T Consensus       147 --------~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~----------~~  208 (270)
T PRK05650        147 --------SSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLE----------KS  208 (270)
T ss_pred             --------hHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhh----------cC
Confidence                    56999999988888777765   4899999999999887654321111   111111111          23


Q ss_pred             cccHHHHHHHHHHhhcCCC
Q 021819          228 AVPVKDVAKAQVLLFESPA  246 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~~  246 (307)
                      +++++|+|+.++..++++.
T Consensus       209 ~~~~~~vA~~i~~~l~~~~  227 (270)
T PRK05650        209 PITAADIADYIYQQVAKGE  227 (270)
T ss_pred             CCCHHHHHHHHHHHHhCCC
Confidence            5799999999999998643

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.91  E-value=1.8e-22  Score=171.70  Aligned_cols=222  Identities=20%  Similarity=0.198  Sum_probs=155.0

Q ss_pred             CccccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-
Q 021819            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (307)
Q Consensus         1 m~~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-   79 (307)
                      |.+.+.+++|+++||||+|+||+++++.|+++|+ +|++.+|+......        . ++.++++|++|+++++++++ 
T Consensus         1 ~~~~~~l~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~--------~-~~~~~~~D~~~~~~~~~~~~~   70 (266)
T PRK06171          1 MQDWLNLQGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH--------E-NYQFVPTDVSSAEEVNHTVAE   70 (266)
T ss_pred             CcccccCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc--------C-ceEEEEccCCCHHHHHHHHHH
Confidence            6666667789999999999999999999999999 89888886544321        1 67889999999998887765 


Q ss_pred             ------CccEEEEeccCCCCC-------------CCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceec
Q 021819           80 ------GCKGVFHVASPCTLE-------------DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIV  136 (307)
Q Consensus        80 ------~~d~vi~~a~~~~~~-------------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~  136 (307)
                            .+|+|||+||.....             ...+++...+++|+.++.++++++.+    .+.++||++||..+..
T Consensus        71 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  150 (266)
T PRK06171         71 IIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLE  150 (266)
T ss_pred             HHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccC
Confidence                  479999999964321             12334577899999999999988864    3446899999977654


Q ss_pred             cCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCcee-CCCCCCCC-c-------
Q 021819          137 PNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCL-GPLMQPYL-N-------  204 (307)
Q Consensus       137 ~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~-g~~~~~~~-~-------  204 (307)
                      +.+..                    ..|+.+|...+.+++.++.+   .|+++++++||.+. ++...... .       
T Consensus       151 ~~~~~--------------------~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~  210 (266)
T PRK06171        151 GSEGQ--------------------SCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRG  210 (266)
T ss_pred             CCCCC--------------------chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccC
Confidence            43332                    57999999999998887765   48999999999885 33211100 0       


Q ss_pred             -chHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCCC--CCceEEecCC
Q 021819          205 -ASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNG  256 (307)
Q Consensus       205 -~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~--~~g~~~~~~~  256 (307)
                       ........+......    ....+..++|+|.++.+++....  ..|..+..++
T Consensus       211 ~~~~~~~~~~~~~~~~----p~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdg  261 (266)
T PRK06171        211 ITVEQLRAGYTKTSTI----PLGRSGKLSEVADLVCYLLSDRASYITGVTTNIAG  261 (266)
T ss_pred             CCHHHHHhhhcccccc----cCCCCCCHHHhhhheeeeeccccccceeeEEEecC
Confidence             001111111110000    12346789999999998886433  3465444443

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.91  E-value=1.5e-22  Score=171.42  Aligned_cols=223  Identities=19%  Similarity=0.172  Sum_probs=155.9

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +++|+++||||+|+||+++++.|+++|+ +|+.++|+.+..+...........++.++++|++|++++.++++       
T Consensus        10 ~~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~   88 (259)
T PRK08213         10 LSGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFG   88 (259)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4568999999999999999999999999 89999987654332221111111157789999999998876664       


Q ss_pred             CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHhc-----CCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRF-----GVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                      .+|+|||+||....    ....+.+.+.+++|+.++.++++++.+.     +.++||++||....++.+..         
T Consensus        89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~---------  159 (259)
T PRK08213         89 HVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE---------  159 (259)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc---------
Confidence            47999999986432    1222345678899999999999987554     56799999997665443221         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                             ......|+.+|...+.+++.++++   .++++++++|+.+.++.....   ...+........+      ...
T Consensus       160 -------~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~---~~~~~~~~~~~~~------~~~  223 (259)
T PRK08213        160 -------VMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGT---LERLGEDLLAHTP------LGR  223 (259)
T ss_pred             -------ccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhh---hHHHHHHHHhcCC------CCC
Confidence                   001156999999999999988775   379999999999877654322   2233333333222      223


Q ss_pred             cccHHHHHHHHHHhhcCC--CCCceEEecC
Q 021819          228 AVPVKDVAKAQVLLFESP--AASGRYLCTN  255 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~--~~~g~~~~~~  255 (307)
                      +..++|++..+.+++...  ...|..+..+
T Consensus       224 ~~~~~~va~~~~~l~~~~~~~~~G~~~~~~  253 (259)
T PRK08213        224 LGDDEDLKGAALLLASDASKHITGQILAVD  253 (259)
T ss_pred             CcCHHHHHHHHHHHhCccccCccCCEEEEC
Confidence            457899999988888643  2346554443

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.91  E-value=4.4e-23  Score=174.52  Aligned_cols=215  Identities=20%  Similarity=0.181  Sum_probs=145.1

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-CccEEEEe
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-GCKGVFHV   87 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-~~d~vi~~   87 (307)
                      +++++||||+|+||++++++|+++|+ +|+++.|+.+....+.........++.++.+|++|++++.+++. ++|+||||
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~   80 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNN   80 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEEC
Confidence            46899999999999999999999999 89999987544332221111111157889999999999988887 89999999


Q ss_pred             ccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcc
Q 021819           88 ASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKS  159 (307)
Q Consensus        88 a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~  159 (307)
                      ||.....    ...+.....+++|+.++.++.+.+    ++.+.++||++||..+..+.+..                  
T Consensus        81 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~------------------  142 (257)
T PRK09291         81 AGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFT------------------  142 (257)
T ss_pred             CCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCc------------------
Confidence            9975432    122345678889999887776654    45566899999997654332221                  


Q ss_pred             cCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC--CCcccCcccHHHH
Q 021819          160 RKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ--EYHWLGAVPVKDV  234 (307)
Q Consensus       160 ~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~dv  234 (307)
                        ..|+.+|...|.+.+.++.+   .|++++++|||.+..+...........+...  .......  .....+.++++|+
T Consensus       143 --~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  218 (257)
T PRK09291        143 --GAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDP--ARNFTDPEDLAFPLEQFDPQEM  218 (257)
T ss_pred             --chhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcch--hhHHHhhhhhhccccCCCHHHH
Confidence              57999999999988776544   5999999999988654322110000000000  0000000  1123345788999


Q ss_pred             HHHHHHhhcCCC
Q 021819          235 AKAQVLLFESPA  246 (307)
Q Consensus       235 a~~~~~~~~~~~  246 (307)
                      ++.++.++..+.
T Consensus       219 ~~~~~~~l~~~~  230 (257)
T PRK09291        219 IDAMVEVIPADT  230 (257)
T ss_pred             HHHHHHHhcCCC
Confidence            998888886544

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=1.7e-22  Score=170.53  Aligned_cols=214  Identities=17%  Similarity=0.134  Sum_probs=148.7

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCC-CCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcC-----
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP-GSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG-----   80 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----   80 (307)
                      +++|+++||||+|+||+++++.|+++|+ +|+...++ ....+.+....  . .++.++++|++|++++.+++++     
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~-~vv~~~~~~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGA-RVVVNYHQSEDAAEALADEL--G-DRAIALQADVTDREQVQAMFATATEHF   78 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHh--C-CceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            4467999999999999999999999999 77765543 32222221111  1 1678899999999988877753     


Q ss_pred             ---ccEEEEeccCCCC----------CCCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCC
Q 021819           81 ---CKGVFHVASPCTL----------EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKG  143 (307)
Q Consensus        81 ---~d~vi~~a~~~~~----------~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~  143 (307)
                         +|++||+||....          ....+++.+.+++|+.++.++++++.    +.+.+++|++||.....+...   
T Consensus        79 g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~---  155 (253)
T PRK08642         79 GKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVP---  155 (253)
T ss_pred             CCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCC---
Confidence               8999999986311          11223457789999999999999985    345578999998543211111   


Q ss_pred             cccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCC
Q 021819          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT  220 (307)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  220 (307)
                                       ...|+.+|.+.+.+++.++++   .+++++.++||.+.++......  ............+  
T Consensus       156 -----------------~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~--~~~~~~~~~~~~~--  214 (253)
T PRK08642        156 -----------------YHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAAT--PDEVFDLIAATTP--  214 (253)
T ss_pred             -----------------ccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccC--CHHHHHHHHhcCC--
Confidence                             157999999999999998876   4799999999999876432211  1122222222211  


Q ss_pred             CCCcccCcccHHHHHHHHHHhhcCC--CCCceEE
Q 021819          221 QEYHWLGAVPVKDVAKAQVLLFESP--AASGRYL  252 (307)
Q Consensus       221 ~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~  252 (307)
                          ...+.+++|+|+++.+++...  ...|..+
T Consensus       215 ----~~~~~~~~~va~~~~~l~~~~~~~~~G~~~  244 (253)
T PRK08642        215 ----LRKVTTPQEFADAVLFFASPWARAVTGQNL  244 (253)
T ss_pred             ----cCCCCCHHHHHHHHHHHcCchhcCccCCEE
Confidence                245789999999999999743  3446533

>PRK09186 flagellin modification protein A; Provisional

Probab=99.91  E-value=1e-22  Score=172.15  Aligned_cols=226  Identities=19%  Similarity=0.201  Sum_probs=151.9

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCC-CCCceEEEEcccCChhHHHHHhcC-----
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGA-GDANLRVFEADVLDSGAVSRAVEG-----   80 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~i~~D~~d~~~~~~~~~~-----   80 (307)
                      ++|+++||||+|+||+++++.|+++|+ +|+++.|+++..+.+.. +... ....+.++++|++|++++.+++++     
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999999 89999887655432211 1110 111466779999999998888763     


Q ss_pred             --ccEEEEeccCCCC-------CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccc
Q 021819           81 --CKGVFHVASPCTL-------EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        81 --~d~vi~~a~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                        +|+|||||+....       +...+.+...+++|+.++..+++++    ++.+.++||++||..+.+....    ...
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----~~~  157 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKF----EIY  157 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccc----hhc
Confidence              7999999975321       1222345778888988887766665    4456679999999765443111    111


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCc
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (307)
                      |+.+...      ...|+.+|...+.+.+.++.+   .++++++++||.++++..       ..+........      .
T Consensus       158 ~~~~~~~------~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~-------~~~~~~~~~~~------~  218 (256)
T PRK09186        158 EGTSMTS------PVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP-------EAFLNAYKKCC------N  218 (256)
T ss_pred             cccccCC------cchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC-------HHHHHHHHhcC------C
Confidence            2221111      135999999999998877665   489999999998876531       11222222111      1


Q ss_pred             ccCcccHHHHHHHHHHhhcCCC--CCceEEecCCc
Q 021819          225 WLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGI  257 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~~--~~g~~~~~~~~  257 (307)
                      ...+++++|+|+++++++....  ..|.++..+++
T Consensus       219 ~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g  253 (256)
T PRK09186        219 GKGMLDPDDICGTLVFLLSDQSKYITGQNIIVDDG  253 (256)
T ss_pred             ccCCCCHHHhhhhHhheeccccccccCceEEecCC
Confidence            2357899999999999997543  34666554443

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.91  E-value=6.6e-23  Score=171.81  Aligned_cols=205  Identities=18%  Similarity=0.179  Sum_probs=148.5

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      .+||+++||||+|+||+.+++.|+++|+ +|++++|+++....+.........++.++.+|++|.+++.++++       
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFG   82 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4578999999999999999999999999 89999997654333221111111268889999999998877765       


Q ss_pred             CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                      ++|+|||+||.....    ...+.+...+.+|+.++.++++.+    .+.+.+++|++||.....+.+..          
T Consensus        83 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~----------  152 (241)
T PRK07454         83 CPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQW----------  152 (241)
T ss_pred             CCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCc----------
Confidence            479999999975431    122345788999999998888776    34456789999997654332221          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (307)
                                ..|+.+|...+.+.+.++++   .+++++++|||.+.++......  ..    .         ......+
T Consensus       153 ----------~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~--~~----~---------~~~~~~~  207 (241)
T PRK07454        153 ----------GAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTET--VQ----A---------DFDRSAM  207 (241)
T ss_pred             ----------cHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccccc--cc----c---------ccccccC
Confidence                      56999999999888776543   4899999999999877532110  00    0         0011235


Q ss_pred             ccHHHHHHHHHHhhcCCCC
Q 021819          229 VPVKDVAKAQVLLFESPAA  247 (307)
Q Consensus       229 i~~~dva~~~~~~~~~~~~  247 (307)
                      ++++|+|+++++++.++..
T Consensus       208 ~~~~~va~~~~~l~~~~~~  226 (241)
T PRK07454        208 LSPEQVAQTILHLAQLPPS  226 (241)
T ss_pred             CCHHHHHHHHHHHHcCCcc
Confidence            7999999999999987743

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.3e-22  Score=171.17  Aligned_cols=220  Identities=15%  Similarity=0.182  Sum_probs=148.1

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEe-CCCCCCccc-ccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATV-FPGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~-r~~~~~~~~-~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ++|+++||||+|+||+++++.|+++|+ +|++.. |+.+..+.. ..+..... .+..+.+|+++.+++..+++      
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGG-SAFSIGANLESLHGVEALYSSLDNEL   80 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHHhcCC-ceEEEecccCCHHHHHHHHHHHHHHh
Confidence            367999999999999999999999999 787764 333322211 11111112 56788899999876654332      


Q ss_pred             -------CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCccc
Q 021819           80 -------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVF  146 (307)
Q Consensus        80 -------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~  146 (307)
                             .+|++|||||.....    ...+.+...+++|+.++..+++++.+.  ..++||++||..+..+.+..     
T Consensus        81 ~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----  155 (252)
T PRK12747         81 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDF-----  155 (252)
T ss_pred             hhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCCc-----
Confidence                   589999999965321    122345788899999999999988653  23589999997764433322     


Q ss_pred             ccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCC
Q 021819          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (307)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (307)
                                     ..|+.+|...+.+.+.++.+   .++++++++||.|.++........  ..........     .
T Consensus       156 ---------------~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~-----~  213 (252)
T PRK12747        156 ---------------IAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSD--PMMKQYATTI-----S  213 (252)
T ss_pred             ---------------hhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccC--HHHHHHHHhc-----C
Confidence                           57999999999998887765   489999999999998864321110  1111111110     0


Q ss_pred             cccCcccHHHHHHHHHHhhcCCC--CCceEEecCC
Q 021819          224 HWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNG  256 (307)
Q Consensus       224 ~~~~~i~~~dva~~~~~~~~~~~--~~g~~~~~~~  256 (307)
                      ....+.+++|+|+++.+++....  ..|..+..++
T Consensus       214 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdg  248 (252)
T PRK12747        214 AFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSG  248 (252)
T ss_pred             cccCCCCHHHHHHHHHHHcCccccCcCCcEEEecC
Confidence            12346799999999988876432  3465443333

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.91  E-value=8.1e-23  Score=173.40  Aligned_cols=224  Identities=13%  Similarity=0.090  Sum_probs=152.9

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      +++|+++||||+|+||+++++.|+++|+ +|++.+|+....+.+.. +......++.++++|++|+++++++++      
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g   84 (263)
T PRK08339          6 LSGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIG   84 (263)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhC
Confidence            4578999999999999999999999999 89999987554332221 111111268899999999998888775      


Q ss_pred             CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                      .+|++|||||....    +...+++.+.+++|+.++..+.+++    ++.+.+++|++||..+..+.+..          
T Consensus        85 ~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~----------  154 (263)
T PRK08339         85 EPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNI----------  154 (263)
T ss_pred             CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcc----------
Confidence            47999999997543    2234567889999988877766655    45556799999997654333322          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCC-------c-chHHHHHHHHcCCCCC
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL-------N-ASCAVLQQLLQGSKDT  220 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~-------~-~~~~~~~~~~~~~~~~  220 (307)
                                ..|+.+|...+.+.+.++.+   .|+++++|.||.|.++......       . .............   
T Consensus       155 ----------~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  221 (263)
T PRK08339        155 ----------ALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPI---  221 (263)
T ss_pred             ----------hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccC---
Confidence                      45888888888887777665   4899999999999776421100       0 0011111111111   


Q ss_pred             CCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          221 QEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       221 ~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                         ....+..++|+|.++.+++...  ...|..+..+++
T Consensus       222 ---p~~r~~~p~dva~~v~fL~s~~~~~itG~~~~vdgG  257 (263)
T PRK08339        222 ---PLGRLGEPEEIGYLVAFLASDLGSYINGAMIPVDGG  257 (263)
T ss_pred             ---CcccCcCHHHHHHHHHHHhcchhcCccCceEEECCC
Confidence               1234678999999999988643  345665555444

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.90  E-value=1.9e-22  Score=171.51  Aligned_cols=219  Identities=16%  Similarity=0.092  Sum_probs=155.5

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      .++|+++||||+|+||++++++|+++|+ +|+++.|+.+..+.... +..... ++.++++|++|+++++++++      
T Consensus         8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (265)
T PRK07097          8 LKGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGI-EAHGYVCDVTDEDGVQAMVSQIEKEV   85 (265)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            3568999999999999999999999999 88888887654332221 111111 68889999999999888775      


Q ss_pred             -CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 -GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                       .+|+||||||....    ....+.+.+.+++|+.++..+++++..    .+.++||++||..+.++.+..         
T Consensus        86 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  156 (265)
T PRK07097         86 GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETV---------  156 (265)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCC---------
Confidence             37999999997653    223345678899999999988887743    456799999997665443332         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCc-----chHHHHHHHHcCCCCCCC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLN-----ASCAVLQQLLQGSKDTQE  222 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~  222 (307)
                                 ..|+.+|...+.+.+.++++.   |++++.|+||.+.++.......     ....+........     
T Consensus       157 -----------~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-----  220 (265)
T PRK07097        157 -----------SAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKT-----  220 (265)
T ss_pred             -----------ccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcC-----
Confidence                       579999999999998887764   8999999999999885432110     0011111111111     


Q ss_pred             CcccCcccHHHHHHHHHHhhcCC--CCCceEEe
Q 021819          223 YHWLGAVPVKDVAKAQVLLFESP--AASGRYLC  253 (307)
Q Consensus       223 ~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~  253 (307)
                       ....+..++|+|..+.+++...  ...|..+.
T Consensus       221 -~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~  252 (265)
T PRK07097        221 -PAARWGDPEDLAGPAVFLASDASNFVNGHILY  252 (265)
T ss_pred             -CccCCcCHHHHHHHHHHHhCcccCCCCCCEEE
Confidence             1234678999999999998753  34565433

>PRK12742 oxidoreductase; Provisional

Probab=99.90  E-value=2.6e-22  Score=167.75  Aligned_cols=216  Identities=16%  Similarity=0.132  Sum_probs=149.7

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC-CCCcccccCCCCCCCceEEEEcccCChhHHHHHhc---Cc
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GC   81 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~---~~   81 (307)
                      .+++|+|+||||+|+||++++++|+++|+ +|++..++. +..+.+....     ++..+.+|++|.+++.+.++   ++
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~i   76 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQET-----GATAVQTDSADRDAVIDVVRKSGAL   76 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHh-----CCeEEecCCCCHHHHHHHHHHhCCC
Confidence            34578999999999999999999999999 787766532 2222221110     45678899999988877765   48


Q ss_pred             cEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceec-cCCCCCCcccccCCCCch
Q 021819           82 KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIV-PNPGWKGKVFDETSWTDL  154 (307)
Q Consensus        82 d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~-~~~~~~~~~~~E~~~~~~  154 (307)
                      |++||+||.....    ...+++.+.+++|+.++.++++.+.+.  ..+++|++||..+.. +.+.              
T Consensus        77 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------  142 (237)
T PRK12742         77 DILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMPVAG--------------  142 (237)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCCCCC--------------
Confidence            9999999975432    223456889999999999998777554  346899999965421 1111              


Q ss_pred             hhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccH
Q 021819          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPV  231 (307)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  231 (307)
                            ...|+.+|...+.+++.++.+   .++++++++||.+.++......    ..........      ....+.++
T Consensus       143 ------~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~----~~~~~~~~~~------~~~~~~~p  206 (237)
T PRK12742        143 ------MAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANG----PMKDMMHSFM------AIKRHGRP  206 (237)
T ss_pred             ------CcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcccccc----HHHHHHHhcC------CCCCCCCH
Confidence                  157999999999999877665   4799999999999887643221    1111111111      12346789


Q ss_pred             HHHHHHHHHhhcCCC--CCceEEecCCc
Q 021819          232 KDVAKAQVLLFESPA--ASGRYLCTNGI  257 (307)
Q Consensus       232 ~dva~~~~~~~~~~~--~~g~~~~~~~~  257 (307)
                      +|+++++.+++....  ..|..+..+++
T Consensus       207 ~~~a~~~~~l~s~~~~~~~G~~~~~dgg  234 (237)
T PRK12742        207 EEVAGMVAWLAGPEASFVTGAMHTIDGA  234 (237)
T ss_pred             HHHHHHHHHHcCcccCcccCCEEEeCCC
Confidence            999999998886533  34665544443

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.90  E-value=1.8e-22  Score=171.02  Aligned_cols=225  Identities=15%  Similarity=0.118  Sum_probs=152.4

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCC-CCCceEEEEcccCChhHHHHHhc-------
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGA-GDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +|+|+||||+|+||+++++.|+++|+ +|++++|+....+.... +... ...++.++.+|++|++++.++++       
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   80 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG   80 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999 89999987654433221 1110 11158899999999988877664       


Q ss_pred             CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cC-CcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                      .+|+|||+||.....    ...+.+.+.+++|+.++.++++++.+    .+ .+++|++||..+.++....         
T Consensus        81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~---------  151 (259)
T PRK12384         81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHN---------  151 (259)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCC---------
Confidence            579999999865432    12334578889999999888887744    44 3689999997654443221         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHH---hcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCC-----CCCC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK-----DTQE  222 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~  222 (307)
                                 ..|+.+|.+.+.+++.++.   +.|++++++|||.++++....  ..+..+.........     ....
T Consensus       152 -----------~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  218 (259)
T PRK12384        152 -----------SGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQ--SLLPQYAKKLGIKPDEVEQYYIDK  218 (259)
T ss_pred             -----------chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhh--hhhHHHHHhcCCChHHHHHHHHHh
Confidence                       5799999999988887764   469999999999887654321  111111111000000     0001


Q ss_pred             CcccCcccHHHHHHHHHHhhcCCC--CCce-EEecCC
Q 021819          223 YHWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTNG  256 (307)
Q Consensus       223 ~~~~~~i~~~dva~~~~~~~~~~~--~~g~-~~~~~~  256 (307)
                      .....+++++|+++++++++....  ..|. +++.++
T Consensus       219 ~~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g  255 (259)
T PRK12384        219 VPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGG  255 (259)
T ss_pred             CcccCCCCHHHHHHHHHHHcCcccccccCceEEEcCC
Confidence            134678999999999998876543  2354 555543

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.6e-22  Score=172.79  Aligned_cols=214  Identities=18%  Similarity=0.164  Sum_probs=150.5

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------Cc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~~   81 (307)
                      ||+++||||+|+||+++++.|+++|+ +|++++|+......+...      ++.++.+|++|.+++.++++       ++
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~------~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   73 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAA------GFTAVQLDVNDGAALARLAEELEAEHGGL   73 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHC------CCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            47999999999999999999999999 899999876544333221      56788999999988887764       57


Q ss_pred             cEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh---cCCcEEEEecCcceeccCCCCCCcccccCCCCch
Q 021819           82 KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR---FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (307)
Q Consensus        82 d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~  154 (307)
                      |+|||+||.....    ...+++...+++|+.++.++++++..   .+.+++|++||..+..+.+..             
T Consensus        74 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------------  140 (274)
T PRK05693         74 DVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPFA-------------  140 (274)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCCc-------------
Confidence            9999999975432    22345678899999999999998743   234689999997765443332             


Q ss_pred             hhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcch----------HHHHHHHHcCCCCCC
Q 021819          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNAS----------CAVLQQLLQGSKDTQ  221 (307)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~----------~~~~~~~~~~~~~~~  221 (307)
                             ..|+.+|...+.+.+.++.+   .|+++++++||.|.++.........          ...........    
T Consensus       141 -------~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  209 (274)
T PRK05693        141 -------GAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARA----  209 (274)
T ss_pred             -------cHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHH----
Confidence                   57999999999988777654   5999999999999887543321000          00000000000    


Q ss_pred             CCcccCcccHHHHHHHHHHhhcCCCCCceEEe
Q 021819          222 EYHWLGAVPVKDVAKAQVLLFESPAASGRYLC  253 (307)
Q Consensus       222 ~~~~~~~i~~~dva~~~~~~~~~~~~~g~~~~  253 (307)
                      ........+++|+|+.++.+++.+.....+..
T Consensus       210 ~~~~~~~~~~~~~a~~i~~~~~~~~~~~~~~~  241 (274)
T PRK05693        210 RASQDNPTPAAEFARQLLAAVQQSPRPRLVRL  241 (274)
T ss_pred             HhccCCCCCHHHHHHHHHHHHhCCCCCceEEe
Confidence            00011246899999999999987665444443

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.90  E-value=6.4e-23  Score=178.87  Aligned_cols=211  Identities=18%  Similarity=0.103  Sum_probs=150.7

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      |+..++++++||||+|+||+++++.|+++|+ +|++++|+.+..+.+.........++.++.+|++|+++++++++    
T Consensus         2 ~~~l~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~   80 (330)
T PRK06139          2 MGPLHGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAAS   80 (330)
T ss_pred             CcCCCCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            3445678999999999999999999999999 89999997655433222111111167788999999999888774    


Q ss_pred             ---CccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 ---GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                         .+|++|||||......    ..+.+.+.+++|+.++.++.+++    ++.+.+++|++||..+..+.+..       
T Consensus        81 ~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~-------  153 (330)
T PRK06139         81 FGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYA-------  153 (330)
T ss_pred             hcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCc-------
Confidence               5799999999754422    22345778999999998888776    44455789999997765443332       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh----cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (307)
                                   ..|+.+|...+.+.+.++.+    .++++++++||.+.++........        .....    ..
T Consensus       154 -------------~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~--------~~~~~----~~  208 (330)
T PRK06139        154 -------------AAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANY--------TGRRL----TP  208 (330)
T ss_pred             -------------hhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccc--------ccccc----cC
Confidence                         56999999877777666544    379999999999998864321100        00000    01


Q ss_pred             ccCcccHHHHHHHHHHhhcCCCC
Q 021819          225 WLGAVPVKDVAKAQVLLFESPAA  247 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~~~  247 (307)
                      ...+.+++|+|++++.+++++..
T Consensus       209 ~~~~~~pe~vA~~il~~~~~~~~  231 (330)
T PRK06139        209 PPPVYDPRRVAKAVVRLADRPRA  231 (330)
T ss_pred             CCCCCCHHHHHHHHHHHHhCCCC
Confidence            22357999999999999987653

>PRK08264 short chain dehydrogenase; Validated

Probab=99.90  E-value=2.9e-22  Score=167.56  Aligned_cols=193  Identities=22%  Similarity=0.190  Sum_probs=147.3

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc---C
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---G   80 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~---~   80 (307)
                      |++.++++++||||+|+||+++++.|+++|+.+|+++.|+.++.+.      ... ++.++.+|++|.+++.++++   .
T Consensus         1 ~~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~------~~~-~~~~~~~D~~~~~~~~~~~~~~~~   73 (238)
T PRK08264          1 MMDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD------LGP-RVVPLQLDVTDPASVAAAAEAASD   73 (238)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh------cCC-ceEEEEecCCCHHHHHHHHHhcCC
Confidence            3445578999999999999999999999998678888887654332      111 68899999999999988876   4


Q ss_pred             ccEEEEeccC-CCC----CCCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           81 CKGVFHVASP-CTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        81 ~d~vi~~a~~-~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                      +|+|||++|. ...    ....+.+...+++|+.++.++++++.    +.+.+++|++||..++.+.+..          
T Consensus        74 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~----------  143 (238)
T PRK08264         74 VTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNL----------  143 (238)
T ss_pred             CCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCc----------
Confidence            7999999997 322    12234457789999999999999875    3456789999997654433221          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (307)
                                ..|+.+|...+.+.+.++.+   .+++++++||+.+.++.....                      ....
T Consensus       144 ----------~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~----------------------~~~~  191 (238)
T PRK08264        144 ----------GTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGL----------------------DAPK  191 (238)
T ss_pred             ----------hHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccC----------------------CcCC
Confidence                      57999999999998887765   389999999999977652211                      1124


Q ss_pred             ccHHHHHHHHHHhhcCC
Q 021819          229 VPVKDVAKAQVLLFESP  245 (307)
Q Consensus       229 i~~~dva~~~~~~~~~~  245 (307)
                      ++++|+++.++..+..+
T Consensus       192 ~~~~~~a~~~~~~~~~~  208 (238)
T PRK08264        192 ASPADVARQILDALEAG  208 (238)
T ss_pred             CCHHHHHHHHHHHHhCC
Confidence            78899999998888754

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.90  E-value=4e-22  Score=167.57  Aligned_cols=216  Identities=20%  Similarity=0.218  Sum_probs=151.1

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC-Ccccc-cCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ++++++||||||+||+++++.|+++|+ +|+.+.|+... ..... .+..... ++.++.+|++|.+++.++++      
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGG-KALAVQGDVSDAESVERAVDEAKAEF   81 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            457999999999999999999999999 88777775542 11111 1111112 68889999999998887765      


Q ss_pred             -CccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHHHhc----CCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 -GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                       ++|+|||+||......    ..+.+.+.+.+|+.++.++++++.+.    +.++||++||..+.++.+..         
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~---------  152 (248)
T PRK05557         82 GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQ---------  152 (248)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCC---------
Confidence             5799999999755321    12234677889999999999988653    55789999997666554332         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                                 ..|+.+|.+.+.+++.+++.   .++++++++||.+.++.....   ...+........+      ...
T Consensus       153 -----------~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~---~~~~~~~~~~~~~------~~~  212 (248)
T PRK05557        153 -----------ANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDAL---PEDVKEAILAQIP------LGR  212 (248)
T ss_pred             -----------chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccccc---ChHHHHHHHhcCC------CCC
Confidence                       56999999999888776643   489999999998876653322   1222222222211      234


Q ss_pred             cccHHHHHHHHHHhhcC--CCCCce-EEec
Q 021819          228 AVPVKDVAKAQVLLFES--PAASGR-YLCT  254 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~--~~~~g~-~~~~  254 (307)
                      +.+++|+++++.+++..  ....|. +++.
T Consensus       213 ~~~~~~va~~~~~l~~~~~~~~~g~~~~i~  242 (248)
T PRK05557        213 LGQPEEIASAVAFLASDEAAYITGQTLHVN  242 (248)
T ss_pred             CcCHHHHHHHHHHHcCcccCCccccEEEec
Confidence            67999999999888765  233454 4444

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.90  E-value=3e-22  Score=169.49  Aligned_cols=228  Identities=14%  Similarity=0.074  Sum_probs=155.7

Q ss_pred             CccccccCCcEEEEeCCc--hhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHh
Q 021819            1 MASEAEKEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV   78 (307)
Q Consensus         1 m~~m~~~~~~~ilItGat--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~   78 (307)
                      |.+++++++|+++||||+  ++||++++++|+++|+ +|++.+|+....+.+.++..... .+..+++|++|++++++++
T Consensus         2 ~~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~   79 (258)
T PRK07533          2 MQPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELD-APIFLPLDVREPGQLEAVF   79 (258)
T ss_pred             CCcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhc-cceEEecCcCCHHHHHHHH
Confidence            555566678999999998  5999999999999999 88888886533222222211111 3467899999999888776


Q ss_pred             c-------CccEEEEeccCCCC--------CCCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCC
Q 021819           79 E-------GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGW  141 (307)
Q Consensus        79 ~-------~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~  141 (307)
                      +       .+|++|||||....        +...+++.+.+++|+.++.++.+++...  ..+++|++||..+..+.+. 
T Consensus        80 ~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~~~-  158 (258)
T PRK07533         80 ARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVEN-  158 (258)
T ss_pred             HHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCCcc-
Confidence            4       47999999997532        1223456889999999999999987543  1258999998655332222 


Q ss_pred             CCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCC
Q 021819          142 KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK  218 (307)
Q Consensus       142 ~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~  218 (307)
                                    +     ..|+.+|...+.+.+.++.+   .|+++++|.||.|.++....... .....+......+
T Consensus       159 --------------~-----~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p  218 (258)
T PRK07533        159 --------------Y-----NLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDD-FDALLEDAAERAP  218 (258)
T ss_pred             --------------c-----hhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCC-cHHHHHHHHhcCC
Confidence                          1     46888998888888777655   48999999999998875332111 1122222222111


Q ss_pred             CCCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          219 DTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       219 ~~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                            ...+..++|+|.++++++...  ...|..+..+++
T Consensus       219 ------~~r~~~p~dva~~~~~L~s~~~~~itG~~i~vdgg  253 (258)
T PRK07533        219 ------LRRLVDIDDVGAVAAFLASDAARRLTGNTLYIDGG  253 (258)
T ss_pred             ------cCCCCCHHHHHHHHHHHhChhhccccCcEEeeCCc
Confidence                  234678999999999988643  345665555444

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.6e-22  Score=171.78  Aligned_cols=205  Identities=19%  Similarity=0.167  Sum_probs=148.6

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc-------C
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~   80 (307)
                      +++++||||+|+||+++++.|+++|+ +|++++|+....+.+.. +..... ++.++.+|++|++++.++++       +
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGG-EALVVPTDVSDAEACERLIEAAVARFGG   78 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999 89999997544332221 111122 68889999999998887765       5


Q ss_pred             ccEEEEeccCCCCCC-----CCChhhhhhhhhHHHHHHHHHHHHh---cCCcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           81 CKGVFHVASPCTLED-----PVDPEKELILPAVQGTLNVLEAAKR---FGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        81 ~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      +|+||||+|......     ..+.+.+.+++|+.++.++++.+.+   .+.+++|++||..++.+.+..           
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-----------  147 (263)
T PRK06181         79 IDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTR-----------  147 (263)
T ss_pred             CCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCCc-----------
Confidence            799999998755321     1223467799999999999999853   234789999997765543332           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCC-CCCcccCc
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEYHWLGA  228 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  228 (307)
                               ..|+.+|...+.+.+.++.+   .++++++++||.+.++........         .+.+.. .+....++
T Consensus       148 ---------~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~  209 (263)
T PRK06181        148 ---------SGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDG---------DGKPLGKSPMQESKI  209 (263)
T ss_pred             ---------cHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccc---------cccccccccccccCC
Confidence                     57999999999888776543   489999999999988754321000         011111 11123478


Q ss_pred             ccHHHHHHHHHHhhcC
Q 021819          229 VPVKDVAKAQVLLFES  244 (307)
Q Consensus       229 i~~~dva~~~~~~~~~  244 (307)
                      ++++|+|+++..+++.
T Consensus       210 ~~~~dva~~i~~~~~~  225 (263)
T PRK06181        210 MSAEECAEAILPAIAR  225 (263)
T ss_pred             CCHHHHHHHHHHHhhC
Confidence            9999999999999985

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.7e-22  Score=173.14  Aligned_cols=217  Identities=23%  Similarity=0.156  Sum_probs=154.8

Q ss_pred             cccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc---
Q 021819            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (307)
Q Consensus         3 ~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~---   79 (307)
                      +|...++++++||||+|+||+++++.|.++|+ +|++++|+.+..+.+........ .+..+++|++|.+++.++++   
T Consensus         3 ~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~   80 (296)
T PRK05872          3 PMTSLAGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDD-RVLTVVADVTDLAAMQAAAEEAV   80 (296)
T ss_pred             CCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCC-cEEEEEecCCCHHHHHHHHHHHH
Confidence            35556788999999999999999999999999 89999997655443322211111 56677799999988877764   


Q ss_pred             ----CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc---CCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 ----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 ----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                          .+|+||||||.....    ...+++.+.+++|+.++.++++++...   ..++||++||..+..+.+..       
T Consensus        81 ~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  153 (296)
T PRK05872         81 ERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPGM-------  153 (296)
T ss_pred             HHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCCc-------
Confidence                579999999975431    223345788999999999999988542   23689999997765443332       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                                   ..|+.+|...+.+.+.++.+   .|+++++++||.+.++......... ..........+    ...
T Consensus       154 -------------~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~-~~~~~~~~~~~----~p~  215 (296)
T PRK05872        154 -------------AAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADL-PAFRELRARLP----WPL  215 (296)
T ss_pred             -------------hHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccc-hhHHHHHhhCC----Ccc
Confidence                         56999999999998877643   5899999999999887543321110 11222221111    112


Q ss_pred             cCcccHHHHHHHHHHhhcCCC
Q 021819          226 LGAVPVKDVAKAQVLLFESPA  246 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~~  246 (307)
                      ..+++++|+|++++.++....
T Consensus       216 ~~~~~~~~va~~i~~~~~~~~  236 (296)
T PRK05872        216 RRTTSVEKCAAAFVDGIERRA  236 (296)
T ss_pred             cCCCCHHHHHHHHHHHHhcCC
Confidence            346799999999999987644

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.90  E-value=3.2e-22  Score=168.14  Aligned_cols=219  Identities=18%  Similarity=0.164  Sum_probs=153.2

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEE-eCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      +.+|+++||||+|+||+++++.|+++|+ +|+.+ .|+......+.. +.... .++.++.+|++|++++.++++     
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEG-GDAIAVKADVSSEEDVENLVEQIVEK   80 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC-CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3467999999999999999999999999 88887 776544322211 11111 158889999999998887775     


Q ss_pred             --CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                        ++|+|||++|.....    ...+.++..+++|+.++.++++.+..    .+.+++|++||....++.+..        
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~--------  152 (247)
T PRK05565         81 FGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCE--------  152 (247)
T ss_pred             hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCc--------
Confidence              689999999976321    12334578899999999888887753    456789999997766554332        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                                  ..|+.+|...+.+++.++++   .+++++++|||.+.++.......   ..........      ...
T Consensus       153 ------------~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~---~~~~~~~~~~------~~~  211 (247)
T PRK05565        153 ------------VLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSE---EDKEGLAEEI------PLG  211 (247)
T ss_pred             ------------cHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccCh---HHHHHHHhcC------CCC
Confidence                        46899998888777766554   48999999999998776443211   1111111111      123


Q ss_pred             CcccHHHHHHHHHHhhcCCC--CCceEEecCC
Q 021819          227 GAVPVKDVAKAQVLLFESPA--ASGRYLCTNG  256 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~~--~~g~~~~~~~  256 (307)
                      .+..++|+++++++++....  ..|.++..+.
T Consensus       212 ~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~  243 (247)
T PRK05565        212 RLGKPEEIAKVVLFLASDDASYITGQIITVDG  243 (247)
T ss_pred             CCCCHHHHHHHHHHHcCCccCCccCcEEEecC
Confidence            45789999999999986643  3466554443

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.90  E-value=2e-22  Score=169.18  Aligned_cols=218  Identities=17%  Similarity=0.135  Sum_probs=150.4

Q ss_pred             cccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         5 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      ++.++++++||||+|+||+++++.|+++|+ .|+...|+.+..+.+....  .. ++.++.+|++|.++++++++     
T Consensus         2 ~~~~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~--~~-~~~~~~~D~~~~~~~~~~~~~~~~~   77 (245)
T PRK12936          2 FDLSGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAEL--GE-RVKIFPANLSDRDEVKALGQKAEAD   77 (245)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHh--CC-ceEEEEccCCCHHHHHHHHHHHHHH
Confidence            344578999999999999999999999999 8888877654443322211  11 67889999999998887754     


Q ss_pred             --CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                        ++|+||||||.....    ...+++.+.+++|+.++.++++++.+    .+.++||++||..+.++.+..        
T Consensus        78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--------  149 (245)
T PRK12936         78 LEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQ--------  149 (245)
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCC--------
Confidence              589999999975431    12345678899999999999888743    356789999997766654432        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                                  ..|+.+|...+.+.+.++++   .++++++++|+.+.++......   ...........      ...
T Consensus       150 ------------~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~---~~~~~~~~~~~------~~~  208 (245)
T PRK12936        150 ------------ANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLN---DKQKEAIMGAI------PMK  208 (245)
T ss_pred             ------------cchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccC---hHHHHHHhcCC------CCC
Confidence                        45888888777666655543   4899999999988766432211   11111111111      123


Q ss_pred             CcccHHHHHHHHHHhhcCCC--CCce-EEecC
Q 021819          227 GAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~~--~~g~-~~~~~  255 (307)
                      .+.+++|+++++.+++....  ..|. +++.+
T Consensus       209 ~~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~~  240 (245)
T PRK12936        209 RMGTGAEVASAVAYLASSEAAYVTGQTIHVNG  240 (245)
T ss_pred             CCcCHHHHHHHHHHHcCccccCcCCCEEEECC
Confidence            46689999999988886543  2354 44443

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.90  E-value=2.4e-22  Score=170.65  Aligned_cols=224  Identities=20%  Similarity=0.142  Sum_probs=155.1

Q ss_pred             cccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         5 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      +.+++|+++||||+|+||++++++|+++|+ +|++++|+++..+.+....   ..++.++++|++|.+++.++++     
T Consensus         2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (263)
T PRK06200          2 GWLHGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRF---GDHVLVVEGDVTSYADNQRAVDQTVDA   77 (263)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHh
Confidence            334578999999999999999999999999 8999999765544332221   1157889999999988877765     


Q ss_pred             --CccEEEEeccCCCC-----CCCCCh----hhhhhhhhHHHHHHHHHHHHhc---CCcEEEEecCcceeccCCCCCCcc
Q 021819           80 --GCKGVFHVASPCTL-----EDPVDP----EKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKV  145 (307)
Q Consensus        80 --~~d~vi~~a~~~~~-----~~~~~~----~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~iSS~~~~~~~~~~~~~~  145 (307)
                        .+|++||+||....     ....+.    +.+.+++|+.++..+++++...   ..+++|++||..+..+.++.    
T Consensus        78 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~----  153 (263)
T PRK06200         78 FGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGGG----  153 (263)
T ss_pred             cCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCC----
Confidence              57999999997532     111121    5677899999999988888532   23689999997765443332    


Q ss_pred             cccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc--CCcEEEEecCceeCCCCCCCC--------cchHHHHHHHHc
Q 021819          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYL--------NASCAVLQQLLQ  215 (307)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~i~~~ivrp~~v~g~~~~~~~--------~~~~~~~~~~~~  215 (307)
                                      ..|+.+|...+.+.+.++.+.  ++++++|.||.|.++......        ............
T Consensus       154 ----------------~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (263)
T PRK06200        154 ----------------PLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAA  217 (263)
T ss_pred             ----------------chhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhc
Confidence                            469999999999998887764  599999999999887532110        000111111111


Q ss_pred             CCCCCCCCcccCcccHHHHHHHHHHhhcCC---CCCceEEecCCcc
Q 021819          216 GSKDTQEYHWLGAVPVKDVAKAQVLLFESP---AASGRYLCTNGIY  258 (307)
Q Consensus       216 ~~~~~~~~~~~~~i~~~dva~~~~~~~~~~---~~~g~~~~~~~~~  258 (307)
                      ..      ....+..++|+|.++++++...   ...|..+..++++
T Consensus       218 ~~------p~~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG~  257 (263)
T PRK06200        218 IT------PLQFAPQPEDHTGPYVLLASRRNSRALTGVVINADGGL  257 (263)
T ss_pred             CC------CCCCCCCHHHHhhhhhheecccccCcccceEEEEcCce
Confidence            11      1235678999999999988644   2346554444443

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.9e-22  Score=170.96  Aligned_cols=203  Identities=23%  Similarity=0.194  Sum_probs=148.5

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--------C
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--------G   80 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--------~   80 (307)
                      ||+++||||+|+||++++++|+++|+ +|++++|+.+..+.+..... . .++.++++|++|.+++.++++        +
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~   77 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELG-A-GNAWTGALDVTDRAAWDAALADFAAATGGR   77 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhc-C-CceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            57899999999999999999999999 89999987665444332211 1 168899999999988887665        4


Q ss_pred             ccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           81 CKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        81 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      +|+||||||......    ..++.+..+++|+.++.++++++.    +.+.+++|++||..+.++....           
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-----------  146 (260)
T PRK08267         78 LDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGL-----------  146 (260)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCc-----------
Confidence            599999999764321    223457889999999999988874    3455789999997776664442           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcc
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (307)
                               ..|+.+|...+.+.+.++.+   .++++++++|+.+.++.........   ......        .....+
T Consensus       147 ---------~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~---~~~~~~--------~~~~~~  206 (260)
T PRK08267        147 ---------AVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEV---DAGSTK--------RLGVRL  206 (260)
T ss_pred             ---------hhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchh---hhhhHh--------hccCCC
Confidence                     56999999999888887654   4899999999999776533210000   000000        011236


Q ss_pred             cHHHHHHHHHHhhcCC
Q 021819          230 PVKDVAKAQVLLFESP  245 (307)
Q Consensus       230 ~~~dva~~~~~~~~~~  245 (307)
                      .++|+|++++.+++.+
T Consensus       207 ~~~~va~~~~~~~~~~  222 (260)
T PRK08267        207 TPEDVAEAVWAAVQHP  222 (260)
T ss_pred             CHHHHHHHHHHHHhCC
Confidence            7899999999999754

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.6e-22  Score=177.00  Aligned_cols=207  Identities=17%  Similarity=0.078  Sum_probs=146.5

Q ss_pred             cccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         5 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      +..++++|+||||+|+||+++++.|+++|+ +|++++|+.+..+.+.. +...+. ++.++.+|++|+++++++++    
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~-~~~~v~~Dv~d~~~v~~~~~~~~~   81 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGG-EALAVVADVADAEAVQAAADRAEE   81 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCC-cEEEEEecCCCHHHHHHHHHHHHH
Confidence            345578999999999999999999999999 89999997654333221 111112 67889999999999887765    


Q ss_pred             ---CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                         .+|++|||||.....    ...++++..+++|+.++.++++.+    ++.+.++||++||..+..+.+..       
T Consensus        82 ~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~-------  154 (334)
T PRK07109         82 ELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQ-------  154 (334)
T ss_pred             HCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcc-------
Confidence               589999999975431    223445778899987776655554    55556799999997765433321       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh-----cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCC
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (307)
                                   ..|+.+|...+.+.+.++.+     .++++++++|+.+.++....        ........    ..
T Consensus       155 -------------~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~--------~~~~~~~~----~~  209 (334)
T PRK07109        155 -------------SAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDW--------ARSRLPVE----PQ  209 (334)
T ss_pred             -------------hHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhh--------hhhhcccc----cc
Confidence                         56999999888887766544     36999999999998764211        11101100    11


Q ss_pred             cccCcccHHHHHHHHHHhhcCC
Q 021819          224 HWLGAVPVKDVAKAQVLLFESP  245 (307)
Q Consensus       224 ~~~~~i~~~dva~~~~~~~~~~  245 (307)
                      ....+.+++|+|+++++++.++
T Consensus       210 ~~~~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        210 PVPPIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             CCCCCCCHHHHHHHHHHHHhCC
Confidence            1234578999999999999876

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.90  E-value=5.2e-22  Score=167.80  Aligned_cols=216  Identities=18%  Similarity=0.187  Sum_probs=153.4

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      +++|+|+||||+|+||+++++.|+++|+ +|++++|+....+.+.. +..... ++.++.+|++|.+++.++++      
T Consensus         9 l~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~   86 (255)
T PRK06113          9 LDGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGG-QAFACRCDITSEQELSALADFALSKL   86 (255)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999 88888886554433221 111112 57788999999998877664      


Q ss_pred             -CccEEEEeccCCCCC---CCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 -GCKGVFHVASPCTLE---DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                       ++|++|||||.....   ...+.+...+++|+.++.++++++.    +.+.+++|++||..+..+....          
T Consensus        87 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~----------  156 (255)
T PRK06113         87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINM----------  156 (255)
T ss_pred             CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCc----------
Confidence             469999999975432   1224456779999999999999985    3344689999997654332221          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (307)
                                ..|+.+|.+.+.+++.++.+   .+++++++.||.+.++......  ...+..+.....+      ...+
T Consensus       157 ----------~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~--~~~~~~~~~~~~~------~~~~  218 (255)
T PRK06113        157 ----------TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI--TPEIEQKMLQHTP------IRRL  218 (255)
T ss_pred             ----------chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeccccccccccccc--CHHHHHHHHhcCC------CCCC
Confidence                      56999999999999887754   4899999999999887643211  1222222222211      2346


Q ss_pred             ccHHHHHHHHHHhhcCCC--CCceEE
Q 021819          229 VPVKDVAKAQVLLFESPA--ASGRYL  252 (307)
Q Consensus       229 i~~~dva~~~~~~~~~~~--~~g~~~  252 (307)
                      .+++|+++++++++....  ..|..+
T Consensus       219 ~~~~d~a~~~~~l~~~~~~~~~G~~i  244 (255)
T PRK06113        219 GQPQDIANAALFLCSPAASWVSGQIL  244 (255)
T ss_pred             cCHHHHHHHHHHHcCccccCccCCEE
Confidence            799999999999886432  246543

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.90  E-value=4.4e-22  Score=168.03  Aligned_cols=222  Identities=15%  Similarity=0.106  Sum_probs=154.8

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +++|+++||||+|+||++++++|.++|+ +|++.+++... +..+.+..... ++..+++|++|.+++.++++       
T Consensus         8 l~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~-~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (253)
T PRK08993          8 LEGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPT-ETIEQVTALGR-RFLSLTADLRKIDGIPALLERAVAEFG   84 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchH-HHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            5678999999999999999999999999 88887764321 11111111111 67889999999988888775       


Q ss_pred             CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cC-CcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                      .+|++|||||.....    ...+++.+.+++|+.++.++++++..    .+ .+++|++||..+..+.+..         
T Consensus        85 ~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  155 (253)
T PRK08993         85 HIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRV---------  155 (253)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCC---------
Confidence            579999999975431    22345789999999999999988743    22 3689999997664433322         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                                 ..|+.+|.+.+.+.+.++.+   .|++++.++||.+.++....... ............    +  ...
T Consensus       156 -----------~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~-~~~~~~~~~~~~----p--~~r  217 (253)
T PRK08993        156 -----------PSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRA-DEQRSAEILDRI----P--AGR  217 (253)
T ss_pred             -----------cchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhcc-chHHHHHHHhcC----C--CCC
Confidence                       46999999999888877766   48999999999998875432110 011111111111    1  234


Q ss_pred             cccHHHHHHHHHHhhcCC--CCCceEEecCCcc
Q 021819          228 AVPVKDVAKAQVLLFESP--AASGRYLCTNGIY  258 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~  258 (307)
                      +..++|+|..+.+++...  ...|..+..++++
T Consensus       218 ~~~p~eva~~~~~l~s~~~~~~~G~~~~~dgg~  250 (253)
T PRK08993        218 WGLPSDLMGPVVFLASSASDYINGYTIAVDGGW  250 (253)
T ss_pred             CcCHHHHHHHHHHHhCccccCccCcEEEECCCE
Confidence            778999999999988754  3346655555443

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.6e-22  Score=169.05  Aligned_cols=222  Identities=17%  Similarity=0.121  Sum_probs=156.0

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ..++|+++||||+|+||+++++.|+++|+ +|+++.|+.+..+.+.........++.++.+|+++++++.++++      
T Consensus         6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (258)
T PRK06949          6 NLEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEA   84 (258)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            34578999999999999999999999999 89999997655433322111111167889999999998888775      


Q ss_pred             -CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cC--------CcEEEEecCcceeccCCCCC
Q 021819           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FG--------VRRVVVTSSISAIVPNPGWK  142 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~--------~~~~v~iSS~~~~~~~~~~~  142 (307)
                       .+|++||++|.....    ...+.+...+++|+.++.++++++..    ..        .+++|++||..+..+.+.. 
T Consensus        85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-  163 (258)
T PRK06949         85 GTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQI-  163 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCc-
Confidence             579999999975431    12235678899999999999988742    21        3589999997654332221 


Q ss_pred             CcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCC
Q 021819          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD  219 (307)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  219 (307)
                                         ..|+.+|.+.+.+++.++.+   .++++++++||.|+++.......  ....... .... 
T Consensus       164 -------------------~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~-~~~~-  220 (258)
T PRK06949        164 -------------------GLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWE--TEQGQKL-VSML-  220 (258)
T ss_pred             -------------------cHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccC--hHHHHHH-HhcC-
Confidence                               57999999999988887665   48999999999999987542211  1111111 1110 


Q ss_pred             CCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCC
Q 021819          220 TQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNG  256 (307)
Q Consensus       220 ~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~  256 (307)
                          ....+..++|++.++.+++...  ...|.++..++
T Consensus       221 ----~~~~~~~p~~~~~~~~~l~~~~~~~~~G~~i~~dg  255 (258)
T PRK06949        221 ----PRKRVGKPEDLDGLLLLLAADESQFINGAIISADD  255 (258)
T ss_pred             ----CCCCCcCHHHHHHHHHHHhChhhcCCCCcEEEeCC
Confidence                1234678899999999988743  34576665544

>PRK09242 tropinone reductase; Provisional

Probab=99.90  E-value=5.6e-22  Score=167.79  Aligned_cols=224  Identities=16%  Similarity=0.154  Sum_probs=157.5

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCC-CCCceEEEEcccCChhHHHHHhc--
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGA-GDANLRVFEADVLDSGAVSRAVE--   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~i~~D~~d~~~~~~~~~--   79 (307)
                      |..+++|+++||||+|+||+++++.|.++|+ +|++++|+.+..+.+.. +... ...++..+++|++++++++++++  
T Consensus         4 ~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   82 (257)
T PRK09242          4 RWRLDGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWV   82 (257)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            3445678999999999999999999999999 89999987654332221 1111 01267889999999988777664  


Q ss_pred             -----CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCccc
Q 021819           80 -----GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVF  146 (307)
Q Consensus        80 -----~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~  146 (307)
                           ++|+|||+||....    ....+++.+.+++|+.++.++++++.    +.+.+++|++||..+..+....     
T Consensus        83 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~-----  157 (257)
T PRK09242         83 EDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSG-----  157 (257)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCC-----
Confidence                 57999999997432    22334567889999999999988874    3455789999997665443332     


Q ss_pred             ccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCC
Q 021819          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (307)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (307)
                                     ..|+.+|...+.+++.++.+   .+++++.++||.+.++........ ..+........+     
T Consensus       158 ---------------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~-~~~~~~~~~~~~-----  216 (257)
T PRK09242        158 ---------------APYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSD-PDYYEQVIERTP-----  216 (257)
T ss_pred             ---------------cchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCC-hHHHHHHHhcCC-----
Confidence                           56999999999998877654   489999999999998875433111 222222222221     


Q ss_pred             cccCcccHHHHHHHHHHhhcCCC--CCceEEecC
Q 021819          224 HWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTN  255 (307)
Q Consensus       224 ~~~~~i~~~dva~~~~~~~~~~~--~~g~~~~~~  255 (307)
                       ...+..++|++.++.+++....  ..|..+..+
T Consensus       217 -~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~  249 (257)
T PRK09242        217 -MRRVGEPEEVAAAVAFLCMPAASYITGQCIAVD  249 (257)
T ss_pred             -CCCCcCHHHHHHHHHHHhCcccccccCCEEEEC
Confidence             2335688999999999886432  235544433

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.90  E-value=3.6e-22  Score=169.29  Aligned_cols=224  Identities=14%  Similarity=0.136  Sum_probs=151.1

Q ss_pred             ccCCcEEEEeCC--chhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            6 EKEEETVCVTGA--NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         6 ~~~~~~ilItGa--tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      .+++|+++||||  +++||+++++.|+++|+ +|+...|+....+.+.++..... ....+++|++|+++++++++    
T Consensus         3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~   80 (261)
T PRK08690          3 FLQGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELD-SELVFRCDVASDDEINQVFADLGK   80 (261)
T ss_pred             ccCCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccC-CceEEECCCCCHHHHHHHHHHHHH
Confidence            345789999997  67999999999999999 88877665322222333222111 34578999999999887774    


Q ss_pred             ---CccEEEEeccCCCCC---------CCCChhhhhhhhhHHHHHHHHHHHHhc---CCcEEEEecCcceeccCCCCCCc
Q 021819           80 ---GCKGVFHVASPCTLE---------DPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGK  144 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~iSS~~~~~~~~~~~~~  144 (307)
                         ++|++|||||.....         ...+.+...+++|+.++..+.+++...   +.++||++||..+..+.+..   
T Consensus        81 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~~~---  157 (261)
T PRK08690         81 HWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNY---  157 (261)
T ss_pred             HhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCCCc---
Confidence               579999999976421         112245677889999988888776432   22689999997765443332   


Q ss_pred             ccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC
Q 021819          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ  221 (307)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  221 (307)
                                       ..|+.+|...+.+.+.++.+   .|+++++|.||.|.++....... ............+   
T Consensus       158 -----------------~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~-~~~~~~~~~~~~p---  216 (261)
T PRK08690        158 -----------------NVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIAD-FGKLLGHVAAHNP---  216 (261)
T ss_pred             -----------------ccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCc-hHHHHHHHhhcCC---
Confidence                             56999999988888776644   58999999999998875322111 1122222222111   


Q ss_pred             CCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCcc
Q 021819          222 EYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIY  258 (307)
Q Consensus       222 ~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~  258 (307)
                         ...+..++|+|+++.+++...  ...|..+..+++.
T Consensus       217 ---~~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdgG~  252 (261)
T PRK08690        217 ---LRRNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGY  252 (261)
T ss_pred             ---CCCCCCHHHHHHHHHHHhCcccCCcceeEEEEcCCc
Confidence               234678999999999998753  3456655555544

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.5e-22  Score=169.01  Aligned_cols=217  Identities=18%  Similarity=0.192  Sum_probs=149.3

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC-CCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~-~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +++++||||+|+||++++++|+++|+ .|+...++. ........ +..... ++.++++|++|.+++.++++       
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGY-AVCLNYLRNRDAAEAVVQAIRRQGG-EALAVAADVADEADVLRLFEAVDRELG   79 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-eEEEecCCCHHHHHHHHHHHHhCCC-cEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence            35899999999999999999999999 676665432 22221111 111111 57789999999998888775       


Q ss_pred             CccEEEEeccCCCCC-----CCCChhhhhhhhhHHHHHHHHHHHHhc----C---CcEEEEecCcceeccCCCCCCcccc
Q 021819           80 GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAKRF----G---VRRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~---~~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                      .+|+|||+||.....     ...+++.+.+++|+.++.++++++.+.    +   -+++|++||..+.++.+..      
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~------  153 (248)
T PRK06123         80 RLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGE------  153 (248)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCC------
Confidence            579999999975421     122345688999999999998888543    1   2479999997766554331      


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCc
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (307)
                                   ...|+.+|...+.+++.++++.   +++++++||+.++|+.....  .............+      
T Consensus       154 -------------~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~--~~~~~~~~~~~~~p------  212 (248)
T PRK06123        154 -------------YIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASG--GEPGRVDRVKAGIP------  212 (248)
T ss_pred             -------------ccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhcc--CCHHHHHHHHhcCC------
Confidence                         0359999999999998887664   89999999999999864321  11222222222222      


Q ss_pred             ccCcccHHHHHHHHHHhhcCCC--CCce-EEec
Q 021819          225 WLGAVPVKDVAKAQVLLFESPA--ASGR-YLCT  254 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~~--~~g~-~~~~  254 (307)
                      ...+.+++|+++++++++....  ..|. |++.
T Consensus       213 ~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~  245 (248)
T PRK06123        213 MGRGGTAEEVARAILWLLSDEASYTTGTFIDVS  245 (248)
T ss_pred             CCCCcCHHHHHHHHHHHhCccccCccCCEEeec
Confidence            1223578999999999887542  3353 5544

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.90  E-value=3.6e-22  Score=169.23  Aligned_cols=227  Identities=15%  Similarity=0.099  Sum_probs=151.6

Q ss_pred             cccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCC-CCcccc-cCCCCCCCceEEEEcccCChhHHHHHhc---
Q 021819            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (307)
Q Consensus         5 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~-~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~---   79 (307)
                      ..+++|+++||||+++||+++++.|+++|+ +|++..|+.. ..+... .+......++.++++|++|+++++++++   
T Consensus         4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   82 (260)
T PRK08416          4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKID   82 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            345678999999999999999999999999 7877765432 222211 1111111267899999999998887775   


Q ss_pred             ----CccEEEEeccCCCC----------CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCC
Q 021819           80 ----GCKGVFHVASPCTL----------EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGW  141 (307)
Q Consensus        80 ----~~d~vi~~a~~~~~----------~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~  141 (307)
                          ++|++|||||....          ....+.+...+++|+.+...+.+.+    ++.+.++||++||..+..+.+..
T Consensus        83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  162 (260)
T PRK08416         83 EDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENY  162 (260)
T ss_pred             HhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCc
Confidence                47999999986421          1112345677888888777666655    34445689999996654332221


Q ss_pred             CCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCC
Q 021819          142 KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK  218 (307)
Q Consensus       142 ~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~  218 (307)
                                          ..|+.+|...+.+.+.++.+.   |+++++|+||.+.++....... ............+
T Consensus       163 --------------------~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~-~~~~~~~~~~~~~  221 (260)
T PRK08416        163 --------------------AGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTN-YEEVKAKTEELSP  221 (260)
T ss_pred             --------------------ccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccC-CHHHHHHHHhcCC
Confidence                                569999999999998887764   8999999999998775322111 1122222222111


Q ss_pred             CCCCCcccCcccHHHHHHHHHHhhcCCC--CCceEEecCCccc
Q 021819          219 DTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQ  259 (307)
Q Consensus       219 ~~~~~~~~~~i~~~dva~~~~~~~~~~~--~~g~~~~~~~~~~  259 (307)
                            ...+.+++|+|.++++++....  ..|.++..+++.+
T Consensus       222 ------~~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdgg~~  258 (260)
T PRK08416        222 ------LNRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGGTT  258 (260)
T ss_pred             ------CCCCCCHHHHHHHHHHHcChhhhcccCcEEEEcCCee
Confidence                  2346789999999999886432  3466555454443

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.90  E-value=5e-22  Score=173.57  Aligned_cols=192  Identities=15%  Similarity=0.080  Sum_probs=131.1

Q ss_pred             cccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         5 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      +..++|+++||||+|+||+++++.|+++|+ +|++++|+..+.+.+.........++.++.+|++|.+++.++++     
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   80 (322)
T PRK07453          2 SQDAKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRAL   80 (322)
T ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            334578999999999999999999999999 89999987654433222111111268889999999999888775     


Q ss_pred             --CccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHHHh----cC--CcEEEEecCcceeccCCCC-C--C
Q 021819           80 --GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKR----FG--VRRVVVTSSISAIVPNPGW-K--G  143 (307)
Q Consensus        80 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~~~~v~iSS~~~~~~~~~~-~--~  143 (307)
                        .+|+||||||....     ....+.++..+.+|+.|+.++++++..    .+  .++||++||....+..... .  .
T Consensus        81 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~  160 (322)
T PRK07453         81 GKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIP  160 (322)
T ss_pred             CCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCC
Confidence              38999999997532     112345688899999999999888754    22  3599999997654321110 0  0


Q ss_pred             cccccCCC-------Cch-----hhhcccCccHHHHHHHHHHHHHHHHHhc----CCcEEEEecCceeCC
Q 021819          144 KVFDETSW-------TDL-----EYCKSRKKWYPVSKTLAEKAAWEFAEKH----GVDVVAIHPATCLGP  197 (307)
Q Consensus       144 ~~~~E~~~-------~~~-----~~~~~~~~~y~~sK~~~e~~~~~~~~~~----~i~~~ivrp~~v~g~  197 (307)
                      .+.+.++.       ..+     ..+..+...|+.||.+.+.+.+.+++++    |++++++|||.|++.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t  230 (322)
T PRK07453        161 APADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADT  230 (322)
T ss_pred             CccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCC
Confidence            00010000       000     0001123579999999888777777654    799999999999753

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.1e-21  Score=170.20  Aligned_cols=232  Identities=20%  Similarity=0.161  Sum_probs=148.1

Q ss_pred             cccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccc-ccCCC-CCCCceEEEEcccCChhHHHHHhc-
Q 021819            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPG-AGDANLRVFEADVLDSGAVSRAVE-   79 (307)
Q Consensus         3 ~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~-~~~~~-~~~~~~~~i~~D~~d~~~~~~~~~-   79 (307)
                      .|+..++|+|+||||+|+||+++++.|+++|+ +|+++.|+.+..... ..+.. ....++.++++|++|.+++.++++ 
T Consensus        10 ~~~~~~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~   88 (306)
T PRK06197         10 DIPDQSGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADA   88 (306)
T ss_pred             ccccCCCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHH
Confidence            34556788999999999999999999999999 899999875443221 11110 011267889999999998887765 


Q ss_pred             ------CccEEEEeccCCCCC--CCCChhhhhhhhhHHH----HHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccc
Q 021819           80 ------GCKGVFHVASPCTLE--DPVDPEKELILPAVQG----TLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        80 ------~~d~vi~~a~~~~~~--~~~~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                            ++|+||||||.....  ...+.++..+.+|+.+    +..+++.+++.+.++||++||....... .   ...+
T Consensus        89 ~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~-~---~~~~  164 (306)
T PRK06197         89 LRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRA-A---IHFD  164 (306)
T ss_pred             HHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccC-C---CCcc
Confidence                  479999999975432  2234557789999999    5555666666666799999996543211 1   1111


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEE--ecCceeCCCCCCCCcchHHHHHHHHcCCCCCCC
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAI--HPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~iv--rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (307)
                      +..+..+ +  .....|+.+|.+.+.+.+.++++.   +++++++  .||.|.++...........++.....       
T Consensus       165 ~~~~~~~-~--~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~~~~~~~~~~~-------  234 (306)
T PRK06197        165 DLQWERR-Y--NRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRALRPVATVLAP-------  234 (306)
T ss_pred             ccCcccC-C--CcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHHHHHHHHHHHh-------
Confidence            1111111 1  112579999999999988877654   6666655  79999887654332111111111110       


Q ss_pred             CcccCcccHHHHHHHHHHhhcCCC-CCceEE
Q 021819          223 YHWLGAVPVKDVAKAQVLLFESPA-ASGRYL  252 (307)
Q Consensus       223 ~~~~~~i~~~dva~~~~~~~~~~~-~~g~~~  252 (307)
                         +-..++++.+...+.+...+. ..|.|.
T Consensus       235 ---~~~~~~~~g~~~~~~~~~~~~~~~g~~~  262 (306)
T PRK06197        235 ---LLAQSPEMGALPTLRAATDPAVRGGQYY  262 (306)
T ss_pred             ---hhcCCHHHHHHHHHHHhcCCCcCCCeEE
Confidence               012355677777776666553 346654

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.1e-22  Score=166.10  Aligned_cols=206  Identities=23%  Similarity=0.248  Sum_probs=145.1

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc---CccEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GCKGVF   85 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~---~~d~vi   85 (307)
                      ||+++||||+|+||+++++.|+++ + +|++++|+.+..+.+....   . +++++++|++|++++.++++   ++|+||
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~---~-~~~~~~~D~~~~~~~~~~~~~~~~id~vi   76 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAEL---P-GATPFPVDLTDPEAIAAAVEQLGRLDVLV   76 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHh---c-cceEEecCCCCHHHHHHHHHhcCCCCEEE
Confidence            579999999999999999999999 7 8999999765433322111   1 57889999999999998887   589999


Q ss_pred             EeccCCCCCC----CCChhhhhhhhhHHHHHHHHHH----HHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhh
Q 021819           86 HVASPCTLED----PVDPEKELILPAVQGTLNVLEA----AKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC  157 (307)
Q Consensus        86 ~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~  157 (307)
                      |++|......    ..+.+.+.+++|+.+..++.+.    +++. .+++|++||..+..+....                
T Consensus        77 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~----------------  139 (227)
T PRK08219         77 HNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRANPGW----------------  139 (227)
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcCCCC----------------
Confidence            9999754321    1123466788998885555554    4444 3689999997664433221                


Q ss_pred             cccCccHHHHHHHHHHHHHHHHHh-cC-CcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHH
Q 021819          158 KSRKKWYPVSKTLAEKAAWEFAEK-HG-VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVA  235 (307)
Q Consensus       158 ~~~~~~y~~sK~~~e~~~~~~~~~-~~-i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva  235 (307)
                          ..|+.+|...+.+++.++.. .+ ++++.++||.+.++.....       ...  .+..    .....+++++|+|
T Consensus       140 ----~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~-------~~~--~~~~----~~~~~~~~~~dva  202 (227)
T PRK08219        140 ----GSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQRGL-------VAQ--EGGE----YDPERYLRPETVA  202 (227)
T ss_pred             ----chHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhhhh-------hhh--hccc----cCCCCCCCHHHHH
Confidence                57999999999888877654 24 8999999998766532111       000  0110    1234679999999


Q ss_pred             HHHHHhhcCCCCCceEEec
Q 021819          236 KAQVLLFESPAASGRYLCT  254 (307)
Q Consensus       236 ~~~~~~~~~~~~~g~~~~~  254 (307)
                      ++++++++.+.....+++.
T Consensus       203 ~~~~~~l~~~~~~~~~~~~  221 (227)
T PRK08219        203 KAVRFAVDAPPDAHITEVV  221 (227)
T ss_pred             HHHHHHHcCCCCCccceEE
Confidence            9999999876644445443

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.2e-22  Score=172.25  Aligned_cols=200  Identities=15%  Similarity=0.129  Sum_probs=146.1

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      .++++++||||+|+||+++++.|+++|+ +|++++|+.+..+.+.. +..... ++.++++|++|.+++.++++      
T Consensus        38 ~~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~  115 (293)
T PRK05866         38 LTGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGG-DAMAVPCDLSDLDAVDALVADVEKRI  115 (293)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3468999999999999999999999999 99999997654333222 111111 57789999999998888876      


Q ss_pred             -CccEEEEeccCCCCCCC------CChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceecc-CCCCCCcccc
Q 021819           80 -GCKGVFHVASPCTLEDP------VDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVP-NPGWKGKVFD  147 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~-~~~~~~~~~~  147 (307)
                       .+|++|||||.......      .+.....+++|+.++.++++++.    +.+.+++|++||.+.... .+.       
T Consensus       116 g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~-------  188 (293)
T PRK05866        116 GGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPL-------  188 (293)
T ss_pred             CCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCC-------
Confidence             68999999997643221      12346789999999888887763    556689999999654221 111       


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCc
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (307)
                                   ...|+.+|.+.+.+.+.++.+   .++++++++||.|-++......           ..       .
T Consensus       189 -------------~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~-----------~~-------~  237 (293)
T PRK05866        189 -------------FSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTK-----------AY-------D  237 (293)
T ss_pred             -------------cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccc-----------cc-------c
Confidence                         157999999999888877655   4899999999998777532110           00       0


Q ss_pred             ccCcccHHHHHHHHHHhhcCCC
Q 021819          225 WLGAVPVKDVAKAQVLLFESPA  246 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~~  246 (307)
                      ....++++++|+.++..++++.
T Consensus       238 ~~~~~~pe~vA~~~~~~~~~~~  259 (293)
T PRK05866        238 GLPALTADEAAEWMVTAARTRP  259 (293)
T ss_pred             CCCCCCHHHHHHHHHHHHhcCC
Confidence            1224689999999999998643

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.90  E-value=7.1e-22  Score=166.69  Aligned_cols=217  Identities=16%  Similarity=0.112  Sum_probs=148.7

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------Cc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~~   81 (307)
                      +|+++||||+|+||+++++.|+++|+ +|++.+|+....+.+.........++.++++|++|++++.++++       .+
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI   79 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence            36899999999999999999999999 89999987654433322111111268899999999988887664       57


Q ss_pred             cEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHh----cC-CcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           82 KGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        82 d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      |+|||++|....    +...+.+.+.+++|+.++.++++++.+    .+ .+++|++||..+..+.+..           
T Consensus        80 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~-----------  148 (252)
T PRK07677         80 DALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGV-----------  148 (252)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCC-----------
Confidence            999999986432    223334678999999999999999843    22 3689999986553322221           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHh----cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCc
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (307)
                               ..|+.+|...+.+.+.++.+    +|+++++++||.+.++.............++.....+      ...+
T Consensus       149 ---------~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~------~~~~  213 (252)
T PRK07677        149 ---------IHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVP------LGRL  213 (252)
T ss_pred             ---------cchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCC------CCCC
Confidence                     46888998888888776655    4899999999999854321110001222223222211      2346


Q ss_pred             ccHHHHHHHHHHhhcCC--CCCceEE
Q 021819          229 VPVKDVAKAQVLLFESP--AASGRYL  252 (307)
Q Consensus       229 i~~~dva~~~~~~~~~~--~~~g~~~  252 (307)
                      ..++|+++++.+++...  ...|..+
T Consensus       214 ~~~~~va~~~~~l~~~~~~~~~g~~~  239 (252)
T PRK07677        214 GTPEEIAGLAYFLLSDEAAYINGTCI  239 (252)
T ss_pred             CCHHHHHHHHHHHcCccccccCCCEE
Confidence            78999999988887643  2345443

>PRK08017 oxidoreductase; Provisional

Probab=99.90  E-value=6.5e-22  Score=167.28  Aligned_cols=204  Identities=21%  Similarity=0.191  Sum_probs=144.9

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--------Cc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--------GC   81 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--------~~   81 (307)
                      ++|+||||+|+||+++++.|+++|+ +|+++.|+.+..+.+...      +++.+.+|++|.+++.++++        .+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~   75 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSL------GFTGILLDLDDPESVERAADEVIALTDNRL   75 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhC------CCeEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            5899999999999999999999999 899999976554443322      57788999999988766553        35


Q ss_pred             cEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHH----HHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCc
Q 021819           82 KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNV----LEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (307)
Q Consensus        82 d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l----~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~  153 (307)
                      |.+||++|.....    ...+++.+.+++|+.|+.++    ++.+++.+.+++|++||..+..+.+..            
T Consensus        76 ~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~------------  143 (256)
T PRK08017         76 YGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGR------------  143 (256)
T ss_pred             eEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCc------------
Confidence            8999999865421    12234568899999998876    555566677899999996554332221            


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHH---HhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC-CCcccCcc
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFA---EKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ-EYHWLGAV  229 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~---~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i  229 (307)
                              ..|+.+|...|.+.+.++   ...++++++++||.+.++.......        .....+... +...+.++
T Consensus       144 --------~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~  207 (256)
T PRK08017        144 --------GAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQ--------TQSDKPVENPGIAARFTL  207 (256)
T ss_pred             --------cHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccc--------hhhccchhhhHHHhhcCC
Confidence                    579999999998876543   3458999999999886653221100        000011000 11234579


Q ss_pred             cHHHHHHHHHHhhcCCCCC
Q 021819          230 PVKDVAKAQVLLFESPAAS  248 (307)
Q Consensus       230 ~~~dva~~~~~~~~~~~~~  248 (307)
                      +++|+++++..+++++...
T Consensus       208 ~~~d~a~~~~~~~~~~~~~  226 (256)
T PRK08017        208 GPEAVVPKLRHALESPKPK  226 (256)
T ss_pred             CHHHHHHHHHHHHhCCCCC
Confidence            9999999999999877654

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.90  E-value=6.1e-22  Score=166.33  Aligned_cols=216  Identities=22%  Similarity=0.277  Sum_probs=151.0

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC-Cccc-ccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~-~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      .++++++||||+|+||+++++.|+++|+ +|+.+.|+... .+.+ ..+.... .++.++.+|++|.+++.++++     
T Consensus         3 ~~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (245)
T PRK12937          3 LSNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAG-GRAIAVQADVADAAAVTRLFDAAETA   80 (245)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcC-CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4568999999999999999999999999 77776664332 1111 1111111 268899999999998888776     


Q ss_pred             --CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                        ++|+|||+||....    ....+++...+++|+.++.++++++.+.  ..+++|++||.....+.+..          
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~----------  150 (245)
T PRK12937         81 FGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPGY----------  150 (245)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCCC----------
Confidence              58999999997542    1223345788999999999999988654  23589999986553332221          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (307)
                                ..|+.+|...+.+++.++.+   .++++++++||.+.++.....  ........+....+      ...+
T Consensus       151 ----------~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~--~~~~~~~~~~~~~~------~~~~  212 (245)
T PRK12937        151 ----------GPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNG--KSAEQIDQLAGLAP------LERL  212 (245)
T ss_pred             ----------chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhccc--CCHHHHHHHHhcCC------CCCC
Confidence                      57999999999999887665   389999999999887753221  11222333332221      2345


Q ss_pred             ccHHHHHHHHHHhhcCCC--CCceEE
Q 021819          229 VPVKDVAKAQVLLFESPA--ASGRYL  252 (307)
Q Consensus       229 i~~~dva~~~~~~~~~~~--~~g~~~  252 (307)
                      .+++|+++++.+++..+.  ..|.++
T Consensus       213 ~~~~d~a~~~~~l~~~~~~~~~g~~~  238 (245)
T PRK12937        213 GTPEEIAAAVAFLAGPDGAWVNGQVL  238 (245)
T ss_pred             CCHHHHHHHHHHHcCccccCccccEE
Confidence            688999999999886543  335543

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.5e-21  Score=161.50  Aligned_cols=205  Identities=19%  Similarity=0.163  Sum_probs=146.0

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------Ccc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------GCK   82 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------~~d   82 (307)
                      +|+++||||+|+||++++++|+++|+ +|+++.|+....     .      ...++.+|++|.++++++++      ++|
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~~-----~------~~~~~~~D~~~~~~~~~~~~~~~~~~~~d   70 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAIDD-----F------PGELFACDLADIEQTAATLAQINEIHPVD   70 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCcccc-----c------CceEEEeeCCCHHHHHHHHHHHHHhCCCc
Confidence            57899999999999999999999999 899999876431     1      22578899999998887776      579


Q ss_pred             EEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCCCch
Q 021819           83 GVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (307)
Q Consensus        83 ~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~  154 (307)
                      +|||++|......    ..+++...+++|+.++.++.+++    ++.+.+++|++||.. .++.+..             
T Consensus        71 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~-~~~~~~~-------------  136 (234)
T PRK07577         71 AIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA-IFGALDR-------------  136 (234)
T ss_pred             EEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc-ccCCCCc-------------
Confidence            9999999765421    23345678999999988887766    445667999999964 3332221             


Q ss_pred             hhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccH
Q 021819          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPV  231 (307)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  231 (307)
                             ..|+.+|...+.+.+.++.+   .+++++++|||.+.++....................+      ......+
T Consensus       137 -------~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~  203 (234)
T PRK07577        137 -------TSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIP------MRRLGTP  203 (234)
T ss_pred             -------hHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCC------CCCCcCH
Confidence                   56999999999888776644   4899999999999887643221111111111222111      1224588


Q ss_pred             HHHHHHHHHhhcCCC--CCceEE
Q 021819          232 KDVAKAQVLLFESPA--ASGRYL  252 (307)
Q Consensus       232 ~dva~~~~~~~~~~~--~~g~~~  252 (307)
                      +|+|.+++.++..+.  ..|.++
T Consensus       204 ~~~a~~~~~l~~~~~~~~~g~~~  226 (234)
T PRK07577        204 EEVAAAIAFLLSDDAGFITGQVL  226 (234)
T ss_pred             HHHHHHHHHHhCcccCCccceEE
Confidence            999999999997653  346543

>PRK06196 oxidoreductase; Provisional

Probab=99.89  E-value=8.1e-22  Score=171.68  Aligned_cols=222  Identities=19%  Similarity=0.116  Sum_probs=146.8

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------C
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~   80 (307)
                      ++|+|+||||+|+||++++++|+++|+ +|++++|+.+..+.......    ++.++++|++|.++++++++       +
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~----~v~~~~~Dl~d~~~v~~~~~~~~~~~~~   99 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGID----GVEVVMLDLADLESVRAFAERFLDSGRR   99 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhh----hCeEEEccCCCHHHHHHHHHHHHhcCCC
Confidence            568999999999999999999999999 89999997654333221111    47789999999998887764       5


Q ss_pred             ccEEEEeccCCCC--CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCCCch
Q 021819           81 CKGVFHVASPCTL--EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (307)
Q Consensus        81 ~d~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~  154 (307)
                      +|+||||||....  ....+.++..+++|+.++.++++++    ++.+.+++|++||.........     .++.+...+
T Consensus       100 iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~-----~~~~~~~~~  174 (315)
T PRK06196        100 IDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIR-----WDDPHFTRG  174 (315)
T ss_pred             CCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCC-----ccccCccCC
Confidence            8999999997543  1223456788999999976666654    4555579999999654322111     111110000


Q ss_pred             hhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccH
Q 021819          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPV  231 (307)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  231 (307)
                       +  .....|+.+|.+.+.+.+.++++   .|+++++++||.|.++......... .............+   ...+.++
T Consensus       175 -~--~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~  247 (315)
T PRK06196        175 -Y--DKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREE-QVALGWVDEHGNPI---DPGFKTP  247 (315)
T ss_pred             -C--ChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhh-hhhhhhhhhhhhhh---hhhcCCH
Confidence             0  11246999999999888877654   4899999999999998654321100 00000000000000   0124688


Q ss_pred             HHHHHHHHHhhcCCC
Q 021819          232 KDVAKAQVLLFESPA  246 (307)
Q Consensus       232 ~dva~~~~~~~~~~~  246 (307)
                      +|+|..+++++..+.
T Consensus       248 ~~~a~~~~~l~~~~~  262 (315)
T PRK06196        248 AQGAATQVWAATSPQ  262 (315)
T ss_pred             hHHHHHHHHHhcCCc
Confidence            999999999987654

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.89  E-value=1e-21  Score=166.04  Aligned_cols=226  Identities=15%  Similarity=0.109  Sum_probs=152.1

Q ss_pred             cccCCcEEEEeCCc--hhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCC-CCCceEEEEcccCChhHHHHHhc--
Q 021819            5 AEKEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA-GDANLRVFEADVLDSGAVSRAVE--   79 (307)
Q Consensus         5 ~~~~~~~ilItGat--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~i~~D~~d~~~~~~~~~--   79 (307)
                      +.+++|+++||||+  ++||+++++.|+++|+ +|++..|+....+.+.++... ...++..+++|++|+++++++++  
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   81 (257)
T PRK08594          3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETI   81 (257)
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHH
Confidence            34567899999997  8999999999999999 888887754322222221110 01267889999999998887764  


Q ss_pred             -----CccEEEEeccCCCC--------CCCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCc
Q 021819           80 -----GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGK  144 (307)
Q Consensus        80 -----~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~  144 (307)
                           .+|++|||||....        +...+.+...+++|+.+...+++++...  ..++||++||..+..+.+..   
T Consensus        82 ~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~---  158 (257)
T PRK08594         82 KEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQNY---  158 (257)
T ss_pred             HHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCCCC---
Confidence                 47999999986531        1223345678899999998888877543  23689999997664333221   


Q ss_pred             ccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC
Q 021819          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ  221 (307)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  221 (307)
                                       ..|+.+|...+.+.+.++.+   .|+++++|.||.|.++....... ............    
T Consensus       159 -----------------~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~----  216 (257)
T PRK08594        159 -----------------NVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGG-FNSILKEIEERA----  216 (257)
T ss_pred             -----------------chhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhcc-ccHHHHHHhhcC----
Confidence                             46999999998888877754   48999999999998864221100 011111111111    


Q ss_pred             CCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCcc
Q 021819          222 EYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIY  258 (307)
Q Consensus       222 ~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~  258 (307)
                        ....+..++|+|+++++++...  ...|..+..++++
T Consensus       217 --p~~r~~~p~~va~~~~~l~s~~~~~~tG~~~~~dgg~  253 (257)
T PRK08594        217 --PLRRTTTQEEVGDTAAFLFSDLSRGVTGENIHVDSGY  253 (257)
T ss_pred             --CccccCCHHHHHHHHHHHcCcccccccceEEEECCch
Confidence              1234678999999999988643  3456655444443

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=1.2e-21  Score=165.59  Aligned_cols=214  Identities=14%  Similarity=0.111  Sum_probs=147.0

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC-CcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      +++|+++||||+|+||+++++.|+++|+ +|++..++... .+.+...      ++.++++|++|++++.++++      
T Consensus         5 l~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~------~~~~~~~Dl~~~~~~~~~~~~~~~~~   77 (255)
T PRK06463          5 FKGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREK------GVFTIKCDVGNRDQVKKSKEVVEKEF   77 (255)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhC------CCeEEEecCCCHHHHHHHHHHHHHHc
Confidence            3468999999999999999999999999 78777664332 2222211      46789999999999888775      


Q ss_pred             -CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHH----HHhcCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEA----AKRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                       ++|+||||||.....    ...+++...+++|+.++..+.+.    +++.+.+++|++||..+......          
T Consensus        78 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~----------  147 (255)
T PRK06463         78 GRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAE----------  147 (255)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCC----------
Confidence             579999999975421    12334678899999997665554    44455679999999665422111          


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCC--CcchHHHHHHHHcCCCCCCCCcc
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY--LNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                               ....|+.+|.+.+.+.+.++.+   .++++++++||.|.++.....  ...............      ..
T Consensus       148 ---------~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~------~~  212 (255)
T PRK06463        148 ---------GTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKT------VL  212 (255)
T ss_pred             ---------CccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCC------Cc
Confidence                     0146999999999999888765   489999999999977653221  001111111111211      13


Q ss_pred             cCcccHHHHHHHHHHhhcCCC--CCceEE
Q 021819          226 LGAVPVKDVAKAQVLLFESPA--ASGRYL  252 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~~--~~g~~~  252 (307)
                      ..+.+++|+|+++++++....  ..|..+
T Consensus       213 ~~~~~~~~va~~~~~l~s~~~~~~~G~~~  241 (255)
T PRK06463        213 KTTGKPEDIANIVLFLASDDARYITGQVI  241 (255)
T ss_pred             CCCcCHHHHHHHHHHHcChhhcCCCCCEE
Confidence            345789999999999886543  346543

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.89  E-value=5.7e-22  Score=165.70  Aligned_cols=199  Identities=20%  Similarity=0.171  Sum_probs=146.2

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      .+++|+||||+|+||++++++|+++|+ +|++++|++.....+.. +...  .++.++.+|++|.+++.++++       
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNK--GNVLGLAADVRDEADVQRAVDAIVAAFG   81 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhcc--CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            357999999999999999999999999 89999997654433221 2111  168899999999998887775       


Q ss_pred             CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh---cCCcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR---FGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      .+|+|||++|.....    ...+...+.+++|+.++.++++++.+   .+.+++|++||..+..+...            
T Consensus        82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~------------  149 (237)
T PRK07326         82 GLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAG------------  149 (237)
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCC------------
Confidence            689999999875432    12234567899999999999998864   24578999999665332222            


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcc
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (307)
                              ...|+.+|...+.+.+.++.+   .+++++++||+.+.++.......            .      .....+
T Consensus       150 --------~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~------------~------~~~~~~  203 (237)
T PRK07326        150 --------GAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPS------------E------KDAWKI  203 (237)
T ss_pred             --------CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccc------------h------hhhccC
Confidence                    146999999988888776533   58999999999987764322100            0      001137


Q ss_pred             cHHHHHHHHHHhhcCCCC
Q 021819          230 PVKDVAKAQVLLFESPAA  247 (307)
Q Consensus       230 ~~~dva~~~~~~~~~~~~  247 (307)
                      .++|+++.+++++..+..
T Consensus       204 ~~~d~a~~~~~~l~~~~~  221 (237)
T PRK07326        204 QPEDIAQLVLDLLKMPPR  221 (237)
T ss_pred             CHHHHHHHHHHHHhCCcc
Confidence            899999999999987753

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.89  E-value=1.1e-21  Score=167.13  Aligned_cols=223  Identities=14%  Similarity=0.095  Sum_probs=150.7

Q ss_pred             cCCcEEEEeCCch--hhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            7 KEEETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         7 ~~~~~ilItGatG--~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      +++|+++||||++  +||+++++.|+++|+ +|++.+|+....+.+..+..... ....+++|++|.++++++++     
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g-~~~~~~~Dv~d~~~v~~~~~~~~~~   82 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLG-SDFVLPCDVEDIASVDAVFEALEKK   82 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcC-CceEEeCCCCCHHHHHHHHHHHHHH
Confidence            3478999999997  999999999999999 88888876432222222211111 23478899999998887765     


Q ss_pred             --CccEEEEeccCCCC--------CCCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcccc
Q 021819           80 --GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        80 --~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                        .+|++|||||....        +...+++.+.+++|+.++.++++++...  ..+++|++||.++..+.+..      
T Consensus        83 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~~~------  156 (271)
T PRK06505         83 WGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMPNY------  156 (271)
T ss_pred             hCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCCcc------
Confidence              57999999997531        2234557888999999999988877532  12689999997654433322      


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCc
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (307)
                                    ..|+.+|...+.+.+.++.+   .|+++++|.||.|.++....... ............+      
T Consensus       157 --------------~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~-~~~~~~~~~~~~p------  215 (271)
T PRK06505        157 --------------NVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGD-ARAIFSYQQRNSP------  215 (271)
T ss_pred             --------------chhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcc-hHHHHHHHhhcCC------
Confidence                          46888888888888777665   48999999999998875321111 0111111111111      


Q ss_pred             ccCcccHHHHHHHHHHhhcCC--CCCceEEecCCcc
Q 021819          225 WLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIY  258 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~  258 (307)
                      ...+..++|+|+++++++...  ...|..+..++++
T Consensus       216 ~~r~~~peeva~~~~fL~s~~~~~itG~~i~vdgG~  251 (271)
T PRK06505        216 LRRTVTIDEVGGSALYLLSDLSSGVTGEIHFVDSGY  251 (271)
T ss_pred             ccccCCHHHHHHHHHHHhCccccccCceEEeecCCc
Confidence            223568999999999988643  2346665555443

>PRK12743 oxidoreductase; Provisional

Probab=99.89  E-value=5.4e-22  Score=167.81  Aligned_cols=218  Identities=19%  Similarity=0.193  Sum_probs=150.9

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCC-CCcccc-cCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~-~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +++++||||+|+||++++++|+++|+ +|+.+.++.. ..+.+. .+...+ .++.++.+|++|+++++++++       
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHG-VRAEIRQLDLSDLPEGAQALDKLIQRLG   79 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcC-CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            56999999999999999999999999 8877765432 222221 111111 168899999999988877765       


Q ss_pred             CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc----C-CcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                      .+|+|||++|.....    ...+.+.+.+.+|+.++.++++++.+.    + .+++|++||..+..+.++.         
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~---------  150 (256)
T PRK12743         80 RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGA---------  150 (256)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCc---------
Confidence            479999999975432    123456788999999999999987543    2 3589999996654332221         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                                 ..|+.+|...+.+++.++.+   .+++++.++||.++++......   ...........+      ...
T Consensus       151 -----------~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~---~~~~~~~~~~~~------~~~  210 (256)
T PRK12743        151 -----------SAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDD---SDVKPDSRPGIP------LGR  210 (256)
T ss_pred             -----------chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccC---hHHHHHHHhcCC------CCC
Confidence                       57999999999888877764   4899999999999998643211   111111111111      123


Q ss_pred             cccHHHHHHHHHHhhcCCC--CCceEEecCCc
Q 021819          228 AVPVKDVAKAQVLLFESPA--ASGRYLCTNGI  257 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~~--~~g~~~~~~~~  257 (307)
                      +.+++|++.++++++....  ..|.++..+++
T Consensus       211 ~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  242 (256)
T PRK12743        211 PGDTHEIASLVAWLCSEGASYTTGQSLIVDGG  242 (256)
T ss_pred             CCCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence            5689999999998886543  34665544443

>TIGR02415 23BDH acetoin reductases

Probab=99.89  E-value=5.7e-22  Score=167.43  Aligned_cols=221  Identities=19%  Similarity=0.211  Sum_probs=153.8

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCCCCCceEEEEcccCChhHHHHHhc-------Cc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~~   81 (307)
                      |+++||||+|+||+++++.|++.|+ +|+++.|+....+.+. .+..... ++.++.+|++|++++.++++       .+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   78 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGG-KAVAYKLDVSDKDQVFSAIDQAAEKFGGF   78 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4799999999999999999999999 8999988754332221 1111111 67889999999998887764       46


Q ss_pred             cEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cC-CcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           82 KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        82 d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      |+|||++|.....    ...+.+.+.+++|+.++..+++++.+    .+ .+++|++||..+.++.+..           
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-----------  147 (254)
T TIGR02415        79 DVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPIL-----------  147 (254)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCC-----------
Confidence            9999999975432    22334578899999999888777643    23 3689999997776654442           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcch--------HHHHHHHHcCCCCCC
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNAS--------CAVLQQLLQGSKDTQ  221 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~--------~~~~~~~~~~~~~~~  221 (307)
                               ..|+.+|...+.+++.++.+.   ++++++++||.+.++.........        ...........    
T Consensus       148 ---------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  214 (254)
T TIGR02415       148 ---------SAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEI----  214 (254)
T ss_pred             ---------cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhC----
Confidence                     679999999999988776663   799999999999776532110000        00001111100    


Q ss_pred             CCcccCcccHHHHHHHHHHhhcCCC--CCceEEecCCcc
Q 021819          222 EYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIY  258 (307)
Q Consensus       222 ~~~~~~~i~~~dva~~~~~~~~~~~--~~g~~~~~~~~~  258 (307)
                        ....+.+++|+++++.+++....  ..|.++..+++.
T Consensus       215 --~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g~  251 (254)
T TIGR02415       215 --ALGRPSEPEDVAGLVSFLASEDSDYITGQSILVDGGM  251 (254)
T ss_pred             --CCCCCCCHHHHHHHHHhhcccccCCccCcEEEecCCc
Confidence              12347899999999999998754  347666555443

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.89  E-value=2.8e-22  Score=158.08  Aligned_cols=265  Identities=17%  Similarity=0.176  Sum_probs=193.2

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHC-CCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGV   84 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~v   84 (307)
                      +..+|+|||+-|.+|..+++.|..+ |...|+..+..++....+.        .=.++..|+.|...+++++-  .+|++
T Consensus        43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~~--------~GPyIy~DILD~K~L~eIVVn~RIdWL  114 (366)
T KOG2774|consen   43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVTD--------VGPYIYLDILDQKSLEEIVVNKRIDWL  114 (366)
T ss_pred             CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhcc--------cCCchhhhhhccccHHHhhccccccee
Confidence            3579999999999999999999877 7656776655444433322        22478899999999999874  68999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccH
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (307)
                      ||..+..+.-. +..-.....+|+.|..|+++.+++++.+ +..-||++++++....  .|-..-+      -..+...|
T Consensus       115 ~HfSALLSAvG-E~NVpLA~~VNI~GvHNil~vAa~~kL~-iFVPSTIGAFGPtSPR--NPTPdlt------IQRPRTIY  184 (366)
T KOG2774|consen  115 VHFSALLSAVG-ETNVPLALQVNIRGVHNILQVAAKHKLK-VFVPSTIGAFGPTSPR--NPTPDLT------IQRPRTIY  184 (366)
T ss_pred             eeHHHHHHHhc-ccCCceeeeecchhhhHHHHHHHHcCee-EeecccccccCCCCCC--CCCCCee------eecCceee
Confidence            99887544311 2223467789999999999999999875 4455888887765332  1111111      12334789


Q ss_pred             HHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC--CcchHHHH-HHHHcCCCC--CCCCcccCcccHHHHHHHHH
Q 021819          165 PVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY--LNASCAVL-QQLLQGSKD--TQEYHWLGAVPVKDVAKAQV  239 (307)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~--~~~~~~~~-~~~~~~~~~--~~~~~~~~~i~~~dva~~~~  239 (307)
                      |.||..+|-+.+.+.+++|+++-++|.+.+......+.  .......+ .....|+..  .-++....+++.+||-.+++
T Consensus       185 GVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~  264 (366)
T KOG2774|consen  185 GVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVI  264 (366)
T ss_pred             chhHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHH
Confidence            99999999999999999999999999888776433222  22233333 344445433  23788899999999999999


Q ss_pred             HhhcCCCCC---ceEEecCCcccHHHHHHHHHHhCCCCCCCccccCCchHHHHH
Q 021819          240 LLFESPAAS---GRYLCTNGIYQFGDFAERVSKLFPEFPVHRFVFQSPLRFILW  290 (307)
Q Consensus       240 ~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      .++..+...   .+||+++-.++-+|+++.+.+..|+.++.+.+.+.-.-.-.|
T Consensus       265 ~~~~a~~~~lkrr~ynvt~~sftpee~~~~~~~~~p~~~i~y~~~srq~iad~w  318 (366)
T KOG2774|consen  265 QLLAADSQSLKRRTYNVTGFSFTPEEIADAIRRVMPGFEIDYDICTRQSIADSW  318 (366)
T ss_pred             HHHhCCHHHhhhheeeeceeccCHHHHHHHHHhhCCCceeecccchhhhhhhhc
Confidence            999876543   369999999999999999999999999888776544444444

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.89  E-value=1.9e-21  Score=162.40  Aligned_cols=211  Identities=20%  Similarity=0.147  Sum_probs=149.1

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCc-ccccCCCCCCCceEEEEcccCChhHHHHHhc-------C
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS-HLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~   80 (307)
                      +|+++||||+|+||+++++.|+++|+ +|++++|++.... .+...      ++.++.+|++|.++++++++       +
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~~~~   74 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQA------GAQCIQADFSTNAGIMAFIDELKQHTDG   74 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHc------CCEEEEcCCCCHHHHHHHHHHHHhhCCC
Confidence            46899999999999999999999999 8999998764321 11111      46788999999988877664       4


Q ss_pred             ccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cC--CcEEEEecCcceeccCCCCCCcccccCC
Q 021819           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FG--VRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        81 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                      +|++|||||.....    ...+++.+.+++|+.++..+.+.+..    .+  .+++|++||..+..+.+..         
T Consensus        75 id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~---------  145 (236)
T PRK06483         75 LRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKH---------  145 (236)
T ss_pred             ccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCC---------
Confidence            79999999974332    12345688999999999887777643    23  4689999986553332221         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHhc--CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCc
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (307)
                                 ..|+.+|...+.+.+.++.+.  ++++++|+||.+..+....     ...........+      ...+
T Consensus       146 -----------~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~-----~~~~~~~~~~~~------~~~~  203 (236)
T PRK06483        146 -----------IAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDD-----AAYRQKALAKSL------LKIE  203 (236)
T ss_pred             -----------ccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCC-----HHHHHHHhccCc------cccC
Confidence                       579999999999999888774  6999999999886543211     111122222111      1224


Q ss_pred             ccHHHHHHHHHHhhcCCCCCceEEecCCc
Q 021819          229 VPVKDVAKAQVLLFESPAASGRYLCTNGI  257 (307)
Q Consensus       229 i~~~dva~~~~~~~~~~~~~g~~~~~~~~  257 (307)
                      ..++|+|+++.+++.+....|..+..+++
T Consensus       204 ~~~~~va~~~~~l~~~~~~~G~~i~vdgg  232 (236)
T PRK06483        204 PGEEEIIDLVDYLLTSCYVTGRSLPVDGG  232 (236)
T ss_pred             CCHHHHHHHHHHHhcCCCcCCcEEEeCcc
Confidence            57899999999999765566765444443

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.89  E-value=3.9e-22  Score=169.25  Aligned_cols=224  Identities=20%  Similarity=0.130  Sum_probs=154.5

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+....   ..++..+++|++|.+++.++++       
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAH---GDAVVGVEGDVRSLDDHKEAVARCVAAFG   78 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhc---CCceEEEEeccCCHHHHHHHHHHHHHHhC
Confidence            3578999999999999999999999999 8999988765443332211   1157889999999988777664       


Q ss_pred             CccEEEEeccCCCC-----CCCC----ChhhhhhhhhHHHHHHHHHHHHhc---CCcEEEEecCcceeccCCCCCCcccc
Q 021819           80 GCKGVFHVASPCTL-----EDPV----DPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        80 ~~d~vi~~a~~~~~-----~~~~----~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                      .+|++|||||....     ....    +.+.+.+++|+.++.++++++.+.   ..+++|++||..+..+.+..      
T Consensus        79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~------  152 (262)
T TIGR03325        79 KIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGGG------  152 (262)
T ss_pred             CCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCCCC------
Confidence            57999999986421     1111    245789999999999999998553   22579999987765443332      


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc--CCcEEEEecCceeCCCCCCCCcch-HH-----HHHHHHcCCCC
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNAS-CA-----VLQQLLQGSKD  219 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~i~~~ivrp~~v~g~~~~~~~~~~-~~-----~~~~~~~~~~~  219 (307)
                                    ..|+.+|...+.+.+.++.+.  .++++.|+||.+.++......... ..     .........  
T Consensus       153 --------------~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--  216 (262)
T TIGR03325       153 --------------PLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSV--  216 (262)
T ss_pred             --------------chhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhc--
Confidence                          469999999999999888774  489999999999887543210000 00     001111111  


Q ss_pred             CCCCcccCcccHHHHHHHHHHhhcCCC---CCceEEecCCccc
Q 021819          220 TQEYHWLGAVPVKDVAKAQVLLFESPA---ASGRYLCTNGIYQ  259 (307)
Q Consensus       220 ~~~~~~~~~i~~~dva~~~~~~~~~~~---~~g~~~~~~~~~~  259 (307)
                       .  ....+..++|+|+++++++..+.   ..|..+..++++.
T Consensus       217 -~--p~~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg~~  256 (262)
T TIGR03325       217 -L--PIGRMPDAEEYTGAYVFFATRGDTVPATGAVLNYDGGMG  256 (262)
T ss_pred             -C--CCCCCCChHHhhhheeeeecCCCcccccceEEEecCCee
Confidence             0  12346789999999988886532   3465554454443

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.89  E-value=1.9e-21  Score=164.65  Aligned_cols=223  Identities=14%  Similarity=0.093  Sum_probs=151.1

Q ss_pred             cCCcEEEEeCCch--hhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            7 KEEETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         7 ~~~~~ilItGatG--~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      .++|+++||||++  +||+++++.|+++|+ +|+..+|+....+.++.+..... .+..+.+|++|+++++++++     
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLG-SDIVLPCDVAEDASIDAMFAELGKV   81 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccC-CceEeecCCCCHHHHHHHHHHHHhh
Confidence            4578999999985  999999999999999 88887776321222222222112 45678899999999888775     


Q ss_pred             --CccEEEEeccCCCCC---------CCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCccc
Q 021819           80 --GCKGVFHVASPCTLE---------DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVF  146 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~  146 (307)
                        .+|++|||||.....         ...+.+...+++|+.+...+.+++...  ..+++|++||.++..+.+..     
T Consensus        82 ~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~~~-----  156 (262)
T PRK07984         82 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNY-----  156 (262)
T ss_pred             cCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCc-----
Confidence              479999999975321         122345678899999998888887432  22689999987654332221     


Q ss_pred             ccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCC
Q 021819          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (307)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (307)
                                     ..|+.+|...+.+.+.++.+   .++++++|.||.|.++....... ............      
T Consensus       157 ---------------~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~-~~~~~~~~~~~~------  214 (262)
T PRK07984        157 ---------------NVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKD-FRKMLAHCEAVT------  214 (262)
T ss_pred             ---------------chhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCc-hHHHHHHHHHcC------
Confidence                           56999999999998888765   48999999999998764221111 111222211111      


Q ss_pred             cccCcccHHHHHHHHHHhhcCC--CCCceEEecCCcc
Q 021819          224 HWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIY  258 (307)
Q Consensus       224 ~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~  258 (307)
                      ....+..++|+++++++++...  ...|..+..++++
T Consensus       215 p~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgg~  251 (262)
T PRK07984        215 PIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGF  251 (262)
T ss_pred             CCcCCCCHHHHHHHHHHHcCcccccccCcEEEECCCc
Confidence            1234679999999999988753  3446655555443

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.7e-21  Score=164.71  Aligned_cols=208  Identities=17%  Similarity=0.122  Sum_probs=143.8

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +++++|+||||+|+||++++++|+++|+ +|++++|+....+......     ...++++|++|+++++++++       
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~   78 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEV-----GGLFVPTDVTDEDAVNALFDTAAETYG   78 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHc-----CCcEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            3478999999999999999999999999 8999998765433222111     23578899999998888776       


Q ss_pred             CccEEEEeccCCCCC------CCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 GCKGVFHVASPCTLE------DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                      ++|+|||+||.....      ...+.++..+++|+.++.++++.+.    +.+.+++|++||..+.++....        
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~--------  150 (255)
T PRK06057         79 SVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATS--------  150 (255)
T ss_pred             CCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCC--------
Confidence            579999999875321      1223457889999999988877763    3455689999986654443210        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                                 ...|+.+|...+.+.+.++.+   .++++++++||.+.++..............+....    .+  ..
T Consensus       151 -----------~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~----~~--~~  213 (255)
T PRK06057        151 -----------QISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVH----VP--MG  213 (255)
T ss_pred             -----------CcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhc----CC--CC
Confidence                       146999998777776655433   48999999999999886432211111111111111    11  22


Q ss_pred             CcccHHHHHHHHHHhhcCC
Q 021819          227 GAVPVKDVAKAQVLLFESP  245 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~  245 (307)
                      .+.+++|+++++++++...
T Consensus       214 ~~~~~~~~a~~~~~l~~~~  232 (255)
T PRK06057        214 RFAEPEEIAAAVAFLASDD  232 (255)
T ss_pred             CCcCHHHHHHHHHHHhCcc
Confidence            5789999999988888653

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.3e-21  Score=164.93  Aligned_cols=197  Identities=15%  Similarity=0.159  Sum_probs=139.8

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCC-CCeEEEEeCCCCC-Cccc-ccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSD-SSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~-~~~~-~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      .++|+||||+|+||++++++|+++| + +|++++|+.+. .+.+ +.+......+++++++|++|++++.++++      
T Consensus         8 ~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g   86 (253)
T PRK07904          8 PQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG   86 (253)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence            5689999999999999999999995 7 89999997664 3222 11211111268899999999888665554      


Q ss_pred             CccEEEEeccCCCCC-CCCCh---hhhhhhhhHHHHHH----HHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 GCKGVFHVASPCTLE-DPVDP---EKELILPAVQGTLN----VLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~-~~~~~---~~~~~~~n~~~~~~----l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                      ++|++||++|..... ....+   ..+.+++|+.++.+    +++.+++.+.++||++||..+..+.+..          
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~----------  156 (253)
T PRK07904         87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSN----------  156 (253)
T ss_pred             CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCC----------
Confidence            689999999875431 11111   13568999988876    5556677777899999997653322221          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHH---hcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (307)
                                ..|+.+|.+.+.+.+.++.   .+++++++++||.+.++.....            ..        ....
T Consensus       157 ----------~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~------------~~--------~~~~  206 (253)
T PRK07904        157 ----------FVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHA------------KE--------APLT  206 (253)
T ss_pred             ----------cchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccC------------CC--------CCCC
Confidence                      4699999998877666543   3589999999999988643211            00        1124


Q ss_pred             ccHHHHHHHHHHhhcCCC
Q 021819          229 VPVKDVAKAQVLLFESPA  246 (307)
Q Consensus       229 i~~~dva~~~~~~~~~~~  246 (307)
                      ++++|+|+.++..++++.
T Consensus       207 ~~~~~~A~~i~~~~~~~~  224 (253)
T PRK07904        207 VDKEDVAKLAVTAVAKGK  224 (253)
T ss_pred             CCHHHHHHHHHHHHHcCC
Confidence            789999999999998654

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1e-21  Score=167.68  Aligned_cols=215  Identities=22%  Similarity=0.233  Sum_probs=149.4

Q ss_pred             cccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccc--------ccCCCCCCCceEEEEcccCChhHHHH
Q 021819            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL--------FALPGAGDANLRVFEADVLDSGAVSR   76 (307)
Q Consensus         5 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~i~~D~~d~~~~~~   76 (307)
                      +..++|+++||||+|+||+++++.|+++|+ +|++++|+.+....+        ..+...+. ++.++++|++|++++.+
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~D~~~~~~i~~   79 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGG-QALPLVGDVRDEDQVAA   79 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccccccchhhHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHH
Confidence            334568999999999999999999999999 899999865432111        11111112 67889999999998887


Q ss_pred             Hhc-------CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCC
Q 021819           77 AVE-------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGW  141 (307)
Q Consensus        77 ~~~-------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~  141 (307)
                      +++       ++|+|||+||.....    ...+++++.+++|+.++.++++++..    .+.+++|++||.....+.   
T Consensus        80 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~---  156 (273)
T PRK08278         80 AVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPK---  156 (273)
T ss_pred             HHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcccc---
Confidence            765       579999999975432    12234577899999999999999854    334689999985432211   


Q ss_pred             CCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCc-eeCCCCCCCCcchHHHHHHHHcCC
Q 021819          142 KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPAT-CLGPLMQPYLNASCAVLQQLLQGS  217 (307)
Q Consensus       142 ~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~-v~g~~~~~~~~~~~~~~~~~~~~~  217 (307)
                               +. +     ....|+.+|.+.+.+++.++.+.   +++++.+.|+. +.++...           ....+.
T Consensus       157 ---------~~-~-----~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~-----------~~~~~~  210 (273)
T PRK08278        157 ---------WF-A-----PHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVR-----------NLLGGD  210 (273)
T ss_pred             ---------cc-C-----CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHH-----------hccccc
Confidence                     00 0     11579999999999999887764   89999999984 4443211           110111


Q ss_pred             CCCCCCcccCcccHHHHHHHHHHhhcCCC--CCceEEecC
Q 021819          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTN  255 (307)
Q Consensus       218 ~~~~~~~~~~~i~~~dva~~~~~~~~~~~--~~g~~~~~~  255 (307)
                           .....+..++|+|+.+++++....  ..|.++..+
T Consensus       211 -----~~~~~~~~p~~va~~~~~l~~~~~~~~~G~~~~~~  245 (273)
T PRK08278        211 -----EAMRRSRTPEIMADAAYEILSRPAREFTGNFLIDE  245 (273)
T ss_pred             -----ccccccCCHHHHHHHHHHHhcCccccceeEEEecc
Confidence                 012346799999999999887643  346665533

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.89  E-value=6.6e-22  Score=164.58  Aligned_cols=215  Identities=19%  Similarity=0.138  Sum_probs=152.6

Q ss_pred             EEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcC---ccEEEEecc
Q 021819           13 CVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG---CKGVFHVAS   89 (307)
Q Consensus        13 lItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~---~d~vi~~a~   89 (307)
                      +||||+|+||+++++.|+++|+ +|++++|+....+......... .+++++.+|++|++++.++++.   +|++||++|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag   78 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGA-RVTIASRSRDRLAAAARALGGG-APVRTAALDITDEAAVDAFFAEAGPFDHVVITAA   78 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcC-CceEEEEccCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            5999999999999999999999 8999999754433222111111 2688999999999999998874   799999999


Q ss_pred             CCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHH
Q 021819           90 PCTLE----DPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (307)
Q Consensus        90 ~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (307)
                      .....    ...+++.+.+++|+.++.++.++....+.++||++||..+..+.+..                    ..|+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~~~~--------------------~~Y~  138 (230)
T PRK07041         79 DTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPSASG--------------------VLQG  138 (230)
T ss_pred             CCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCCCcc--------------------hHHH
Confidence            75432    12345688999999999999996655556899999997764443322                    5699


Q ss_pred             HHHHHHHHHHHHHHHhc-CCcEEEEecCceeCCCCCCCCc-chHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhc
Q 021819          166 VSKTLAEKAAWEFAEKH-GVDVVAIHPATCLGPLMQPYLN-ASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE  243 (307)
Q Consensus       166 ~sK~~~e~~~~~~~~~~-~i~~~ivrp~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~  243 (307)
                      .+|.+.+.+.+.++.+. ++++++++|+.+.++....... ....+........+      ......++|+|+++++++.
T Consensus       139 ~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~~~~l~~  212 (230)
T PRK07041        139 AINAALEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLP------ARRVGQPEDVANAILFLAA  212 (230)
T ss_pred             HHHHHHHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhc
Confidence            99999999998887664 6899999999987765321100 11112222222111      1234578999999999998


Q ss_pred             CCCCCce-EEecC
Q 021819          244 SPAASGR-YLCTN  255 (307)
Q Consensus       244 ~~~~~g~-~~~~~  255 (307)
                      ++...|. |++.+
T Consensus       213 ~~~~~G~~~~v~g  225 (230)
T PRK07041        213 NGFTTGSTVLVDG  225 (230)
T ss_pred             CCCcCCcEEEeCC
Confidence            7655564 55443

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.89  E-value=1e-21  Score=165.17  Aligned_cols=215  Identities=17%  Similarity=0.156  Sum_probs=145.5

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEE-eCCCCCCcccc-cCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      |++++||||+|+||+++++.|+++|+ +|++. .|+....+... .+..... ++..+++|++|+++++++++       
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~d~~~i~~~~~~~~~~~~   78 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGY-TVAVNYQQNLHAAQEVVNLITQAGG-KAFVLQADISDENQVVAMFTAIDQHDE   78 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhCCC-eEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999 77664 45433222111 1111111 57889999999999888776       


Q ss_pred             CccEEEEeccCCCCC-----CCCChhhhhhhhhHHHHHHHHHHHHhc-------CCcEEEEecCcceeccCCCCCCcccc
Q 021819           80 GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAKRF-------GVRRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~-------~~~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                      ++|+|||++|.....     ...+.+...+++|+.++.++++++...       +.++||++||..++++.+..      
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~------  152 (247)
T PRK09730         79 PLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGE------  152 (247)
T ss_pred             CCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCc------
Confidence            358999999975321     122235688999999998888776432       13579999997765543321      


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCc
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (307)
                                   ...|+.+|...+.+++.++.+   .+++++++||+.++|+......  ............+      
T Consensus       153 -------------~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~--~~~~~~~~~~~~~------  211 (247)
T PRK09730        153 -------------YVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGG--EPGRVDRVKSNIP------  211 (247)
T ss_pred             -------------ccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCC--CHHHHHHHHhcCC------
Confidence                         035999999999888776654   4899999999999998643221  1122222222221      


Q ss_pred             ccCcccHHHHHHHHHHhhcCCC--CCceEE
Q 021819          225 WLGAVPVKDVAKAQVLLFESPA--ASGRYL  252 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~~--~~g~~~  252 (307)
                      .....+++|+|+++++++..+.  ..|.++
T Consensus       212 ~~~~~~~~dva~~~~~~~~~~~~~~~g~~~  241 (247)
T PRK09730        212 MQRGGQPEEVAQAIVWLLSDKASYVTGSFI  241 (247)
T ss_pred             CCCCcCHHHHHHHHHhhcChhhcCccCcEE
Confidence            1123488999999998887542  335443

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.89  E-value=6.7e-22  Score=165.92  Aligned_cols=197  Identities=14%  Similarity=0.089  Sum_probs=145.3

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc----CccE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE----GCKG   83 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~----~~d~   83 (307)
                      ||+++||||+|+||+++++.|+++|+ +|++++|+++..+.... +......++.++++|++|+++++++++    .+|+
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~   79 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDI   79 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCE
Confidence            56899999999999999999999999 89999997654432211 111111268899999999998888765    4699


Q ss_pred             EEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcccccCCCCchh
Q 021819           84 VFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (307)
Q Consensus        84 vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~  155 (307)
                      +||++|......    ..++..+.+++|+.++.++++++..    .+.+++|++||..+..+.+..              
T Consensus        80 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--------------  145 (243)
T PRK07102         80 VLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASN--------------  145 (243)
T ss_pred             EEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCC--------------
Confidence            999998654321    2223457889999999999988754    456799999997654443221              


Q ss_pred             hhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHH
Q 021819          156 YCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK  232 (307)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  232 (307)
                            ..|+.+|...+.+.+.++.+   .|+++++++|+.++++......                 .  ....+.+++
T Consensus       146 ------~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~-----------------~--~~~~~~~~~  200 (243)
T PRK07102        146 ------YVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLK-----------------L--PGPLTAQPE  200 (243)
T ss_pred             ------cccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhccC-----------------C--CccccCCHH
Confidence                  46999999999888877543   4899999999999887432110                 0  012356899


Q ss_pred             HHHHHHHHhhcCC
Q 021819          233 DVAKAQVLLFESP  245 (307)
Q Consensus       233 dva~~~~~~~~~~  245 (307)
                      |+++.++..++++
T Consensus       201 ~~a~~i~~~~~~~  213 (243)
T PRK07102        201 EVAKDIFRAIEKG  213 (243)
T ss_pred             HHHHHHHHHHhCC
Confidence            9999999998865

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.89  E-value=9.6e-22  Score=167.57  Aligned_cols=222  Identities=13%  Similarity=0.102  Sum_probs=149.3

Q ss_pred             CCcEEEEeCCc--hhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            8 EEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         8 ~~~~ilItGat--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ++|+++||||+  ++||+++++.|+++|+ +|++.+|+....+.+..+....... ..+++|++|.+++.++++      
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~   81 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKDL   81 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHc
Confidence            46899999997  7999999999999999 8888888642222222221111113 578899999998887765      


Q ss_pred             -CccEEEEeccCCCC--------CCCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 -GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 -~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                       .+|++|||||....        +...+++.+.+++|+.++..+.+++...  ..++||++||.++..+.+..       
T Consensus        82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~~~-------  154 (274)
T PRK08415         82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVPHY-------  154 (274)
T ss_pred             CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCCcc-------
Confidence             47999999997431        1223456889999999999998887543  12589999997654333221       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                                   ..|+.+|...+.+.+.++.+   .|+++++|.||.|.++....... ... ........   .  ..
T Consensus       155 -------------~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~-~~~-~~~~~~~~---~--pl  214 (274)
T PRK08415        155 -------------NVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGD-FRM-ILKWNEIN---A--PL  214 (274)
T ss_pred             -------------hhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccch-hhH-Hhhhhhhh---C--ch
Confidence                         46888888888887777654   48999999999998864321100 000 00100000   0  12


Q ss_pred             cCcccHHHHHHHHHHhhcCC--CCCceEEecCCcc
Q 021819          226 LGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIY  258 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~  258 (307)
                      ..+..++|+|+++++++...  ...|..+..++++
T Consensus       215 ~r~~~pedva~~v~fL~s~~~~~itG~~i~vdGG~  249 (274)
T PRK08415        215 KKNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDAGY  249 (274)
T ss_pred             hccCCHHHHHHHHHHHhhhhhhcccccEEEEcCcc
Confidence            33578999999999998743  3457666555554

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.89  E-value=1.2e-21  Score=162.92  Aligned_cols=221  Identities=20%  Similarity=0.181  Sum_probs=154.2

Q ss_pred             cccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccc-ccCCCCCCC-ceEEEEcccCChhHHHHHhc-
Q 021819            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGAGDA-NLRVFEADVLDSGAVSRAVE-   79 (307)
Q Consensus         3 ~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~-~~~~~~~~~-~~~~i~~D~~d~~~~~~~~~-   79 (307)
                      .|.+.++|+|+|||||.+||.+++.+|.++|. +++.+.|+....+.. .++.+.... ++..+++|++|.++++++++ 
T Consensus         6 ~~e~~~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~   84 (282)
T KOG1205|consen    6 FMERLAGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEW   84 (282)
T ss_pred             cHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHH
Confidence            35567789999999999999999999999999 788888877666655 222111111 58999999999999987764 


Q ss_pred             ------CccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcc
Q 021819           80 ------GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKV  145 (307)
Q Consensus        80 ------~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~  145 (307)
                            ++|++|||||......    ..++....+++|+.|+..+.+++    ++.+-+|||.+||+++..+.+..    
T Consensus        85 ~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~----  160 (282)
T KOG1205|consen   85 AIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFR----  160 (282)
T ss_pred             HHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcc----
Confidence                  6899999999876421    22234679999999999998887    34455799999998887665553    


Q ss_pred             cccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEE-EEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC
Q 021819          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVV-AIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ  221 (307)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~-ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  221 (307)
                                      ..|..||++.+.+.+.+..+.   +..+. ++.||.|-+.......           .+.... 
T Consensus       161 ----------------~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te~~~~~~-----------~~~~~~-  212 (282)
T KOG1205|consen  161 ----------------SIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETEFTGKEL-----------LGEEGK-  212 (282)
T ss_pred             ----------------cccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeecccchhh-----------cccccc-
Confidence                            479999999999998887775   22222 5899999776433220           000000 


Q ss_pred             CCcccCcccHHHHHH--HHHHhhcCCCCCce--EEecCCc
Q 021819          222 EYHWLGAVPVKDVAK--AQVLLFESPAASGR--YLCTNGI  257 (307)
Q Consensus       222 ~~~~~~~i~~~dva~--~~~~~~~~~~~~g~--~~~~~~~  257 (307)
                       .........+|++.  .+...+..+...+.  +...+..
T Consensus       213 -~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~  251 (282)
T KOG1205|consen  213 -SQQGPFLRTEDVADPEAVAYAISTPPCRQVEDIIIAPSW  251 (282)
T ss_pred             -ccccchhhhhhhhhHHHHHHHHhcCcccchhheeecccc
Confidence             12233445566654  77777776665543  5554443

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.89  E-value=1.8e-21  Score=164.76  Aligned_cols=224  Identities=13%  Similarity=0.130  Sum_probs=152.1

Q ss_pred             ccCCcEEEEeCCc--hhhHHHHHHHHHHCCCCeEEEEeCCCCCC---cccccCCCCCCCceEEEEcccCChhHHHHHhc-
Q 021819            6 EKEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDS---SHLFALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (307)
Q Consensus         6 ~~~~~~ilItGat--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-   79 (307)
                      .+++|+++||||+  ++||++++++|+++|+ +|+...|+.+..   +.+.++..... .+.++++|++|++++.++++ 
T Consensus         3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~v~~~~~~   80 (258)
T PRK07370          3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLN-PSLFLPCDVQDDAQIEETFET   80 (258)
T ss_pred             ccCCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccC-cceEeecCcCCHHHHHHHHHH
Confidence            3457899999986  8999999999999999 887776643321   12222211111 46788999999999887765 


Q ss_pred             ------CccEEEEeccCCCC--------CCCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCC
Q 021819           80 ------GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKG  143 (307)
Q Consensus        80 ------~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~  143 (307)
                            .+|++|||||....        ....+++++.+++|+.++..+.+++...  ..++||++||..+..+.+..  
T Consensus        81 ~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~--  158 (258)
T PRK07370         81 IKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIPNY--  158 (258)
T ss_pred             HHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCCccc--
Confidence                  57999999996531        1223456889999999999998887432  12689999997654332221  


Q ss_pred             cccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCC
Q 021819          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT  220 (307)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  220 (307)
                                        ..|+.+|.+.+.+.+.++.+   .|++++++.||.|.++....... ............   
T Consensus       159 ------------------~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~-~~~~~~~~~~~~---  216 (258)
T PRK07370        159 ------------------NVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGG-ILDMIHHVEEKA---  216 (258)
T ss_pred             ------------------chhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhcccc-chhhhhhhhhcC---
Confidence                              56999999999988888765   47999999999998875321110 111122211111   


Q ss_pred             CCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCcc
Q 021819          221 QEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIY  258 (307)
Q Consensus       221 ~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~  258 (307)
                         ....+..++|++.++.+++...  ...|..+..++++
T Consensus       217 ---p~~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vdgg~  253 (258)
T PRK07370        217 ---PLRRTVTQTEVGNTAAFLLSDLASGITGQTIYVDAGY  253 (258)
T ss_pred             ---CcCcCCCHHHHHHHHHHHhChhhccccCcEEEECCcc
Confidence               1234678899999999988643  2346555444443

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=1.9e-21  Score=164.03  Aligned_cols=217  Identities=17%  Similarity=0.154  Sum_probs=151.3

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +++++++||||+|+||+++++.|+++|+ +|++++|+..+.+...........++.++++|++|.++++++++       
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFG   81 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4567999999999999999999999999 89999987654332222111111267889999999988776655       


Q ss_pred             CccEEEEeccCCCCC-------------CCCChhhhhhhhhHHHHHHHHHHHH----hc-CCcEEEEecCcceeccCCCC
Q 021819           80 GCKGVFHVASPCTLE-------------DPVDPEKELILPAVQGTLNVLEAAK----RF-GVRRVVVTSSISAIVPNPGW  141 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~-------------~~~~~~~~~~~~n~~~~~~l~~~~~----~~-~~~~~v~iSS~~~~~~~~~~  141 (307)
                      .+|+|||+||.....             ...+.+...+++|+.++.++.+.+.    +. ..+++|++||.. .++.+..
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~~~  160 (253)
T PRK08217         82 QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNMGQ  160 (253)
T ss_pred             CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCCCC
Confidence            469999999864321             1123446778899999988876553    22 235799999854 3332221


Q ss_pred             CCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCC
Q 021819          142 KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK  218 (307)
Q Consensus       142 ~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~  218 (307)
                                          ..|+.+|.+.+.+++.++++   .+++++.++|+.+.++.....   ............+
T Consensus       161 --------------------~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~---~~~~~~~~~~~~~  217 (253)
T PRK08217        161 --------------------TNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAM---KPEALERLEKMIP  217 (253)
T ss_pred             --------------------chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc---CHHHHHHHHhcCC
Confidence                                56999999999998888764   589999999999988765332   1233333322222


Q ss_pred             CCCCCcccCcccHHHHHHHHHHhhcCCCCCce-EEec
Q 021819          219 DTQEYHWLGAVPVKDVAKAQVLLFESPAASGR-YLCT  254 (307)
Q Consensus       219 ~~~~~~~~~~i~~~dva~~~~~~~~~~~~~g~-~~~~  254 (307)
                            ...+.+++|+|+++.+++......|. +++.
T Consensus       218 ------~~~~~~~~~~a~~~~~l~~~~~~~g~~~~~~  248 (253)
T PRK08217        218 ------VGRLGEPEEIAHTVRFIIENDYVTGRVLEID  248 (253)
T ss_pred             ------cCCCcCHHHHHHHHHHHHcCCCcCCcEEEeC
Confidence                  23467999999999999976555564 4443

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.89  E-value=8.6e-22  Score=166.05  Aligned_cols=217  Identities=17%  Similarity=0.103  Sum_probs=145.6

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCc-------
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC-------   81 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~-------   81 (307)
                      ||+++||||+|+||++++++|+++|+ +|++++|++.+  .+..+......+++++++|++|+++++++++.+       
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g~-~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   77 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKGT-HVISISRTENK--ELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQED   77 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcCC-EEEEEeCCchH--HHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcc
Confidence            46899999999999999999999999 89999987522  111111111126889999999999988877532       


Q ss_pred             ----cEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHHH----hc-CCcEEEEecCcceeccCCCCCCcccc
Q 021819           82 ----KGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAK----RF-GVRRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        82 ----d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~-~~~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                          +++||+||....     ....+.+.+.+++|+.++..+++.+.    +. +.++||++||..+..+.+.       
T Consensus        78 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------  150 (251)
T PRK06924         78 NVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFG-------  150 (251)
T ss_pred             cCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCC-------
Confidence                278999987532     22334567888899998777766653    32 3468999999655322222       


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh-----cCCcEEEEecCceeCCCCCCC---CcchHHHHHHHHcCCCC
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKD  219 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~i~~~ivrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~  219 (307)
                                   ...|+.+|...+.+++.++.+     .+++++.++||.+.++.....   ...............  
T Consensus       151 -------------~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--  215 (251)
T PRK06924        151 -------------WSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLK--  215 (251)
T ss_pred             -------------cHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHh--
Confidence                         157999999999999888755     379999999999877642110   000000111111100  


Q ss_pred             CCCCcccCcccHHHHHHHHHHhhcC-CCCCceEEec
Q 021819          220 TQEYHWLGAVPVKDVAKAQVLLFES-PAASGRYLCT  254 (307)
Q Consensus       220 ~~~~~~~~~i~~~dva~~~~~~~~~-~~~~g~~~~~  254 (307)
                          ....+.+++|+|+.++.++.. ....|.++..
T Consensus       216 ----~~~~~~~~~dva~~~~~l~~~~~~~~G~~~~v  247 (251)
T PRK06924        216 ----EEGKLLSPEYVAKALRNLLETEDFPNGEVIDI  247 (251)
T ss_pred             ----hcCCcCCHHHHHHHHHHHHhcccCCCCCEeeh
Confidence                012368999999999999986 4445665433

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.89  E-value=2.8e-21  Score=162.47  Aligned_cols=206  Identities=17%  Similarity=0.138  Sum_probs=144.1

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeC-CCCCC-cccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r-~~~~~-~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +|+++||||+|+||++++++|+++|+ +|++..+ +.... +.+..+.... .++..+.+|++|.+++.++++       
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALG-FDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            67999999999999999999999999 7776543 22221 1122211111 157788999999988877765       


Q ss_pred             CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                      ++|+||||||....    ....+++.+.+++|+.++.++++++    .+.+.+++|++||..+..+.+..          
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~----------  150 (246)
T PRK12938         81 EIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQ----------  150 (246)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCC----------
Confidence            57999999997542    1223456788999999977766665    45566799999997654433322          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (307)
                                ..|+.+|.+.+.+.+.++++   .++++++++||.+.++.....   ............      ....+
T Consensus       151 ----------~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~---~~~~~~~~~~~~------~~~~~  211 (246)
T PRK12938        151 ----------TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI---RPDVLEKIVATI------PVRRL  211 (246)
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhc---ChHHHHHHHhcC------CccCC
Confidence                      56999999888888776654   489999999999988764321   122222222221      12346


Q ss_pred             ccHHHHHHHHHHhhcCC
Q 021819          229 VPVKDVAKAQVLLFESP  245 (307)
Q Consensus       229 i~~~dva~~~~~~~~~~  245 (307)
                      .+++|++.++++++..+
T Consensus       212 ~~~~~v~~~~~~l~~~~  228 (246)
T PRK12938        212 GSPDEIGSIVAWLASEE  228 (246)
T ss_pred             cCHHHHHHHHHHHcCcc
Confidence            78999999999888653

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.89  E-value=2.5e-21  Score=164.00  Aligned_cols=223  Identities=14%  Similarity=0.077  Sum_probs=150.7

Q ss_pred             cCCcEEEEeCCch--hhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            7 KEEETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         7 ~~~~~ilItGatG--~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      .++|+++||||++  +||+++++.|+++|+ +|+..+|+....+.++.+..... ....+++|++|+++++++++     
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g-~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIG-CNFVSELDVTNPKSISNLFDDIKEK   83 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcC-CceEEEccCCCHHHHHHHHHHHHHH
Confidence            3568999999997  899999999999999 88887776322222222221111 23467899999999887775     


Q ss_pred             --CccEEEEeccCCCC--------CCCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcccc
Q 021819           80 --GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        80 --~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                        .+|++||+||....        +...+++.+.+++|+.++..+++++...  ..+++|++||..+..+.+..      
T Consensus        84 ~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~------  157 (260)
T PRK06603         84 WGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPNY------  157 (260)
T ss_pred             cCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCCcc------
Confidence              47999999986431        2233457889999999999998876432  12689999997654332221      


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCc
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (307)
                                    ..|+.+|...+.+.+.++.+   .|++++++.||.|.++....... ............+      
T Consensus       158 --------------~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p------  216 (260)
T PRK06603        158 --------------NVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGD-FSTMLKSHAATAP------  216 (260)
T ss_pred             --------------cchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCC-cHHHHHHHHhcCC------
Confidence                          46888998888888777654   58999999999998764221111 1112222222111      


Q ss_pred             ccCcccHHHHHHHHHHhhcCC--CCCceEEecCCcc
Q 021819          225 WLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIY  258 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~  258 (307)
                      ...+..++|+|+++++++...  ...|..+..++++
T Consensus       217 ~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~  252 (260)
T PRK06603        217 LKRNTTQEDVGGAAVYLFSELSKGVTGEIHYVDCGY  252 (260)
T ss_pred             cCCCCCHHHHHHHHHHHhCcccccCcceEEEeCCcc
Confidence            234678999999999998743  3456655555443

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.4e-21  Score=165.69  Aligned_cols=213  Identities=14%  Similarity=0.074  Sum_probs=150.1

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      .+++|+++||||+|+||+++++.|+++|+..|++++|+..+..... .+..... ++.++.+|+++++++.++++     
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGA-KAVFVQADLSDVEDCRRVVAAADEA   81 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCC-eEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3457899999999999999999999999933999988754433211 1111111 57789999999998887765     


Q ss_pred             --CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cC-CcEEEEecCcceeccCCCCCCccccc
Q 021819           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                        ++|+|||++|.....    ...+.+...+++|+.++.++++++.+    .+ .+++|++||..+..+.+..       
T Consensus        82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~-------  154 (260)
T PRK06198         82 FGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFL-------  154 (260)
T ss_pred             hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCc-------
Confidence              579999999975431    12334467899999999999888744    22 3589999997764433322       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCC----CcchHHHHHHHHcCCCCCC
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPY----LNASCAVLQQLLQGSKDTQ  221 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~~~  221 (307)
                                   ..|+.+|...|.+.+.++.+.   +++++.++|+.++++.....    ......+........    
T Consensus       155 -------------~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~----  217 (260)
T PRK06198        155 -------------AAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQ----  217 (260)
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccC----
Confidence                         579999999999998877654   69999999999998864211    001112222221111    


Q ss_pred             CCcccCcccHHHHHHHHHHhhcCC
Q 021819          222 EYHWLGAVPVKDVAKAQVLLFESP  245 (307)
Q Consensus       222 ~~~~~~~i~~~dva~~~~~~~~~~  245 (307)
                        ....+++++|+++++.+++...
T Consensus       218 --~~~~~~~~~~~a~~~~~l~~~~  239 (260)
T PRK06198        218 --PFGRLLDPDEVARAVAFLLSDE  239 (260)
T ss_pred             --CccCCcCHHHHHHHHHHHcChh
Confidence              1345689999999999988654

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.6e-21  Score=164.14  Aligned_cols=198  Identities=20%  Similarity=0.129  Sum_probs=146.4

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCC-CCCceEEEEcccCChhHHHHHhc-------
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGA-GDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +|+++||||+|+||++++++|+++|+ +|++.+|++...+.+.. +... ...++.++++|++|++++.++++       
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG   80 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999998 89999987654433221 1110 11268889999999988877665       


Q ss_pred             CccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                      ++|++||+||......    ..+.+...+++|+.++.++++++.    +.+.++||++||..+..+.+..          
T Consensus        81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~----------  150 (248)
T PRK08251         81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGV----------  150 (248)
T ss_pred             CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCC----------
Confidence            5799999999754422    123346788999999999888874    4466799999997765543321          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (307)
                               ...|+.+|...+.+.+.++.+   .++++++++||.+.++......                    .....
T Consensus       151 ---------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~--------------------~~~~~  201 (248)
T PRK08251        151 ---------KAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAK--------------------STPFM  201 (248)
T ss_pred             ---------cccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhccc--------------------cCCcc
Confidence                     156999999999888877755   3799999999999876532210                    01124


Q ss_pred             ccHHHHHHHHHHhhcCCC
Q 021819          229 VPVKDVAKAQVLLFESPA  246 (307)
Q Consensus       229 i~~~dva~~~~~~~~~~~  246 (307)
                      ++++|.|++++..+++..
T Consensus       202 ~~~~~~a~~i~~~~~~~~  219 (248)
T PRK08251        202 VDTETGVKALVKAIEKEP  219 (248)
T ss_pred             CCHHHHHHHHHHHHhcCC
Confidence            789999999999997543

>PRK06484 short chain dehydrogenase; Validated

Probab=99.88  E-value=2e-21  Score=180.59  Aligned_cols=220  Identities=18%  Similarity=0.175  Sum_probs=157.8

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      ..+|+++||||+|+||+++++.|+++|+ +|++++|+....+.+.....  . ++..+.+|++|++++.++++       
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~-~~~~~~~D~~~~~~~~~~~~~~~~~~g  342 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALG--D-EHLSVQADITDEAAVESAFAQIQARWG  342 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhC--C-ceeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3578999999999999999999999999 89999997655443332211  1 56778999999999888775       


Q ss_pred             CccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           80 GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        80 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      .+|++|||||....     ....+.+++.+++|+.++.++++++...  +.++||++||..+..+.++.           
T Consensus       343 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  411 (520)
T PRK06484        343 RLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPPR-----------  411 (520)
T ss_pred             CCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCCC-----------
Confidence            47999999997532     1223456889999999999999998664  34689999998775544332           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcc
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (307)
                               ..|+.+|...+.+.+.++.+.   |+++++|+||.|.++...............+....+      ...+.
T Consensus       412 ---------~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~  476 (520)
T PRK06484        412 ---------NAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIP------LGRLG  476 (520)
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCC------CCCCc
Confidence                     579999999999988887654   899999999999887543211100111122222111      22357


Q ss_pred             cHHHHHHHHHHhhcCC--CCCceEEecCC
Q 021819          230 PVKDVAKAQVLLFESP--AASGRYLCTNG  256 (307)
Q Consensus       230 ~~~dva~~~~~~~~~~--~~~g~~~~~~~  256 (307)
                      .++|+|+++++++...  ...|..+..++
T Consensus       477 ~~~dia~~~~~l~s~~~~~~~G~~i~vdg  505 (520)
T PRK06484        477 DPEEVAEAIAFLASPAASYVNGATLTVDG  505 (520)
T ss_pred             CHHHHHHHHHHHhCccccCccCcEEEECC
Confidence            8999999999988643  24465544433

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.3e-21  Score=162.31  Aligned_cols=206  Identities=15%  Similarity=0.096  Sum_probs=143.9

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCC--hhHHHHHh-----
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLD--SGAVSRAV-----   78 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d--~~~~~~~~-----   78 (307)
                      +++++++||||+|+||+++++.|+++|+ +|++++|+....+.+.. +.......+..+.+|+++  .+++.+++     
T Consensus         4 l~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~   82 (239)
T PRK08703          4 LSDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE   82 (239)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence            3468999999999999999999999999 89999997754432211 111111145678899975  33444433     


Q ss_pred             ---cCccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCccc
Q 021819           79 ---EGCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVF  146 (307)
Q Consensus        79 ---~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~  146 (307)
                         ..+|+|||+||....     +...+++.+.+++|+.++.++++++.+    .+.+++|++||..+..+.+..     
T Consensus        83 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~-----  157 (239)
T PRK08703         83 ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYW-----  157 (239)
T ss_pred             HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCc-----
Confidence               357999999996432     122234567899999999998888743    345789999986553332221     


Q ss_pred             ccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc----CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCC
Q 021819          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH----GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (307)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~----~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (307)
                                     ..|+.+|...+.+++.++.+.    ++++++++||.|+++.......           +      
T Consensus       158 ---------------~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~-----------~------  205 (239)
T PRK08703        158 ---------------GGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHP-----------G------  205 (239)
T ss_pred             ---------------cchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCC-----------C------
Confidence                           569999999999998887764    5999999999999986332100           0      


Q ss_pred             CcccCcccHHHHHHHHHHhhc--CCCCCce
Q 021819          223 YHWLGAVPVKDVAKAQVLLFE--SPAASGR  250 (307)
Q Consensus       223 ~~~~~~i~~~dva~~~~~~~~--~~~~~g~  250 (307)
                      .....+..++|++.++++++.  +....|.
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  235 (239)
T PRK08703        206 EAKSERKSYGDVLPAFVWWASAESKGRSGE  235 (239)
T ss_pred             CCccccCCHHHHHHHHHHHhCccccCcCCe
Confidence            011235699999999999987  3334453

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.8e-21  Score=165.91  Aligned_cols=217  Identities=19%  Similarity=0.169  Sum_probs=149.4

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC---------CCCccc-ccCCCCCCCceEEEEcccCChhHHHH
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG---------SDSSHL-FALPGAGDANLRVFEADVLDSGAVSR   76 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~---------~~~~~~-~~~~~~~~~~~~~i~~D~~d~~~~~~   76 (307)
                      +++|+++||||+++||+++++.|+++|+ +|++.+|+.         +..+.+ ..+..... ++..+.+|++|++++.+
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~v~~   81 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGG-EAVANGDDIADWDGAAN   81 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCC-ceEEEeCCCCCHHHHHH
Confidence            4578999999999999999999999999 888877754         211111 11111122 57788999999988877


Q ss_pred             Hhc-------CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHh----cC------CcEEEEecCccee
Q 021819           77 AVE-------GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR----FG------VRRVVVTSSISAI  135 (307)
Q Consensus        77 ~~~-------~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~------~~~~v~iSS~~~~  135 (307)
                      +++       .+|++|||||....    +...+.+...+++|+.++.++++++..    .+      .++||++||.++.
T Consensus        82 ~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~  161 (286)
T PRK07791         82 LVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGL  161 (286)
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhC
Confidence            664       57999999997542    222345688999999999999887742    11      2589999997776


Q ss_pred             ccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHH
Q 021819          136 VPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQ  212 (307)
Q Consensus       136 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~  212 (307)
                      .+.++.                    ..|+.+|.+.+.+.+.++.+   .|++++.|.|+ +.++...       .....
T Consensus       162 ~~~~~~--------------------~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~-------~~~~~  213 (286)
T PRK07791        162 QGSVGQ--------------------GNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTE-------TVFAE  213 (286)
T ss_pred             cCCCCc--------------------hhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcch-------hhHHH
Confidence            554442                    56999999988888877665   58999999998 5444311       11111


Q ss_pred             HHcCCCCCCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          213 LLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       213 ~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                      .....+    .....+..++|+|+++++++...  ...|.++..+++
T Consensus       214 ~~~~~~----~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG  256 (286)
T PRK07791        214 MMAKPE----EGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGG  256 (286)
T ss_pred             HHhcCc----ccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCC
Confidence            111111    11124568999999999988643  345776655544

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.4e-21  Score=165.36  Aligned_cols=212  Identities=16%  Similarity=0.206  Sum_probs=142.4

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCC-CCcccc----cCCCCCCCceEEEEcccCChhHHHHHhc--
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSHLF----ALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~-~~~~~~----~~~~~~~~~~~~i~~D~~d~~~~~~~~~--   79 (307)
                      +++|+++||||+|+||+++++.|+++|+ +|+.+.++.. ..+...    .+.... .++.++++|++|++++.++++  
T Consensus         6 l~~k~vlItGa~~gIG~~~a~~l~~~G~-~vv~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~   83 (257)
T PRK12744          6 LKGKVVLIAGGAKNLGGLIARDLAAQGA-KAVAIHYNSAASKADAEETVAAVKAAG-AKAVAFQADLTTAAAVEKLFDDA   83 (257)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCC-cEEEEecCCccchHHHHHHHHHHHHhC-CcEEEEecCcCCHHHHHHHHHHH
Confidence            4568999999999999999999999999 6666655332 111111    111111 167889999999999887765  


Q ss_pred             -----CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEe-cCcceeccCCCCCCcccc
Q 021819           80 -----GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVT-SSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        80 -----~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~i-SS~~~~~~~~~~~~~~~~  147 (307)
                           ++|++||+||....    ....+++.+.+++|+.++..+++++.+.  ..++++++ ||..+.+. +.       
T Consensus        84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~-~~-------  155 (257)
T PRK12744         84 KAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT-PF-------  155 (257)
T ss_pred             HHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC-CC-------
Confidence                 57999999997532    2223456788999999999999998654  12467766 44333211 11       


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCc
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (307)
                                   ...|+.+|.+.+.+.+.++++.   ++++++++||.+.++...+... . .... .........+..
T Consensus       156 -------------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~-~-~~~~-~~~~~~~~~~~~  219 (257)
T PRK12744        156 -------------YSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEG-A-EAVA-YHKTAAALSPFS  219 (257)
T ss_pred             -------------cccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccc-c-chhh-cccccccccccc
Confidence                         1579999999999999888774   7999999999998875422111 0 0000 000000000112


Q ss_pred             ccCcccHHHHHHHHHHhhcC
Q 021819          225 WLGAVPVKDVAKAQVLLFES  244 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~  244 (307)
                      ...+.+++|+|.++.+++..
T Consensus       220 ~~~~~~~~dva~~~~~l~~~  239 (257)
T PRK12744        220 KTGLTDIEDIVPFIRFLVTD  239 (257)
T ss_pred             cCCCCCHHHHHHHHHHhhcc
Confidence            23578999999999999884

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.88  E-value=2e-21  Score=163.47  Aligned_cols=218  Identities=19%  Similarity=0.153  Sum_probs=146.9

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeC-CCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r-~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      ||+|+||||+|+||+.+++.|+++|+ +|+...+ +.+..+.... +..... ++.++++|++|.+++.++++       
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGW-SVGINYARDAAAAEETADAVRAAGG-RACVVAGDVANEADVIAMFDAVQSAFG   79 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            46999999999999999999999999 7766544 3332222211 111112 68899999999988877664       


Q ss_pred             CccEEEEeccCCCCC-----CCCChhhhhhhhhHHHHHHHHHHHHhc----C---CcEEEEecCcceeccCCCCCCcccc
Q 021819           80 GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAKRF----G---VRRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~---~~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                      .+|+|||+||.....     ...+++...+++|+.++.++++++.+.    +   .++||++||.++.++.+..      
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~------  153 (248)
T PRK06947         80 RLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNE------  153 (248)
T ss_pred             CCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCC------
Confidence            589999999975321     122334677999999998887655332    1   2469999997765543321      


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCc
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (307)
                              +     ..|+.+|...+.+.+.++++.   +++++++|||.+.++......  ............+      
T Consensus       154 --------~-----~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~--~~~~~~~~~~~~~------  212 (248)
T PRK06947        154 --------Y-----VDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGG--QPGRAARLGAQTP------  212 (248)
T ss_pred             --------C-----cccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccC--CHHHHHHHhhcCC------
Confidence                    1     369999999998888877664   899999999999988643211  1111111111111      


Q ss_pred             ccCcccHHHHHHHHHHhhcCCC--CCceEEecC
Q 021819          225 WLGAVPVKDVAKAQVLLFESPA--ASGRYLCTN  255 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~~--~~g~~~~~~  255 (307)
                      .....+++|+++.+++++..+.  ..|.++..+
T Consensus       213 ~~~~~~~e~va~~~~~l~~~~~~~~~G~~~~~~  245 (248)
T PRK06947        213 LGRAGEADEVAETIVWLLSDAASYVTGALLDVG  245 (248)
T ss_pred             CCCCcCHHHHHHHHHHHcCccccCcCCceEeeC
Confidence            1224688999999999887654  346665433

>PRK08324 short chain dehydrogenase; Validated

Probab=99.88  E-value=1.5e-21  Score=185.76  Aligned_cols=223  Identities=21%  Similarity=0.188  Sum_probs=157.1

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ..+++++||||+|+||+++++.|+++|+ +|++++|+.+....... +...  .++..+.+|++|++++.++++      
T Consensus       420 l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~r~~~~~~~~~~~l~~~--~~v~~v~~Dvtd~~~v~~~~~~~~~~~  496 (681)
T PRK08324        420 LAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLADLDEEAAEAAAAELGGP--DRALGVACDVTDEAAVQAAFEEAALAF  496 (681)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHhcc--CcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3568999999999999999999999999 89999997655433322 2111  167899999999998887775      


Q ss_pred             -CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHH----hcCC-cEEEEecCcceeccCCCCCCcccccC
Q 021819           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGV-RRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                       ++|+||||||.....    ...+.+...+++|+.++.++++++.    +++. ++||++||..+..+.++.        
T Consensus       497 g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~--------  568 (681)
T PRK08324        497 GGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNF--------  568 (681)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCc--------
Confidence             589999999975432    2234467889999999999977774    4443 789999997766544332        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCcee-CCCCCCCCcchHHHHHHHHcCCCC------
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCL-GPLMQPYLNASCAVLQQLLQGSKD------  219 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~-g~~~~~~~~~~~~~~~~~~~~~~~------  219 (307)
                                  ..|+.+|...+.+++.++.+.   ++++++++|+.|| +.......  . ........+...      
T Consensus       569 ------------~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~--~-~~~~~~~~g~~~~~~~~~  633 (681)
T PRK08324        569 ------------GAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGE--W-IEARAAAYGLSEEELEEF  633 (681)
T ss_pred             ------------HHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccch--h-hhhhhhhccCChHHHHHH
Confidence                        579999999999999887664   6999999999997 44322110  0 000000001000      


Q ss_pred             -CCCCcccCcccHHHHHHHHHHhhc--CCCCCce-EEecC
Q 021819          220 -TQEYHWLGAVPVKDVAKAQVLLFE--SPAASGR-YLCTN  255 (307)
Q Consensus       220 -~~~~~~~~~i~~~dva~~~~~~~~--~~~~~g~-~~~~~  255 (307)
                       ......+.+++++|+|+++++++.  .....|. +++.+
T Consensus       634 ~~~~~~l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdg  673 (681)
T PRK08324        634 YRARNLLKREVTPEDVAEAVVFLASGLLSKTTGAIITVDG  673 (681)
T ss_pred             HHhcCCcCCccCHHHHHHHHHHHhCccccCCcCCEEEECC
Confidence             001245678999999999999884  3444564 55543

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=6.5e-21  Score=161.19  Aligned_cols=215  Identities=19%  Similarity=0.156  Sum_probs=147.5

Q ss_pred             CCcEEEEeCCch--hhHHHHHHHHHHCCCCeEEEEeCCCCCC---------cc--ccc-CCCCCCCceEEEEcccCChhH
Q 021819            8 EEETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGSDS---------SH--LFA-LPGAGDANLRVFEADVLDSGA   73 (307)
Q Consensus         8 ~~~~ilItGatG--~iG~~l~~~L~~~g~~~V~~~~r~~~~~---------~~--~~~-~~~~~~~~~~~i~~D~~d~~~   73 (307)
                      ++++|+||||+|  +||++++++|+++|+ +|++++|++...         +.  +.. +..... ++.++++|+++.++
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~   81 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAAKGI-DIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGV-RCEHMEIDLSQPYA   81 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHHcCC-cEEEEcCCccccccccccchhhHHHHHHHHHhcCC-eEEEEECCCCCHHH
Confidence            467999999995  799999999999999 899988862211         00  111 111112 68899999999988


Q ss_pred             HHHHhc-------CccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHHHhc----CCcEEEEecCcceeccC
Q 021819           74 VSRAVE-------GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPN  138 (307)
Q Consensus        74 ~~~~~~-------~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~iSS~~~~~~~  138 (307)
                      +..+++       .+|+|||+||......    ..+.++..+++|+.++.++++++...    +.+++|++||..++.+.
T Consensus        82 ~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~  161 (256)
T PRK12748         82 PNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPM  161 (256)
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCC
Confidence            877665       4799999998754321    12345778999999999999998543    44689999996654332


Q ss_pred             CCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHc
Q 021819          139 PGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQ  215 (307)
Q Consensus       139 ~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~  215 (307)
                      ++.                    ..|+.+|.+.+.+++.++.+   .+++++.++||.+.++....      ........
T Consensus       162 ~~~--------------------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~------~~~~~~~~  215 (256)
T PRK12748        162 PDE--------------------LAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE------ELKHHLVP  215 (256)
T ss_pred             CCc--------------------hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh------hHHHhhhc
Confidence            221                    46999999999998877655   48999999999887764221      11111111


Q ss_pred             CCCCCCCCcccCcccHHHHHHHHHHhhcCCC--CCceEEecCC
Q 021819          216 GSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNG  256 (307)
Q Consensus       216 ~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~--~~g~~~~~~~  256 (307)
                      ..      ....+..++|+++++.+++....  ..|.++..++
T Consensus       216 ~~------~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~  252 (256)
T PRK12748        216 KF------PQGRVGEPVDAARLIAFLVSEEAKWITGQVIHSEG  252 (256)
T ss_pred             cC------CCCCCcCHHHHHHHHHHHhCcccccccCCEEEecC
Confidence            11      11234578999999988876533  3465543333

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.88  E-value=4.4e-21  Score=162.48  Aligned_cols=222  Identities=13%  Similarity=0.083  Sum_probs=148.6

Q ss_pred             cCCcEEEEeCC--chhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            7 KEEETVCVTGA--NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         7 ~~~~~ilItGa--tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      +++|+++||||  +++||+++++.|+++|+ +|+...|.....+.+..+..... ....+++|++|+++++++++     
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~   81 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFG-SDLVFPCDVASDEQIDALFASLGQH   81 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcC-CcceeeccCCCHHHHHHHHHHHHHH
Confidence            34689999996  68999999999999999 88877654222222222211111 23468899999999888775     


Q ss_pred             --CccEEEEeccCCCCC---------CCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCccc
Q 021819           80 --GCKGVFHVASPCTLE---------DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVF  146 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~  146 (307)
                        .+|++|||||.....         ...+++...+++|+.++..+.+++...  +.+++|++||..+..+.+..     
T Consensus        82 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~~~-----  156 (260)
T PRK06997         82 WDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPNY-----  156 (260)
T ss_pred             hCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCCCc-----
Confidence              479999999975321         122356788999999999998887553  23689999997654332221     


Q ss_pred             ccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCC
Q 021819          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (307)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (307)
                                     ..|+.+|...+.+.+.++.+   .|++++.|.||.|.++....... ............+     
T Consensus       157 ---------------~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~-~~~~~~~~~~~~p-----  215 (260)
T PRK06997        157 ---------------NTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKD-FGKILDFVESNAP-----  215 (260)
T ss_pred             ---------------chHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccc-hhhHHHHHHhcCc-----
Confidence                           46999999998888877765   48999999999998764321110 0111111111111     


Q ss_pred             cccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          224 HWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       224 ~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                       ...+..++|+++++.+++...  ...|..+..+++
T Consensus       216 -~~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg  250 (260)
T PRK06997        216 -LRRNVTIEEVGNVAAFLLSDLASGVTGEITHVDSG  250 (260)
T ss_pred             -ccccCCHHHHHHHHHHHhCccccCcceeEEEEcCC
Confidence             234678999999999998753  344654444433

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3e-21  Score=163.92  Aligned_cols=203  Identities=18%  Similarity=0.133  Sum_probs=147.2

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------Cc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------GC   81 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------~~   81 (307)
                      ++++++||||+|+||++++++|+++|+ +|++++|+.+..+.+....... .++.++++|++|++++.++++      .+
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~~~~~~i   81 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYP-GRHRWVVADLTSEAGREAVLARAREMGGI   81 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcC-CceEEEEccCCCHHHHHHHHHHHHhcCCC
Confidence            467999999999999999999999999 8999999765443332211111 268899999999988877664      57


Q ss_pred             cEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcccccCCCCc
Q 021819           82 KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (307)
Q Consensus        82 d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~  153 (307)
                      |+|||+||.....    ...+...+.+++|+.++.++++.+.+    .+.+++|++||..+..+.++.            
T Consensus        82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~------------  149 (263)
T PRK09072         82 NVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGY------------  149 (263)
T ss_pred             CEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCc------------
Confidence            9999999875432    12234477889999999999998854    344689999987665443332            


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCccc
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  230 (307)
                              ..|+.+|...+.+.+.++.+   .+++++++.||.+.++......       .. ....      ......+
T Consensus       150 --------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~-------~~-~~~~------~~~~~~~  207 (263)
T PRK09072        150 --------ASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAV-------QA-LNRA------LGNAMDD  207 (263)
T ss_pred             --------cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhc-------cc-cccc------ccCCCCC
Confidence                    46999999988888777655   4899999999988776422110       00 0000      1123578


Q ss_pred             HHHHHHHHHHhhcCCC
Q 021819          231 VKDVAKAQVLLFESPA  246 (307)
Q Consensus       231 ~~dva~~~~~~~~~~~  246 (307)
                      ++|+|++++.++++..
T Consensus       208 ~~~va~~i~~~~~~~~  223 (263)
T PRK09072        208 PEDVAAAVLQAIEKER  223 (263)
T ss_pred             HHHHHHHHHHHHhCCC
Confidence            9999999999998754

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.88  E-value=4.2e-21  Score=163.21  Aligned_cols=227  Identities=18%  Similarity=0.098  Sum_probs=149.7

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCC-CCCceEEEEcccCChhHHHHHhc----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGA-GDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.... +... ...++..+.+|++|++++.++++    
T Consensus         5 ~l~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T PRK07062          5 QLEGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEA   83 (265)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence            34578999999999999999999999999 89999997654433221 1111 11167789999999998877664    


Q ss_pred             ---CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                         .+|++|||||.....    ...+.+.+.+++|+.+...+++++    ++.+.+++|++||..+..+.+..       
T Consensus        84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  156 (265)
T PRK07062         84 RFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHM-------  156 (265)
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCc-------
Confidence               479999999975421    223356788899988887777765    34455789999997764433322       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCC------c-chHHHHHHHHcCCC
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL------N-ASCAVLQQLLQGSK  218 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~------~-~~~~~~~~~~~~~~  218 (307)
                                   ..|+.+|...+.+.+.++.+   .|+++++++||.|.++......      . ..............
T Consensus       157 -------------~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (265)
T PRK07062        157 -------------VATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKG  223 (265)
T ss_pred             -------------hHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCC
Confidence                         45778888777776665544   5899999999999887532110      0 00011111111010


Q ss_pred             CCCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          219 DTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       219 ~~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                      .    ....+..++|+|.++++++...  ...|..+..+++
T Consensus       224 ~----p~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgg  260 (265)
T PRK07062        224 I----PLGRLGRPDEAARALFFLASPLSSYTTGSHIDVSGG  260 (265)
T ss_pred             C----CcCCCCCHHHHHHHHHHHhCchhcccccceEEEcCc
Confidence            0    1234678999999999887642  344654444433

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.88  E-value=3e-21  Score=161.44  Aligned_cols=213  Identities=20%  Similarity=0.143  Sum_probs=149.8

Q ss_pred             EEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCC-CCccc-ccCCCCCCCceEEEEcccCChhHHHHHhc-------Ccc
Q 021819           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-------GCK   82 (307)
Q Consensus        12 ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~-~~~~~-~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~~d   82 (307)
                      ++|||++|+||++++++|+++|+ +|++++|+.. ..... ..+..... ++.++.+|++|+++++++++       .+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGA-KVIITYRSSEEGAEEVVEELKAYGV-KALGVVCDVSDREDVKAVVEEIEEELGPID   78 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            58999999999999999999999 8999988652 21111 11111111 57889999999998888775       369


Q ss_pred             EEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcccccCCCCch
Q 021819           83 GVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (307)
Q Consensus        83 ~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~  154 (307)
                      +|||++|.....    ...+.++..+++|+.++.++++.+.+    .+.++||++||.++.++.+..             
T Consensus        79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~-------------  145 (239)
T TIGR01830        79 ILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQ-------------  145 (239)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCC-------------
Confidence            999999975431    12234578899999999999998865    345699999997776654332             


Q ss_pred             hhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccH
Q 021819          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPV  231 (307)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  231 (307)
                             ..|+.+|...+.+.+.++++   .++++++++|+.+.++......   ...........+      ...+.++
T Consensus       146 -------~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~---~~~~~~~~~~~~------~~~~~~~  209 (239)
T TIGR01830       146 -------ANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLS---EKVKKKILSQIP------LGRFGTP  209 (239)
T ss_pred             -------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcC---hHHHHHHHhcCC------cCCCcCH
Confidence                   46999999988888776654   5899999999988776432221   122222222211      2346789


Q ss_pred             HHHHHHHHHhhcCCC--CCce-EEecC
Q 021819          232 KDVAKAQVLLFESPA--ASGR-YLCTN  255 (307)
Q Consensus       232 ~dva~~~~~~~~~~~--~~g~-~~~~~  255 (307)
                      +|++++++.++....  ..|. |++.+
T Consensus       210 ~~~a~~~~~~~~~~~~~~~g~~~~~~~  236 (239)
T TIGR01830       210 EEVANAVAFLASDEASYITGQVIHVDG  236 (239)
T ss_pred             HHHHHHHHHHhCcccCCcCCCEEEeCC
Confidence            999999998885532  3453 55543

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.88  E-value=3.9e-21  Score=162.81  Aligned_cols=220  Identities=14%  Similarity=0.065  Sum_probs=146.2

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------Ccc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GCK   82 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~~d   82 (307)
                      |+++||||+|+||++++++|+++|+ +|++.+|+++..+.......... ++.++++|++|+++++++++       .+|
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id   78 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYG-EVYAVKADLSDKDDLKNLVKEAWELLGGID   78 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcC-CceEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence            4899999999999999999999999 89999987654332221111111 57789999999998887774       579


Q ss_pred             EEEEeccCCCC------CCCCChhhhhhhhhHHHHHHHHHHH----H-hcCCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           83 GVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAA----K-RFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        83 ~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~----~-~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                      ++|||||....      +...+++.+.+.+|+.++..+.+.+    . +.+.++||++||..+..+.+..          
T Consensus        79 ~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~----------  148 (259)
T PRK08340         79 ALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPL----------  148 (259)
T ss_pred             EEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCc----------
Confidence            99999996431      1122344566788887766555443    3 2345789999997654332221          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCc--------chHH-HHHHHHcCCCC
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLN--------ASCA-VLQQLLQGSKD  219 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~--------~~~~-~~~~~~~~~~~  219 (307)
                                ..|+.+|...+.+.+.++.+.   |++++.+.||.+.++.......        .... .........  
T Consensus       149 ----------~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  216 (259)
T PRK08340        149 ----------VLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERT--  216 (259)
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccC--
Confidence                      468888988888888877654   7999999999998875321100        0000 011111111  


Q ss_pred             CCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          220 TQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       220 ~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                          ....+..++|+|+++.+++...  ...|..+..+++
T Consensus       217 ----p~~r~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg  252 (259)
T PRK08340        217 ----PLKRTGRWEELGSLIAFLLSENAEYMLGSTIVFDGA  252 (259)
T ss_pred             ----CccCCCCHHHHHHHHHHHcCcccccccCceEeecCC
Confidence                1234678999999999988743  345665555444

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.88  E-value=9.3e-21  Score=160.79  Aligned_cols=218  Identities=18%  Similarity=0.174  Sum_probs=153.4

Q ss_pred             CCcEEEEeCCch-hhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCC-CCCCceEEEEcccCChhHHHHHhc-----
Q 021819            8 EEETVCVTGANG-FIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPG-AGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         8 ~~~~ilItGatG-~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~-~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      ++++++||||+| +||+++++.|+++|+ +|++.+|+....+.... +.. ....++.++++|+++++++.++++     
T Consensus        16 ~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   94 (262)
T PRK07831         16 AGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER   94 (262)
T ss_pred             CCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            468999999997 799999999999999 89888886654332221 111 011157889999999988887765     


Q ss_pred             --CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHh----cC-CcEEEEecCcceeccCCCCCCccccc
Q 021819           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                        .+|+||||||....    ....+.+.+.+++|+.++.++++++..    .+ .+++|++||..+..+.+..       
T Consensus        95 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~-------  167 (262)
T PRK07831         95 LGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQ-------  167 (262)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCC-------
Confidence              57999999996432    112245678889999999998888743    33 4689999986654332221       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                                   ..|+.+|.+.+.+.+.++.+   +++++++++||.+.++......  .......+....+      .
T Consensus       168 -------------~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~--~~~~~~~~~~~~~------~  226 (262)
T PRK07831        168 -------------AHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVT--SAELLDELAAREA------F  226 (262)
T ss_pred             -------------cchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccccc--CHHHHHHHHhcCC------C
Confidence                         56999999999999988766   5899999999999988643221  1222223322221      2


Q ss_pred             cCcccHHHHHHHHHHhhcCCC--CCceEEec
Q 021819          226 LGAVPVKDVAKAQVLLFESPA--ASGRYLCT  254 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~~--~~g~~~~~  254 (307)
                      ..+..++|+|+++++++....  ..|..+..
T Consensus       227 ~r~~~p~~va~~~~~l~s~~~~~itG~~i~v  257 (262)
T PRK07831        227 GRAAEPWEVANVIAFLASDYSSYLTGEVVSV  257 (262)
T ss_pred             CCCcCHHHHHHHHHHHcCchhcCcCCceEEe
Confidence            346789999999999886542  34655443

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.88  E-value=8.8e-21  Score=160.85  Aligned_cols=223  Identities=15%  Similarity=0.115  Sum_probs=150.3

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC-Ccccc-cCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      +++|+++||||+|+||+++++.|+++|+ .|++..|+... ...+. .+..... ++.++.+|++|.+++.++++     
T Consensus         5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~-~vvi~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~   82 (261)
T PRK08936          5 LEGKVVVITGGSTGLGRAMAVRFGKEKA-KVVINYRSDEEEANDVAEEIKKAGG-EAIAVKGDVTVESDVVNLIQTAVKE   82 (261)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCC-eEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999 78777774322 11111 1111111 67789999999998887765     


Q ss_pred             --CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcC-CcEEEEecCcceeccCCCCCCccccc
Q 021819           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFG-VRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                        .+|++||+||.....    ...+.+++.+++|+.++.++++.+    .+.+ .+++|++||..+..+.+..       
T Consensus        83 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~-------  155 (261)
T PRK08936         83 FGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLF-------  155 (261)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCC-------
Confidence              479999999975432    122445778999988887665544    5544 3689999996554332221       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                                   ..|+.+|.+.+.+.+.++.+   .++++++++||.+.++........ ...........+      .
T Consensus       156 -------------~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~------~  215 (261)
T PRK08936        156 -------------VHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFAD-PKQRADVESMIP------M  215 (261)
T ss_pred             -------------cccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCC-HHHHHHHHhcCC------C
Confidence                         57999998888877776554   489999999999998864322111 112222222111      2


Q ss_pred             cCcccHHHHHHHHHHhhcCC--CCCceEEecCCcc
Q 021819          226 LGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIY  258 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~  258 (307)
                      ..+..++|+++.+.+++...  ...|.++..+.+.
T Consensus       216 ~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d~g~  250 (261)
T PRK08936        216 GYIGKPEEIAAVAAWLASSEASYVTGITLFADGGM  250 (261)
T ss_pred             CCCcCHHHHHHHHHHHcCcccCCccCcEEEECCCc
Confidence            34678999999999988643  3456655555443

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.88  E-value=8.2e-21  Score=159.42  Aligned_cols=205  Identities=21%  Similarity=0.233  Sum_probs=145.3

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC-Cccc-ccCCCCCCCceEEEEcccCChhHHHHHhc-------C
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~-~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~   80 (307)
                      |+++||||+|+||+++++.|+++|+ +|++++|+... .... ..... ...++.++++|++|.+++.++++       .
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   80 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGY-RVIATYFSGNDCAKDWFEEYGF-TEDQVRLKELDVTDTEECAEALAEIEEEEGP   80 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhhc-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5899999999999999999999998 89999887431 1111 11111 11168899999999998887765       4


Q ss_pred             ccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           81 CKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        81 ~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      +|++||++|....    ....+.+...+++|+.++.++.+++    ++.+.++||++||..+..+.+..           
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~-----------  149 (245)
T PRK12824         81 VDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQ-----------  149 (245)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCC-----------
Confidence            7999999997542    2223456788999999999986655    55566799999997664433332           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcc
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (307)
                               ..|..+|.+.+.+.+.++.+   .++++++++|+.+.++......   ......+....      ....+.
T Consensus       150 ---------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~---~~~~~~~~~~~------~~~~~~  211 (245)
T PRK12824        150 ---------TNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMG---PEVLQSIVNQI------PMKRLG  211 (245)
T ss_pred             ---------hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcC---HHHHHHHHhcC------CCCCCC
Confidence                     46999999888887777643   4899999999999887543221   12222222221      133466


Q ss_pred             cHHHHHHHHHHhhcCC
Q 021819          230 PVKDVAKAQVLLFESP  245 (307)
Q Consensus       230 ~~~dva~~~~~~~~~~  245 (307)
                      .++|+++++.+++...
T Consensus       212 ~~~~va~~~~~l~~~~  227 (245)
T PRK12824        212 TPEEIAAAVAFLVSEA  227 (245)
T ss_pred             CHHHHHHHHHHHcCcc
Confidence            8899999998888543

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.88  E-value=6e-21  Score=162.61  Aligned_cols=223  Identities=13%  Similarity=0.062  Sum_probs=152.0

Q ss_pred             CCcEEEEeCCc--hhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            8 EEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         8 ~~~~ilItGat--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ++|+++||||+  ++||+++++.|+++|+ +|+...|+....+.+..+..... ....+++|++|+++++++++      
T Consensus         9 ~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~   86 (272)
T PRK08159          9 AGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELG-AFVAGHCDVTDEASIDAVFETLEKKW   86 (272)
T ss_pred             cCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcC-CceEEecCCCCHHHHHHHHHHHHHhc
Confidence            46899999997  8999999999999999 88887775322222222211111 34578999999999888765      


Q ss_pred             -CccEEEEeccCCCC--------CCCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 -GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 -~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                       .+|++|||||....        ....+++...+++|+.++.++++++...  +.+++|++||.++..+.+.        
T Consensus        87 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p~--------  158 (272)
T PRK08159         87 GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMPH--------  158 (272)
T ss_pred             CCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCCc--------
Confidence             47999999997531        1223457889999999999999988653  2368999998655332222        


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                             +     ..|+.+|...+.+.+.++.+   .++++++|.||.|.++....... . ..........   .  ..
T Consensus       159 -------~-----~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~-~-~~~~~~~~~~---~--p~  219 (272)
T PRK08159        159 -------Y-----NVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGD-F-RYILKWNEYN---A--PL  219 (272)
T ss_pred             -------c-----hhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCc-c-hHHHHHHHhC---C--cc
Confidence                   1     46999999998888877765   48999999999998754321111 0 0111111111   0  12


Q ss_pred             cCcccHHHHHHHHHHhhcCC--CCCceEEecCCccc
Q 021819          226 LGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIYQ  259 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~~  259 (307)
                      ..+..++|+|+++++++...  ...|..+..++++.
T Consensus       220 ~r~~~peevA~~~~~L~s~~~~~itG~~i~vdgG~~  255 (272)
T PRK08159        220 RRTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSGYH  255 (272)
T ss_pred             cccCCHHHHHHHHHHHhCccccCccceEEEECCCce
Confidence            23578999999999998743  34577666665554

>PRK07069 short chain dehydrogenase; Validated

Probab=99.88  E-value=5.3e-21  Score=161.17  Aligned_cols=208  Identities=18%  Similarity=0.187  Sum_probs=143.3

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCC-CCCCccccc-CCCCC-CCceEEEEcccCChhHHHHHhc-------C
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFP-GSDSSHLFA-LPGAG-DANLRVFEADVLDSGAVSRAVE-------G   80 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~-~~~~~~~~~-~~~~~-~~~~~~i~~D~~d~~~~~~~~~-------~   80 (307)
                      +++||||+|+||+++++.|+++|+ +|++++|+ .+..+.+.. +.... ...+..+++|++|++++.++++       .
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   79 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGA-KVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGG   79 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            389999999999999999999999 89999987 333322221 11111 1134567899999998877765       5


Q ss_pred             ccEEEEeccCCCCC----CCCChhhhhhhhhHH----HHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQ----GTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        81 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~----~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      +|+|||+||.....    ...++..+.+++|+.    +++++++.+++.+.++||++||..+..+.+..           
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~-----------  148 (251)
T PRK07069         80 LSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDY-----------  148 (251)
T ss_pred             ccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCC-----------
Confidence            79999999875432    122345677888987    77777888887777899999997765544332           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHhc-----CCcEEEEecCceeCCCCCCCCc--chHHHHHHHHcCCCCCCCCcc
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKH-----GVDVVAIHPATCLGPLMQPYLN--ASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-----~i~~~ivrp~~v~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  225 (307)
                               ..|+.+|...+.+.+.++.+.     +++++.++|+.+.++.......  ...........+.      ..
T Consensus       149 ---------~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~------~~  213 (251)
T PRK07069        149 ---------TAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGV------PL  213 (251)
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccC------CC
Confidence                     469999999888888776552     4899999999998886432100  0011111122211      12


Q ss_pred             cCcccHHHHHHHHHHhhcCC
Q 021819          226 LGAVPVKDVAKAQVLLFESP  245 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~  245 (307)
                      ..+.+++|+|+++++++..+
T Consensus       214 ~~~~~~~~va~~~~~l~~~~  233 (251)
T PRK07069        214 GRLGEPDDVAHAVLYLASDE  233 (251)
T ss_pred             CCCcCHHHHHHHHHHHcCcc
Confidence            34568999999999877643

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.88  E-value=5.6e-21  Score=160.31  Aligned_cols=206  Identities=17%  Similarity=0.110  Sum_probs=140.9

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc---------
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---------   79 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~---------   79 (307)
                      ||+++||||||+||++++++|+++|+ +|++++|+..... ...    ...++.++++|++|.+++.++++         
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~-~v~~~~r~~~~~~-~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   74 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGI-AVLGVARSRHPSL-AAA----AGERLAEVELDLSDAAAAAAWLAGDLLAAFVD   74 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCC-EEEEEecCcchhh-hhc----cCCeEEEEEeccCCHHHHHHHHHHHHHHHhcc
Confidence            45899999999999999999999999 8999998754321 111    11168889999999988877432         


Q ss_pred             --CccEEEEeccCCCCC-----CCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 --GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                        .+|++|||||.....     ...+.+...+++|+.++..+.+.+.    +.+.+++|++||..+..+.++.       
T Consensus        75 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-------  147 (243)
T PRK07023         75 GASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGW-------  147 (243)
T ss_pred             CCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCc-------
Confidence              468999999875431     1223457889999999777766654    3445799999997654333221       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh--cCCcEEEEecCceeCCCCCCC---CcchHHHHHHHHcCCCCCCCC
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK--HGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDTQEY  223 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~--~~i~~~ivrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~  223 (307)
                                   ..|+.+|...|.+++.++.+  .++++++++||.+-++.....   ...............      
T Consensus       148 -------------~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~------  208 (243)
T PRK07023        148 -------------SVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELK------  208 (243)
T ss_pred             -------------hHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhh------
Confidence                         57999999999999888754  589999999999876532100   000000000011000      


Q ss_pred             cccCcccHHHHHHHHHHhhcCCC
Q 021819          224 HWLGAVPVKDVAKAQVLLFESPA  246 (307)
Q Consensus       224 ~~~~~i~~~dva~~~~~~~~~~~  246 (307)
                      .....+.++|+|..++..+.++.
T Consensus       209 ~~~~~~~~~~va~~~~~~l~~~~  231 (243)
T PRK07023        209 ASGALSTPEDAARRLIAYLLSDD  231 (243)
T ss_pred             hcCCCCCHHHHHHHHHHHHhccc
Confidence            11235789999997777776654

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.87  E-value=1.4e-20  Score=159.23  Aligned_cols=220  Identities=19%  Similarity=0.133  Sum_probs=149.1

Q ss_pred             ccccCCcEEEEeCCch--hhHHHHHHHHHHCCCCeEEEEeCCCC--------CCc---cc-ccCCCCCCCceEEEEcccC
Q 021819            4 EAEKEEETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGS--------DSS---HL-FALPGAGDANLRVFEADVL   69 (307)
Q Consensus         4 m~~~~~~~ilItGatG--~iG~~l~~~L~~~g~~~V~~~~r~~~--------~~~---~~-~~~~~~~~~~~~~i~~D~~   69 (307)
                      |..+++|+++||||+|  +||++++++|+++|+ +|++..|+..        ...   .+ ..+.. ...++..+++|++
T Consensus         1 ~~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~-~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~D~~   78 (256)
T PRK12859          1 MNQLKNKVAVVTGVSRLDGIGAAICKELAEAGA-DIFFTYWTAYDKEMPWGVDQDEQIQLQEELLK-NGVKVSSMELDLT   78 (256)
T ss_pred             CCCcCCcEEEEECCCCCCChHHHHHHHHHHCCC-eEEEEecccccccccccccHHHHHHHHHHHHh-cCCeEEEEEcCCC
Confidence            3345688999999995  899999999999999 7877654210        000   11 11111 1126788999999


Q ss_pred             ChhHHHHHhc-------CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcce
Q 021819           70 DSGAVSRAVE-------GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISA  134 (307)
Q Consensus        70 d~~~~~~~~~-------~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~  134 (307)
                      |.+++.++++       .+|++||+||....    ....++++..+++|+.++..+.+++    ++.+.++||++||..+
T Consensus        79 ~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~  158 (256)
T PRK12859         79 QNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQF  158 (256)
T ss_pred             CHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEccccc
Confidence            9998888775       36999999997543    2223346778999999988886555    3344569999999765


Q ss_pred             eccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHH
Q 021819          135 IVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQ  211 (307)
Q Consensus       135 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~  211 (307)
                      ..+.+..                    ..|+.+|...+.+.+.++.+   .+++++.++||.+.++....      ....
T Consensus       159 ~~~~~~~--------------------~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~------~~~~  212 (256)
T PRK12859        159 QGPMVGE--------------------LAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTE------EIKQ  212 (256)
T ss_pred             CCCCCCc--------------------hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCH------HHHH
Confidence            4333221                    57999999999998887765   58999999999997764221      1111


Q ss_pred             HHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          212 QLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       212 ~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                      ......+      ...+..++|+|+++.+++...  ...|.++..+++
T Consensus       213 ~~~~~~~------~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgg  254 (256)
T PRK12859        213 GLLPMFP------FGRIGEPKDAARLIKFLASEEAEWITGQIIHSEGG  254 (256)
T ss_pred             HHHhcCC------CCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence            1111111      223568999999998887543  345666655543

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.4e-20  Score=163.49  Aligned_cols=232  Identities=19%  Similarity=0.137  Sum_probs=154.5

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCC-CCCceEEEEcccCChhHHHHHhc--
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGA-GDANLRVFEADVLDSGAVSRAVE--   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~-~~~~~~~i~~D~~d~~~~~~~~~--   79 (307)
                      |..+++|+++||||+++||+++++.|+++|+ +|++..|+.++.+... .+... ...++.++++|++|.++++++++  
T Consensus         9 ~~~l~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~   87 (313)
T PRK05854          9 VPDLSGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQL   87 (313)
T ss_pred             CcccCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHH
Confidence            4455688999999999999999999999999 8999999765433221 11111 11268889999999998887765  


Q ss_pred             -----CccEEEEeccCCCCC---CCCChhhhhhhhhHHHHHHHHHHHHh---cCCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 -----GCKGVFHVASPCTLE---DPVDPEKELILPAVQGTLNVLEAAKR---FGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 -----~~d~vi~~a~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                           .+|++|||||.....   ...+.++..+.+|+.+...+.+.+..   .+.+++|++||.....+....  ..+.+
T Consensus        88 ~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~--~~~~~  165 (313)
T PRK05854         88 RAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINW--DDLNW  165 (313)
T ss_pred             HHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCc--ccccc
Confidence                 479999999976432   23456788999999998888887752   234689999997765442221  12222


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh-----cCCcEEEEecCceeCCCCCCCC---c----chHHHHHHHHcC
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPYL---N----ASCAVLQQLLQG  216 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~i~~~ivrp~~v~g~~~~~~~---~----~~~~~~~~~~~~  216 (307)
                      +....+      ...|+.||.+.+.+.+.++++     .++.++++.||.|.++......   .    ....++..+...
T Consensus       166 ~~~~~~------~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (313)
T PRK05854        166 ERSYAG------MRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSAR  239 (313)
T ss_pred             cccCcc------hhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhc
Confidence            221111      257999999999999888753     4799999999999887542210   0    011111111110


Q ss_pred             CCCCCCCcccCcccHHHHHHHHHHhhcCCCC-CceEE
Q 021819          217 SKDTQEYHWLGAVPVKDVAKAQVLLFESPAA-SGRYL  252 (307)
Q Consensus       217 ~~~~~~~~~~~~i~~~dva~~~~~~~~~~~~-~g~~~  252 (307)
                      .        .-+-++++.|...+++...+.. .|.|.
T Consensus       240 ~--------~~~~~~~~ga~~~l~~a~~~~~~~g~~~  268 (313)
T PRK05854        240 G--------FLVGTVESAILPALYAATSPDAEGGAFY  268 (313)
T ss_pred             c--------cccCCHHHHHHHhhheeeCCCCCCCcEE
Confidence            0        0123778888888877766543 35543

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.87  E-value=9e-21  Score=158.65  Aligned_cols=210  Identities=21%  Similarity=0.206  Sum_probs=147.2

Q ss_pred             EEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC-Cccc-ccCCCCCCCceEEEEcccCChhHHHHHhc-------Ccc
Q 021819           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-------GCK   82 (307)
Q Consensus        12 ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~-~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~~d   82 (307)
                      |+||||+|+||+++++.|+++|+ +|+++.|+... .+.. ..+..... ++.++++|++|.+++.++++       .+|
T Consensus         1 vlItGas~giG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~   78 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGF-EICVHYHSGRSDAESVVSAIQAQGG-NARLLQFDVADRVACRTLLEADIAEHGAYY   78 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCC-eEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            58999999999999999999999 78888775322 2221 11111112 68899999999998887765       469


Q ss_pred             EEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHH-----hcCCcEEEEecCcceeccCCCCCCcccccCCCCc
Q 021819           83 GVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK-----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (307)
Q Consensus        83 ~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~  153 (307)
                      ++||++|.....    ...+++...+++|+.++.++++++.     +.+.+++|++||.++.++.+..            
T Consensus        79 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~------------  146 (239)
T TIGR01831        79 GVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQ------------  146 (239)
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCC------------
Confidence            999999975432    2334567899999999999988762     2345789999998776654432            


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCccc
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  230 (307)
                              ..|+.+|.+.+.+.+.++.+   .|++++.++||.+.++.....    ...........+      ...+..
T Consensus       147 --------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----~~~~~~~~~~~~------~~~~~~  208 (239)
T TIGR01831       147 --------VNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEV----EHDLDEALKTVP------MNRMGQ  208 (239)
T ss_pred             --------cchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhh----hHHHHHHHhcCC------CCCCCC
Confidence                    46888998888777766554   489999999999988764322    111222222111      234568


Q ss_pred             HHHHHHHHHHhhcCCC--CCceEEe
Q 021819          231 VKDVAKAQVLLFESPA--ASGRYLC  253 (307)
Q Consensus       231 ~~dva~~~~~~~~~~~--~~g~~~~  253 (307)
                      ++|+++++.+++..+.  ..|..+.
T Consensus       209 ~~~va~~~~~l~~~~~~~~~g~~~~  233 (239)
T TIGR01831       209 PAEVASLAGFLMSDGASYVTRQVIS  233 (239)
T ss_pred             HHHHHHHHHHHcCchhcCccCCEEE
Confidence            9999999999887532  3455443

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.87  E-value=1.2e-20  Score=178.93  Aligned_cols=224  Identities=19%  Similarity=0.163  Sum_probs=152.7

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCC-CCCCceEEEEcccCChhHHHHHhc----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPG-AGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~-~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      .+++|+++||||+|+||++++++|+++|+ +|++++|+....+.... +.. ....++..+++|++|++++.++++    
T Consensus       411 ~l~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~  489 (676)
T TIGR02632       411 TLARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL  489 (676)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            34578999999999999999999999999 89999987654332221 110 011156788999999999988876    


Q ss_pred             ---CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcC-CcEEEEecCcceeccCCCCCCcccc
Q 021819           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFG-VRRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                         ++|+||||||.....    ...+.+...+++|+.+...+.+.+    ++.+ .++||++||..++++.++.      
T Consensus       490 ~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~------  563 (676)
T TIGR02632       490 AYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNA------  563 (676)
T ss_pred             hcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCC------
Confidence               589999999975431    122345788889998887776554    3443 3589999997776654442      


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCC-CCCCCCcc----------hHHHHHHH
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGP-LMQPYLNA----------SCAVLQQL  213 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~-~~~~~~~~----------~~~~~~~~  213 (307)
                                    ..|+.+|.+.+.+++.++.+   .|+++++++|+.|+.+ ........          ........
T Consensus       564 --------------~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  629 (676)
T TIGR02632       564 --------------SAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHY  629 (676)
T ss_pred             --------------HHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHH
Confidence                          57999999999999988776   4899999999998732 21110000          00001111


Q ss_pred             HcCCCCCCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCC
Q 021819          214 LQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNG  256 (307)
Q Consensus       214 ~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~  256 (307)
                      ..+.      ....+++++|+|+++.+++...  ...|.++..++
T Consensus       630 ~~r~------~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDG  668 (676)
T TIGR02632       630 AKRT------LLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDG  668 (676)
T ss_pred             HhcC------CcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECC
Confidence            1111      2345689999999999887643  33465544333

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.6e-20  Score=159.08  Aligned_cols=226  Identities=18%  Similarity=0.136  Sum_probs=153.1

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc---Ccc
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE---GCK   82 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~---~~d   82 (307)
                      +++|+++||||+|+||+++++.|++.|+ +|++++|+..+.+.+.. +......++.++.+|++|++++.++++   .+|
T Consensus         5 ~~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id   83 (259)
T PRK06125          5 LAGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDID   83 (259)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCC
Confidence            4578999999999999999999999999 89999997654433221 111112267889999999999887775   589


Q ss_pred             EEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCCCch
Q 021819           83 GVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (307)
Q Consensus        83 ~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~  154 (307)
                      ++|||+|....    ....+++...+++|+.+..++++++    ++.+.+++|++||..+..+...              
T Consensus        84 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~--------------  149 (259)
T PRK06125         84 ILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDAD--------------  149 (259)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCC--------------
Confidence            99999997542    1223356788999999999888887    3444468999998655322211              


Q ss_pred             hhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCC-------cchHHHHHHHHcCCCCCCCCc
Q 021819          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL-------NASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~  224 (307)
                       |     ..|..+|.+.+.+.+.++.+   .|++++.++||.+.++......       ..............      .
T Consensus       150 -~-----~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~  217 (259)
T PRK06125        150 -Y-----ICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGL------P  217 (259)
T ss_pred             -c-----hHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccC------C
Confidence             1     45888999888888777654   4899999999999876421100       00001111111111      1


Q ss_pred             ccCcccHHHHHHHHHHhhcCC--CCCceEEecCCccc
Q 021819          225 WLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIYQ  259 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~~  259 (307)
                      ...+.+++|+|+++++++...  ...|..+..+++.+
T Consensus       218 ~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~vdgg~~  254 (259)
T PRK06125        218 LGRPATPEEVADLVAFLASPRSGYTSGTVVTVDGGIS  254 (259)
T ss_pred             cCCCcCHHHHHHHHHHHcCchhccccCceEEecCCee
Confidence            234678999999999988643  34466554444443

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.87  E-value=1.7e-20  Score=157.15  Aligned_cols=205  Identities=20%  Similarity=0.194  Sum_probs=142.4

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCC-CCCCcccc-cCCCCCCCceEEEEcccCChhHHHHHhc-------C
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP-GSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~-~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~   80 (307)
                      |+++||||+|+||+++++.|+++|+ +|+++.|+ ....+... ...... .++.++.+|++|++++.++++       .
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGY-RVAANCGPNEERAEAWLQEQGALG-FDFRVVEGDVSSFESCKAAVAKVEAELGP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhhC-CceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5799999999999999999999999 88888873 22221111 111111 168899999999988877664       4


Q ss_pred             ccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           81 CKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        81 ~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      +|+|||++|....    ....+++...+++|+.++..+++.+    ++.+.+++|++||..+..+..+.           
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~-----------  147 (242)
T TIGR01829        79 IDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQ-----------  147 (242)
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCc-----------
Confidence            7999999987542    1223345778899999988866554    55567899999996654433322           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcc
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (307)
                               ..|+.+|...+.+.+.++++   .+++++.++|+.+.++.....   ............+      ...+.
T Consensus       148 ---------~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~---~~~~~~~~~~~~~------~~~~~  209 (242)
T TIGR01829       148 ---------TNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAM---REDVLNSIVAQIP------VGRLG  209 (242)
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcccccc---chHHHHHHHhcCC------CCCCc
Confidence                     46999999888887776544   489999999999988764322   1222222222211      22356


Q ss_pred             cHHHHHHHHHHhhcCC
Q 021819          230 PVKDVAKAQVLLFESP  245 (307)
Q Consensus       230 ~~~dva~~~~~~~~~~  245 (307)
                      .++|+++++.+++..+
T Consensus       210 ~~~~~a~~~~~l~~~~  225 (242)
T TIGR01829       210 RPEEIAAAVAFLASEE  225 (242)
T ss_pred             CHHHHHHHHHHHcCch
Confidence            7899999988877653

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.87  E-value=4.4e-21  Score=168.89  Aligned_cols=263  Identities=20%  Similarity=0.242  Sum_probs=174.9

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHC--CCCeEEEEeCCCCCCcc---cccC------------CCCCCCceEEEEcccC
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGSDSSH---LFAL------------PGAGDANLRVFEADVL   69 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~---~~~~------------~~~~~~~~~~i~~D~~   69 (307)
                      .++|+|+|||||||+|..|++.|+..  ...+++.+.|.+.....   +..+            ....-.++..+.||++
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            46889999999999999999999976  34689999996544321   1111            1111127888999997


Q ss_pred             Ch------hHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhc-CCcEEEEecCcceeccCCCC-
Q 021819           70 DS------GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPNPGW-  141 (307)
Q Consensus        70 d~------~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~iSS~~~~~~~~~~-  141 (307)
                      ++      .+++.+.+.+|+|||+||...+   .+.......+|..|++++++.|++. ..+-++|+||..+. ...+. 
T Consensus        90 ~~~LGis~~D~~~l~~eV~ivih~AAtvrF---de~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n-~~~~~i  165 (467)
T KOG1221|consen   90 EPDLGISESDLRTLADEVNIVIHSAATVRF---DEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSN-CNVGHI  165 (467)
T ss_pred             CcccCCChHHHHHHHhcCCEEEEeeeeecc---chhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhhee-cccccc
Confidence            54      5566677899999999998766   3456788999999999999999987 47889999996543 21111 


Q ss_pred             CCcccccCC------------CC--------chhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCC
Q 021819          142 KGKVFDETS------------WT--------DLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP  201 (307)
Q Consensus       142 ~~~~~~E~~------------~~--------~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~  201 (307)
                      .+.+..+..            +.        .+.....+.+.|..||+++|.++.+.  ..+++++|+||+.|......+
T Consensus       166 ~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~--~~~lPivIiRPsiI~st~~EP  243 (467)
T KOG1221|consen  166 EEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKE--AENLPLVIIRPSIITSTYKEP  243 (467)
T ss_pred             cccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhh--ccCCCeEEEcCCceeccccCC
Confidence            111111111            00        11111223578999999999999866  568999999999998755433


Q ss_pred             CCc------chHHHHHHHHcCCCCC---CCCcccCcccHHHHHHHHHHhhcC--CCC----CceEEecC---CcccHHHH
Q 021819          202 YLN------ASCAVLQQLLQGSKDT---QEYHWLGAVPVKDVAKAQVLLFES--PAA----SGRYLCTN---GIYQFGDF  263 (307)
Q Consensus       202 ~~~------~~~~~~~~~~~~~~~~---~~~~~~~~i~~~dva~~~~~~~~~--~~~----~g~~~~~~---~~~~~~~~  263 (307)
                      ...      ....++-....|....   .++...+.|++|.|+.+++.+.-.  ...    .-+|+++.   .++++.++
T Consensus       244 ~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~  323 (467)
T KOG1221|consen  244 FPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDF  323 (467)
T ss_pred             CCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHH
Confidence            210      1111111111111111   144778999999999999866621  111    22688754   46999999


Q ss_pred             HHHHHHhCCCCC
Q 021819          264 AERVSKLFPEFP  275 (307)
Q Consensus       264 ~~~~~~~~~~~~  275 (307)
                      .+...+.+...|
T Consensus       324 ~e~~~~~~~~~P  335 (467)
T KOG1221|consen  324 IELALRYFEKIP  335 (467)
T ss_pred             HHHHHHhcccCC
Confidence            999998874333

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.87  E-value=1.1e-20  Score=158.90  Aligned_cols=203  Identities=17%  Similarity=0.166  Sum_probs=143.6

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCCCCCceEEEEcccC--ChhHHHHHh----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVL--DSGAVSRAV----   78 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~i~~D~~--d~~~~~~~~----   78 (307)
                      .+++++++||||+|+||.+++++|++.|+ +|++++|+......+. .+......++.++.+|++  +++++.+++    
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   87 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE   87 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence            35678999999999999999999999999 8999999765432221 111111125677788885  555554443    


Q ss_pred             ---cCccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCccc
Q 021819           79 ---EGCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVF  146 (307)
Q Consensus        79 ---~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~  146 (307)
                         ..+|+|||+|+....     ....+.+.+.+++|+.++.++++++.    +.+.++||++||..+..+.+..     
T Consensus        88 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~-----  162 (247)
T PRK08945         88 EQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANW-----  162 (247)
T ss_pred             HHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCC-----
Confidence               367999999987533     22234567889999999888888774    4567899999997654443332     


Q ss_pred             ccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCC
Q 021819          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (307)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (307)
                                     ..|+.+|...+.+++.++.+.   ++++++++|+.+.++......           ...      
T Consensus       163 ---------------~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~-----------~~~------  210 (247)
T PRK08945        163 ---------------GAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAF-----------PGE------  210 (247)
T ss_pred             ---------------cccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhc-----------Ccc------
Confidence                           469999999999988776654   799999999988776421110           000      


Q ss_pred             cccCcccHHHHHHHHHHhhcCCC
Q 021819          224 HWLGAVPVKDVAKAQVLLFESPA  246 (307)
Q Consensus       224 ~~~~~i~~~dva~~~~~~~~~~~  246 (307)
                      ....+..++|++..+++++..+.
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~  233 (247)
T PRK08945        211 DPQKLKTPEDIMPLYLYLMGDDS  233 (247)
T ss_pred             cccCCCCHHHHHHHHHHHhCccc
Confidence            11246789999999999875443

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.87  E-value=1.9e-20  Score=143.55  Aligned_cols=208  Identities=20%  Similarity=0.189  Sum_probs=161.4

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      .+.|.++||||+.+||+++++.|..+|+ +|...+++....+.... +...+  +-..+.+|+.++.++...++      
T Consensus        12 ~~sk~~~vtGg~sGIGrAia~~la~~Ga-rv~v~dl~~~~A~ata~~L~g~~--~h~aF~~DVS~a~~v~~~l~e~~k~~   88 (256)
T KOG1200|consen   12 LMSKVAAVTGGSSGIGRAIAQLLAKKGA-RVAVADLDSAAAEATAGDLGGYG--DHSAFSCDVSKAHDVQNTLEEMEKSL   88 (256)
T ss_pred             HhcceeEEecCCchHHHHHHHHHHhcCc-EEEEeecchhhHHHHHhhcCCCC--ccceeeeccCcHHHHHHHHHHHHHhc
Confidence            3457899999999999999999999999 88888876655544333 33221  44578899999988777554      


Q ss_pred             -CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc------CCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF------GVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                       .+++++||||+....    ...++|.+.+.+|+.|+..+.+++.+.      +..+||++||+-+--++.+.       
T Consensus        89 g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQ-------  161 (256)
T KOG1200|consen   89 GTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQ-------  161 (256)
T ss_pred             CCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccc-------
Confidence             579999999987752    345678999999999999988887443      22389999998776666553       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (307)
                           .+|..+|.+..+.||.++.++.     +.+|+++.+.||+|-+|.....   .+..++++...-|      ...+
T Consensus       162 -----tnYAAsK~GvIgftktaArEla-----~knIrvN~VlPGFI~tpMT~~m---p~~v~~ki~~~iP------mgr~  222 (256)
T KOG1200|consen  162 -----TNYAASKGGVIGFTKTAARELA-----RKNIRVNVVLPGFIATPMTEAM---PPKVLDKILGMIP------MGRL  222 (256)
T ss_pred             -----hhhhhhcCceeeeeHHHHHHHh-----hcCceEeEeccccccChhhhhc---CHHHHHHHHccCC------cccc
Confidence                 6799999999999999999988     4699999999999999986654   3455666665544      3456


Q ss_pred             ccHHHHHHHHHHhhc
Q 021819          229 VPVKDVAKAQVLLFE  243 (307)
Q Consensus       229 i~~~dva~~~~~~~~  243 (307)
                      -.++|+|..++++..
T Consensus       223 G~~EevA~~V~fLAS  237 (256)
T KOG1200|consen  223 GEAEEVANLVLFLAS  237 (256)
T ss_pred             CCHHHHHHHHHHHhc
Confidence            688999999888773

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.86  E-value=2.4e-20  Score=153.66  Aligned_cols=202  Identities=12%  Similarity=0.039  Sum_probs=150.2

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      .++++|+||||++++|+.++.+++++|. .+++.+.+........+...... .+..+.+|++|.+++.+..+       
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~Vk~e~G  113 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKVKKEVG  113 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence            4578999999999999999999999999 88888887655543333221111 68899999999999887765       


Q ss_pred             CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                      .+|++|||||+...    +.+.+..++.+++|+.|.....++.    .+.+-+++|.++|+.+..+.++.          
T Consensus       114 ~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl----------  183 (300)
T KOG1201|consen  114 DVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGL----------  183 (300)
T ss_pred             CceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccc----------
Confidence            57999999998865    3344456899999998887777665    45556799999999887776664          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHh------cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK------HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~------~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                                ..|..||.++..+.+.+..+      .|++++.+.|+.+-+..-...            ...+     ..
T Consensus       184 ----------~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~------------~~~~-----~l  236 (300)
T KOG1201|consen  184 ----------ADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGA------------TPFP-----TL  236 (300)
T ss_pred             ----------hhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCC------------CCCc-----cc
Confidence                      45777777776666555433      379999999998864432211            0011     35


Q ss_pred             cCcccHHHHHHHHHHhhcCCCC
Q 021819          226 LGAVPVKDVAKAQVLLFESPAA  247 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~~~  247 (307)
                      .+.+.++.+|+.++.++..+..
T Consensus       237 ~P~L~p~~va~~Iv~ai~~n~~  258 (300)
T KOG1201|consen  237 APLLEPEYVAKRIVEAILTNQA  258 (300)
T ss_pred             cCCCCHHHHHHHHHHHHHcCCc
Confidence            5678999999999999987664

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.86  E-value=4.1e-20  Score=156.22  Aligned_cols=222  Identities=16%  Similarity=0.132  Sum_probs=148.5

Q ss_pred             cccCCcEEEEeCC--chhhHHHHHHHHHHCCCCeEEEEeCCCC--CCcccccCCCCCCCceEEEEcccCChhHHHHHhc-
Q 021819            5 AEKEEETVCVTGA--NGFIGTWLVKTLLDNNYTSINATVFPGS--DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (307)
Q Consensus         5 ~~~~~~~ilItGa--tG~iG~~l~~~L~~~g~~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-   79 (307)
                      ..+++|+++||||  +++||.++++.|+++|+ +|++.+|+..  ..+.+.....  . ++.++++|++|+++++++++ 
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~--~-~~~~~~~Dv~~~~~i~~~~~~   78 (256)
T PRK07889          3 GLLEGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLP--E-PAPVLELDVTNEEHLASLADR   78 (256)
T ss_pred             ccccCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcC--C-CCcEEeCCCCCHHHHHHHHHH
Confidence            3456789999999  89999999999999999 8988887531  1122221111  1 56789999999998887764 


Q ss_pred             ------CccEEEEeccCCCC--------CCCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCC
Q 021819           80 ------GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKG  143 (307)
Q Consensus        80 ------~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~  143 (307)
                            ++|++|||||....        +...+++.+.+++|+.++.++.+++...  ..+++|++|+... .+.     
T Consensus        79 ~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~-~~~-----  152 (256)
T PRK07889         79 VREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDAT-VAW-----  152 (256)
T ss_pred             HHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccc-ccC-----
Confidence                  57999999997532        1122345678999999999988887543  2257999886332 111     


Q ss_pred             cccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCC
Q 021819          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT  220 (307)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  220 (307)
                                +.|     ..|+.+|...+.+.+.++.+   .|+++++|.||.+.++....... ............+  
T Consensus       153 ----------~~~-----~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p--  214 (256)
T PRK07889        153 ----------PAY-----DWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPG-FELLEEGWDERAP--  214 (256)
T ss_pred             ----------Ccc-----chhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccC-cHHHHHHHHhcCc--
Confidence                      112     46888888888888777655   58999999999998875332111 1111111111111  


Q ss_pred             CCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          221 QEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       221 ~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                         ..+.+..++|+|+++++++...  ...|.++..+++
T Consensus       215 ---~~~~~~~p~evA~~v~~l~s~~~~~~tG~~i~vdgg  250 (256)
T PRK07889        215 ---LGWDVKDPTPVARAVVALLSDWFPATTGEIVHVDGG  250 (256)
T ss_pred             ---cccccCCHHHHHHHHHHHhCcccccccceEEEEcCc
Confidence               0113678999999999988754  335665554444

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.5e-20  Score=159.18  Aligned_cols=236  Identities=19%  Similarity=0.153  Sum_probs=149.8

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCCCCCceEEEEcccCChhHHHHHhc------Cc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE------GC   81 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~------~~   81 (307)
                      +|+++|||+ |+||+++++.|. +|+ +|++++|+....+... .+..... ++.++++|++|++++.++++      .+
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~i~~~~~~~~~~g~i   77 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGF-DVSTQEVDVSSRESVKALAATAQTLGPV   77 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEeecCCHHHHHHHHHHHHhcCCC
Confidence            358999998 699999999996 898 8999998754433222 1111111 57889999999998887775      48


Q ss_pred             cEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCC--CCcc---cccCCCCch
Q 021819           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGW--KGKV---FDETSWTDL  154 (307)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~--~~~~---~~E~~~~~~  154 (307)
                      |++|||||....   ..++...+++|+.++.++++++.+.  ..+++|++||..+.......  ....   +..++....
T Consensus        78 d~li~nAG~~~~---~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (275)
T PRK06940         78 TGLVHTAGVSPS---QASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSL  154 (275)
T ss_pred             CEEEECCCcCCc---hhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccccc
Confidence            999999997532   3567899999999999999988653  12457888887654331000  0000   001100000


Q ss_pred             hh--h---cccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCC-cchHHHHHHHHcCCCCCCCCcc
Q 021819          155 EY--C---KSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL-NASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       155 ~~--~---~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                      .+  +   ......|+.+|...+.+.+.++.+   .|+++++|+||.+.++...... ..............+      .
T Consensus       155 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p------~  228 (275)
T PRK06940        155 PFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSP------A  228 (275)
T ss_pred             ccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCC------c
Confidence            00  0   011256999999988888877655   4899999999999887542210 000111122221111      2


Q ss_pred             cCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          226 LGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                      ..+..++|+|+++++++...  ...|..+..+++
T Consensus       229 ~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg  262 (275)
T PRK06940        229 GRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGG  262 (275)
T ss_pred             ccCCCHHHHHHHHHHHcCcccCcccCceEEEcCC
Confidence            34689999999999988543  345655444444

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.86  E-value=3.3e-20  Score=150.89  Aligned_cols=181  Identities=18%  Similarity=0.171  Sum_probs=136.6

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc---CccEEEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GCKGVFH   86 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~---~~d~vi~   86 (307)
                      |+++||||+|+||+++++.|.++ + +|++.+|+..                 .+++|++|.++++++++   ++|++||
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~-~vi~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~~~id~lv~   61 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-H-EVITAGRSSG-----------------DVQVDITDPASIRALFEKVGKVDAVVS   61 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-C-cEEEEecCCC-----------------ceEecCCChHHHHHHHHhcCCCCEEEE
Confidence            37999999999999999999999 7 8999888532                 35689999999988876   6899999


Q ss_pred             eccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcccccCCCCchhhhccc
Q 021819           87 VASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR  160 (307)
Q Consensus        87 ~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  160 (307)
                      +||.....    ...+++.+.+++|+.++.++++++...  +.++|+++||..+..+.+..                   
T Consensus        62 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~~-------------------  122 (199)
T PRK07578         62 AAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPGG-------------------  122 (199)
T ss_pred             CCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCCCc-------------------
Confidence            99975431    223456788999999999999988653  23679999987664433332                   


Q ss_pred             CccHHHHHHHHHHHHHHHHHh--cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHH
Q 021819          161 KKWYPVSKTLAEKAAWEFAEK--HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQ  238 (307)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~--~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~  238 (307)
                       ..|+.+|...+.+.+.++.+  .|++++.++||.+-++....         ...       +  ....+++++|+|+.+
T Consensus       123 -~~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~~~---------~~~-------~--~~~~~~~~~~~a~~~  183 (199)
T PRK07578        123 -ASAATVNGALEGFVKAAALELPRGIRINVVSPTVLTESLEKY---------GPF-------F--PGFEPVPAARVALAY  183 (199)
T ss_pred             -hHHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchhhh---------hhc-------C--CCCCCCCHHHHHHHH
Confidence             56999999999988887765  58999999999885543110         000       0  112368999999999


Q ss_pred             HHhhcCCCC
Q 021819          239 VLLFESPAA  247 (307)
Q Consensus       239 ~~~~~~~~~  247 (307)
                      ..+++....
T Consensus       184 ~~~~~~~~~  192 (199)
T PRK07578        184 VRSVEGAQT  192 (199)
T ss_pred             HHHhcccee
Confidence            999886433

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.86  E-value=4.3e-20  Score=157.16  Aligned_cols=217  Identities=18%  Similarity=0.158  Sum_probs=142.2

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC-CCCccc-ccCCCCCCCceEEEEcccCChhHH----HHHh-----
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHL-FALPGAGDANLRVFEADVLDSGAV----SRAV-----   78 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~-~~~~~~-~~~~~~~~~~~~~i~~D~~d~~~~----~~~~-----   78 (307)
                      +.++||||+|+||+++++.|+++|+ +|+++.|+. +....+ +.+......++..+.+|++|.+++    .+++     
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~   80 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGY-RVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFR   80 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCC-eEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence            5799999999999999999999999 888876543 222222 112111111566789999998754    3333     


Q ss_pred             --cCccEEEEeccCCCCCC----CC-----------ChhhhhhhhhHHHHHHHHHHHHhcC----------CcEEEEecC
Q 021819           79 --EGCKGVFHVASPCTLED----PV-----------DPEKELILPAVQGTLNVLEAAKRFG----------VRRVVVTSS  131 (307)
Q Consensus        79 --~~~d~vi~~a~~~~~~~----~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~----------~~~~v~iSS  131 (307)
                        .++|+||||||......    ..           ..+.+.+++|+.++..+++++....          ..++|++||
T Consensus        81 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s  160 (267)
T TIGR02685        81 AFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCD  160 (267)
T ss_pred             ccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehh
Confidence              25899999999754211    11           1256789999999999998864321          246888887


Q ss_pred             cceeccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHH
Q 021819          132 ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCA  208 (307)
Q Consensus       132 ~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~  208 (307)
                      ..+..+.+.                    ...|+.+|...+.+.+.++.+   .|+++++|+||.+.++....     ..
T Consensus       161 ~~~~~~~~~--------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~-----~~  215 (267)
T TIGR02685       161 AMTDQPLLG--------------------FTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP-----FE  215 (267)
T ss_pred             hhccCCCcc--------------------cchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc-----hh
Confidence            554322222                    157999999999999888766   58999999999987663221     11


Q ss_pred             HHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCCC--CCceEEecCCc
Q 021819          209 VLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGI  257 (307)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~--~~g~~~~~~~~  257 (307)
                      .........+.     ...+..++|+++++++++..+.  ..|..+..+++
T Consensus       216 ~~~~~~~~~~~-----~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg  261 (267)
T TIGR02685       216 VQEDYRRKVPL-----GQREASAEQIADVVIFLVSPKAKYITGTCIKVDGG  261 (267)
T ss_pred             HHHHHHHhCCC-----CcCCCCHHHHHHHHHHHhCcccCCcccceEEECCc
Confidence            11122111110     1235699999999999887542  34655444443

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.3e-20  Score=159.30  Aligned_cols=207  Identities=18%  Similarity=0.124  Sum_probs=141.4

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCCCCCceEEEEcccCChhHHHHHhc-------Cc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~~   81 (307)
                      |+++||||+|+||+++++.|+++|+ +|++++|+.+..+... .+.......+.++.+|++|++++.++++       ++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSM   79 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            4799999999999999999999999 8988888754432221 1111111134567899999988776664       47


Q ss_pred             cEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHh----c-CCcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           82 KGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR----F-GVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        82 d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      |+|||++|....    ....+++...+++|+.++.++++++..    . ..++||++||..+..+.+..           
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~-----------  148 (272)
T PRK07832         80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWH-----------  148 (272)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCC-----------
Confidence            999999987543    223344578899999999999998742    2 24689999997654333322           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHH---hcCCcEEEEecCceeCCCCCCCC----cchHHHHHHHHcCCCCCCCCcc
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYL----NASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~i~~~ivrp~~v~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                               ..|+.+|...+.+.+.++.   ..++++++++||.+.++......    .............       ..
T Consensus       149 ---------~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-------~~  212 (272)
T PRK07832        149 ---------AAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDR-------FR  212 (272)
T ss_pred             ---------cchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHh-------cc
Confidence                     4689999877777665553   35899999999999987543210    0000001111100       12


Q ss_pred             cCcccHHHHHHHHHHhhcC
Q 021819          226 LGAVPVKDVAKAQVLLFES  244 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~  244 (307)
                      ...++++|+|++++.++..
T Consensus       213 ~~~~~~~~vA~~~~~~~~~  231 (272)
T PRK07832        213 GHAVTPEKAAEKILAGVEK  231 (272)
T ss_pred             cCCCCHHHHHHHHHHHHhc
Confidence            2357999999999999964

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=2.2e-20  Score=161.85  Aligned_cols=204  Identities=18%  Similarity=0.138  Sum_probs=141.7

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCC-CCccc-ccCCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~-~~~~~-~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++.+++.. ..+.. ..+...+. ++.++++|++|.+++.++++    
T Consensus         9 ~l~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~-~~~~~~~Dv~d~~~~~~~~~~~~~   86 (306)
T PRK07792          9 DLSGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGA-KAVAVAGDISQRATADELVATAVG   86 (306)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCC-eEEEEeCCCCCHHHHHHHHHHHHH
Confidence            45688999999999999999999999999 8888877432 22221 11211122 67889999999988887765    


Q ss_pred             --CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc-----------CCcEEEEecCcceeccCCCCC
Q 021819           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF-----------GVRRVVVTSSISAIVPNPGWK  142 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~-----------~~~~~v~iSS~~~~~~~~~~~  142 (307)
                        .+|+||||||.....    ...+++...+++|+.++.++++++..+           ..+++|++||..+..+.+.. 
T Consensus        87 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-  165 (306)
T PRK07792         87 LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQ-  165 (306)
T ss_pred             hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCC-
Confidence              579999999976532    223456788999999999999887421           12589999997765443332 


Q ss_pred             CcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCC
Q 021819          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD  219 (307)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  219 (307)
                                         ..|+.+|...+.+.+.++.+   +|++++++.|+. .++...........    .      
T Consensus       166 -------------------~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~~~~----~------  215 (306)
T PRK07792        166 -------------------ANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFGDAPD----V------  215 (306)
T ss_pred             -------------------chHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhccccch----h------
Confidence                               46999999999998877764   589999999983 22221110000000    0      


Q ss_pred             CCCCcccCcccHHHHHHHHHHhhcC
Q 021819          220 TQEYHWLGAVPVKDVAKAQVLLFES  244 (307)
Q Consensus       220 ~~~~~~~~~i~~~dva~~~~~~~~~  244 (307)
                        ......+++++|++.++.+++..
T Consensus       216 --~~~~~~~~~pe~va~~v~~L~s~  238 (306)
T PRK07792        216 --EAGGIDPLSPEHVVPLVQFLASP  238 (306)
T ss_pred             --hhhccCCCCHHHHHHHHHHHcCc
Confidence              00123346899999998888754

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.86  E-value=8.1e-20  Score=151.19  Aligned_cols=190  Identities=17%  Similarity=0.118  Sum_probs=143.4

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-----CccE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----GCKG   83 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----~~d~   83 (307)
                      |++++||||+|+||++++++|+++|+ +|++++|+.+..+.+...      +++++.+|++|.+++.++++     .+|+
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~~~~~~d~   73 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQAL------GAEALALDVADPASVAGLAWKLDGEALDA   73 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhc------cceEEEecCCCHHHHHHHHHHhcCCCCCE
Confidence            46899999999999999999999999 899999976554443322      46788999999998887642     4799


Q ss_pred             EEEeccCCCC------CCCCChhhhhhhhhHHHHHHHHHHHHhc---CCcEEEEecCcceeccCCCCCCcccccCCCCch
Q 021819           84 VFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (307)
Q Consensus        84 vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~  154 (307)
                      |||++|....      ....++++..+++|+.++.++++++.+.   ..+++|++||..+.++....            .
T Consensus        74 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------------~  141 (222)
T PRK06953         74 AVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATG------------T  141 (222)
T ss_pred             EEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccC------------C
Confidence            9999997632      1133456889999999999999998652   23579999986654442211            0


Q ss_pred             hhhcccCccHHHHHHHHHHHHHHHHHhc-CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHH
Q 021819          155 EYCKSRKKWYPVSKTLAEKAAWEFAEKH-GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKD  233 (307)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~~-~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d  233 (307)
                           ....|+.+|...+.+++.++.+. +++++.++||.+.++....                        ...+..++
T Consensus       142 -----~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~~------------------------~~~~~~~~  192 (222)
T PRK06953        142 -----TGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDMGGA------------------------QAALDPAQ  192 (222)
T ss_pred             -----CccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCCC------------------------CCCCCHHH
Confidence                 01259999999999998877664 8999999999998875221                        11357789


Q ss_pred             HHHHHHHhhcCCC
Q 021819          234 VAKAQVLLFESPA  246 (307)
Q Consensus       234 va~~~~~~~~~~~  246 (307)
                      .++.++.++....
T Consensus       193 ~~~~~~~~~~~~~  205 (222)
T PRK06953        193 SVAGMRRVIAQAT  205 (222)
T ss_pred             HHHHHHHHHHhcC
Confidence            9999888876544

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=2e-20  Score=156.38  Aligned_cols=205  Identities=19%  Similarity=0.189  Sum_probs=143.9

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +++++|+||||+|+||+++++.|+++|+ +|++++|++...+.+........ +++++++|++|+++++++++       
T Consensus         3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~   80 (238)
T PRK05786          3 LKGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYG-NIHYVVGDVSSTESARNVIEKAAKVLN   80 (238)
T ss_pred             cCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            3468999999999999999999999999 99999997654433311111111 57889999999988877664       


Q ss_pred             CccEEEEeccCCCCCCC--CChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcccccCCCCchh
Q 021819           80 GCKGVFHVASPCTLEDP--VDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~  155 (307)
                      .+|.+||+++.......  .+.....++.|+.++.++++.+.+.  ..+++|++||..+.+....               
T Consensus        81 ~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~---------------  145 (238)
T PRK05786         81 AIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASP---------------  145 (238)
T ss_pred             CCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCCC---------------
Confidence            36999999986532111  1234677899999988888887553  2357999998655321111               


Q ss_pred             hhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHH
Q 021819          156 YCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK  232 (307)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  232 (307)
                          ....|+.+|...+.+++.++++   .+++++++||+.++++.....     . ....        ......+++.+
T Consensus       146 ----~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~-----~-~~~~--------~~~~~~~~~~~  207 (238)
T PRK05786        146 ----DQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER-----N-WKKL--------RKLGDDMAPPE  207 (238)
T ss_pred             ----CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh-----h-hhhh--------ccccCCCCCHH
Confidence                0146999999999888777655   389999999999998753211     0 0100        00112357899


Q ss_pred             HHHHHHHHhhcCCC
Q 021819          233 DVAKAQVLLFESPA  246 (307)
Q Consensus       233 dva~~~~~~~~~~~  246 (307)
                      |+++++++++..+.
T Consensus       208 ~va~~~~~~~~~~~  221 (238)
T PRK05786        208 DFAKVIIWLLTDEA  221 (238)
T ss_pred             HHHHHHHHHhcccc
Confidence            99999999997533

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.86  E-value=4.2e-20  Score=152.85  Aligned_cols=195  Identities=12%  Similarity=0.114  Sum_probs=140.5

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc----CccEEEE
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----GCKGVFH   86 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----~~d~vi~   86 (307)
                      +++||||+|+||+++++.|+++|+ +|++.+|+.++.+.+....     ++.++++|++|+++++++++    .+|++||
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~   75 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFPHHLDTIVN   75 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHhhcCcEEEE
Confidence            799999999999999999999999 8999988765443332211     45688999999999888775    5899999


Q ss_pred             eccCCCC---------CCCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcccccCCCCchh
Q 021819           87 VASPCTL---------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (307)
Q Consensus        87 ~a~~~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~  155 (307)
                      |||....         ....+++.+.+++|+.++.++++++...  ..+++|++||...    +..              
T Consensus        76 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~----~~~--------------  137 (223)
T PRK05884         76 VPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP----PAG--------------  137 (223)
T ss_pred             CCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC----CCc--------------
Confidence            9984211         0123467899999999999999998543  2368999998541    111              


Q ss_pred             hhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHH
Q 021819          156 YCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK  232 (307)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  232 (307)
                            ..|+.+|...+.+.+.++.+   .|++++.|.||.+.++...           .. ..         .+...++
T Consensus       138 ------~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~-----------~~-~~---------~p~~~~~  190 (223)
T PRK05884        138 ------SAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYD-----------GL-SR---------TPPPVAA  190 (223)
T ss_pred             ------cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhh-----------hc-cC---------CCCCCHH
Confidence                  46888998888888777664   4899999999998765311           00 00         1113789


Q ss_pred             HHHHHHHHhhcCC--CCCceEEecCC
Q 021819          233 DVAKAQVLLFESP--AASGRYLCTNG  256 (307)
Q Consensus       233 dva~~~~~~~~~~--~~~g~~~~~~~  256 (307)
                      |+++++.+++...  ...|..+..++
T Consensus       191 ~ia~~~~~l~s~~~~~v~G~~i~vdg  216 (223)
T PRK05884        191 EIARLALFLTTPAARHITGQTLHVSH  216 (223)
T ss_pred             HHHHHHHHHcCchhhccCCcEEEeCC
Confidence            9999999887643  33465544443

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.85  E-value=3e-20  Score=160.57  Aligned_cols=218  Identities=17%  Similarity=0.113  Sum_probs=141.2

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC----------Cccccc-CCCCCCCceEEEEcccCChh
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD----------SSHLFA-LPGAGDANLRVFEADVLDSG   72 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~----------~~~~~~-~~~~~~~~~~~i~~D~~d~~   72 (307)
                      |..+++|+++||||+++||+++++.|++.|+ +|++.+|+...          .+.+.. +...+. ++.++++|++|++
T Consensus         3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~   80 (305)
T PRK08303          3 MKPLRGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRSTRARRSEYDRPETIEETAELVTAAGG-RGIAVQVDHLVPE   80 (305)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecccccccccccccchHHHHHHHHHhcCC-ceEEEEcCCCCHH
Confidence            4456678999999999999999999999999 89888886421          111111 111111 5778999999999


Q ss_pred             HHHHHhc-------CccEEEEec-cCCC-----C---CCCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCc
Q 021819           73 AVSRAVE-------GCKGVFHVA-SPCT-----L---EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSI  132 (307)
Q Consensus        73 ~~~~~~~-------~~d~vi~~a-~~~~-----~---~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~  132 (307)
                      +++++++       .+|++|||| |...     .   ....+++.+.+++|+.++..+.+++..    .+.++||++||.
T Consensus        81 ~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~  160 (305)
T PRK08303         81 QVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDG  160 (305)
T ss_pred             HHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCc
Confidence            8887765       479999999 6421     1   112334567889999988888877743    334689999985


Q ss_pred             ceeccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHH
Q 021819          133 SAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAV  209 (307)
Q Consensus       133 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~  209 (307)
                      .+.......            +     ....|+.+|.....+.+.++.+   .|+++++|.||.|.++............
T Consensus       161 ~~~~~~~~~------------~-----~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~  223 (305)
T PRK08303        161 TAEYNATHY------------R-----LSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEEN  223 (305)
T ss_pred             cccccCcCC------------C-----CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccc
Confidence            542211110            0     0145888888888887776655   4899999999999776421000000000


Q ss_pred             HHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCC
Q 021819          210 LQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (307)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~  245 (307)
                      +.......    + ....+..++|+|.++++++..+
T Consensus       224 ~~~~~~~~----p-~~~~~~~peevA~~v~fL~s~~  254 (305)
T PRK08303        224 WRDALAKE----P-HFAISETPRYVGRAVAALAADP  254 (305)
T ss_pred             hhhhhccc----c-ccccCCCHHHHHHHHHHHHcCc
Confidence            00000000    0 0122457999999999998765

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.85  E-value=3.1e-20  Score=177.41  Aligned_cols=199  Identities=18%  Similarity=0.196  Sum_probs=148.4

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      +++|+++||||+|+||+++++.|+++|+ +|++++|+++..+.+.. +..... ++.++.+|++|.++++++++      
T Consensus       369 ~~~k~vlItGas~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~  446 (657)
T PRK07201        369 LVGKVVLITGASSGIGRATAIKVAEAGA-TVFLVARNGEALDELVAEIRAKGG-TAHAYTCDLTDSAAVDHTVKDILAEH  446 (657)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            3478999999999999999999999999 89999997655433221 111112 68899999999999888776      


Q ss_pred             -CccEEEEeccCCCCCC---C---CChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 -GCKGVFHVASPCTLED---P---VDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~~---~---~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                       .+|++|||||......   .   .+++...+++|+.++.++++++    ++.+.++||++||.++..+.+..       
T Consensus       447 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  519 (657)
T PRK07201        447 GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRF-------  519 (657)
T ss_pred             CCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCc-------
Confidence             5899999999753211   1   1346788999999998887776    44566799999997764433332       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                                   ..|+.+|.+.+.+.+.++.+   .++++++++||.|.++.......         .         ..
T Consensus       520 -------------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~---------~---------~~  568 (657)
T PRK07201        520 -------------SAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR---------Y---------NN  568 (657)
T ss_pred             -------------chHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc---------c---------cC
Confidence                         56999999999998877655   48999999999998876432200         0         01


Q ss_pred             cCcccHHHHHHHHHHhhcCC
Q 021819          226 LGAVPVKDVAKAQVLLFESP  245 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~  245 (307)
                      ...++++++|+.++..+...
T Consensus       569 ~~~~~~~~~a~~i~~~~~~~  588 (657)
T PRK07201        569 VPTISPEEAADMVVRAIVEK  588 (657)
T ss_pred             CCCCCHHHHHHHHHHHHHhC
Confidence            23578999999999987653

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.85  E-value=3.4e-20  Score=161.26  Aligned_cols=196  Identities=17%  Similarity=0.111  Sum_probs=140.2

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccC-CCC-CCCceEEEEcccCC--hhHHHH---HhcC
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-PGA-GDANLRVFEADVLD--SGAVSR---AVEG   80 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-~~~-~~~~~~~i~~D~~d--~~~~~~---~~~~   80 (307)
                      .+++++||||||+||++++++|+++|+ +|++++|+++..+.+... ... ...++..+.+|+++  .+.+.+   .+.+
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~  130 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG  130 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence            468999999999999999999999999 899999987654433221 111 11157788899985  333333   3333


Q ss_pred             --ccEEEEeccCCCC------CCCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceecc--CCCCCCccc
Q 021819           81 --CKGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVP--NPGWKGKVF  146 (307)
Q Consensus        81 --~d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~--~~~~~~~~~  146 (307)
                        +|++|||||....      +...++....+++|+.++.++.+++.    +.+.+++|++||..+...  .+.      
T Consensus       131 ~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~------  204 (320)
T PLN02780        131 LDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPL------  204 (320)
T ss_pred             CCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCcc------
Confidence              5699999997532      11233457899999999999888874    445679999999766431  122      


Q ss_pred             ccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCC
Q 021819          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (307)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (307)
                                    ...|+.||...+.+.+.++.+.   |+++++++||.|.++.....             .       
T Consensus       205 --------------~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~-------------~-------  250 (320)
T PLN02780        205 --------------YAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIR-------------R-------  250 (320)
T ss_pred             --------------chHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccccc-------------C-------
Confidence                          1579999999999988887663   89999999999988753210             0       


Q ss_pred             cccCcccHHHHHHHHHHhhcC
Q 021819          224 HWLGAVPVKDVAKAQVLLFES  244 (307)
Q Consensus       224 ~~~~~i~~~dva~~~~~~~~~  244 (307)
                      ......+++++|+.++..+..
T Consensus       251 ~~~~~~~p~~~A~~~~~~~~~  271 (320)
T PLN02780        251 SSFLVPSSDGYARAALRWVGY  271 (320)
T ss_pred             CCCCCCCHHHHHHHHHHHhCC
Confidence            011135899999999999864

>PRK05855 short chain dehydrogenase; Validated

Probab=99.85  E-value=3.9e-20  Score=174.27  Aligned_cols=216  Identities=19%  Similarity=0.093  Sum_probs=149.6

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------C
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~   80 (307)
                      ++++++||||+|+||++++++|.++|+ +|++++|+.+..+.+.........++.++++|++|++++.++++       .
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~  392 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGV  392 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            457999999999999999999999999 89999997655443322111111167899999999999888775       3


Q ss_pred             ccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHH----hcC-CcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFG-VRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        81 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                      +|++|||||.....    ...+++...+++|+.|+.++++++.    +.+ .++||++||.+++.+.+..          
T Consensus       393 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~----------  462 (582)
T PRK05855        393 PDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSL----------  462 (582)
T ss_pred             CcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCC----------
Confidence            79999999986432    2234567889999999999888763    333 3689999997765443332          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCC--cchHHHHHHHHcCCCCCCCCccc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                                ..|+.+|.+.+.+.+.++.+   .|+++++++||.|-++......  ............ .....  ...
T Consensus       463 ----------~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~  529 (582)
T PRK05855        463 ----------PAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRG-RADKL--YQR  529 (582)
T ss_pred             ----------cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHh-hhhhh--ccc
Confidence                      57999999999888877655   4899999999999886543221  000000000000 00000  011


Q ss_pred             CcccHHHHHHHHHHhhcCCCC
Q 021819          227 GAVPVKDVAKAQVLLFESPAA  247 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~~~  247 (307)
                      ....++|+|++++.++..+..
T Consensus       530 ~~~~p~~va~~~~~~~~~~~~  550 (582)
T PRK05855        530 RGYGPEKVAKAIVDAVKRNKA  550 (582)
T ss_pred             cCCCHHHHHHHHHHHHHcCCC
Confidence            235789999999999987553

>PRK05599 hypothetical protein; Provisional

Probab=99.85  E-value=1.2e-19  Score=152.38  Aligned_cols=203  Identities=15%  Similarity=0.080  Sum_probs=141.2

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc-------Cc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~~   81 (307)
                      |+++||||+++||++++++|. +|+ +|++..|+.+..+.+.. +.......+.++++|++|+++++++++       .+
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   78 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGE-DVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEI   78 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence            479999999999999999998 588 89999987655443322 111111147789999999988887664       57


Q ss_pred             cEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcC-CcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           82 KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        82 d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      |++|||||.....    ...+...+..++|+.+..++++.+    .+.+ .++||++||..+..+.+..           
T Consensus        79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~-----------  147 (246)
T PRK05599         79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRAN-----------  147 (246)
T ss_pred             CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCC-----------
Confidence            9999999975431    112223456778888877665544    4443 3689999997664433322           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcc
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (307)
                               ..|+.+|...+.+.+.++.+   .+++++.+.||.|.++......              +.     . -..
T Consensus       148 ---------~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~--------------~~-----~-~~~  198 (246)
T PRK05599        148 ---------YVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMK--------------PA-----P-MSV  198 (246)
T ss_pred             ---------cchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCCC--------------CC-----C-CCC
Confidence                     56999999988888877765   4899999999999876432110              00     0 025


Q ss_pred             cHHHHHHHHHHhhcCCCCCceEEec
Q 021819          230 PVKDVAKAQVLLFESPAASGRYLCT  254 (307)
Q Consensus       230 ~~~dva~~~~~~~~~~~~~g~~~~~  254 (307)
                      .++|+|+++++.+.++...+.+...
T Consensus       199 ~pe~~a~~~~~~~~~~~~~~~~~~~  223 (246)
T PRK05599        199 YPRDVAAAVVSAITSSKRSTTLWIP  223 (246)
T ss_pred             CHHHHHHHHHHHHhcCCCCceEEeC
Confidence            8899999999999876543344433

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2.3e-19  Score=150.18  Aligned_cols=189  Identities=13%  Similarity=0.073  Sum_probs=131.6

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      +++++++||||+|+||+++++.|+++|+ +|++++|+......  ... ..  ....+.+|++|.+++.+.+.++|++||
T Consensus        12 l~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~--~~~-~~--~~~~~~~D~~~~~~~~~~~~~iDilVn   85 (245)
T PRK12367         12 WQGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSE--SND-ES--PNEWIKWECGKEESLDKQLASLDVLIL   85 (245)
T ss_pred             hCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhh--hhc-cC--CCeEEEeeCCCHHHHHHhcCCCCEEEE
Confidence            4568999999999999999999999999 89988886522111  111 11  225678999999999998889999999


Q ss_pred             eccCCCC-CCCCChhhhhhhhhHHHHHHHHHHHHhc-------CCcEEEEecCcceeccCCCCCCcccccCCCCchhhhc
Q 021819           87 VASPCTL-EDPVDPEKELILPAVQGTLNVLEAAKRF-------GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK  158 (307)
Q Consensus        87 ~a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~-------~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~  158 (307)
                      |||.... ....+++.+.+++|+.++.++++++...       +.+.++..||.+...+ ..                  
T Consensus        86 nAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~------------------  146 (245)
T PRK12367         86 NHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-AL------------------  146 (245)
T ss_pred             CCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CC------------------
Confidence            9997543 2234567889999999999999987442       1223444455333211 11                  


Q ss_pred             ccCccHHHHHHHHHHHH---HHHH---HhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHH
Q 021819          159 SRKKWYPVSKTLAEKAA---WEFA---EKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK  232 (307)
Q Consensus       159 ~~~~~y~~sK~~~e~~~---~~~~---~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  232 (307)
                        ...|+.||...+.+.   ..++   .+.++.++.+.||.+.++..                         ....++++
T Consensus       147 --~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~-------------------------~~~~~~~~  199 (245)
T PRK12367        147 --SPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELN-------------------------PIGIMSAD  199 (245)
T ss_pred             --CchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccC-------------------------ccCCCCHH
Confidence              146999999875432   2222   13588999999987654421                         01146899


Q ss_pred             HHHHHHHHhhcCCCC
Q 021819          233 DVAKAQVLLFESPAA  247 (307)
Q Consensus       233 dva~~~~~~~~~~~~  247 (307)
                      |+|+.++..+++++.
T Consensus       200 ~vA~~i~~~~~~~~~  214 (245)
T PRK12367        200 FVAKQILDQANLGLY  214 (245)
T ss_pred             HHHHHHHHHHhcCCc
Confidence            999999999976543

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.84  E-value=4.1e-20  Score=146.86  Aligned_cols=253  Identities=15%  Similarity=0.129  Sum_probs=186.3

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCc--ccccC---CCC-CCCceEEEEcccCChhHHHHHhc--C
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS--HLFAL---PGA-GDANLRVFEADVLDSGAVSRAVE--G   80 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~---~~~-~~~~~~~i~~D~~d~~~~~~~~~--~   80 (307)
                      .|..||||.||.-|+.|++.|+++|+ +|.++.|+.+...  ....+   +.. .........+|++|...+.+++.  +
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgY-eVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ik  106 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGY-EVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIK  106 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCc-eeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccC
Confidence            46899999999999999999999999 9999999655432  22221   111 11267788999999999999987  5


Q ss_pred             ccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCC---cEEEEecCcceeccCCCCCCcccccCCCCchhhh
Q 021819           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV---RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC  157 (307)
Q Consensus        81 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~  157 (307)
                      ++-|+|+|+.+..-.+.+-++..-+++..|+++|+++.+..++   -+|-..|| +..|+...  +.|-.|.+|..|-  
T Consensus       107 PtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAst-SElyGkv~--e~PQsE~TPFyPR--  181 (376)
T KOG1372|consen  107 PTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQAST-SELYGKVQ--EIPQSETTPFYPR--  181 (376)
T ss_pred             chhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEeccc-Hhhccccc--CCCcccCCCCCCC--
Confidence            6999999999988777777788889999999999999988763   25656565 77777544  3788888877775  


Q ss_pred             cccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC--CcchHHHHHHHHcCCC--CCCCC--cccCcccH
Q 021819          158 KSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY--LNASCAVLQQLLQGSK--DTQEY--HWLGAVPV  231 (307)
Q Consensus       158 ~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~--~~~~~--~~~~~i~~  231 (307)
                          ++|+.+|..+-+++-.+.+.+++-.+.--..+--.|.....  ...+.+-+.++..+..  +.+++  ..+||.|+
T Consensus       182 ----SPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA  257 (376)
T KOG1372|consen  182 ----SPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHA  257 (376)
T ss_pred             ----ChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchh
Confidence                78999999999888877777776544222222223332221  1222333333333333  22343  78999999


Q ss_pred             HHHHHHHHHhhcCCCCCceEEecCCcccHHHHHHHHHHhC
Q 021819          232 KDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLF  271 (307)
Q Consensus       232 ~dva~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  271 (307)
                      .|-++++|.+++++......+.+++..+++|+++.-...+
T Consensus       258 ~dYVEAMW~mLQ~d~PdDfViATge~hsVrEF~~~aF~~i  297 (376)
T KOG1372|consen  258 GDYVEAMWLMLQQDSPDDFVIATGEQHSVREFCNLAFAEI  297 (376)
T ss_pred             HHHHHHHHHHHhcCCCCceEEecCCcccHHHHHHHHHHhh
Confidence            9999999999998887666678899999999998877666

>PRK06484 short chain dehydrogenase; Validated

Probab=99.84  E-value=2.1e-19  Score=167.12  Aligned_cols=208  Identities=17%  Similarity=0.133  Sum_probs=148.1

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      .++|+++||||+++||+++++.|+++|+ +|++++|+.+....+....  . .++..+++|++|+++++++++       
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSL--G-PDHHALAMDVSDEAQIREGFEQLHREFG   78 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh--C-CceeEEEeccCCHHHHHHHHHHHHHHhC
Confidence            3578999999999999999999999999 8999988765543332211  1 156789999999998887775       


Q ss_pred             CccEEEEeccCCCC------CCCCChhhhhhhhhHHHHHHHHHHHHhc----CC-cEEEEecCcceeccCCCCCCccccc
Q 021819           80 GCKGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAAKRF----GV-RRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 ~~d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~-~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                      ++|++|||||....      +...+++.+.+++|+.++..+++++...    +. +++|++||..+..+.+..       
T Consensus        79 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~-------  151 (520)
T PRK06484         79 RIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKR-------  151 (520)
T ss_pred             CCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCC-------
Confidence            47999999987321      2234456899999999999999888543    33 389999997765544332       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                                   ..|+.+|...+.+.+.++.+   .++++++++||.|.++....................      ..
T Consensus       152 -------------~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~------~~  212 (520)
T PRK06484        152 -------------TAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRI------PL  212 (520)
T ss_pred             -------------chHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcC------CC
Confidence                         57999999999988877765   489999999999977653221000000001111110      11


Q ss_pred             cCcccHHHHHHHHHHhhcC
Q 021819          226 LGAVPVKDVAKAQVLLFES  244 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~  244 (307)
                      ..+..++|+++++.+++..
T Consensus       213 ~~~~~~~~va~~v~~l~~~  231 (520)
T PRK06484        213 GRLGRPEEIAEAVFFLASD  231 (520)
T ss_pred             CCCcCHHHHHHHHHHHhCc
Confidence            2356899999999888764

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.84  E-value=9.8e-20  Score=143.32  Aligned_cols=222  Identities=19%  Similarity=0.172  Sum_probs=157.3

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccC-CCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-PGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      .+++|++++||+.|+||++++++|+++|. .+.++..+.+..+..+.+ .......+.++++|+++..++++.++     
T Consensus         2 ~~tGKna~vtggagGIGl~~sk~Ll~kgi-k~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~   80 (261)
T KOG4169|consen    2 DLTGKNALVTGGAGGIGLATSKALLEKGI-KVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT   80 (261)
T ss_pred             cccCceEEEecCCchhhHHHHHHHHHcCc-hheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH
Confidence            35689999999999999999999999999 444444443333333332 12223378899999999988888876     


Q ss_pred             --CccEEEEeccCCCCCCCCChhhhhhhhhHHHH----HHHHHHHHhc-C--CcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 --GCKGVFHVASPCTLEDPVDPEKELILPAVQGT----LNVLEAAKRF-G--VRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~----~~l~~~~~~~-~--~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                        .+|++||.||+...    .+++..+.+|+.|.    ...+.+..+. |  .+-+|++||..+.++.+..         
T Consensus        81 fg~iDIlINgAGi~~d----kd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~---------  147 (261)
T KOG4169|consen   81 FGTIDILINGAGILDD----KDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVF---------  147 (261)
T ss_pred             hCceEEEEcccccccc----hhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccc---------
Confidence              46999999999763    67899999997654    5555555443 2  3579999998887776665         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC------CcchHHHHHHHHcCCCCCCCCc
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY------LNASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~  224 (307)
                         |.|+.+|++.-+.|+.++....   ..+.|+++..++||.+-+....+.      ...- ..+...++         
T Consensus       148 ---pVY~AsKaGVvgFTRSla~~ay---y~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~-~~~~~~l~---------  211 (261)
T KOG4169|consen  148 ---PVYAASKAGVVGFTRSLADLAY---YQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYS-DSIKEALE---------  211 (261)
T ss_pred             ---hhhhhcccceeeeehhhhhhhh---HhhcCEEEEEECCCcchHHHHHHHHhcCCccccc-HHHHHHHH---------
Confidence               8899999999999999887543   236799999999998754321111      0001 11111111         


Q ss_pred             ccCcccHHHHHHHHHHhhcCCCCCceEEecCCc
Q 021819          225 WLGAVPVKDVAKAQVLLFESPAASGRYLCTNGI  257 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~~~~g~~~~~~~~  257 (307)
                      ...--++.+++..++.++|.+..+..|.+..+.
T Consensus       212 ~~~~q~~~~~a~~~v~aiE~~~NGaiw~v~~g~  244 (261)
T KOG4169|consen  212 RAPKQSPACCAINIVNAIEYPKNGAIWKVDSGS  244 (261)
T ss_pred             HcccCCHHHHHHHHHHHHhhccCCcEEEEecCc
Confidence            122458899999999999997776678776544

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.8e-19  Score=149.45  Aligned_cols=167  Identities=20%  Similarity=0.244  Sum_probs=126.2

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-----CccE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----GCKG   83 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----~~d~   83 (307)
                      ||+++||||+|+||++++++|+++|+ +|++++|++...+.+....     ++.++.+|++|.+++.++++     ++|+
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~-----~~~~~~~D~~d~~~~~~~~~~~~~~~id~   74 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALP-----GVHIEKLDMNDPASLDQLLQRLQGQRFDL   74 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhcc-----ccceEEcCCCCHHHHHHHHHHhhcCCCCE
Confidence            46899999999999999999999999 9999999876554433321     56788899999988887776     5899


Q ss_pred             EEEeccCCCC------CCCCChhhhhhhhhHHHHHHHHHHHHhc---CCcEEEEecCcceeccCCCCCCcccccCCCCch
Q 021819           84 VFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (307)
Q Consensus        84 vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~  154 (307)
                      |||+||....      ....++....+++|+.++.++++++...   +.+.++++||..+..+...              
T Consensus        75 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~--------------  140 (225)
T PRK08177         75 LFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPD--------------  140 (225)
T ss_pred             EEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCC--------------
Confidence            9999987532      1122345778899999999999988543   3367889888543211110              


Q ss_pred             hhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCC
Q 021819          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPL  198 (307)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~  198 (307)
                         ......|+.+|.+.+.+++.++.+   .+++++.++||.+-++.
T Consensus       141 ---~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~  184 (225)
T PRK08177        141 ---GGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDM  184 (225)
T ss_pred             ---CCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence               001146999999999999887765   47999999999998775

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.83  E-value=9.6e-20  Score=154.04  Aligned_cols=207  Identities=17%  Similarity=0.100  Sum_probs=141.1

Q ss_pred             EEEEeCCchhhHHHHHHHHHH----CCCCeEEEEeCCCCCCccccc-CCCC-CCCceEEEEcccCChhHHHHHhcC----
Q 021819           11 TVCVTGANGFIGTWLVKTLLD----NNYTSINATVFPGSDSSHLFA-LPGA-GDANLRVFEADVLDSGAVSRAVEG----   80 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~----~g~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~i~~D~~d~~~~~~~~~~----   80 (307)
                      .++||||+++||.+++++|++    .|+ +|+++.|+.+..+.+.. +... ...++.++.+|++|.++++++++.    
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   80 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGS-VLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALREL   80 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCc-EEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence            689999999999999999997    688 89999997654433221 1110 111678899999999988877642    


Q ss_pred             -------ccEEEEeccCCCCC----C---CCChhhhhhhhhHHHHHHHHHHHHh----c-C-CcEEEEecCcceeccCCC
Q 021819           81 -------CKGVFHVASPCTLE----D---PVDPEKELILPAVQGTLNVLEAAKR----F-G-VRRVVVTSSISAIVPNPG  140 (307)
Q Consensus        81 -------~d~vi~~a~~~~~~----~---~~~~~~~~~~~n~~~~~~l~~~~~~----~-~-~~~~v~iSS~~~~~~~~~  140 (307)
                             .|++|||||.....    .   ..+.+.+.+++|+.++..+.+.+..    . + .+++|++||..+..+.+.
T Consensus        81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~  160 (256)
T TIGR01500        81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKG  160 (256)
T ss_pred             cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCC
Confidence                   26899999964321    1   1234578999999999888877643    2 2 358999999766443333


Q ss_pred             CCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCc--chHHHHHHHHc
Q 021819          141 WKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN--ASCAVLQQLLQ  215 (307)
Q Consensus       141 ~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~--~~~~~~~~~~~  215 (307)
                      .                    ..|+.+|...+.+.+.++.+   .++++++++||.|.++.......  ........+..
T Consensus       161 ~--------------------~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  220 (256)
T TIGR01500       161 W--------------------ALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQE  220 (256)
T ss_pred             c--------------------hHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHH
Confidence            2                    46999999999999888766   48999999999997764221000  00001111111


Q ss_pred             CCCCCCCCcccCcccHHHHHHHHHHhhcC
Q 021819          216 GSKDTQEYHWLGAVPVKDVAKAQVLLFES  244 (307)
Q Consensus       216 ~~~~~~~~~~~~~i~~~dva~~~~~~~~~  244 (307)
                      ..      ....+..++|+|.+++++++.
T Consensus       221 ~~------~~~~~~~p~eva~~~~~l~~~  243 (256)
T TIGR01500       221 LK------AKGKLVDPKVSAQKLLSLLEK  243 (256)
T ss_pred             HH------hcCCCCCHHHHHHHHHHHHhc
Confidence            00      122367999999999999963

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.83  E-value=1e-18  Score=145.80  Aligned_cols=204  Identities=18%  Similarity=0.127  Sum_probs=139.7

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc---CccEEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GCKGVF   85 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~---~~d~vi   85 (307)
                      |+++||||+|+||++++++|+++|. ..|....|+....  ..      ..++.++++|++|.++++++.+   ++|+||
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--~~------~~~~~~~~~Dls~~~~~~~~~~~~~~id~li   72 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--FQ------HDNVQWHALDVTDEAEIKQLSEQFTQLDWLI   72 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--cc------cCceEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence            4899999999999999999999863 1565555543221  10      1168899999999988776544   789999


Q ss_pred             EeccCCCCC----------CCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           86 HVASPCTLE----------DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        86 ~~a~~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                      ||||.....          ...+.+...+.+|+.++..+++.+..    .+.++++++||..+......           
T Consensus        73 ~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~-----------  141 (235)
T PRK09009         73 NCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNR-----------  141 (235)
T ss_pred             ECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCC-----------
Confidence            999986421          11123467889999999888887754    33468999987432111000           


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHh-----cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                       .+.     ...|+.+|...+.+.+.++.+     .+++++.+.||.+.++.....           ....      ...
T Consensus       142 -~~~-----~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~-----------~~~~------~~~  198 (235)
T PRK09009        142 -LGG-----WYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF-----------QQNV------PKG  198 (235)
T ss_pred             -CCC-----cchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch-----------hhcc------ccC
Confidence             011     146999999999888877754     379999999999988764321           0111      123


Q ss_pred             CcccHHHHHHHHHHhhcCCC--CCceEEecC
Q 021819          227 GAVPVKDVAKAQVLLFESPA--ASGRYLCTN  255 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~~--~~g~~~~~~  255 (307)
                      .+++++|+|++++.++..+.  ..|.++..+
T Consensus       199 ~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~  229 (235)
T PRK09009        199 KLFTPEYVAQCLLGIIANATPAQSGSFLAYD  229 (235)
T ss_pred             CCCCHHHHHHHHHHHHHcCChhhCCcEEeeC
Confidence            36799999999999998753  346655443

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.83  E-value=2.7e-20  Score=155.19  Aligned_cols=219  Identities=25%  Similarity=0.322  Sum_probs=148.6

Q ss_pred             EEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC--cccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEecc
Q 021819           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (307)
Q Consensus        12 ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a~   89 (307)
                      |+|+||||.+|+++++.|++.++ +|.++.|+.+..  +.+...      +++++.+|+.|.+++.++++++|.||.+.+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~------g~~vv~~d~~~~~~l~~al~g~d~v~~~~~   73 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQAL------GAEVVEADYDDPESLVAALKGVDAVFSVTP   73 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHT------TTEEEES-TT-HHHHHHHHTTCSEEEEESS
T ss_pred             CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcc------cceEeecccCCHHHHHHHHcCCceEEeecC
Confidence            79999999999999999999998 999999976332  222222      678999999999999999999999999876


Q ss_pred             CCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHH
Q 021819           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (307)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (307)
                      ...            ..-.....+++++|++.|+++||+ ||....+....          ...|.      ...-..|.
T Consensus        74 ~~~------------~~~~~~~~~li~Aa~~agVk~~v~-ss~~~~~~~~~----------~~~p~------~~~~~~k~  124 (233)
T PF05368_consen   74 PSH------------PSELEQQKNLIDAAKAAGVKHFVP-SSFGADYDESS----------GSEPE------IPHFDQKA  124 (233)
T ss_dssp             CSC------------CCHHHHHHHHHHHHHHHT-SEEEE-SEESSGTTTTT----------TSTTH------HHHHHHHH
T ss_pred             cch------------hhhhhhhhhHHHhhhccccceEEE-EEecccccccc----------ccccc------chhhhhhh
Confidence            532            122455788999999999999997 55343221110          01111      22445777


Q ss_pred             HHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCC-CCCC---CCcccCc-ccHHHHHHHHHHhhcC
Q 021819          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS-KDTQ---EYHWLGA-VPVKDVAKAQVLLFES  244 (307)
Q Consensus       170 ~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~-i~~~dva~~~~~~~~~  244 (307)
                      ..|++++    +.+++++++|||..+.......    .. ........ ...+   ++....+ ++.+|+++++..++..
T Consensus       125 ~ie~~l~----~~~i~~t~i~~g~f~e~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~  195 (233)
T PF05368_consen  125 EIEEYLR----ESGIPYTIIRPGFFMENLLPPF----AP-VVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLD  195 (233)
T ss_dssp             HHHHHHH----HCTSEBEEEEE-EEHHHHHTTT----HH-TTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHS
T ss_pred             hhhhhhh----hccccceeccccchhhhhhhhh----cc-cccccccceEEEEccCCCccccccccHHHHHHHHHHHHcC
Confidence            8887776    5699999999997654321111    00 00000011 0111   1233455 4999999999999998


Q ss_pred             CCCC--ce-EEecCCcccHHHHHHHHHHhCCCCCC
Q 021819          245 PAAS--GR-YLCTNGIYQFGDFAERVSKLFPEFPV  276 (307)
Q Consensus       245 ~~~~--g~-~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (307)
                      +...  +. +.+.++.+|+.|+++.+.+.+ |.++
T Consensus       196 p~~~~~~~~~~~~~~~~t~~eia~~~s~~~-G~~v  229 (233)
T PF05368_consen  196 PEKHNNGKTIFLAGETLTYNEIAAILSKVL-GKKV  229 (233)
T ss_dssp             GGGTTEEEEEEEGGGEEEHHHHHHHHHHHH-TSEE
T ss_pred             hHHhcCCEEEEeCCCCCCHHHHHHHHHHHH-CCcc
Confidence            7654  44 556778899999999999998 6554

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.82  E-value=1.3e-18  Score=151.34  Aligned_cols=237  Identities=14%  Similarity=0.087  Sum_probs=147.3

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCC-CCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------C
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~   80 (307)
                      +++++||||+++||+++++.|+++| + +|++..|+....+.+.........++..+.+|++|.++++++++       +
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            5689999999999999999999999 8 89999887654332221111111267888999999988877664       4


Q ss_pred             ccEEEEeccCCCCC-----CCCChhhhhhhhhHHHHHHHHHHHH----hcC--CcEEEEecCcceeccCCCC-CCccccc
Q 021819           81 CKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAK----RFG--VRRVVVTSSISAIVPNPGW-KGKVFDE  148 (307)
Q Consensus        81 ~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~--~~~~v~iSS~~~~~~~~~~-~~~~~~E  148 (307)
                      +|++|||||.....     ...+.+...+++|+.++..+++++.    +.+  .++||++||..+....... ...+.+.
T Consensus        82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  161 (314)
T TIGR01289        82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANL  161 (314)
T ss_pred             CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccc
Confidence            89999999975321     1234567889999999888877663    332  3699999997654221000 0000000


Q ss_pred             CC-------CCch-----hhhcccCccHHHHHHHHHHHHHHHHHh----cCCcEEEEecCcee-CCCCCCCCcchHHHHH
Q 021819          149 TS-------WTDL-----EYCKSRKKWYPVSKTLAEKAAWEFAEK----HGVDVVAIHPATCL-GPLMQPYLNASCAVLQ  211 (307)
Q Consensus       149 ~~-------~~~~-----~~~~~~~~~y~~sK~~~e~~~~~~~~~----~~i~~~ivrp~~v~-g~~~~~~~~~~~~~~~  211 (307)
                      ++       +..+     .........|+.||.+...+.+.++++    .++.+++++||.|. ++..............
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~  241 (314)
T TIGR01289       162 GDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLFP  241 (314)
T ss_pred             cccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHHH
Confidence            00       0000     000011246999999988777777654    37999999999985 5543322111111111


Q ss_pred             HHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCCC--CCceEEe
Q 021819          212 QLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLC  253 (307)
Q Consensus       212 ~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~--~~g~~~~  253 (307)
                      .....       ....+.++++.|+.++.++..+.  ..|.|..
T Consensus       242 ~~~~~-------~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~  278 (314)
T TIGR01289       242 PFQKY-------ITKGYVSEEEAGERLAQVVSDPKLKKSGVYWS  278 (314)
T ss_pred             HHHHH-------HhccccchhhhhhhhHHhhcCcccCCCceeee
Confidence            10000       01124689999999998887543  3466653

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.82  E-value=7e-19  Score=160.59  Aligned_cols=212  Identities=20%  Similarity=0.151  Sum_probs=146.3

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------C
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~   80 (307)
                      ++++++||||+|+||+++++.|.++|+ +|++++|+.... .+..+....  +...+.+|++|+++++++++       .
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~-~l~~~~~~~--~~~~~~~Dv~~~~~~~~~~~~~~~~~g~  284 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGE-ALAAVANRV--GGTALALDITAPDAPARIAEHLAERHGG  284 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHH-HHHHHHHHc--CCeEEEEeCCCHHHHHHHHHHHHHhCCC
Confidence            468999999999999999999999999 888888743221 111111000  34678899999998887765       5


Q ss_pred             ccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhcC----CcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRFG----VRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        81 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      +|+||||||.....    ...+.+...+++|+.++.++.+++....    .++||++||..++.+.++.           
T Consensus       285 id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~-----------  353 (450)
T PRK08261        285 LDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQ-----------  353 (450)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCC-----------
Confidence            79999999976432    2234567889999999999999997642    2689999998776554442           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcc
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (307)
                               ..|+.+|...+.+.+.++.+   .+++++++.||.+.++......    ..........     .......
T Consensus       354 ---------~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~----~~~~~~~~~~-----~~l~~~~  415 (450)
T PRK08261        354 ---------TNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIP----FATREAGRRM-----NSLQQGG  415 (450)
T ss_pred             ---------hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccc----hhHHHHHhhc-----CCcCCCC
Confidence                     56999999877777766544   4899999999998765432211    1111111110     0122335


Q ss_pred             cHHHHHHHHHHhhcCC--CCCceEE
Q 021819          230 PVKDVAKAQVLLFESP--AASGRYL  252 (307)
Q Consensus       230 ~~~dva~~~~~~~~~~--~~~g~~~  252 (307)
                      .++|+|+++.+++...  ...|..+
T Consensus       416 ~p~dva~~~~~l~s~~~~~itG~~i  440 (450)
T PRK08261        416 LPVDVAETIAWLASPASGGVTGNVV  440 (450)
T ss_pred             CHHHHHHHHHHHhChhhcCCCCCEE
Confidence            6789999999888643  2346543

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.82  E-value=1.6e-18  Score=146.21  Aligned_cols=231  Identities=18%  Similarity=0.143  Sum_probs=155.4

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccC-CC--CCCCceEEEEcccCChhHHHHHhc-
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-PG--AGDANLRVFEADVLDSGAVSRAVE-   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-~~--~~~~~~~~i~~D~~d~~~~~~~~~-   79 (307)
                      +..+.+|+++||||+.+||+++|++|.+.|. +|+..+|+.+..+..... ..  ....++..+.+|+++.++.+++++ 
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~   81 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEF   81 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHH
Confidence            4467899999999999999999999999999 899999977654333221 11  111268899999998877776654 


Q ss_pred             -------CccEEEEeccCCCC-----CCCCChhhhhhhhhHHH-HHHHHHHHHh----cCCcEEEEecCcceeccCCCCC
Q 021819           80 -------GCKGVFHVASPCTL-----EDPVDPEKELILPAVQG-TLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWK  142 (307)
Q Consensus        80 -------~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~-~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~  142 (307)
                             ++|++|||||....     +.+.+.+...+++|+.| ...+.+++..    .+.+.++++||..+....... 
T Consensus        82 ~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~-  160 (270)
T KOG0725|consen   82 AVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGS-  160 (270)
T ss_pred             HHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCC-
Confidence                   58999999997663     33455678999999995 6666666633    345689999987654433221 


Q ss_pred             CcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCC-C-cchHHHHHHHHcCC
Q 021819          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY-L-NASCAVLQQLLQGS  217 (307)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~-~-~~~~~~~~~~~~~~  217 (307)
                                 +       ..|+.+|.+.+.+.+.++.+   +|++++++-||.|.++..... . .....+........
T Consensus       161 -----------~-------~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~  222 (270)
T KOG0725|consen  161 -----------G-------VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKG  222 (270)
T ss_pred             -----------c-------ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhcccc
Confidence                       0       25888888887777766544   599999999999999872111 1 11111211100011


Q ss_pred             CCCCCCcccCcccHHHHHHHHHHhhcCCC--CCceEEecCCcc
Q 021819          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIY  258 (307)
Q Consensus       218 ~~~~~~~~~~~i~~~dva~~~~~~~~~~~--~~g~~~~~~~~~  258 (307)
                      ..    ..-.+..++|++..+.+++....  ..|.-++.+++.
T Consensus       223 ~~----p~gr~g~~~eva~~~~fla~~~asyitG~~i~vdgG~  261 (270)
T KOG0725|consen  223 AV----PLGRVGTPEEVAEAAAFLASDDASYITGQTIIVDGGF  261 (270)
T ss_pred             cc----ccCCccCHHHHHHhHHhhcCcccccccCCEEEEeCCE
Confidence            10    13346789999999888887643  335555555543

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.82  E-value=1.9e-18  Score=153.11  Aligned_cols=190  Identities=17%  Similarity=0.067  Sum_probs=132.5

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      .++|+++||||+|+||++++++|.++|+ +|++++|++++......  .... ++..+.+|++|++++.+.+.++|++||
T Consensus       176 l~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~--~~~~-~v~~v~~Dvsd~~~v~~~l~~IDiLIn  251 (406)
T PRK07424        176 LKGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEIN--GEDL-PVKTLHWQVGQEAALAELLEKVDILII  251 (406)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHh--hcCC-CeEEEEeeCCCHHHHHHHhCCCCEEEE
Confidence            4578999999999999999999999999 89988886543321111  1111 467888999999999999999999999


Q ss_pred             eccCCCC-CCCCChhhhhhhhhHHHHHHHHHHHHh----cC---C-cEEEEecCcceeccCCCCCCcccccCCCCchhhh
Q 021819           87 VASPCTL-EDPVDPEKELILPAVQGTLNVLEAAKR----FG---V-RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC  157 (307)
Q Consensus        87 ~a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~---~-~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~  157 (307)
                      |||.... +...++..+.+++|+.++.++++++.+    .+   . ..+|++|+ +...+ +.                 
T Consensus       252 nAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~~~-~~-----------------  312 (406)
T PRK07424        252 NHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEVNP-AF-----------------  312 (406)
T ss_pred             CCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-ccccC-CC-----------------
Confidence            9997543 222335578999999999999998743    22   1 23555554 32111 11                 


Q ss_pred             cccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHH
Q 021819          158 KSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKA  237 (307)
Q Consensus       158 ~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~  237 (307)
                         ...|+.||.+.+.+......+.++.+..+.|+.+.++..                         ....++++|+|+.
T Consensus       313 ---~~~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~gp~~t~~~-------------------------~~~~~spe~vA~~  364 (406)
T PRK07424        313 ---SPLYELSKRALGDLVTLRRLDAPCVVRKLILGPFKSNLN-------------------------PIGVMSADWVAKQ  364 (406)
T ss_pred             ---chHHHHHHHHHHHHHHHHHhCCCCceEEEEeCCCcCCCC-------------------------cCCCCCHHHHHHH
Confidence               135999999998876433334566666666665432210                         1124799999999


Q ss_pred             HHHhhcCCCC
Q 021819          238 QVLLFESPAA  247 (307)
Q Consensus       238 ~~~~~~~~~~  247 (307)
                      ++..+++++.
T Consensus       365 il~~i~~~~~  374 (406)
T PRK07424        365 ILKLAKRDFR  374 (406)
T ss_pred             HHHHHHCCCC
Confidence            9999987653

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.82  E-value=3.5e-18  Score=146.64  Aligned_cols=225  Identities=12%  Similarity=0.047  Sum_probs=146.1

Q ss_pred             ccCCcEEEEeCC--chhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc------------CCCC-CCCceEEEEccc--
Q 021819            6 EKEEETVCVTGA--NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA------------LPGA-GDANLRVFEADV--   68 (307)
Q Consensus         6 ~~~~~~ilItGa--tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~------------~~~~-~~~~~~~i~~D~--   68 (307)
                      .+++|+++||||  +.+||+++++.|.+.|+ +|++ .|+.+..+.+..            .... .......+++|+  
T Consensus         6 ~l~gk~alITGa~~s~GIG~a~A~~la~~Ga-~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          6 DLRGKRAFIAGVADDNGYGWAIAKALAAAGA-EILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             CCCCCEEEEeCCCCCCcHHHHHHHHHHHCCC-EEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            367899999999  89999999999999999 7877 444332221110            0000 000245778898  


Q ss_pred             CChh------------------HHHHHhc-------CccEEEEeccCCCC------CCCCChhhhhhhhhHHHHHHHHHH
Q 021819           69 LDSG------------------AVSRAVE-------GCKGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEA  117 (307)
Q Consensus        69 ~d~~------------------~~~~~~~-------~~d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~  117 (307)
                      ++++                  +++++++       .+|++|||||....      ....+++.+.+++|+.++..+.++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~  163 (303)
T PLN02730         84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH  163 (303)
T ss_pred             CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence            3333                  5555554       47999999974321      233456789999999999999888


Q ss_pred             HHhc--CCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh----cCCcEEEEec
Q 021819          118 AKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK----HGVDVVAIHP  191 (307)
Q Consensus       118 ~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~~i~~~ivrp  191 (307)
                      +...  ..+++|++||..+..+.+..                   ...|+.+|...+.+.+.++.+    .|+++++|.|
T Consensus       164 ~~p~m~~~G~II~isS~a~~~~~p~~-------------------~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~P  224 (303)
T PLN02730        164 FGPIMNPGGASISLTYIASERIIPGY-------------------GGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISA  224 (303)
T ss_pred             HHHHHhcCCEEEEEechhhcCCCCCC-------------------chhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEee
Confidence            7543  12689999997664433221                   035999999999988887765    3799999999


Q ss_pred             CceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCcc
Q 021819          192 ATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIY  258 (307)
Q Consensus       192 ~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~  258 (307)
                      |.|.++..... ..............+      ...+..++|++.++++++...  ...|..+..++++
T Consensus       225 G~v~T~~~~~~-~~~~~~~~~~~~~~p------l~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~  286 (303)
T PLN02730        225 GPLGSRAAKAI-GFIDDMIEYSYANAP------LQKELTADEVGNAAAFLASPLASAITGATIYVDNGL  286 (303)
T ss_pred             CCccCchhhcc-cccHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCc
Confidence            99988764321 111111111111111      123568999999999988643  3346555444443

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.80  E-value=2.2e-18  Score=137.14  Aligned_cols=164  Identities=22%  Similarity=0.282  Sum_probs=124.6

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccc----ccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL----FALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~----~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ++++||||+|+||.+++++|+++|...|+.+.|+.......    ..+..... ++.++.+|+++++++.++++      
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGA-EVTVVACDVADRAALAAALAAIPARL   79 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            47999999999999999999999974688888865443221    11111122 67789999999988877765      


Q ss_pred             -CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCch
Q 021819           80 -GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (307)
Q Consensus        80 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~  154 (307)
                       .+|.|||+++....    ....+.+...+++|+.++.++++++.+.+.+++|++||..+.++....             
T Consensus        80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~~~-------------  146 (180)
T smart00822       80 GPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNPGQ-------------  146 (180)
T ss_pred             CCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCCCc-------------
Confidence             36999999996542    112244578899999999999999988877899999997766554332             


Q ss_pred             hhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCcee
Q 021819          155 EYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCL  195 (307)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~  195 (307)
                             ..|+.+|...+.+++.+ +..+++++++.||.+-
T Consensus       147 -------~~y~~sk~~~~~~~~~~-~~~~~~~~~~~~g~~~  179 (180)
T smart00822      147 -------ANYAAANAFLDALAAHR-RARGLPATSINWGAWA  179 (180)
T ss_pred             -------hhhHHHHHHHHHHHHHH-HhcCCceEEEeecccc
Confidence                   56999999999988554 4568999999998764

It uses NADPH to reduce the keto group to a hydroxy group.

>PLN00015 protochlorophyllide reductase

Probab=99.80  E-value=4e-18  Score=147.95  Aligned_cols=231  Identities=16%  Similarity=0.126  Sum_probs=142.1

Q ss_pred             EEeCCchhhHHHHHHHHHHCC-CCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------CccEE
Q 021819           13 CVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GCKGV   84 (307)
Q Consensus        13 lItGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~~d~v   84 (307)
                      +||||+++||.+++++|+++| + +|++..|+.+....+.........++.++++|++|.++++++++       .+|++
T Consensus         1 lITGas~GIG~aia~~l~~~G~~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l   79 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKW-HVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVL   79 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEE
Confidence            599999999999999999999 8 89988887654332222111111267888999999998877764       47999


Q ss_pred             EEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHHH----hcC--CcEEEEecCcceeccCCCCC-Cc--------
Q 021819           85 FHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAK----RFG--VRRVVVTSSISAIVPNPGWK-GK--------  144 (307)
Q Consensus        85 i~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~--~~~~v~iSS~~~~~~~~~~~-~~--------  144 (307)
                      |||||....     ....+.++..+++|+.|+.++++.+.    +.+  .++||++||..+........ ..        
T Consensus        80 InnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~  159 (308)
T PLN00015         80 VCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLR  159 (308)
T ss_pred             EECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhh
Confidence            999997532     11234567899999999888877653    333  46999999976532110000 00        


Q ss_pred             ----ccccCCCC----chhhhcccCccHHHHHHHHHHHHHHHHHh----cCCcEEEEecCcee-CCCCCCCCcchHHHHH
Q 021819          145 ----VFDETSWT----DLEYCKSRKKWYPVSKTLAEKAAWEFAEK----HGVDVVAIHPATCL-GPLMQPYLNASCAVLQ  211 (307)
Q Consensus       145 ----~~~E~~~~----~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~~i~~~ivrp~~v~-g~~~~~~~~~~~~~~~  211 (307)
                          ...+....    ...+  .....|+.||.+...+.+.++++    .|+.+++++||.|. ++......... ....
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~--~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~-~~~~  236 (308)
T PLN00015        160 GLAGGLNGLNSSAMIDGGEF--DGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLF-RLLF  236 (308)
T ss_pred             hhhcccCCccchhhccccCC--cHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHH-HHHH
Confidence                00000000    0000  11146999999966666666654    47999999999995 44432211110 0000


Q ss_pred             HHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCCC--CCceEEe
Q 021819          212 QLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLC  253 (307)
Q Consensus       212 ~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~--~~g~~~~  253 (307)
                      ......      ....+.++++.|+.+++++....  ..|.|..
T Consensus       237 ~~~~~~------~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~  274 (308)
T PLN00015        237 PPFQKY------ITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWS  274 (308)
T ss_pred             HHHHHH------HhcccccHHHhhhhhhhhccccccCCCccccc
Confidence            000000      01124689999999998886533  3466643

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.78  E-value=6.3e-18  Score=140.10  Aligned_cols=197  Identities=10%  Similarity=0.084  Sum_probs=134.1

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      .++|+++||||+++||+++++.|.++|+ +|++..|+.+..+.+.. +..... ++..+.+|++|+++++++++      
T Consensus         3 ~~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (227)
T PRK08862          3 IKSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTD-NVYSFQLKDFSQESIRHLFDAIEQQF   80 (227)
T ss_pred             CCCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCC-CeEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4578999999999999999999999999 89999987655433321 111112 57788899999998877653      


Q ss_pred             --CccEEEEeccCCCCC-----CCCChhhhhhhhhHHHHHHHHHHH----HhcC-CcEEEEecCcceeccCCCCCCcccc
Q 021819           80 --GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAA----KRFG-VRRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                        .+|++|||||.....     ...+++.+.+.+|+.+...+.+.+    .+.+ .+.+|++||....   +..      
T Consensus        81 g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~~~------  151 (227)
T PRK08862         81 NRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---QDL------  151 (227)
T ss_pred             CCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---CCc------
Confidence              589999999753321     122344567778888777666554    3333 4689999985431   111      


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCc
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (307)
                                    ..|+.+|...+.+.+.++.+   ++++++.|.||.+.++....     ...+..            
T Consensus       152 --------------~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~~-----~~~~~~------------  200 (227)
T PRK08862        152 --------------TGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGELD-----AVHWAE------------  200 (227)
T ss_pred             --------------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCccC-----HHHHHH------------
Confidence                          45888888888777766654   58999999999998873211     111111            


Q ss_pred             ccCcccHHHHHHHHHHhhcCCCCCce
Q 021819          225 WLGAVPVKDVAKAQVLLFESPAASGR  250 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~~~~g~  250 (307)
                          + .+|++.+..+++.++...|+
T Consensus       201 ----~-~~~~~~~~~~l~~~~~~tg~  221 (227)
T PRK08862        201 ----I-QDELIRNTEYIVANEYFSGR  221 (227)
T ss_pred             ----H-HHHHHhheeEEEecccccce
Confidence                1 17888888887765544443

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.77  E-value=4.9e-17  Score=123.96  Aligned_cols=202  Identities=18%  Similarity=0.214  Sum_probs=149.5

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEecc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a~   89 (307)
                      |||.|+||||-+|+.|++..+++|+ +|++++|++++....+        ++..++.|+.|.+++.+.+.+.|+||..-+
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~--------~~~i~q~Difd~~~~a~~l~g~DaVIsA~~   71 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQ--------GVTILQKDIFDLTSLASDLAGHDAVISAFG   71 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccc--------cceeecccccChhhhHhhhcCCceEEEecc
Confidence            4899999999999999999999999 9999999987764432        678899999999999999999999999866


Q ss_pred             CCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHH
Q 021819           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (307)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (307)
                      ....    +..    .........+++..+..++.|++.++..+..+-.++.  ..++-.+++.        ..|..++.
T Consensus        72 ~~~~----~~~----~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~--rLvD~p~fP~--------ey~~~A~~  133 (211)
T COG2910          72 AGAS----DND----ELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGT--RLVDTPDFPA--------EYKPEALA  133 (211)
T ss_pred             CCCC----Chh----HHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCc--eeecCCCCch--------hHHHHHHH
Confidence            5422    111    1223347788888888899999999988777665552  2232222222        35888888


Q ss_pred             HHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCC-CCCCCcccCcccHHHHHHHHHHhhcCCCCC
Q 021819          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK-DTQEYHWLGAVPVKDVAKAQVLLFESPAAS  248 (307)
Q Consensus       170 ~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~dva~~~~~~~~~~~~~  248 (307)
                      .+|. +..+..+.+++|+.+.|+..+-|+.+....         ..++- +.....--++|+..|.|-+++-.++++...
T Consensus       134 ~ae~-L~~Lr~~~~l~WTfvSPaa~f~PGerTg~y---------rlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~h~  203 (211)
T COG2910         134 QAEF-LDSLRAEKSLDWTFVSPAAFFEPGERTGNY---------RLGGDQLLVNAKGESRISYADYAIAVLDELEKPQHI  203 (211)
T ss_pred             HHHH-HHHHhhccCcceEEeCcHHhcCCccccCce---------EeccceEEEcCCCceeeeHHHHHHHHHHHHhccccc
Confidence            8884 444444567999999999999987655411         11222 222334568899999999999999987654

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.77  E-value=1.8e-18  Score=136.53  Aligned_cols=151  Identities=21%  Similarity=0.234  Sum_probs=118.1

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCC--CCCCccc-ccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP--GSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~--~~~~~~~-~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      |+++||||++.||++++++|+++|...|+.+.|+  .+..+.+ ..+.... .++.++++|++++++++++++       
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPG-AKITFIECDLSDPESIRALIEEVIKRFG   79 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTT-SEEEEEESETTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccc-cccccccccccccccccccccccccccc
Confidence            6899999999999999999999976588888887  2222222 2222112 288999999999998888775       


Q ss_pred             CccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchh
Q 021819           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~  155 (307)
                      .+|++|||+|......    ..+.+.+.+.+|+.+...+.+++..++.+++|++||..+..+.+..              
T Consensus        80 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~--------------  145 (167)
T PF00106_consen   80 PLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGSPGM--------------  145 (167)
T ss_dssp             SESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSSTTB--------------
T ss_pred             cccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccCCCCC--------------
Confidence            5799999999876321    1234579999999999999999988667899999998876655543              


Q ss_pred             hhcccCccHHHHHHHHHHHHHHHHHh
Q 021819          156 YCKSRKKWYPVSKTLAEKAAWEFAEK  181 (307)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~  181 (307)
                            ..|+.+|...+.+.+.++++
T Consensus       146 ------~~Y~askaal~~~~~~la~e  165 (167)
T PF00106_consen  146 ------SAYSASKAALRGLTQSLAAE  165 (167)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHH
T ss_pred             ------hhHHHHHHHHHHHHHHHHHh
Confidence                  56999999999999888765

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.77  E-value=1.8e-16  Score=135.28  Aligned_cols=221  Identities=21%  Similarity=0.245  Sum_probs=162.9

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEecc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a~   89 (307)
                      ++|+||||||++|++++++|+++|+ +|.+..|++....... .      ++.+..+|+.+.+++...+++.|.++++.+
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~-~v~~~~r~~~~~~~~~-~------~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~   72 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGH-EVRAAVRNPEAAAALA-G------GVEVVLGDLRDPKSLVAGAKGVDGVLLISG   72 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCC-EEEEEEeCHHHHHhhc-C------CcEEEEeccCCHhHHHHHhccccEEEEEec
Confidence            4799999999999999999999999 9999999887766554 1      789999999999999999999999999987


Q ss_pred             CCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHH
Q 021819           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (307)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (307)
                      ... ...     ...........+..+++. .+.++++++|...+..   ..            +       ..|..+|.
T Consensus        73 ~~~-~~~-----~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~~~~~---~~------------~-------~~~~~~~~  123 (275)
T COG0702          73 LLD-GSD-----AFRAVQVTAVVRAAEAAG-AGVKHGVSLSVLGADA---AS------------P-------SALARAKA  123 (275)
T ss_pred             ccc-ccc-----chhHHHHHHHHHHHHHhc-CCceEEEEeccCCCCC---CC------------c-------cHHHHHHH
Confidence            643 111     122333444455555554 4467899988744311   10            1       46999999


Q ss_pred             HHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCC-CCCCCcccCcccHHHHHHHHHHhhcCCCCC
Q 021819          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK-DTQEYHWLGAVPVKDVAKAQVLLFESPAAS  248 (307)
Q Consensus       170 ~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~dva~~~~~~~~~~~~~  248 (307)
                      ..|..+.    ..|++++++||..+|.......      .......+.+ ...+....+++..+|++.++...+..+...
T Consensus       124 ~~e~~l~----~sg~~~t~lr~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~~~  193 (275)
T COG0702         124 AVEAALR----SSGIPYTTLRRAAFYLGAGAAF------IEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPATA  193 (275)
T ss_pred             HHHHHHH----hcCCCeEEEecCeeeeccchhH------HHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCccc
Confidence            9999997    6799999999777766542211      1122222222 223445788999999999999999887655


Q ss_pred             c-eEEecC-CcccHHHHHHHHHHhCCCCCCCc
Q 021819          249 G-RYLCTN-GIYQFGDFAERVSKLFPEFPVHR  278 (307)
Q Consensus       249 g-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  278 (307)
                      + .|.+.+ +..+..+..+.+.+.. +.+...
T Consensus       194 ~~~~~l~g~~~~~~~~~~~~l~~~~-gr~~~~  224 (275)
T COG0702         194 GRTYELAGPEALTLAELASGLDYTI-GRPVGL  224 (275)
T ss_pred             CcEEEccCCceecHHHHHHHHHHHh-CCccee
Confidence            4 577665 5799999999999999 666555

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.77  E-value=7.7e-18  Score=130.55  Aligned_cols=169  Identities=18%  Similarity=0.162  Sum_probs=123.0

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      .++.+||||||+.+||..|++++++.|. +|+...|+....+..+...+    .+....+|+.|.++.++++.       
T Consensus         3 ~tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p----~~~t~v~Dv~d~~~~~~lvewLkk~~P   77 (245)
T COG3967           3 TTGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENP----EIHTEVCDVADRDSRRELVEWLKKEYP   77 (245)
T ss_pred             ccCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCc----chheeeecccchhhHHHHHHHHHhhCC
Confidence            4577999999999999999999999999 89999998776655544322    67788899999988777664       


Q ss_pred             CccEEEEeccCCCCC------CCCChhhhhhhhhHHHHHHHHHHHHhc----CCcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 GCKGVFHVASPCTLE------DPVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                      +.+++|||||+....      ...++..+.+.+|+.++.+|..+...+    .-..+|.+||.-++-+....        
T Consensus        78 ~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~--------  149 (245)
T COG3967          78 NLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMAST--------  149 (245)
T ss_pred             chheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCccccc--------
Confidence            569999999987642      223334678889999999988887443    34579999996665554442        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCC
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGP  197 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~  197 (307)
                          |.|+..|.+....|+.+.|++     +..+++|+=+-|+.|-++
T Consensus       150 ----PvYcaTKAaiHsyt~aLR~Ql-----k~t~veVIE~~PP~V~t~  188 (245)
T COG3967         150 ----PVYCATKAAIHSYTLALREQL-----KDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             ----ccchhhHHHHHHHHHHHHHHh-----hhcceEEEEecCCceecC
Confidence                444444433344444333332     245899999999999886

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.76  E-value=8.6e-17  Score=138.00  Aligned_cols=227  Identities=11%  Similarity=0.045  Sum_probs=138.7

Q ss_pred             ccCCcEEEEeCCc--hhhHHHHHHHHHHCCCCeEEEEeCCC---------CCCcccccCC-CCC--------------CC
Q 021819            6 EKEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPG---------SDSSHLFALP-GAG--------------DA   59 (307)
Q Consensus         6 ~~~~~~ilItGat--G~iG~~l~~~L~~~g~~~V~~~~r~~---------~~~~~~~~~~-~~~--------------~~   59 (307)
                      .+++|+++||||+  .+||+++++.|.++|+ +|+..++.+         ...+...... ..+              ..
T Consensus         5 ~~~gk~alITGa~~~~GIG~a~A~~la~~Ga-~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~   83 (299)
T PRK06300          5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAGA-TILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFD   83 (299)
T ss_pred             CCCCCEEEEeCCCCCCCHHHHHHHHHHHCCC-EEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcC
Confidence            5678999999995  9999999999999999 777765421         0000000000 000              00


Q ss_pred             ceEEEEcccCC--------hhHHHHHhc-------CccEEEEeccCCC--C----CCCCChhhhhhhhhHHHHHHHHHHH
Q 021819           60 NLRVFEADVLD--------SGAVSRAVE-------GCKGVFHVASPCT--L----EDPVDPEKELILPAVQGTLNVLEAA  118 (307)
Q Consensus        60 ~~~~i~~D~~d--------~~~~~~~~~-------~~d~vi~~a~~~~--~----~~~~~~~~~~~~~n~~~~~~l~~~~  118 (307)
                      ...-+..|+.+        .++++++++       ++|++|||||...  .    +...+++.+.+++|+.++.++.+++
T Consensus        84 ~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~  163 (299)
T PRK06300         84 TPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHF  163 (299)
T ss_pred             CCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            11122222222        123444443       5899999998532  1    2234567899999999999999988


Q ss_pred             Hhc--CCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh----cCCcEEEEecC
Q 021819          119 KRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK----HGVDVVAIHPA  192 (307)
Q Consensus       119 ~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~~i~~~ivrp~  192 (307)
                      ...  ..+++|++||+.+..+.+..                   ...|+.+|...+.+.+.++.+    +|+++++|.||
T Consensus       164 ~p~m~~~G~ii~iss~~~~~~~p~~-------------------~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG  224 (299)
T PRK06300        164 GPIMNPGGSTISLTYLASMRAVPGY-------------------GGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAG  224 (299)
T ss_pred             HHHhhcCCeEEEEeehhhcCcCCCc-------------------cHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeC
Confidence            653  22579999987664433321                   025899999998888877754    38999999999


Q ss_pred             ceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCccc
Q 021819          193 TCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIYQ  259 (307)
Q Consensus       193 ~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~~  259 (307)
                      .+.++...... .............+      ...+..++|++.++.+++...  ...|..+..++++.
T Consensus       225 ~v~T~~~~~~~-~~~~~~~~~~~~~p------~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~  286 (299)
T PRK06300        225 PLASRAGKAIG-FIERMVDYYQDWAP------LPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGAN  286 (299)
T ss_pred             CccChhhhccc-ccHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            99887532210 01111111111111      223568999999999988653  34465554455443

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.75  E-value=2.2e-18  Score=144.35  Aligned_cols=214  Identities=19%  Similarity=0.198  Sum_probs=148.7

Q ss_pred             CCc--hhhHHHHHHHHHHCCCCeEEEEeCCCCCC-cccccCCCCCCCceEEEEcccCChhHHHHHhc--------CccEE
Q 021819           16 GAN--GFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVE--------GCKGV   84 (307)
Q Consensus        16 Gat--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--------~~d~v   84 (307)
                      |++  ++||+++++.|+++|+ +|++.+|+.++. ..+..+....  +..++++|++|+++++++++        .+|++
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga-~V~~~~~~~~~~~~~~~~l~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~l   77 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGA-NVILTDRNEEKLADALEELAKEY--GAEVIQCDLSDEESVEALFDEAVERFGGRIDIL   77 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTE-EEEEEESSHHHHHHHHHHHHHHT--TSEEEESCTTSHHHHHHHHHHHHHHHCSSESEE
T ss_pred             CCCCCCChHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHHHc--CCceEeecCcchHHHHHHHHHHHhhcCCCeEEE
Confidence            666  9999999999999999 999999987652 1222221111  33469999999988887754        57999


Q ss_pred             EEeccCCCC----CC----CCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcccccCCCCch
Q 021819           85 FHVASPCTL----ED----PVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (307)
Q Consensus        85 i~~a~~~~~----~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~  154 (307)
                      ||+++....    ..    ..+.+...+++|+.+...+++++.+.  ..+++|++||..+....+..             
T Consensus        78 V~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~-------------  144 (241)
T PF13561_consen   78 VNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGY-------------  144 (241)
T ss_dssp             EEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTT-------------
T ss_pred             EecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccc-------------
Confidence            999987653    11    12356889999999999999988543  12689999987654443332             


Q ss_pred             hhhcccCccHHHHHHHHHHHHHHHHHh----cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCccc
Q 021819          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (307)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~----~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  230 (307)
                             ..|+.+|...+.+.+.++.+    .||++++|.||.+.++..... .....+........|      ...+..
T Consensus       145 -------~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~-~~~~~~~~~~~~~~p------l~r~~~  210 (241)
T PF13561_consen  145 -------SAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERI-PGNEEFLEELKKRIP------LGRLGT  210 (241)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHH-HTHHHHHHHHHHHST------TSSHBE
T ss_pred             -------hhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhcc-ccccchhhhhhhhhc------cCCCcC
Confidence                   46888888888777766533    589999999999987642211 112233333333332      234579


Q ss_pred             HHHHHHHHHHhhcCC--CCCceEEecCCccc
Q 021819          231 VKDVAKAQVLLFESP--AASGRYLCTNGIYQ  259 (307)
Q Consensus       231 ~~dva~~~~~~~~~~--~~~g~~~~~~~~~~  259 (307)
                      ++|+|.++.+++...  ...|..+..|++++
T Consensus       211 ~~evA~~v~fL~s~~a~~itG~~i~vDGG~s  241 (241)
T PF13561_consen  211 PEEVANAVLFLASDAASYITGQVIPVDGGFS  241 (241)
T ss_dssp             HHHHHHHHHHHHSGGGTTGTSEEEEESTTGG
T ss_pred             HHHHHHHHHHHhCccccCccCCeEEECCCcC
Confidence            999999999998754  45688777777654

...

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.75  E-value=2.9e-16  Score=130.22  Aligned_cols=169  Identities=25%  Similarity=0.277  Sum_probs=129.8

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      ...|-|+|||.-.+.|+.||++|.++|+ .|++....++..+.+.....  .++.+.++.|++++++++++.+       
T Consensus        27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf-~V~Agcl~~~gae~L~~~~~--s~rl~t~~LDVT~~esi~~a~~~V~~~l~  103 (322)
T KOG1610|consen   27 LSDKAVLITGCDSGFGRLLAKKLDKKGF-RVFAGCLTEEGAESLRGETK--SPRLRTLQLDVTKPESVKEAAQWVKKHLG  103 (322)
T ss_pred             cCCcEEEEecCCcHHHHHHHHHHHhcCC-EEEEEeecCchHHHHhhhhc--CCcceeEeeccCCHHHHHHHHHHHHHhcc
Confidence            3467899999999999999999999999 88888766555554443322  2378899999999999988875       


Q ss_pred             --CccEEEEeccCCCCC-----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 --GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                        +.-.||||||+....     ...+++...+++|+.|+.++.++.    +++. +|+|++||+.+--..+..       
T Consensus       104 ~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~GR~~~p~~-------  175 (322)
T KOG1610|consen  104 EDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLGRVALPAL-------  175 (322)
T ss_pred             cccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEecccccCccCccc-------
Confidence              457899999965431     123456899999999998888876    3443 699999997764433332       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCC
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLM  199 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~  199 (307)
                                   ++|..||+..|.+...+.++   +|++|.++-||..-++..
T Consensus       176 -------------g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~  216 (322)
T KOG1610|consen  176 -------------GPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLA  216 (322)
T ss_pred             -------------ccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccC
Confidence                         68999999999887665544   699999999996555543

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.75  E-value=7.7e-17  Score=127.09  Aligned_cols=208  Identities=19%  Similarity=0.158  Sum_probs=142.5

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHC-CCCeEEEEeCCCCCC-cccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      .+.|+||||+.+||..|+++|++. |...+++..|+++++ ..+..... .+.++++++.|+++.+++.++++       
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~-~d~rvHii~Ldvt~deS~~~~~~~V~~iVg   81 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSK-SDSRVHIIQLDVTCDESIDNFVQEVEKIVG   81 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhc-cCCceEEEEEecccHHHHHHHHHHHHhhcc
Confidence            457999999999999999999976 663455566656553 22222111 22399999999999988887765       


Q ss_pred             --CccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCC-----------cEEEEecCcceecc
Q 021819           80 --GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGV-----------RRVVVTSSISAIVP  137 (307)
Q Consensus        80 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-----------~~~v~iSS~~~~~~  137 (307)
                        +.|.+|+|||....     ....+.+.+.+++|..++..+.|.+    ++...           ..+|++||.++-.+
T Consensus        82 ~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~  161 (249)
T KOG1611|consen   82 SDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIG  161 (249)
T ss_pred             cCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccC
Confidence              56999999997654     2233456899999999988888876    22221           26999998655311


Q ss_pred             CCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHH
Q 021819          138 NPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLL  214 (307)
Q Consensus       138 ~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~  214 (307)
                      ...                 ......|..||.+.....+.++-+   .++-++.++||.|-++....             
T Consensus       162 ~~~-----------------~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~-------------  211 (249)
T KOG1611|consen  162 GFR-----------------PGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGK-------------  211 (249)
T ss_pred             CCC-----------------CcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCC-------------
Confidence            101                 011146999999999888876644   47888899999998876432             


Q ss_pred             cCCCCCCCCcccCcccHHHHHHHHHHhhcCC--CCCce-EEecCCcc
Q 021819          215 QGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGR-YLCTNGIY  258 (307)
Q Consensus       215 ~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~-~~~~~~~~  258 (307)
                                 ...+++++.+..++..+.+-  +..|. |+-.+.++
T Consensus       212 -----------~a~ltveeSts~l~~~i~kL~~~hnG~ffn~dlt~i  247 (249)
T KOG1611|consen  212 -----------KAALTVEESTSKLLASINKLKNEHNGGFFNRDGTPI  247 (249)
T ss_pred             -----------CcccchhhhHHHHHHHHHhcCcccCcceEccCCCcC
Confidence                       22468888888888877653  33343 45444443

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.74  E-value=5.1e-18  Score=127.97  Aligned_cols=222  Identities=17%  Similarity=0.138  Sum_probs=154.6

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcC---cc
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG---CK   82 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~---~d   82 (307)
                      .+.++.|++||+.-+||+.++++|.+.|. +|+++.|++.....+-..   .+.-+..+.+|+.+.+.+.+++..   +|
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aGA-~ViAvaR~~a~L~sLV~e---~p~~I~Pi~~Dls~wea~~~~l~~v~pid   79 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGA-QVIAVARNEANLLSLVKE---TPSLIIPIVGDLSAWEALFKLLVPVFPID   79 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcCC-EEEEEecCHHHHHHHHhh---CCcceeeeEecccHHHHHHHhhcccCchh
Confidence            34688999999999999999999999999 999999987766555433   221478899999999988888763   69


Q ss_pred             EEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHhc----C-CcEEEEecCcceeccCCCCCCcccccCCCCc
Q 021819           83 GVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (307)
Q Consensus        83 ~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~  153 (307)
                      .++|+||...-    +...+.....|++|+.+..++.+...+.    + -+.+|++||.++..+..+             
T Consensus        80 gLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~n-------------  146 (245)
T KOG1207|consen   80 GLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDN-------------  146 (245)
T ss_pred             hhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCC-------------
Confidence            99999997543    2223445788999999988888875432    2 256999999776433333             


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCccc
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  230 (307)
                             ++.|..+|.+.+.+.+.++-+   ..|+++.+.|..|.++.....++-. ..-..++.+.      ....|..
T Consensus       147 -------HtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP-~K~k~mL~ri------Pl~rFaE  212 (245)
T KOG1207|consen  147 -------HTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDP-DKKKKMLDRI------PLKRFAE  212 (245)
T ss_pred             -------ceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCc-hhccchhhhC------chhhhhH
Confidence                   255666666666665555444   3689999999999887654432211 1111112211      1345778


Q ss_pred             HHHHHHHHHHhhcCCCC--CceEEecCCcc
Q 021819          231 VKDVAKAQVLLFESPAA--SGRYLCTNGIY  258 (307)
Q Consensus       231 ~~dva~~~~~~~~~~~~--~g~~~~~~~~~  258 (307)
                      +++++.++.+++.....  .|.-+..++++
T Consensus       213 V~eVVnA~lfLLSd~ssmttGstlpveGGf  242 (245)
T KOG1207|consen  213 VDEVVNAVLFLLSDNSSMTTGSTLPVEGGF  242 (245)
T ss_pred             HHHHHhhheeeeecCcCcccCceeeecCCc
Confidence            89999999998876543  35444444443

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.73  E-value=1.8e-16  Score=135.80  Aligned_cols=224  Identities=18%  Similarity=0.111  Sum_probs=153.6

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCC-CCCCceEEEEcccCChhHHHHHhc-----
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPG-AGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~-~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      .++++++|||||.+||.++++.|..+|. +|+...|+....+.+.. +.. ....++.++++|++|.++++++.+     
T Consensus        33 ~~~~~~vVTGansGIG~eta~~La~~Ga-~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~  111 (314)
T KOG1208|consen   33 LSGKVALVTGATSGIGFETARELALRGA-HVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKK  111 (314)
T ss_pred             CCCcEEEEECCCCchHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhc
Confidence            4568999999999999999999999998 99999998644433322 221 223378889999999999888775     


Q ss_pred             --CccEEEEeccCCCCCC--CCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 --GCKGVFHVASPCTLED--PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                        ..|++|||||++....  ..+..+..+.+|..|...|.+.+    +.....|||++||... ...... ...-.|...
T Consensus       112 ~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~-~~l~~~~~~  189 (314)
T KOG1208|consen  112 EGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDL-KDLSGEKAK  189 (314)
T ss_pred             CCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccch-hhccchhcc
Confidence              4699999999887633  33457899999999988888776    3333369999999664 111111 111111111


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHhc--CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (307)
                      .   |..  ...|+.||.+-..+..+++++.  |+.+..+.||.|.++..... ......+........         +-
T Consensus       190 ~---~~~--~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r~-~~~~~~l~~~l~~~~---------~k  254 (314)
T KOG1208|consen  190 L---YSS--DAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSRV-NLLLRLLAKKLSWPL---------TK  254 (314)
T ss_pred             C---ccc--hhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceecc-hHHHHHHHHHHHHHh---------cc
Confidence            0   111  1259999999988888888775  69999999999988844331 222222222222110         12


Q ss_pred             cHHHHHHHHHHhhcCCCCC
Q 021819          230 PVKDVAKAQVLLFESPAAS  248 (307)
Q Consensus       230 ~~~dva~~~~~~~~~~~~~  248 (307)
                      +.++-|...+.++.+++..
T Consensus       255 s~~~ga~t~~~~a~~p~~~  273 (314)
T KOG1208|consen  255 SPEQGAATTCYAALSPELE  273 (314)
T ss_pred             CHHHHhhheehhccCcccc
Confidence            6788888888888887543

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.70  E-value=8.4e-16  Score=128.74  Aligned_cols=208  Identities=14%  Similarity=0.066  Sum_probs=135.9

Q ss_pred             HHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc----CccEEEEeccCCCCCCCCChh
Q 021819           25 LVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----GCKGVFHVASPCTLEDPVDPE  100 (307)
Q Consensus        25 l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----~~d~vi~~a~~~~~~~~~~~~  100 (307)
                      +++.|+++|+ +|++++|+.....           ...++++|++|.+++.++++    ++|+||||||...    ..++
T Consensus         1 ~a~~l~~~G~-~Vv~~~r~~~~~~-----------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~----~~~~   64 (241)
T PRK12428          1 TARLLRFLGA-RVIGVDRREPGMT-----------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG----TAPV   64 (241)
T ss_pred             ChHHHHhCCC-EEEEEeCCcchhh-----------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC----CCCH
Confidence            4788999999 8999998765421           23467899999999988886    5899999999753    2457


Q ss_pred             hhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcccccC----CCCch--h----hhcccCccHHHHH
Q 021819          101 KELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDET----SWTDL--E----YCKSRKKWYPVSK  168 (307)
Q Consensus       101 ~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~E~----~~~~~--~----~~~~~~~~y~~sK  168 (307)
                      ...+++|+.++..+++++.+.  ..++||++||..++.....   .+..|.    .....  .    .+......|+.+|
T Consensus        65 ~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK  141 (241)
T PRK12428         65 ELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQR---LELHKALAATASFDEGAAWLAAHPVALATGYQLSK  141 (241)
T ss_pred             HHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccc---hHHHHhhhccchHHHHHHhhhccCCCcccHHHHHH
Confidence            889999999999999998754  2368999999776431111   111110    00000  0    0111225799999


Q ss_pred             HHHHHHHHHHH----HhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcC
Q 021819          169 TLAEKAAWEFA----EKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFES  244 (307)
Q Consensus       169 ~~~e~~~~~~~----~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~  244 (307)
                      ...+.+.+.++    ...|+++++|+||.+.++...........  ..... ..    .....+..++|+|+++.+++..
T Consensus       142 ~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~--~~~~~-~~----~~~~~~~~pe~va~~~~~l~s~  214 (241)
T PRK12428        142 EALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQ--ERVDS-DA----KRMGRPATADEQAAVLVFLCSD  214 (241)
T ss_pred             HHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhh--Hhhhh-cc----cccCCCCCHHHHHHHHHHHcCh
Confidence            99998888777    33589999999999998864322110000  00000 00    0122357899999999998754


Q ss_pred             C--CCCceEEecCCcc
Q 021819          245 P--AASGRYLCTNGIY  258 (307)
Q Consensus       245 ~--~~~g~~~~~~~~~  258 (307)
                      .  ...|..+..++++
T Consensus       215 ~~~~~~G~~i~vdgg~  230 (241)
T PRK12428        215 AARWINGVNLPVDGGL  230 (241)
T ss_pred             hhcCccCcEEEecCch
Confidence            3  2346665555554

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.69  E-value=8.2e-16  Score=129.57  Aligned_cols=172  Identities=20%  Similarity=0.173  Sum_probs=123.0

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC--CcccccCCCCCC-CceEEEEcccCC-hhHHHHHhc---
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGD-ANLRVFEADVLD-SGAVSRAVE---   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~--~~~~~~~~~~~~-~~~~~i~~D~~d-~~~~~~~~~---   79 (307)
                      ..+|+++||||+++||+++++.|+++|+ .|++..|+...  .+.+........ ..+....+|+++ .++++.+++   
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~   81 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAREGA-RVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE   81 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            3478999999999999999999999999 77777775443  222211111110 157778899998 887776664   


Q ss_pred             ----CccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHHHhcC-CcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 ----GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 ----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                          .+|++|||||....     ....+.+++.+++|+.+...+.+++...- .++||++||..+. ..+..        
T Consensus        82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~~--------  152 (251)
T COG1028          82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPPG--------  152 (251)
T ss_pred             HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCCC--------
Confidence                47999999998542     22335678999999999999888543321 1189999997764 32220        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCC
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLM  199 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~  199 (307)
                                 ...|+.||...+.+.+.++.+   .|++++.+.||.+.++..
T Consensus       153 -----------~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~  194 (251)
T COG1028         153 -----------QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMT  194 (251)
T ss_pred             -----------cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcch
Confidence                       157999999998888777644   589999999997765543

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.68  E-value=1.7e-15  Score=125.48  Aligned_cols=205  Identities=21%  Similarity=0.172  Sum_probs=148.7

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCC--CCCceEEEEcccCChhHHHHHhcC-------
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA--GDANLRVFEADVLDSGAVSRAVEG-------   80 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~i~~D~~d~~~~~~~~~~-------   80 (307)
                      .+|+||||+.+||..++..+..+|. .|.++.|+..+...++.....  ....+.+..+|+.|++++...+++       
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga-~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~  112 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGA-DVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGP  112 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccC-ceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCC
Confidence            5899999999999999999999999 999999988877665543221  111367888999999998888763       


Q ss_pred             ccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHHHhc-----CCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           81 CKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF-----GVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        81 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                      +|.+|||||..-...    +....+..+++|..|+.++++++...     +.++|+.+||..+.++-.+.          
T Consensus       113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~Gy----------  182 (331)
T KOG1210|consen  113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGY----------  182 (331)
T ss_pred             cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccc----------
Confidence            599999999765432    22345889999999999999987432     24589999998887776664          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHH---hcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCC--CCCCccc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD--TQEYHWL  226 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~---~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  226 (307)
                                +.|..+|.+...+...+.+   ++++.++..-|+.+.+|+-.....           .+|.  .+-+..-
T Consensus       183 ----------saYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~-----------tkP~~t~ii~g~s  241 (331)
T KOG1210|consen  183 ----------SAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENK-----------TKPEETKIIEGGS  241 (331)
T ss_pred             ----------cccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccc-----------cCchheeeecCCC
Confidence                      4566666655555444433   358999999999998886432210           1111  1112345


Q ss_pred             CcccHHHHHHHHHHhhcCCC
Q 021819          227 GAVPVKDVAKAQVLLFESPA  246 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~~  246 (307)
                      +.+..+++|++++.-+....
T Consensus       242 s~~~~e~~a~~~~~~~~rg~  261 (331)
T KOG1210|consen  242 SVIKCEEMAKAIVKGMKRGN  261 (331)
T ss_pred             CCcCHHHHHHHHHhHHhhcC
Confidence            56899999999988776543

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.68  E-value=4.1e-16  Score=121.63  Aligned_cols=166  Identities=20%  Similarity=0.233  Sum_probs=126.7

Q ss_pred             CcEEEEeCC-chhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--------
Q 021819            9 EETVCVTGA-NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--------   79 (307)
Q Consensus         9 ~~~ilItGa-tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--------   79 (307)
                      .|+|+|||+ +|+||.+|++.+.++|+ .|++..|+-+.-..+....     ++.....|+++++++.++..        
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~-----gl~~~kLDV~~~~~V~~v~~evr~~~~G   80 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQF-----GLKPYKLDVSKPEEVVTVSGEVRANPDG   80 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhh-----CCeeEEeccCChHHHHHHHHHHhhCCCC
Confidence            578999887 79999999999999999 9999999766554443211     67888999999999887654        


Q ss_pred             CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHhc---CCcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           80 GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        80 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      ..|.++|+||..-.    +.....-+..+++|+.|..++.++....   .-+.||++.|..++-+.+-.           
T Consensus        81 kld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~-----------  149 (289)
T KOG1209|consen   81 KLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFG-----------  149 (289)
T ss_pred             ceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchh-----------
Confidence            46999999996533    2222334789999999988888776422   12579999998776554432           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHH---HhcCCcEEEEecCceeCCCCC
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFA---EKHGVDVVAIHPATCLGPLMQ  200 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~---~~~~i~~~ivrp~~v~g~~~~  200 (307)
                               +.|..||.+...+.+.+.   +.+|++++.+-+|.|-++..+
T Consensus       150 ---------~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~  191 (289)
T KOG1209|consen  150 ---------SIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIAD  191 (289)
T ss_pred             ---------hhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceeccccc
Confidence                     679999999998876553   346999999999998776543

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.66  E-value=1.2e-15  Score=121.91  Aligned_cols=162  Identities=24%  Similarity=0.302  Sum_probs=116.3

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCC-CC---cccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DS---SHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~-~~---~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +++||||+|.||..+++.|.+++..+|+.+.|+.. ..   +.+..+...+. ++.++.+|++|++++.++++       
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~-~v~~~~~Dv~d~~~v~~~~~~~~~~~~   80 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGA-RVEYVQCDVTDPEAVAAALAQLRQRFG   80 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT--EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCC-ceeeeccCccCHHHHHHHHHHHHhccC
Confidence            68999999999999999999998878999999832 21   12223322222 78999999999999999886       


Q ss_pred             CccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchh
Q 021819           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~  155 (307)
                      .++.|||+|+......    ..+.....+..-+.++.+|.+++....+..+|.+||++++.+.++.              
T Consensus        81 ~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~gq--------------  146 (181)
T PF08659_consen   81 PIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPGQ--------------  146 (181)
T ss_dssp             -EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TTB--------------
T ss_pred             CcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcch--------------
Confidence            3589999999865421    2223466777789999999999998889999999999988887764              


Q ss_pred             hhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCce
Q 021819          156 YCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATC  194 (307)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v  194 (307)
                            ..|...-...+.+.+... ..+.++.+|.-+..
T Consensus       147 ------~~YaaAN~~lda~a~~~~-~~g~~~~sI~wg~W  178 (181)
T PF08659_consen  147 ------SAYAAANAFLDALARQRR-SRGLPAVSINWGAW  178 (181)
T ss_dssp             ------HHHHHHHHHHHHHHHHHH-HTTSEEEEEEE-EB
T ss_pred             ------HhHHHHHHHHHHHHHHHH-hCCCCEEEEEcccc
Confidence                  569999999988877554 35899998887643

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.64  E-value=6.7e-16  Score=116.46  Aligned_cols=221  Identities=19%  Similarity=0.189  Sum_probs=157.2

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC-cccccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      +.++-..+||||..++|++-++.|..+|. .|..++...++- +..+++..    ++.+.+.|+++++++..+++     
T Consensus         6 s~kglvalvtggasglg~ataerlakqga-sv~lldlp~skg~~vakelg~----~~vf~padvtsekdv~aala~ak~k   80 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGA-SVALLDLPQSKGADVAKELGG----KVVFTPADVTSEKDVRAALAKAKAK   80 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCc-eEEEEeCCcccchHHHHHhCC----ceEEeccccCcHHHHHHHHHHHHhh
Confidence            44567899999999999999999999999 888888855553 34444432    78899999999999988775     


Q ss_pred             --CccEEEEeccCCCC----------CCCCChhhhhhhhhHHHHHHHHHHHHh--------c-C-CcEEEEecCcceecc
Q 021819           80 --GCKGVFHVASPCTL----------EDPVDPEKELILPAVQGTLNVLEAAKR--------F-G-VRRVVVTSSISAIVP  137 (307)
Q Consensus        80 --~~d~vi~~a~~~~~----------~~~~~~~~~~~~~n~~~~~~l~~~~~~--------~-~-~~~~v~iSS~~~~~~  137 (307)
                        ..|..+||||+...          .-..++..+.+++|+.||.|+++....        + | .+-+|+..|.+++.+
T Consensus        81 fgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdg  160 (260)
T KOG1199|consen   81 FGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDG  160 (260)
T ss_pred             ccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecC
Confidence              46999999997542          112345578899999999999987631        1 2 235888888888777


Q ss_pred             CCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCC
Q 021819          138 NPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS  217 (307)
Q Consensus       138 ~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~  217 (307)
                      +.+.            ..|+.+|....|++--.+.++.     ..||+++.+-||.+-+|.....    +...+.++...
T Consensus       161 q~gq------------aaysaskgaivgmtlpiardla-----~~gir~~tiapglf~tpllssl----pekv~~fla~~  219 (260)
T KOG1199|consen  161 QTGQ------------AAYSASKGAIVGMTLPIARDLA-----GDGIRFNTIAPGLFDTPLLSSL----PEKVKSFLAQL  219 (260)
T ss_pred             ccch------------hhhhcccCceEeeechhhhhcc-----cCceEEEeecccccCChhhhhh----hHHHHHHHHHh
Confidence            7664            4455666655555554444443     3599999999999888775443    33333333322


Q ss_pred             CCCCCCcccCcccHHHHHHHHHHhhcCCCCCceEEecCC
Q 021819          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNG  256 (307)
Q Consensus       218 ~~~~~~~~~~~i~~~dva~~~~~~~~~~~~~g~~~~~~~  256 (307)
                       +++   ....-++.+.+..+-.+++++-..|..+--|+
T Consensus       220 -ipf---psrlg~p~eyahlvqaiienp~lngevir~dg  254 (260)
T KOG1199|consen  220 -IPF---PSRLGHPHEYAHLVQAIIENPYLNGEVIRFDG  254 (260)
T ss_pred             -CCC---chhcCChHHHHHHHHHHHhCcccCCeEEEecc
Confidence             112   22345888899998899999998886554443

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.64  E-value=2.8e-15  Score=118.35  Aligned_cols=212  Identities=18%  Similarity=0.102  Sum_probs=145.8

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCC-eEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYT-SINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      ..+.+++||+|.+||..+++.+.+.+.. -+.+..|.....+.++...   .+......+|++....+.++.+       
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~---gd~~v~~~g~~~e~~~l~al~e~~r~k~g   81 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAY---GDDFVHVVGDITEEQLLGALREAPRKKGG   81 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEe---cCCcceechHHHHHHHHHHHHhhhhhcCC
Confidence            3578999999999999999999988762 2444444333322222111   1123344466666655555443       


Q ss_pred             CccEEEEeccCCCC-------CCCCChhhhhhhhhHHHHHHHHHHHHhc--C---CcEEEEecCcceeccCCCCCCcccc
Q 021819           80 GCKGVFHVASPCTL-------EDPVDPEKELILPAVQGTLNVLEAAKRF--G---VRRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        80 ~~d~vi~~a~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~---~~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                      +-|+||||||....       ....+.|.++++.|+.+...|.+.+.+.  +   .+-+|++||.+++-+....      
T Consensus        82 kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~w------  155 (253)
T KOG1204|consen   82 KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSW------  155 (253)
T ss_pred             ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHH------
Confidence            45999999996653       2334567999999999999888877543  2   2679999998876655443      


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc--CCcEEEEecCceeCCCCCCC------CcchHHHHHHHHcCCCC
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPY------LNASCAVLQQLLQGSKD  219 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~i~~~ivrp~~v~g~~~~~~------~~~~~~~~~~~~~~~~~  219 (307)
                                    +.|+.+|++.+.+.+.++.+.  ++++..++||.|.++.+...      ......++++.+..   
T Consensus       156 --------------a~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~---  218 (253)
T KOG1204|consen  156 --------------AAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKES---  218 (253)
T ss_pred             --------------HHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhc---
Confidence                          679999999999999887654  89999999999988765322      22333444444443   


Q ss_pred             CCCCcccCcccHHHHHHHHHHhhcCC-CCCceE
Q 021819          220 TQEYHWLGAVPVKDVAKAQVLLFESP-AASGRY  251 (307)
Q Consensus       220 ~~~~~~~~~i~~~dva~~~~~~~~~~-~~~g~~  251 (307)
                            -..+++.+.|+.+..++++. ...|.|
T Consensus       219 ------~~ll~~~~~a~~l~~L~e~~~f~sG~~  245 (253)
T KOG1204|consen  219 ------GQLLDPQVTAKVLAKLLEKGDFVSGQH  245 (253)
T ss_pred             ------CCcCChhhHHHHHHHHHHhcCcccccc
Confidence                  34578899999999888877 555643

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.63  E-value=4.9e-15  Score=154.95  Aligned_cols=169  Identities=21%  Similarity=0.211  Sum_probs=132.3

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHC-CCCeEEEEeCCCCCC---c-----------------------------------
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDS---S-----------------------------------   48 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~---~-----------------------------------   48 (307)
                      ++++++||||+++||..++++|+++ |+ +|+++.|+....   .                                   
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga-~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~ 2074 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQA-HFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVR 2074 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCC-EEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccc
Confidence            4679999999999999999999998 57 899999872100   0                                   


Q ss_pred             ----------ccccCCCCCCCceEEEEcccCChhHHHHHhc------CccEEEEeccCCCC----CCCCChhhhhhhhhH
Q 021819           49 ----------HLFALPGAGDANLRVFEADVLDSGAVSRAVE------GCKGVFHVASPCTL----EDPVDPEKELILPAV  108 (307)
Q Consensus        49 ----------~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~  108 (307)
                                .+..+...+ .++.++.+|++|.+++.++++      .+|+|||+||....    ....+++.+.+++|+
T Consensus      2075 ~~~~~~ei~~~la~l~~~G-~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv 2153 (2582)
T TIGR02813      2075 PVLSSLEIAQALAAFKAAG-ASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKV 2153 (2582)
T ss_pred             ccchhHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHH
Confidence                      000011112 267899999999999888775      47999999997653    223456789999999


Q ss_pred             HHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc-CCcEE
Q 021819          109 QGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH-GVDVV  187 (307)
Q Consensus       109 ~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-~i~~~  187 (307)
                      .|+.++++++.....++||++||+.++++..+.                    ..|+.+|...+.+.+.++.+. +++++
T Consensus      2154 ~G~~~Ll~al~~~~~~~IV~~SSvag~~G~~gq--------------------s~YaaAkaaL~~la~~la~~~~~irV~ 2213 (2582)
T TIGR02813      2154 DGLLSLLAALNAENIKLLALFSSAAGFYGNTGQ--------------------SDYAMSNDILNKAALQLKALNPSAKVM 2213 (2582)
T ss_pred             HHHHHHHHHHHHhCCCeEEEEechhhcCCCCCc--------------------HHHHHHHHHHHHHHHHHHHHcCCcEEE
Confidence            999999999988777889999999888776653                    569999998888887777665 68999


Q ss_pred             EEecCceeCCC
Q 021819          188 AIHPATCLGPL  198 (307)
Q Consensus       188 ivrp~~v~g~~  198 (307)
                      ++.||.+-|+.
T Consensus      2214 sI~wG~wdtgm 2224 (2582)
T TIGR02813      2214 SFNWGPWDGGM 2224 (2582)
T ss_pred             EEECCeecCCc
Confidence            99999987754

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.63  E-value=2.5e-14  Score=124.57  Aligned_cols=213  Identities=24%  Similarity=0.156  Sum_probs=135.1

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCCh-hHHHHHhc----Cc
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS-GAVSRAVE----GC   81 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~-~~~~~~~~----~~   81 (307)
                      .++++|+|+||||.+|+.+++.|+++|+ .|.+++|+..+...+........ +...+..|...+ +....+..    ..
T Consensus        77 ~~~~~VlVvGatG~vG~~iv~~llkrgf-~vra~VRd~~~a~~~~~~~~~d~-~~~~v~~~~~~~~d~~~~~~~~~~~~~  154 (411)
T KOG1203|consen   77 KKPTTVLVVGATGKVGRRIVKILLKRGF-SVRALVRDEQKAEDLLGVFFVDL-GLQNVEADVVTAIDILKKLVEAVPKGV  154 (411)
T ss_pred             CCCCeEEEecCCCchhHHHHHHHHHCCC-eeeeeccChhhhhhhhccccccc-ccceeeeccccccchhhhhhhhccccc
Confidence            4567999999999999999999999998 99999998776655433111111 344455554433 33333333    23


Q ss_pred             cEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccC
Q 021819           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK  161 (307)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  161 (307)
                      .+++-|++......   +...-..+...|+.|++++|+..|++|+|++||++.--.....            +.+..  .
T Consensus       155 ~~v~~~~ggrp~~e---d~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~------------~~~~~--~  217 (411)
T KOG1203|consen  155 VIVIKGAGGRPEEE---DIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPP------------NILLL--N  217 (411)
T ss_pred             eeEEecccCCCCcc---cCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCc------------hhhhh--h
Confidence            56777766544321   2234456889999999999999999999999986653222221            10000  1


Q ss_pred             ccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHh
Q 021819          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLL  241 (307)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~  241 (307)
                      ..+-.+|..+|.++.    +.|+++++|||+...-+.........       ...+...-.+..-..+.-.|+|+.++.+
T Consensus       218 ~~~~~~k~~~e~~~~----~Sgl~ytiIR~g~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~i~r~~vael~~~a  286 (411)
T KOG1203|consen  218 GLVLKAKLKAEKFLQ----DSGLPYTIIRPGGLEQDTGGQREVVV-------DDEKELLTVDGGAYSISRLDVAELVAKA  286 (411)
T ss_pred             hhhhHHHHhHHHHHH----hcCCCcEEEeccccccCCCCcceecc-------cCccccccccccceeeehhhHHHHHHHH
Confidence            345577888887776    78999999999976543322110000       0000000011111357889999999999


Q ss_pred             hcCCCCCc
Q 021819          242 FESPAASG  249 (307)
Q Consensus       242 ~~~~~~~g  249 (307)
                      +.+....+
T Consensus       287 ll~~~~~~  294 (411)
T KOG1203|consen  287 LLNEAATF  294 (411)
T ss_pred             Hhhhhhcc
Confidence            98887766

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.56  E-value=2.8e-14  Score=118.44  Aligned_cols=194  Identities=13%  Similarity=0.094  Sum_probs=141.1

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccC-CCCCCCceEEEEcccCChhH----HHHHhcC--c
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-PGAGDANLRVFEADVLDSGA----VSRAVEG--C   81 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~i~~D~~d~~~----~~~~~~~--~   81 (307)
                      +.-.+|||||.+||++.+++|+++|. +|+.+.|+.++.+..+.. .......++++..|.++.++    +.+.+++  +
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~V  127 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDV  127 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCce
Confidence            46899999999999999999999999 799999999888776543 22222368899999987654    5555554  5


Q ss_pred             cEEEEeccCCCC------CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           82 KGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        82 d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                      -++|||+|.+..      ..+.+.....+.+|+.++..+.+..    .+.+-+-+|++||.++.-+.+..          
T Consensus       128 gILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~----------  197 (312)
T KOG1014|consen  128 GILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLL----------  197 (312)
T ss_pred             EEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhH----------
Confidence            679999998763      1122234678889988877776665    34455689999998876655443          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (307)
                                +.|+.+|...+.+-..+.++   .||.+-.+-|..|-++......                    ..+..
T Consensus       198 ----------s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~~--------------------~sl~~  247 (312)
T KOG1014|consen  198 ----------SVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYRK--------------------PSLFV  247 (312)
T ss_pred             ----------HHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccCC--------------------CCCcC
Confidence                      67999999888776666555   4899999999999887654331                    12233


Q ss_pred             ccHHHHHHHHHHhhc
Q 021819          229 VPVKDVAKAQVLLFE  243 (307)
Q Consensus       229 i~~~dva~~~~~~~~  243 (307)
                      .+++..|+..+..+.
T Consensus       248 ps~~tfaksal~tiG  262 (312)
T KOG1014|consen  248 PSPETFAKSALNTIG  262 (312)
T ss_pred             cCHHHHHHHHHhhcC
Confidence            466777777666555

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.56  E-value=7e-14  Score=110.47  Aligned_cols=206  Identities=18%  Similarity=0.117  Sum_probs=150.0

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEeccC
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASP   90 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a~~   90 (307)
                      +.++.|+.||.|+++++...+.++ .|..+.|+..+ +.+.....    .+.+.++|....+-+...+.+...++-+++.
T Consensus        54 ~tlvlggnpfsgs~vlk~A~~vv~-svgilsen~~k-~~l~sw~~----~vswh~gnsfssn~~k~~l~g~t~v~e~~gg  127 (283)
T KOG4288|consen   54 WTLVLGGNPFSGSEVLKNATNVVH-SVGILSENENK-QTLSSWPT----YVSWHRGNSFSSNPNKLKLSGPTFVYEMMGG  127 (283)
T ss_pred             HHhhhcCCCcchHHHHHHHHhhce-eeeEeecccCc-chhhCCCc----ccchhhccccccCcchhhhcCCcccHHHhcC
Confidence            678999999999999999999999 89888887542 22222221    6778888887777677778888999999877


Q ss_pred             CCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHHH
Q 021819           91 CTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTL  170 (307)
Q Consensus        91 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~  170 (307)
                      ..      ....+..+|-....+-.+++.+.|+++|+|||- .. ++.+..           .+       ..|-.+|..
T Consensus       128 fg------n~~~m~~ing~ani~a~kaa~~~gv~~fvyISa-~d-~~~~~~-----------i~-------rGY~~gKR~  181 (283)
T KOG4288|consen  128 FG------NIILMDRINGTANINAVKAAAKAGVPRFVYISA-HD-FGLPPL-----------IP-------RGYIEGKRE  181 (283)
T ss_pred             cc------chHHHHHhccHhhHHHHHHHHHcCCceEEEEEh-hh-cCCCCc-----------cc-------hhhhccchH
Confidence            43      245777888888999999999999999999994 32 222221           01       359999999


Q ss_pred             HHHHHHHHHHhcCCcEEEEecCceeCCCCCCCC----cchHHHHHHHHcCC------CCCCCCcccCcccHHHHHHHHHH
Q 021819          171 AEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL----NASCAVLQQLLQGS------KDTQEYHWLGAVPVKDVAKAQVL  240 (307)
Q Consensus       171 ~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~----~~~~~~~~~~~~~~------~~~~~~~~~~~i~~~dva~~~~~  240 (307)
                      +|.-+.+   .++.+-+++|||++||.+.-+..    ......+.......      ...++....+.+.++++|.+.+.
T Consensus       182 AE~Ell~---~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~  258 (283)
T KOG4288|consen  182 AEAELLK---KFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALK  258 (283)
T ss_pred             HHHHHHH---hcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHH
Confidence            9965543   56799999999999998543321    11222223333322      22235567789999999999999


Q ss_pred             hhcCCCCCceE
Q 021819          241 LFESPAASGRY  251 (307)
Q Consensus       241 ~~~~~~~~g~~  251 (307)
                      ++++|...|.+
T Consensus       259 ai~dp~f~Gvv  269 (283)
T KOG4288|consen  259 AIEDPDFKGVV  269 (283)
T ss_pred             hccCCCcCcee
Confidence            99999876643

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.55  E-value=1.9e-13  Score=103.64  Aligned_cols=160  Identities=18%  Similarity=0.189  Sum_probs=120.7

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCC-CCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      +||..+|.||||-.|+.|++++++.+ +..|+++.|+.........       .+.....|...-++....+++.|+.|.
T Consensus        17 q~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at~k-------~v~q~~vDf~Kl~~~a~~~qg~dV~Fc   89 (238)
T KOG4039|consen   17 QNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPATDK-------VVAQVEVDFSKLSQLATNEQGPDVLFC   89 (238)
T ss_pred             hccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccccc-------eeeeEEechHHHHHHHhhhcCCceEEE
Confidence            46799999999999999999999997 4689999887533222111       566677888777778888889999999


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHH
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (307)
                      +-|....-   ...+-.++++-.-.+.+++++++.|+++|+.+||.++   ++..                   .-.|..
T Consensus        90 aLgTTRgk---aGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GA---d~sS-------------------rFlY~k  144 (238)
T KOG4039|consen   90 ALGTTRGK---AGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGA---DPSS-------------------RFLYMK  144 (238)
T ss_pred             eecccccc---cccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCC---Cccc-------------------ceeeee
Confidence            98865541   1234677888888899999999999999999999665   2111                   025888


Q ss_pred             HHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC
Q 021819          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY  202 (307)
Q Consensus       167 sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~  202 (307)
                      +|...|.-+.++  + --+++|+|||.+.|......
T Consensus       145 ~KGEvE~~v~eL--~-F~~~~i~RPG~ll~~R~esr  177 (238)
T KOG4039|consen  145 MKGEVERDVIEL--D-FKHIIILRPGPLLGERTESR  177 (238)
T ss_pred             ccchhhhhhhhc--c-ccEEEEecCcceeccccccc
Confidence            888888766533  1 23789999999999876544

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.45  E-value=1.2e-11  Score=98.13  Aligned_cols=223  Identities=13%  Similarity=0.091  Sum_probs=146.5

Q ss_pred             ccCCcEEEEeCC--chhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            6 EKEEETVCVTGA--NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         6 ~~~~~~ilItGa--tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      .+++|++||+|.  ...|+..+++.|.++|. ++......+.-.+...++.+.-. ...+++||+++.+++.++++    
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GA-eL~fTy~~e~l~krv~~la~~~~-s~~v~~cDV~~d~~i~~~f~~i~~   80 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGA-ELAFTYQGERLEKRVEELAEELG-SDLVLPCDVTNDESIDALFATIKK   80 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHHHhhcc-CCeEEecCCCCHHHHHHHHHHHHH
Confidence            457899999998  56899999999999999 88777766544444444433222 33578999999999888876    


Q ss_pred             ---CccEEEEeccCCCC--------CCCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCccc
Q 021819           80 ---GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVF  146 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~  146 (307)
                         +.|.+||+.+..+.        +.+.+.+...+++-..+-..++++++..  +.+.+|-+|    +++....     
T Consensus        81 ~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLt----Ylgs~r~-----  151 (259)
T COG0623          81 KWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLT----YLGSERV-----  151 (259)
T ss_pred             hhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEE----eccceee-----
Confidence               57999999998763        1223334455555566666777777654  234566655    3332211     


Q ss_pred             ccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCC
Q 021819          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (307)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (307)
                            -|+|     ++.|..|...|.-++.++.+.   |++++.|..|.|-+-...+. ..+..++.......|     
T Consensus       152 ------vPnY-----NvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI-~~f~~~l~~~e~~aP-----  214 (259)
T COG0623         152 ------VPNY-----NVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGI-GDFRKMLKENEANAP-----  214 (259)
T ss_pred             ------cCCC-----chhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhcc-ccHHHHHHHHHhhCC-----
Confidence                  2555     889999999999888877664   79999988887644322222 123344444333333     


Q ss_pred             cccCcccHHHHHHHHHHhhcCCC--CCceEEecCCc
Q 021819          224 HWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGI  257 (307)
Q Consensus       224 ~~~~~i~~~dva~~~~~~~~~~~--~~g~~~~~~~~  257 (307)
                       .+..++++||...-.+++..-.  ..|..+-+|.+
T Consensus       215 -l~r~vt~eeVG~tA~fLlSdLssgiTGei~yVD~G  249 (259)
T COG0623         215 -LRRNVTIEEVGNTAAFLLSDLSSGITGEIIYVDSG  249 (259)
T ss_pred             -ccCCCCHHHhhhhHHHHhcchhcccccceEEEcCC
Confidence             4556789999999777776433  33544444443

>PRK06720 hypothetical protein; Provisional

Probab=99.37  E-value=6.2e-12  Score=98.86  Aligned_cols=126  Identities=11%  Similarity=0.079  Sum_probs=82.2

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccc-ccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      +++++++||||+++||+++++.|.+.|+ +|++.+|+.+..... ..+..... ....+.+|+++.+++.++++      
T Consensus        14 l~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~v~~~~~~~   91 (169)
T PRK06720         14 LAGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGG-EALFVSYDMEKQGDWQRVISITLNAF   91 (169)
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999 899988875443222 22211111 56788999999988877653      


Q ss_pred             -CccEEEEeccCCCCCCCCCh--hhhhhhhhHHHHH----HHHHHHHhc-------CCcEEEEecCcce
Q 021819           80 -GCKGVFHVASPCTLEDPVDP--EKELILPAVQGTL----NVLEAAKRF-------GVRRVVVTSSISA  134 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~~~~~~--~~~~~~~n~~~~~----~l~~~~~~~-------~~~~~v~iSS~~~  134 (307)
                       ++|++|||||.........+  .......|+.++.    .+.....++       +.+||..+||.++
T Consensus        92 G~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (169)
T PRK06720         92 SRIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQ  160 (169)
T ss_pred             CCCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccc
Confidence             58999999997653222111  1111234444443    333333333       3468888888554

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.37  E-value=6.8e-12  Score=99.13  Aligned_cols=241  Identities=15%  Similarity=0.090  Sum_probs=151.1

Q ss_pred             CcEEEEeCCchhhHHHHHH-----HHHHCC----CCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc
Q 021819            9 EETVCVTGANGFIGTWLVK-----TLLDNN----YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE   79 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~-----~L~~~g----~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~   79 (307)
                      ..+.++-+.+|+|+..|..     ++-+.+    + .|..+.|++.+.+-.            +-+.|..-      +.-
T Consensus        12 sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h-~vtv~sR~pg~~rit------------w~el~~~G------ip~   72 (315)
T KOG3019|consen   12 SRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNH-AVTVLSRSPGKARIT------------WPELDFPG------IPI   72 (315)
T ss_pred             cccCCCCccccchhccccCcccccccCCCCccccc-ceEEEecCCCCcccc------------cchhcCCC------Cce
Confidence            4567888999999998887     333333    4 799999987765332            22222111      011


Q ss_pred             CccEEEEeccCCCCCCCCChhhhhhhhhH-----HHHHHHHHHHHhcC--CcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           80 GCKGVFHVASPCTLEDPVDPEKELILPAV-----QGTLNVLEAAKRFG--VRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~-----~~~~~l~~~~~~~~--~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      .||..+|.+|..... +..-|...++-++     ..+..++++..+..  .+.+|.+|..+ +|....  .+..+|+++.
T Consensus        73 sc~a~vna~g~n~l~-P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva-~y~pS~--s~eY~e~~~~  148 (315)
T KOG3019|consen   73 SCVAGVNAVGNNALL-PIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVA-VYVPSE--SQEYSEKIVH  148 (315)
T ss_pred             ehHHHHhhhhhhccC-chhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeE-Eecccc--cccccccccc
Confidence            344444444432221 1112333444443     45677888887663  45799999744 443222  2566676643


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHH
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK  232 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  232 (307)
                      ..        .--.++...|.-..+.-.....+++++|.|.|.|.+......++.  .-++..|.|+.-+.++++|||++
T Consensus       149 qg--------fd~~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~l--pF~~g~GGPlGsG~Q~fpWIHv~  218 (315)
T KOG3019|consen  149 QG--------FDILSRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGALAMMIL--PFQMGAGGPLGSGQQWFPWIHVD  218 (315)
T ss_pred             CC--------hHHHHHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhh--hhhhccCCcCCCCCeeeeeeehH
Confidence            22        122333333322111111236899999999999987544322222  23566778888888999999999


Q ss_pred             HHHHHHHHhhcCCCCCceEEec-CCcccHHHHHHHHHHhCCCCCCCccccCC
Q 021819          233 DVAKAQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFPVHRFVFQS  283 (307)
Q Consensus       233 dva~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (307)
                      |++..+-++++++...|..|.+ .++.+..|+.+.+.+++ +++-..+.|+.
T Consensus       219 DL~~li~~ale~~~v~GViNgvAP~~~~n~Ef~q~lg~aL-~Rp~~~pvP~f  269 (315)
T KOG3019|consen  219 DLVNLIYEALENPSVKGVINGVAPNPVRNGEFCQQLGSAL-SRPSWLPVPDF  269 (315)
T ss_pred             HHHHHHHHHHhcCCCCceecccCCCccchHHHHHHHHHHh-CCCcccCCcHH
Confidence            9999999999999999987754 68899999999999999 66666655543

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.28  E-value=1e-10  Score=92.53  Aligned_cols=156  Identities=10%  Similarity=0.066  Sum_probs=107.7

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcC-------cc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG-------CK   82 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-------~d   82 (307)
                      |+++||||||++|. +++.|.++|+ +|++..|++...+.+....... .++..+.+|++|++++.+++++       +|
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~-~V~v~~R~~~~~~~l~~~l~~~-~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id   77 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGF-HVSVIARREVKLENVKRESTTP-ESITPLPLDYHDDDALKLAIKSTIEKNGPFD   77 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcC-EEEEEECCHHHHHHHHHHhhcC-CcEEEEEccCCCHHHHHHHHHHHHHHcCCCe
Confidence            37999999988876 9999999999 8988888765544333211111 2678889999999999888763       46


Q ss_pred             EEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc----EEEEecCcceeccCCCCCCcccccCCCCchhhhc
Q 021819           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR----RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK  158 (307)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~----~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~  158 (307)
                      .+|+.+.                  +.++.++.++|++.|++    +|+++=++.+.                       
T Consensus        78 ~lv~~vh------------------~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~-----------------------  116 (177)
T PRK08309         78 LAVAWIH------------------SSAKDALSVVCRELDGSSETYRLFHVLGSAAS-----------------------  116 (177)
T ss_pred             EEEEecc------------------ccchhhHHHHHHHHccCCCCceEEEEeCCcCC-----------------------
Confidence            6666543                  33578899999999988    89987653330                       


Q ss_pred             ccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHH
Q 021819          159 SRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQ  238 (307)
Q Consensus       159 ~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~  238 (307)
                         .+    +...+...     .....+.=|..|++.-..                          .-.|++-+++++++
T Consensus       117 ---~~----~~~~~~~~-----~~~~~~~~i~lgf~~~~~--------------------------~~rwlt~~ei~~gv  158 (177)
T PRK08309        117 ---DP----RIPSEKIG-----PARCSYRRVILGFVLEDT--------------------------YSRWLTHEEISDGV  158 (177)
T ss_pred             ---ch----hhhhhhhh-----hcCCceEEEEEeEEEeCC--------------------------ccccCchHHHHHHH
Confidence               01    11112222     234566666677664432                          33578999999999


Q ss_pred             HHhhcCCCC
Q 021819          239 VLLFESPAA  247 (307)
Q Consensus       239 ~~~~~~~~~  247 (307)
                      +.+++++..
T Consensus       159 ~~~~~~~~~  167 (177)
T PRK08309        159 IKAIESDAD  167 (177)
T ss_pred             HHHHhcCCC
Confidence            999987664

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.26  E-value=7.4e-11  Score=101.63  Aligned_cols=180  Identities=17%  Similarity=0.094  Sum_probs=119.2

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      ++|+||.|+|++|.||+.++..|..++. .+++.+++.....+.+ .+.. .  .......+.+|+.++.+.++++|+||
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~-Dl~~-~--~~~~~v~~~td~~~~~~~l~gaDvVV   81 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAA-DLSH-I--DTPAKVTGYADGELWEKALRGADLVL   81 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCccccc-chhh-c--CcCceEEEecCCCchHHHhCCCCEEE
Confidence            4688999999999999999999986653 4788888832222111 1111 0  11223346666666567889999999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHH
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (307)
                      +++|....  ....+.+.+..|+..+.++++++++++.+++|+++|.......... ...+.+.....+      ...||
T Consensus        82 itaG~~~~--~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~-~~~~~~~sg~p~------~~viG  152 (321)
T PTZ00325         82 ICAGVPRK--PGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIA-AETLKKAGVYDP------RKLFG  152 (321)
T ss_pred             ECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH-HhhhhhccCCCh------hheee
Confidence            99998543  2245678999999999999999999999999999985431110000 000011111122      25677


Q ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCC
Q 021819          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (307)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~  200 (307)
                      .+-.-.-++-...++..+++...++ +.|+|....
T Consensus       153 ~g~LDs~R~r~~la~~l~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        153 VTTLDVVRARKFVAEALGMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             chhHHHHHHHHHHHHHhCcChhheE-EEEEeecCC
Confidence            7744444555566777899888888 778886544

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.15  E-value=9.4e-10  Score=88.63  Aligned_cols=181  Identities=20%  Similarity=0.198  Sum_probs=124.2

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCC----eEEEEeCCCCCCccc----ccCCCCCCCceEEEEcccCChhHHHHHhc--
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYT----SINATVFPGSDSSHL----FALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~----~V~~~~r~~~~~~~~----~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--   79 (307)
                      |.++|||++.+||.+||..|++....    .++...|+-++.+..    +...+.....+.++..|+++-.++.++.+  
T Consensus         4 KvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di   83 (341)
T KOG1478|consen    4 KVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDI   83 (341)
T ss_pred             eEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHH
Confidence            68999999999999999999987542    466677776665533    22222223378999999999877766654  


Q ss_pred             -----CccEEEEeccCCCCCC-------------------------------CCChhhhhhhhhHHHHHHHHHHHHhc--
Q 021819           80 -----GCKGVFHVASPCTLED-------------------------------PVDPEKELILPAVQGTLNVLEAAKRF--  121 (307)
Q Consensus        80 -----~~d~vi~~a~~~~~~~-------------------------------~~~~~~~~~~~n~~~~~~l~~~~~~~--  121 (307)
                           ..|.|+.|||.+..+.                               +.+.-.+.++.|+.|...+++.....  
T Consensus        84 ~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll~  163 (341)
T KOG1478|consen   84 KQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLLC  163 (341)
T ss_pred             HHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHhh
Confidence                 5799999999875321                               12334688999999999988877554  


Q ss_pred             --CCcEEEEecCcceeccCCCCCCcccccCCCCchhhhccc-CccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCcee
Q 021819          122 --GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR-KKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCL  195 (307)
Q Consensus       122 --~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~-~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~  195 (307)
                        ...++|.+||..+--.+-..            .+..-.+ ..+|..||++.+-+-.+..++.   |+.-.++.||...
T Consensus       164 ~~~~~~lvwtSS~~a~kk~lsl------------eD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~t  231 (341)
T KOG1478|consen  164 HSDNPQLVWTSSRMARKKNLSL------------EDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFT  231 (341)
T ss_pred             cCCCCeEEEEeecccccccCCH------------HHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceee
Confidence              22489999997653222111            1111111 2579999999997765554443   7788899999877


Q ss_pred             CCCCCCC
Q 021819          196 GPLMQPY  202 (307)
Q Consensus       196 g~~~~~~  202 (307)
                      +......
T Consensus       232 t~~~~~~  238 (341)
T KOG1478|consen  232 TNSFSEY  238 (341)
T ss_pred             cchhhhh
Confidence            6655443

>PLN00106 malate dehydrogenase

Probab=99.15  E-value=3.4e-10  Score=97.65  Aligned_cols=176  Identities=18%  Similarity=0.095  Sum_probs=119.9

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      .+||.|||++|.||+.++..|..++. .++..+++++.....+ .+...   .......++++.+++.+.++++|+|||+
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~-Dl~~~---~~~~~i~~~~~~~d~~~~l~~aDiVVit   93 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAA-DVSHI---NTPAQVRGFLGDDQLGDALKGADLVIIP   93 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEc-hhhhC---CcCceEEEEeCCCCHHHHcCCCCEEEEe
Confidence            46999999999999999999997764 4788888866222111 11110   1111223544555677889999999999


Q ss_pred             ccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHH
Q 021819           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (307)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (307)
                      ||.....  ...+.+.+..|.....++.+.+.+++...+|+++|-......+-. ...+......      .+...||.+
T Consensus        94 AG~~~~~--g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~-t~~~~~~s~~------p~~~viG~~  164 (323)
T PLN00106         94 AGVPRKP--GMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIA-AEVLKKAGVY------DPKKLFGVT  164 (323)
T ss_pred             CCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHH-HHHHHHcCCC------CcceEEEEe
Confidence            9985542  345788999999999999999999998899999985442100000 0001111111      123679999


Q ss_pred             HHHHHHHHHHHHHhcCCcEEEEecCceeCCC
Q 021819          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPL  198 (307)
Q Consensus       168 K~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~  198 (307)
                      +...+++-..++++.+++...++- .|+|..
T Consensus       165 ~LDs~Rl~~~lA~~lgv~~~~V~~-~ViGeH  194 (323)
T PLN00106        165 TLDVVRANTFVAEKKGLDPADVDV-PVVGGH  194 (323)
T ss_pred             cchHHHHHHHHHHHhCCChhheEE-EEEEeC
Confidence            988888888888899998888864 455543

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.12  E-value=3.8e-09  Score=91.96  Aligned_cols=174  Identities=16%  Similarity=0.110  Sum_probs=104.2

Q ss_pred             CcEEEEeCCchhhHHH--HHHHHHHCCCCeEEEEeCCCCCCc------------ccccCCCCCCCceEEEEcccCChhHH
Q 021819            9 EETVCVTGANGFIGTW--LVKTLLDNNYTSINATVFPGSDSS------------HLFALPGAGDANLRVFEADVLDSGAV   74 (307)
Q Consensus         9 ~~~ilItGatG~iG~~--l~~~L~~~g~~~V~~~~r~~~~~~------------~~~~~~~~~~~~~~~i~~D~~d~~~~   74 (307)
                      +|++|||||++++|.+  +++.| +.|+ .|+++.+......            .+..........+..+++|+++++++
T Consensus        41 gK~aLVTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v  118 (398)
T PRK13656         41 PKKVLVIGASSGYGLASRIAAAF-GAGA-DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIK  118 (398)
T ss_pred             CCEEEEECCCchHhHHHHHHHHH-HcCC-eEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence            5899999999999999  89999 9999 7777775321111            11111111111467889999999888


Q ss_pred             HHHhc-------CccEEEEeccCCCCCCCC------------------------------------ChhhhhhhhhHHHH
Q 021819           75 SRAVE-------GCKGVFHVASPCTLEDPV------------------------------------DPEKELILPAVQGT  111 (307)
Q Consensus        75 ~~~~~-------~~d~vi~~a~~~~~~~~~------------------------------------~~~~~~~~~n~~~~  111 (307)
                      .++++       ++|++||++|......+.                                    .+.+-...+++.|.
T Consensus       119 ~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~vMgg  198 (398)
T PRK13656        119 QKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKVMGG  198 (398)
T ss_pred             HHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHhhcc
Confidence            77765       579999999976332100                                    00001111223333


Q ss_pred             HH---HHHHHHhcC----CcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc--
Q 021819          112 LN---VLEAAKRFG----VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--  182 (307)
Q Consensus       112 ~~---l~~~~~~~~----~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--  182 (307)
                      .-   =+++....+    ..++|-.|..+.--..               |.|   ..+..|.+|...|..++.++.+.  
T Consensus       199 edw~~Wi~al~~a~lla~g~~~va~TY~G~~~t~---------------p~Y---~~g~mG~AKa~LE~~~r~La~~L~~  260 (398)
T PRK13656        199 EDWELWIDALDEAGVLAEGAKTVAYSYIGPELTH---------------PIY---WDGTIGKAKKDLDRTALALNEKLAA  260 (398)
T ss_pred             chHHHHHHHHHhcccccCCcEEEEEecCCcceee---------------ccc---CCchHHHHHHHHHHHHHHHHHHhhh
Confidence            11   111222221    1456666643321111               222   11468999999999888777654  


Q ss_pred             -CCcEEEEecCceeCCCCCCC
Q 021819          183 -GVDVVAIHPATCLGPLMQPY  202 (307)
Q Consensus       183 -~i~~~ivrp~~v~g~~~~~~  202 (307)
                       |++++++.++.+.+......
T Consensus       261 ~giran~i~~g~~~T~Ass~I  281 (398)
T PRK13656        261 KGGDAYVSVLKAVVTQASSAI  281 (398)
T ss_pred             cCCEEEEEecCcccchhhhcC
Confidence             88999999998877655444

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.99  E-value=2.4e-09  Score=93.64  Aligned_cols=99  Identities=23%  Similarity=0.315  Sum_probs=79.9

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      ||+|+|.|+ |+||+.++..|+++|..+|++.+|+..+...+......   +++.++.|+.|.+++.+++++.|+|||++
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~---~v~~~~vD~~d~~al~~li~~~d~VIn~~   76 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGG---KVEALQVDAADVDALVALIKDFDLVINAA   76 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccc---cceeEEecccChHHHHHHHhcCCEEEEeC
Confidence            569999998 99999999999999955999999987776665443211   68999999999999999999999999998


Q ss_pred             cCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEec
Q 021819           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (307)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iS  130 (307)
                      ....                  ..+++++|.+.|+. +|=+|
T Consensus        77 p~~~------------------~~~i~ka~i~~gv~-yvDts   99 (389)
T COG1748          77 PPFV------------------DLTILKACIKTGVD-YVDTS   99 (389)
T ss_pred             Cchh------------------hHHHHHHHHHhCCC-EEEcc
Confidence            7632                  23678888888753 55544

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.87  E-value=2.4e-08  Score=86.72  Aligned_cols=118  Identities=18%  Similarity=0.084  Sum_probs=79.0

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCC------eEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYT------SINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~------~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~   83 (307)
                      .+|+||||+|++|++++..|+..+..      +|+++++++... .+......-.+.......|+....++.+.++++|+
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~-~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDi   81 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALK-ALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDV   81 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccc-cccceeeehhhccccccCCceecCCHHHHhCCCCE
Confidence            47999999999999999999986531      799999865321 11111000000010222355445667788899999


Q ss_pred             EEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcC--CcEEEEec
Q 021819           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG--VRRVVVTS  130 (307)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~iS  130 (307)
                      |||+||.....  .....+.++.|+.....+.+.+.++.  -..+|.+|
T Consensus        82 VI~tAG~~~~~--~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvs  128 (325)
T cd01336          82 AILVGAMPRKE--GMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVG  128 (325)
T ss_pred             EEEeCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence            99999986542  23457899999999999999998884  23455555

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK09620 hypothetical protein; Provisional

Probab=98.78  E-value=2.7e-08  Score=81.86  Aligned_cols=81  Identities=14%  Similarity=0.132  Sum_probs=56.4

Q ss_pred             CCcEEEEeCCc----------------hhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCCh
Q 021819            8 EEETVCVTGAN----------------GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS   71 (307)
Q Consensus         8 ~~~~ilItGat----------------G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~   71 (307)
                      ++|+|+||+|.                ||+|++|++.|+++|+ +|+.+++.......  .... .. .+..+.+|....
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga-~V~li~g~~~~~~~--~~~~-~~-~~~~V~s~~d~~   76 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGA-HVIYLHGYFAEKPN--DINN-QL-ELHPFEGIIDLQ   76 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCC-eEEEEeCCCcCCCc--ccCC-ce-eEEEEecHHHHH
Confidence            47899999986                9999999999999999 89888763221110  0000 00 344566644344


Q ss_pred             hHHHHHhc--CccEEEEeccCCCC
Q 021819           72 GAVSRAVE--GCKGVFHVASPCTL   93 (307)
Q Consensus        72 ~~~~~~~~--~~d~vi~~a~~~~~   93 (307)
                      +.+.+++.  ++|+|||+||..+.
T Consensus        77 ~~l~~~~~~~~~D~VIH~AAvsD~  100 (229)
T PRK09620         77 DKMKSIITHEKVDAVIMAAAGSDW  100 (229)
T ss_pred             HHHHHHhcccCCCEEEECccccce
Confidence            57777774  68999999998765

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.76  E-value=1e-07  Score=82.60  Aligned_cols=170  Identities=16%  Similarity=0.120  Sum_probs=111.6

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCC-C-----eEEEEeCCCCC--Cccccc-CCCCC---CCceEEEEcccCChhHHHHH
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNY-T-----SINATVFPGSD--SSHLFA-LPGAG---DANLRVFEADVLDSGAVSRA   77 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~-~-----~V~~~~r~~~~--~~~~~~-~~~~~---~~~~~~i~~D~~d~~~~~~~   77 (307)
                      +||.|+|++|.+|+.++..|+..|. .     ++..++..+..  .+.... +....   ..+++     ++.  ...+.
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-----i~~--~~~~~   75 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIV-----ITD--DPNVA   75 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceE-----Eec--CcHHH
Confidence            5899999999999999999998875 4     68888884432  221111 11000   00111     221  12356


Q ss_pred             hcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCC-c-EEEEecCcceeccCCCCCCcccccCCCCchh
Q 021819           78 VEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV-R-RVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (307)
Q Consensus        78 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~-~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~  155 (307)
                      ++++|+||.+||.....  .....+.+..|+...+.+.+.+.+++- . .+|.+|- .. .-.    ...+-+...   .
T Consensus        76 ~~daDivvitaG~~~k~--g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsN-Pv-D~~----t~~~~k~sg---~  144 (322)
T cd01338          76 FKDADWALLVGAKPRGP--GMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGN-PC-NTN----ALIAMKNAP---D  144 (322)
T ss_pred             hCCCCEEEEeCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecC-cH-HHH----HHHHHHHcC---C
Confidence            78999999999985542  245678899999999999999988862 4 4444442 11 000    000001110   0


Q ss_pred             hhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCC
Q 021819          156 YCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLM  199 (307)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~  199 (307)
                        ..+...||.++...+++...+++..+++...+|...|+|+..
T Consensus       145 --~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG  186 (322)
T cd01338         145 --IPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHS  186 (322)
T ss_pred             --CChHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCc
Confidence              112257999999999999999999999999999989999874

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.76  E-value=5.5e-08  Score=80.35  Aligned_cols=69  Identities=16%  Similarity=0.264  Sum_probs=48.3

Q ss_pred             CCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCC--hhHHHHHhcCccEEEEeccCCC
Q 021819           16 GANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD--SGAVSRAVEGCKGVFHVASPCT   92 (307)
Q Consensus        16 GatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d--~~~~~~~~~~~d~vi~~a~~~~   92 (307)
                      .+|||+|++|+++|+++|+ +|+++.|.......    .   ..++.++.++-.+  .+.+.+.+.++|+|||+||...
T Consensus        23 ~SSG~iG~aLA~~L~~~G~-~V~li~r~~~~~~~----~---~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd   93 (229)
T PRK06732         23 HSTGQLGKIIAETFLAAGH-EVTLVTTKTAVKPE----P---HPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSD   93 (229)
T ss_pred             ccchHHHHHHHHHHHhCCC-EEEEEECcccccCC----C---CCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCC
Confidence            3489999999999999999 99998875322110    0   0156666654322  2456666778999999999865

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.69  E-value=1.8e-07  Score=78.23  Aligned_cols=96  Identities=18%  Similarity=0.144  Sum_probs=73.7

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEEEEe
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFHV   87 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~vi~~   87 (307)
                      |+|+|+||||. |+.|++.|.+.|+ +|++..++....+.+...      +...+..+..|.+++.+.++  ++|+||++
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~-~v~~s~~t~~~~~~~~~~------g~~~v~~g~l~~~~l~~~l~~~~i~~VIDA   72 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGI-EILVTVTTSEGKHLYPIH------QALTVHTGALDPQELREFLKRHSIDILVDA   72 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCC-eEEEEEccCCcccccccc------CCceEEECCCCHHHHHHHHHhcCCCEEEEc
Confidence            48999999999 9999999999998 999999877655444332      23345566678888888886  58999999


Q ss_pred             ccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEE
Q 021819           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV  128 (307)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  128 (307)
                      ++...               ...+.++.++|++.|+..+=|
T Consensus        73 tHPfA---------------~~is~~a~~a~~~~~ipylR~   98 (256)
T TIGR00715        73 THPFA---------------AQITTNATAVCKELGIPYVRF   98 (256)
T ss_pred             CCHHH---------------HHHHHHHHHHHHHhCCcEEEE
Confidence            76532               245788999999998875544

This enzyme was found to be a monomer by gel filtration.

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.65  E-value=7.7e-08  Score=86.29  Aligned_cols=97  Identities=23%  Similarity=0.263  Sum_probs=70.3

Q ss_pred             EEEeCCchhhHHHHHHHHHHCCCC-eEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEeccC
Q 021819           12 VCVTGANGFIGTWLVKTLLDNNYT-SINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASP   90 (307)
Q Consensus        12 ilItGatG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a~~   90 (307)
                      |+|.|| |++|+.+++.|.+.+.. +|++.+|+..+.+.+....  ...++..+++|+.|.+++.++++++|+||||++.
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp   77 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELLRGCDVVINCAGP   77 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSG
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHHhcCCEEEECCcc
Confidence            789999 99999999999999754 7999999877755544321  1118999999999999999999999999999887


Q ss_pred             CCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEec
Q 021819           91 CTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (307)
Q Consensus        91 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iS  130 (307)
                      ..                  ...++++|.+.|+ ++|-.|
T Consensus        78 ~~------------------~~~v~~~~i~~g~-~yvD~~   98 (386)
T PF03435_consen   78 FF------------------GEPVARACIEAGV-HYVDTS   98 (386)
T ss_dssp             GG------------------HHHHHHHHHHHT--EEEESS
T ss_pred             ch------------------hHHHHHHHHHhCC-Ceeccc
Confidence            41                  3357777877775 455533

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK05086 malate dehydrogenase; Provisional

Probab=98.62  E-value=6.3e-07  Score=77.56  Aligned_cols=118  Identities=15%  Similarity=0.061  Sum_probs=80.8

Q ss_pred             cEEEEeCCchhhHHHHHHHHHH-CCC-CeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819           10 ETVCVTGANGFIGTWLVKTLLD-NNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~-~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      |||+|+||+|.+|++++..|.. .+. +++++++|++........+... . ....+.+  .+.+++.+.++++|+||.+
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~-~-~~~~i~~--~~~~d~~~~l~~~DiVIit   76 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHI-P-TAVKIKG--FSGEDPTPALEGADVVLIS   76 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcC-C-CCceEEE--eCCCCHHHHcCCCCEEEEc
Confidence            4899999999999999998865 332 3778878764321100011110 0 1122333  2234455667899999999


Q ss_pred             ccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcc
Q 021819           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS  133 (307)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~  133 (307)
                      +|.....  .......+..|......+++.+.+++.+++|.+.|-.
T Consensus        77 aG~~~~~--~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsNP  120 (312)
T PRK05086         77 AGVARKP--GMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNP  120 (312)
T ss_pred             CCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCc
Confidence            9985542  2346788999999999999999999988899888743

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.54  E-value=1.4e-07  Score=76.15  Aligned_cols=82  Identities=17%  Similarity=0.093  Sum_probs=62.0

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      .++++++|+||+|.+|+.+++.|.+.|+ +|+.+.|+..+.+.+........ +.....+|..+.+++.+.++++|+||+
T Consensus        26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~diVi~  103 (194)
T cd01078          26 LKGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAIKGADVVFA  103 (194)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHHhcCCEEEE
Confidence            4568999999999999999999999998 99999987654443322111000 344556788898889899999999999


Q ss_pred             eccC
Q 021819           87 VASP   90 (307)
Q Consensus        87 ~a~~   90 (307)
                      +.+.
T Consensus       104 at~~  107 (194)
T cd01078         104 AGAA  107 (194)
T ss_pred             CCCC
Confidence            7654

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>cd00704 MDH Malate dehydrogenase

Probab=98.53  E-value=1.7e-06  Score=75.20  Aligned_cols=160  Identities=16%  Similarity=0.105  Sum_probs=97.0

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCC-C-----eEEEEeCCC--CCCcccccCCCCCCCceEEEEcccCCh-----------
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNY-T-----SINATVFPG--SDSSHLFALPGAGDANLRVFEADVLDS-----------   71 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~-~-----~V~~~~r~~--~~~~~~~~~~~~~~~~~~~i~~D~~d~-----------   71 (307)
                      ||.||||+|.+|+.++..|..+|. .     ++..+++++  +..+              ....|+.|.           
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~--------------g~~~Dl~d~~~~~~~~~~i~   67 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALE--------------GVVMELQDCAFPLLKGVVIT   67 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccc--------------eeeeehhhhcccccCCcEEe
Confidence            799999999999999999998764 2     388888865  2221              112222222           


Q ss_pred             hHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcC-Cc-EEEEecCcceeccCCCCCCcccccC
Q 021819           72 GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VR-RVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        72 ~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                      ....+.++++|+|||+||....+  .....+.+..|+...+.+.+.+.+++ -. .+|.+| -.. .-.    ....-+.
T Consensus        68 ~~~~~~~~~aDiVVitAG~~~~~--g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs-NPv-D~~----t~~~~k~  139 (323)
T cd00704          68 TDPEEAFKDVDVAILVGAFPRKP--GMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG-NPA-NTN----ALIALKN  139 (323)
T ss_pred             cChHHHhCCCCEEEEeCCCCCCc--CCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC-CcH-HHH----HHHHHHH
Confidence            23457788999999999986542  34567899999999999999998883 43 344444 211 000    0000011


Q ss_pred             CC-CchhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCC
Q 021819          150 SW-TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPL  198 (307)
Q Consensus       150 ~~-~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~  198 (307)
                      .. ..+.      ...+.+....-++-...++..+++...+.-..|+|..
T Consensus       140 sg~~p~~------~vig~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeH  183 (323)
T cd00704         140 APNLPPK------NFTALTRLDHNRAKAQVARKLGVRVSDVKNVIIWGNH  183 (323)
T ss_pred             cCCCCHH------HEEEeeHHHHHHHHHHHHHHhCcCHHHceeeeEEecc
Confidence            10 0111      2234454444444445555667766666555677754

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.43  E-value=2.4e-07  Score=80.24  Aligned_cols=74  Identities=23%  Similarity=0.181  Sum_probs=54.4

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHC-CCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      +++++|+||||+|+||+.++++|+++ |..+++.+.|+......+..         ++..+|+.   ++.+.+.++|+||
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~---------el~~~~i~---~l~~~l~~aDiVv  220 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQA---------ELGGGKIL---SLEEALPEADIVV  220 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHH---------HhccccHH---hHHHHHccCCEEE
Confidence            56789999999999999999999865 65588888886554443322         11123443   4667888999999


Q ss_pred             EeccCCC
Q 021819           86 HVASPCT   92 (307)
Q Consensus        86 ~~a~~~~   92 (307)
                      |+++...
T Consensus       221 ~~ts~~~  227 (340)
T PRK14982        221 WVASMPK  227 (340)
T ss_pred             ECCcCCc
Confidence            9998743

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.43  E-value=3.4e-06  Score=73.31  Aligned_cols=106  Identities=19%  Similarity=0.160  Sum_probs=74.2

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCC------eEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChh-----------H
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYT------SINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG-----------A   73 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~------~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~-----------~   73 (307)
                      +|.|+|++|.+|++++..|...+..      +++.+++.+....            .+....|+.|..           .
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~------------a~g~~~Dl~d~~~~~~~~~~~~~~   68 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKV------------LEGVVMELMDCAFPLLDGVVPTHD   68 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccc------------cceeEeehhcccchhcCceeccCC
Confidence            5899999999999999999986652      4888888544310            111122332222           3


Q ss_pred             HHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcC-Cc-EEEEec
Q 021819           74 VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VR-RVVVTS  130 (307)
Q Consensus        74 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~iS  130 (307)
                      ..+.++++|+||++||.....  ..++.+.+..|+...+.+.+.+.++. -. .+|.+|
T Consensus        69 ~~~~~~~aDiVVitAG~~~~~--~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvs  125 (324)
T TIGR01758        69 PAVAFTDVDVAILVGAFPRKE--GMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVG  125 (324)
T ss_pred             hHHHhCCCCEEEEcCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence            346778999999999985432  23468899999999999999999884 43 444444

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.41  E-value=1.1e-06  Score=78.37  Aligned_cols=75  Identities=17%  Similarity=0.125  Sum_probs=58.0

Q ss_pred             cCCcEEEEeCC----------------chhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCC
Q 021819            7 KEEETVCVTGA----------------NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD   70 (307)
Q Consensus         7 ~~~~~ilItGa----------------tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d   70 (307)
                      +++|+++||||                ||.+|.++++.|.++|+ +|+.+.++.+. .    .+   . +  ....|+++
T Consensus       186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga-~V~~v~~~~~~-~----~~---~-~--~~~~dv~~  253 (399)
T PRK05579        186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGA-DVTLVSGPVNL-P----TP---A-G--VKRIDVES  253 (399)
T ss_pred             cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCC-EEEEeCCCccc-c----CC---C-C--cEEEccCC
Confidence            45789999999                89999999999999999 89988875421 1    10   0 2  23578999


Q ss_pred             hhHHHHHhc----CccEEEEeccCCCC
Q 021819           71 SGAVSRAVE----GCKGVFHVASPCTL   93 (307)
Q Consensus        71 ~~~~~~~~~----~~d~vi~~a~~~~~   93 (307)
                      .+++.+.+.    ++|++||+||....
T Consensus       254 ~~~~~~~v~~~~~~~DilI~~Aav~d~  280 (399)
T PRK05579        254 AQEMLDAVLAALPQADIFIMAAAVADY  280 (399)
T ss_pred             HHHHHHHHHHhcCCCCEEEEccccccc
Confidence            887776663    68999999998654

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.40  E-value=4.1e-07  Score=77.18  Aligned_cols=81  Identities=14%  Similarity=0.279  Sum_probs=63.5

Q ss_pred             EEEEeCCchhhHHHHHHHHHH----CCCCeEEEEeCCCCCCccccc-CCCC----CCCceEEEEcccCChhHHHHHhcCc
Q 021819           11 TVCVTGANGFIGTWLVKTLLD----NNYTSINATVFPGSDSSHLFA-LPGA----GDANLRVFEADVLDSGAVSRAVEGC   81 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~----~g~~~V~~~~r~~~~~~~~~~-~~~~----~~~~~~~i~~D~~d~~~~~~~~~~~   81 (307)
                      -++|.|||||-|..+++.+.+    .+. .+-...|+..+.+...+ ....    -. ...++.+|.+|++++.+..+++
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~-slavAGRn~~KL~~vL~~~~~k~~~~ls-~~~i~i~D~~n~~Sl~emak~~   84 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGL-SLAVAGRNEKKLQEVLEKVGEKTGTDLS-SSVILIADSANEASLDEMAKQA   84 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCc-eEEEecCCHHHHHHHHHHHhhccCCCcc-cceEEEecCCCHHHHHHHHhhh
Confidence            589999999999999999998    566 77777888766543322 1111    12 2338889999999999999999


Q ss_pred             cEEEEeccCCCC
Q 021819           82 KGVFHVASPCTL   93 (307)
Q Consensus        82 d~vi~~a~~~~~   93 (307)
                      .+|+||+|....
T Consensus        85 ~vivN~vGPyR~   96 (423)
T KOG2733|consen   85 RVIVNCVGPYRF   96 (423)
T ss_pred             EEEEecccccee
Confidence            999999998875

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.36  E-value=9.5e-07  Score=75.77  Aligned_cols=83  Identities=11%  Similarity=0.015  Sum_probs=61.2

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC---CCCccccc-CCCCCCCceEEEEcccCChhHHHHHhcCcc
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG---SDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVEGCK   82 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~---~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d   82 (307)
                      .++++++|+|| |++|++++..|.+.|+.+|+++.|+.   ++.+.+.+ +..... .+.....|+.+.+++.+.++.+|
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~-~~~~~~~d~~~~~~~~~~~~~~D  201 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVP-ECIVNVYDLNDTEKLKAEIASSD  201 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCC-CceeEEechhhhhHHHhhhccCC
Confidence            34679999998 89999999999999996699999975   23322222 211111 34556688888888888888999


Q ss_pred             EEEEeccCC
Q 021819           83 GVFHVASPC   91 (307)
Q Consensus        83 ~vi~~a~~~   91 (307)
                      +|||+....
T Consensus       202 ilINaTp~G  210 (289)
T PRK12548        202 ILVNATLVG  210 (289)
T ss_pred             EEEEeCCCC
Confidence            999997653

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.30  E-value=1.6e-06  Score=71.59  Aligned_cols=68  Identities=10%  Similarity=0.132  Sum_probs=46.8

Q ss_pred             EEeCC-chhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHh-------cCccEE
Q 021819           13 CVTGA-NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV-------EGCKGV   84 (307)
Q Consensus        13 lItGa-tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~-------~~~d~v   84 (307)
                      +||.. ||+||+++++.|+++|+ +|+.+.+...    +...        ....+|+.+.+++.+++       ..+|++
T Consensus        18 ~itN~SSGgIG~AIA~~la~~Ga-~Vvlv~~~~~----l~~~--------~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiL   84 (227)
T TIGR02114        18 SITNHSTGHLGKIITETFLSAGH-EVTLVTTKRA----LKPE--------PHPNLSIREIETTKDLLITLKELVQEHDIL   84 (227)
T ss_pred             eecCCcccHHHHHHHHHHHHCCC-EEEEEcChhh----cccc--------cCCcceeecHHHHHHHHHHHHHHcCCCCEE
Confidence            44444 89999999999999999 8887765311    1000        01246888776666554       358999


Q ss_pred             EEeccCCCC
Q 021819           85 FHVASPCTL   93 (307)
Q Consensus        85 i~~a~~~~~   93 (307)
                      ||+||....
T Consensus        85 VnnAgv~d~   93 (227)
T TIGR02114        85 IHSMAVSDY   93 (227)
T ss_pred             EECCEeccc
Confidence            999997543

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.08  E-value=6.4e-06  Score=79.62  Aligned_cols=163  Identities=19%  Similarity=0.191  Sum_probs=113.7

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccc----ccCCCCCCCceEEEEcccCChhHHHHHhcC---
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL----FALPGAGDANLRVFEADVLDSGAVSRAVEG---   80 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~----~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~---   80 (307)
                      ..|.++|+||-|+.|..|++.|..+|...++...|+.-+...-    ..+...+- .+.+-.-|++..+....+++.   
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GV-qV~vsT~nitt~~ga~~Li~~s~k 1845 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGV-QVQVSTSNITTAEGARGLIEESNK 1845 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCe-EEEEecccchhhhhHHHHHHHhhh
Confidence            3579999999999999999999999997788888876554321    11222211 333444677776666667653   


Q ss_pred             ---ccEEEEeccCCCCCCCCCh----hhhhhhhhHHHHHHHHHHHHhcC--CcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           81 ---CKGVFHVASPCTLEDPVDP----EKELILPAVQGTLNVLEAAKRFG--VRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        81 ---~d~vi~~a~~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                         +-.|||+|+.......++.    ..+.-+.-+.||.+|=+..++..  .+.||.+||.+.--++.+.          
T Consensus      1846 l~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~GQ---------- 1915 (2376)
T KOG1202|consen 1846 LGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNAGQ---------- 1915 (2376)
T ss_pred             cccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCCcc----------
Confidence               4789999987665333332    34444455788999888888874  5789999997765555553          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecC
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPA  192 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~  192 (307)
                                +.||.+....|+++++..+ +|++-+.|.=|
T Consensus      1916 ----------tNYG~aNS~MERiceqRr~-~GfPG~AiQWG 1945 (2376)
T KOG1202|consen 1916 ----------TNYGLANSAMERICEQRRH-EGFPGTAIQWG 1945 (2376)
T ss_pred             ----------cccchhhHHHHHHHHHhhh-cCCCcceeeee
Confidence                      5699999999999986543 47766666544

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.08  E-value=1.6e-05  Score=70.71  Aligned_cols=103  Identities=13%  Similarity=0.117  Sum_probs=69.7

Q ss_pred             cCCcEEEEeCC----------------chhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCC
Q 021819            7 KEEETVCVTGA----------------NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD   70 (307)
Q Consensus         7 ~~~~~ilItGa----------------tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d   70 (307)
                      +++++++||||                ||.+|.++++.|..+|+ +|+.+.++....     .+.    .+  ...|+++
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga-~V~~~~g~~~~~-----~~~----~~--~~~~v~~  250 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGA-DVTLITGPVSLL-----TPP----GV--KSIKVST  250 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCC-EEEEeCCCCccC-----CCC----Cc--EEEEecc
Confidence            45789999999                35799999999999999 888877654321     100    22  3478888


Q ss_pred             hhHH-HHHh----cCccEEEEeccCCCCCCCCC---hh---hhhhhhhHHHHHHHHHHHHhc
Q 021819           71 SGAV-SRAV----EGCKGVFHVASPCTLEDPVD---PE---KELILPAVQGTLNVLEAAKRF  121 (307)
Q Consensus        71 ~~~~-~~~~----~~~d~vi~~a~~~~~~~~~~---~~---~~~~~~n~~~~~~l~~~~~~~  121 (307)
                      .+++ +.++    .++|++|++||.........   ..   ...+.+|+.-+--+++..++.
T Consensus       251 ~~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~  312 (390)
T TIGR00521       251 AEEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKI  312 (390)
T ss_pred             HHHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhh
Confidence            8777 4444    36899999999876522111   11   123446667777777777654

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.07  E-value=1.1e-05  Score=61.47  Aligned_cols=114  Identities=16%  Similarity=0.086  Sum_probs=75.1

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCccccc-CCCC-CCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFA-LPGA-GDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      +||.|+|++|.+|++++..|..++. .+++.++++....+.... +... ........... .++    +.++++|+||-
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~-~~~----~~~~~aDivvi   75 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS-GDY----EALKDADIVVI   75 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE-SSG----GGGTTESEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc-ccc----cccccccEEEE
Confidence            4899999999999999999999975 579999887543321110 0000 00011111111 233    34679999999


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEec
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTS  130 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~iS  130 (307)
                      +||.....  .....+.++.|....+.+.+.+.+.+-. .++.+|
T Consensus        76 tag~~~~~--g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   76 TAGVPRKP--GMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             TTSTSSST--TSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred             eccccccc--cccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence            99975432  2456788999999999999999888643 455544

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.07  E-value=1.4e-06  Score=65.86  Aligned_cols=78  Identities=15%  Similarity=0.116  Sum_probs=57.3

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      +.++++++|.|+ |+.|+.++..|.+.|..+|+.+.|+.++.+.+.....  ...+.++..     +++.+.+.++|+||
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~--~~~~~~~~~-----~~~~~~~~~~DivI   80 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG--GVNIEAIPL-----EDLEEALQEADIVI   80 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT--GCSEEEEEG-----GGHCHHHHTESEEE
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC--ccccceeeH-----HHHHHHHhhCCeEE
Confidence            567899999996 8999999999999999779999998776655543221  003444432     34557788999999


Q ss_pred             EeccCC
Q 021819           86 HVASPC   91 (307)
Q Consensus        86 ~~a~~~   91 (307)
                      ++.+..
T Consensus        81 ~aT~~~   86 (135)
T PF01488_consen   81 NATPSG   86 (135)
T ss_dssp             E-SSTT
T ss_pred             EecCCC
Confidence            997754

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=98.06  E-value=9.2e-05  Score=64.27  Aligned_cols=117  Identities=12%  Similarity=0.107  Sum_probs=79.7

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcccccCCCCC---CCceEEEEcccCChhHHHHHhc
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAG---DANLRVFEADVLDSGAVSRAVE   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~i~~D~~d~~~~~~~~~   79 (307)
                      |+++..+||.|+|+ |.+|+.++-.|+.+|. .++..++++.+..+.........   ..++... .  .+   . +.++
T Consensus         1 ~~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~---~-~~~~   72 (315)
T PRK00066          1 MMKKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GD---Y-SDCK   72 (315)
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CC---H-HHhC
Confidence            56677889999998 9999999999998886 47999998665543221111000   0022222 1  12   2 3468


Q ss_pred             CccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEec
Q 021819           80 GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTS  130 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~iS  130 (307)
                      ++|+||.+||.....  .....+.+..|....+.+++.+.+++.. .++.+|
T Consensus        73 ~adivIitag~~~k~--g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         73 DADLVVITAGAPQKP--GETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             CCCEEEEecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            999999999985442  2345788999999999999999888644 344444

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=98.03  E-value=0.00012  Score=63.11  Aligned_cols=175  Identities=17%  Similarity=0.096  Sum_probs=98.6

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      +||.|+|++|.+|++++..|..++. .+++.++.+......+ .+..... .... .+ ....+++.+.++++|+||-+|
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~al-DL~~~~~-~~~i-~~-~~~~~~~y~~~~daDivvita   76 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAA-DLSHINT-PAKV-TG-YLGPEELKKALKGADVVVIPA   76 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeeh-HhHhCCC-cceE-EE-ecCCCchHHhcCCCCEEEEeC
Confidence            4899999999999999999998884 4788888761111111 1111000 1111 11 101123556789999999999


Q ss_pred             cCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHH
Q 021819           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (307)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (307)
                      |.....  -....+.++.|......+.+...+++-..++.+-|-.. .-.    ...+++--+....++.  ....|.+-
T Consensus        77 G~~~k~--g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtNPv-Dv~----~~i~t~~~~~~s~~p~--~rviG~~~  147 (310)
T cd01337          77 GVPRKP--GMTRDDLFNINAGIVRDLATAVAKACPKALILIISNPV-NST----VPIAAEVLKKAGVYDP--KRLFGVTT  147 (310)
T ss_pred             CCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCch-hhH----HHHHHHHHHHhcCCCH--HHEEeeec
Confidence            985432  34568999999999999999999887444444333221 000    0000100000000000  02333333


Q ss_pred             HHHHHHHHHHHHhcCCcEEEEecCceeCCC
Q 021819          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPL  198 (307)
Q Consensus       169 ~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~  198 (307)
                      .-.-++-...++..+++..-++ +.|+|..
T Consensus       148 LDs~R~~~~la~~l~v~~~~V~-~~v~GeH  176 (310)
T cd01337         148 LDVVRANTFVAELLGLDPAKVN-VPVIGGH  176 (310)
T ss_pred             hHHHHHHHHHHHHhCcCHHHEE-EEEEecC
Confidence            3333444445556788777777 7788865

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.03  E-value=0.00023  Score=65.01  Aligned_cols=203  Identities=19%  Similarity=0.119  Sum_probs=119.7

Q ss_pred             CCcEEEEeCC-chhhHHHHHHHHHHCCCCeEEEEeCCCCC--CcccccC---CCCCCCceEEEEcccCChhHHHHHhc--
Q 021819            8 EEETVCVTGA-NGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFAL---PGAGDANLRVFEADVLDSGAVSRAVE--   79 (307)
Q Consensus         8 ~~~~ilItGa-tG~iG~~l~~~L~~~g~~~V~~~~r~~~~--~~~~~~~---~~~~~~~~~~i~~D~~d~~~~~~~~~--   79 (307)
                      ..+.++|||| -|.||.+++..|++.|. .|+++..+-++  .+....+   .......+-++..++.++.++..+++  
T Consensus       395 ~d~valVTGA~~gSIaa~Vv~~LL~gGA-tVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewI  473 (866)
T COG4982         395 GDKVALVTGASKGSIAAAVVARLLAGGA-TVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWI  473 (866)
T ss_pred             ccceEEEecCCCcchHHHHHHHHHhCCc-EEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHh
Confidence            4578999999 58999999999999999 77776553322  2333322   11112245667888888777776664  


Q ss_pred             -------------------CccEEEEeccCCCCCCCCC-h--hhhhhhhhHHHHHHHHHHHHhcCCc-------EEEEec
Q 021819           80 -------------------GCKGVFHVASPCTLEDPVD-P--EKELILPAVQGTLNVLEAAKRFGVR-------RVVVTS  130 (307)
Q Consensus        80 -------------------~~d~vi~~a~~~~~~~~~~-~--~~~~~~~n~~~~~~l~~~~~~~~~~-------~~v~iS  130 (307)
                                         ..|.+|-+|++.-.+...+ .  .+-.+++-+...++++-.+.+++..       ++|.-.
T Consensus       474 g~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPg  553 (866)
T COG4982         474 GDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPG  553 (866)
T ss_pred             ccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecC
Confidence                               1378888888654321111 1  2344555566777887777766422       344444


Q ss_pred             CcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhcC----CcEEEEecCceeCCCCCCCCcch
Q 021819          131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG----VDVVAIHPATCLGPLMQPYLNAS  206 (307)
Q Consensus       131 S~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~----i~~~ivrp~~v~g~~~~~~~~~~  206 (307)
                      | ...+...+.                    +.|+.+|...|.++.+|+.+++    +.++-.+.|.+-|-+.-+....+
T Consensus       554 S-PNrG~FGgD--------------------GaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGLMg~Ndii  612 (866)
T COG4982         554 S-PNRGMFGGD--------------------GAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGLMGHNDII  612 (866)
T ss_pred             C-CCCCccCCC--------------------cchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccccCCcchh
Confidence            4 111111111                    5799999999999999987763    33333445555454433322333


Q ss_pred             HHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhc
Q 021819          207 CAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE  243 (307)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~  243 (307)
                      ..-+.+.           -...-+.+++|.-++-++.
T Consensus       613 v~aiEk~-----------GV~tyS~~EmA~~LLgL~s  638 (866)
T COG4982         613 VAAIEKA-----------GVRTYSTDEMAFNLLGLAS  638 (866)
T ss_pred             HHHHHHh-----------CceecCHHHHHHHHHhhcc
Confidence            3333221           1222366777777665554

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=98.02  E-value=2.4e-05  Score=62.20  Aligned_cols=76  Identities=14%  Similarity=0.202  Sum_probs=47.2

Q ss_pred             CCcEEEEeCC----------------chhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCCh
Q 021819            8 EEETVCVTGA----------------NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS   71 (307)
Q Consensus         8 ~~~~ilItGa----------------tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~   71 (307)
                      ++|+||||+|                ||-.|.+|++.+..+|+ +|+.+..... ...        +.+++.+...-.++
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga-~V~li~g~~~-~~~--------p~~~~~i~v~sa~e   71 (185)
T PF04127_consen    2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGA-EVTLIHGPSS-LPP--------PPGVKVIRVESAEE   71 (185)
T ss_dssp             TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT--EEEEEE-TTS-------------TTEEEEE-SSHHH
T ss_pred             CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCC-EEEEEecCcc-ccc--------cccceEEEecchhh
Confidence            5778888876                68999999999999999 8888876532 111        11666666442221


Q ss_pred             --hHHHHHhcCccEEEEeccCCCC
Q 021819           72 --GAVSRAVEGCKGVFHVASPCTL   93 (307)
Q Consensus        72 --~~~~~~~~~~d~vi~~a~~~~~   93 (307)
                        +.+.+.++++|++||+|++.+.
T Consensus        72 m~~~~~~~~~~~Di~I~aAAVsDf   95 (185)
T PF04127_consen   72 MLEAVKELLPSADIIIMAAAVSDF   95 (185)
T ss_dssp             HHHHHHHHGGGGSEEEE-SB--SE
T ss_pred             hhhhhccccCcceeEEEecchhhe
Confidence              3344555678999999999775

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=98.02  E-value=0.0025  Score=48.49  Aligned_cols=186  Identities=16%  Similarity=0.187  Sum_probs=105.1

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccC---ChhHHHH----Hh--cC
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL---DSGAVSR----AV--EG   80 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~---d~~~~~~----~~--~~   80 (307)
                      .+|+|-||-|-+|+++++.+..+++ -|..++....+....          -.++.+|-.   +++++.+    .+  ++
T Consensus         4 grVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe~Ad~----------sI~V~~~~swtEQe~~v~~~vg~sL~gek   72 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENEQADS----------SILVDGNKSWTEQEQSVLEQVGSSLQGEK   72 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeecccccccc----------eEEecCCcchhHHHHHHHHHHHHhhcccc
Confidence            4899999999999999999999999 787777654332211          122333321   2232222    22  26


Q ss_pred             ccEEEEeccCCCCCC-CCChh----hhhhhhhHHHHHHHHHHHHhc-CCcEEEEecCc-ceeccCCCCCCcccccCCCCc
Q 021819           81 CKGVFHVASPCTLED-PVDPE----KELILPAVQGTLNVLEAAKRF-GVRRVVVTSSI-SAIVPNPGWKGKVFDETSWTD  153 (307)
Q Consensus        81 ~d~vi~~a~~~~~~~-~~~~~----~~~~~~n~~~~~~l~~~~~~~-~~~~~v~iSS~-~~~~~~~~~~~~~~~E~~~~~  153 (307)
                      +|.||..||...... ...+.    ..+++-.+.....-.+.+.++ .-+-++.+... .+..+.++.            
T Consensus        73 vDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTPgM------------  140 (236)
T KOG4022|consen   73 VDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGTPGM------------  140 (236)
T ss_pred             cceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCCCcc------------
Confidence            899999998655421 11111    222222233332222233222 11224444432 333333332            


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHh-cCCc----EEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCc
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK-HGVD----VVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~-~~i~----~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (307)
                              -.||..|.+.+++.+.++.+ +|++    ...|-|-...+|..+.+....                 ..-+|
T Consensus       141 --------IGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~A-----------------DfssW  195 (236)
T KOG4022|consen  141 --------IGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNA-----------------DFSSW  195 (236)
T ss_pred             --------cchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCC-----------------cccCc
Confidence                    46999999999999988655 4554    445556666666544332111                 35567


Q ss_pred             ccHHHHHHHHHHhhc
Q 021819          229 VPVKDVAKAQVLLFE  243 (307)
Q Consensus       229 i~~~dva~~~~~~~~  243 (307)
                      .+...+++.++.-..
T Consensus       196 TPL~fi~e~flkWtt  210 (236)
T KOG4022|consen  196 TPLSFISEHFLKWTT  210 (236)
T ss_pred             ccHHHHHHHHHHHhc
Confidence            888888888766553

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=98.01  E-value=1e-05  Score=68.30  Aligned_cols=79  Identities=18%  Similarity=0.183  Sum_probs=60.5

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      ..-++|-||+||.|.-++++|.++|. .-....|+..+...+......   ....  .++-+++.+++.+++.++|+||+
T Consensus         6 e~d~iiYGAtGy~G~lvae~l~~~g~-~~aLAgRs~~kl~~l~~~LG~---~~~~--~p~~~p~~~~~~~~~~~VVlncv   79 (382)
T COG3268           6 EYDIIIYGATGYAGGLVAEYLAREGL-TAALAGRSSAKLDALRASLGP---EAAV--FPLGVPAALEAMASRTQVVLNCV   79 (382)
T ss_pred             ceeEEEEccccchhHHHHHHHHHcCC-chhhccCCHHHHHHHHHhcCc---cccc--cCCCCHHHHHHHHhcceEEEecc
Confidence            35799999999999999999999998 556667877776655443221   2333  34445889999999999999999


Q ss_pred             cCCCC
Q 021819           89 SPCTL   93 (307)
Q Consensus        89 ~~~~~   93 (307)
                      |.+..
T Consensus        80 GPyt~   84 (382)
T COG3268          80 GPYTR   84 (382)
T ss_pred             ccccc
Confidence            98764

>PRK05442 malate dehydrogenase; Provisional

Probab=98.00  E-value=0.00012  Score=63.68  Aligned_cols=171  Identities=18%  Similarity=0.133  Sum_probs=99.5

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCC-C-----eEEEEeCCCCC--Ccccc-cCCCCC---CCceEEEEcccCChhHHH
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNY-T-----SINATVFPGSD--SSHLF-ALPGAG---DANLRVFEADVLDSGAVS   75 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~-~-----~V~~~~r~~~~--~~~~~-~~~~~~---~~~~~~i~~D~~d~~~~~   75 (307)
                      +++||.|+|++|.+|+.++..|...+. .     ++..++.++..  ..... .+....   ..++     .++.  ...
T Consensus         3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~-----~i~~--~~y   75 (326)
T PRK05442          3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGV-----VITD--DPN   75 (326)
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCc-----EEec--ChH
Confidence            456999999999999999999988764 4     68888875432  11111 010000   0011     1121  223


Q ss_pred             HHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcC--CcEEEEecCcceeccCCCCCCcccccCCCCc
Q 021819           76 RAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG--VRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (307)
Q Consensus        76 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~  153 (307)
                      +.++++|+||-+||.....  -.+..+.+..|....+.+.+.+.++.  -..++.+|- .. .-.    ....-+..   
T Consensus        76 ~~~~daDiVVitaG~~~k~--g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsN-Pv-Dv~----t~v~~k~s---  144 (326)
T PRK05442         76 VAFKDADVALLVGARPRGP--GMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGN-PA-NTN----ALIAMKNA---  144 (326)
T ss_pred             HHhCCCCEEEEeCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCC-ch-HHH----HHHHHHHc---
Confidence            5678999999999975432  34567899999999999999999854  344555552 11 000    00000000   


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCC
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPL  198 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~  198 (307)
                      |.++  +....|.+-...-++-...++..+++...++.-.|+|..
T Consensus       145 ~g~p--~~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~vV~GeH  187 (326)
T PRK05442        145 PDLP--AENFTAMTRLDHNRALSQLAAKAGVPVADIKKMTVWGNH  187 (326)
T ss_pred             CCCC--HHHEEeeeHHHHHHHHHHHHHHhCcChHHeEEeEEEECC
Confidence            0010  112344444444455555566778887777766667754

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.95  E-value=5.4e-05  Score=62.41  Aligned_cols=75  Identities=15%  Similarity=0.205  Sum_probs=60.0

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHH-hcCccEEEEec
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHVA   88 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~d~vi~~a   88 (307)
                      |+++|.|+ |-+|+.+++.|.+.|+ +|+++++++..........   . ..+.+.+|-+|++.++++ +.++|+++=+.
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~---~-~~~~v~gd~t~~~~L~~agi~~aD~vva~t   74 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADE---L-DTHVVIGDATDEDVLEEAGIDDADAVVAAT   74 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhh---c-ceEEEEecCCCHHHHHhcCCCcCCEEEEee
Confidence            47888884 9999999999999999 8999998776654422200   0 688999999999999998 78999998875


Q ss_pred             cC
Q 021819           89 SP   90 (307)
Q Consensus        89 ~~   90 (307)
                      +.
T Consensus        75 ~~   76 (225)
T COG0569          75 GN   76 (225)
T ss_pred             CC
Confidence            43

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.93  E-value=3.3e-05  Score=76.17  Aligned_cols=79  Identities=19%  Similarity=0.156  Sum_probs=59.5

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCe-------------EEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhH
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTS-------------INATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA   73 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~   73 (307)
                      .+|++|+|.|+ |++|+..++.|.+....+             |.+.+++....+.+....   . ++..++.|+.|.++
T Consensus       567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~---~-~~~~v~lDv~D~e~  641 (1042)
T PLN02819        567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI---E-NAEAVQLDVSDSES  641 (1042)
T ss_pred             ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc---C-CCceEEeecCCHHH
Confidence            35789999996 999999999998763213             666666554444433211   1 56788999999999


Q ss_pred             HHHHhcCccEEEEeccC
Q 021819           74 VSRAVEGCKGVFHVASP   90 (307)
Q Consensus        74 ~~~~~~~~d~vi~~a~~   90 (307)
                      +.++++++|+||++...
T Consensus       642 L~~~v~~~DaVIsalP~  658 (1042)
T PLN02819        642 LLKYVSQVDVVISLLPA  658 (1042)
T ss_pred             HHHhhcCCCEEEECCCc
Confidence            99999999999999764

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.92  E-value=0.00014  Score=63.17  Aligned_cols=172  Identities=16%  Similarity=0.104  Sum_probs=101.0

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCC-C-----eEEEEeCCCCC--Cccccc-CCCCC---CCceEEEEcccCChhHHHH
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNY-T-----SINATVFPGSD--SSHLFA-LPGAG---DANLRVFEADVLDSGAVSR   76 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~-~-----~V~~~~r~~~~--~~~~~~-~~~~~---~~~~~~i~~D~~d~~~~~~   76 (307)
                      -.||.|+|++|++|++++..|..++. .     +++.++..+..  ...... +....   ..+++     ++  ....+
T Consensus         3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-----i~--~~~~~   75 (323)
T TIGR01759         3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVV-----AT--TDPEE   75 (323)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcE-----Ee--cChHH
Confidence            35899999999999999999998874 4     68888875422  221110 10000   00111     11  12235


Q ss_pred             HhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCC-cEEEEecCcceeccCCCCCCcccccCCCCchh
Q 021819           77 AVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV-RRVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (307)
Q Consensus        77 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~  155 (307)
                      .++++|+||.+||.....  -.+..+.+..|....+.+.+.+.+++- ..++.+-|-.. .-.    ....-+..+   .
T Consensus        76 ~~~daDvVVitAG~~~k~--g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPv-Dv~----t~v~~k~s~---g  145 (323)
T TIGR01759        76 AFKDVDAALLVGAFPRKP--GMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPA-NTN----ALIASKNAP---D  145 (323)
T ss_pred             HhCCCCEEEEeCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcH-HHH----HHHHHHHcC---C
Confidence            678999999999975432  345678999999999999999998864 44444444211 000    000001100   0


Q ss_pred             hhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCC
Q 021819          156 YCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLM  199 (307)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~  199 (307)
                      ++  +....|.+....-++-...++..+++...++-..|+|...
T Consensus       146 ~p--~~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG  187 (323)
T TIGR01759       146 IP--PKNFSAMTRLDHNRAKYQLAAKAGVPVSDVKNVIIWGNHS  187 (323)
T ss_pred             CC--HHHEEEeeHHHHHHHHHHHHHHhCcChHHeEEeEEEecCC
Confidence            10  1123444555544555555667788888777677777543

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.92  E-value=0.0001  Score=63.89  Aligned_cols=116  Identities=18%  Similarity=0.137  Sum_probs=73.6

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCC--CCCcccccCCCCC--CCceEEEEcccCChhHHHHHhcCccEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPG--SDSSHLFALPGAG--DANLRVFEADVLDSGAVSRAVEGCKGV   84 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~--~~~~~~~~~~~~~--~~~~~~i~~D~~d~~~~~~~~~~~d~v   84 (307)
                      |+|.|+|++|.+|..++..|+..|. .+|++++|..  +..+.......+.  ..... .....++  +.. .++++|+|
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~-~~i~~~~--d~~-~l~~aDiV   76 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGID-AEIKISS--DLS-DVAGSDIV   76 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCC-cEEEECC--CHH-HhCCCCEE
Confidence            4899999999999999999999986 3699999843  2221111000000  00000 0111111  122 48899999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCC-cEEEEecC
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV-RRVVVTSS  131 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~iSS  131 (307)
                      |-++|.....  ..+..+.+..|..-.+.+++.+.+.+- ..+|.+++
T Consensus        77 iitag~p~~~--~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n  122 (309)
T cd05294          77 IITAGVPRKE--GMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN  122 (309)
T ss_pred             EEecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            9999875432  223467888999999999998877753 35666665

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.92  E-value=4.3e-05  Score=67.90  Aligned_cols=101  Identities=17%  Similarity=0.167  Sum_probs=63.5

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHH-HhcCccEEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSR-AVEGCKGVFH   86 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~-~~~~~d~vi~   86 (307)
                      ++++|.|.||||++|+.|++.|.+....+|..+.++....+.+...      .......|+.+.++++. .++++|+||-
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~------~~~l~~~~~~~~~~~~~~~~~~~DvVf~  110 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSV------FPHLITQDLPNLVAVKDADFSDVDAVFC  110 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhh------CccccCccccceecCCHHHhcCCCEEEE
Confidence            3569999999999999999999998544888888754332222111      11122234332222222 2478999999


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcce
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISA  134 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~  134 (307)
                      +.+..                  .+..++..+ +.| .++|-.||...
T Consensus       111 Alp~~------------------~s~~i~~~~-~~g-~~VIDlSs~fR  138 (381)
T PLN02968        111 CLPHG------------------TTQEIIKAL-PKD-LKIVDLSADFR  138 (381)
T ss_pred             cCCHH------------------HHHHHHHHH-hCC-CEEEEcCchhc
Confidence            75431                  355666665 345 57999998553

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.82  E-value=0.00025  Score=60.71  Aligned_cols=117  Identities=14%  Similarity=0.103  Sum_probs=77.1

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCC-eEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYT-SINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      +||.|+|+ |+||+.++-.|+.++.. +++.++......+-......... -.......+..... .+.++++|+|+-+|
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~-~~~~~~~~i~~~~~-y~~~~~aDiVvitA   77 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAA-APLGSDVKITGDGD-YEDLKGADIVVITA   77 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcc-hhccCceEEecCCC-hhhhcCCCEEEEeC
Confidence            48999999 99999999999888765 89999887433322111100000 00001122222111 35578999999999


Q ss_pred             cCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      |....+.  ....+.++.|......+.+...+.+-.-++.+-|
T Consensus        78 G~prKpG--mtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvt  118 (313)
T COG0039          78 GVPRKPG--MTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVT  118 (313)
T ss_pred             CCCCCCC--CCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEec
Confidence            8765533  3457899999999999999998887555555554

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.80  E-value=0.00048  Score=59.55  Aligned_cols=115  Identities=17%  Similarity=0.090  Sum_probs=76.4

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEecc
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a~   89 (307)
                      ||.|+|++|.+|++++..|..++. .+++.+++++.....+ .+.. ......+...  ++.+++.+.++++|+||-+||
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~-DL~~-~~~~~~i~~~--~~~~~~~~~~~daDivvitaG   76 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAA-DLSH-IPTAASVKGF--SGEEGLENALKGADVVVIPAG   76 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEc-hhhc-CCcCceEEEe--cCCCchHHHcCCCCEEEEeCC
Confidence            589999999999999999988875 5788888866222111 1111 1001111110  111234567899999999999


Q ss_pred             CCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      .....  .....+.+..|..-.+.+.+.+.+++-..++.+-|
T Consensus        77 ~~~~~--g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvs  116 (312)
T TIGR01772        77 VPRKP--GMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVIT  116 (312)
T ss_pred             CCCCC--CccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEec
Confidence            75442  34567899999999999999998887444444443

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.80  E-value=9.9e-05  Score=67.75  Aligned_cols=72  Identities=18%  Similarity=0.226  Sum_probs=59.7

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHH-hcCccEEEEe
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHV   87 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~d~vi~~   87 (307)
                      |+|+|+|+ |.+|+++++.|.++|+ +|+++++++...+.+.. .      ++.++.+|.++.+.++++ +.++|.||-+
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~-~v~vid~~~~~~~~~~~~~------~~~~~~gd~~~~~~l~~~~~~~a~~vi~~   72 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENN-DVTVIDTDEERLRRLQDRL------DVRTVVGNGSSPDVLREAGAEDADLLIAV   72 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhhc------CEEEEEeCCCCHHHHHHcCCCcCCEEEEe
Confidence            37999997 9999999999999999 89999887665544432 2      688999999999999888 7899999887


Q ss_pred             cc
Q 021819           88 AS   89 (307)
Q Consensus        88 a~   89 (307)
                      ..
T Consensus        73 ~~   74 (453)
T PRK09496         73 TD   74 (453)
T ss_pred             cC
Confidence            53

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.78  E-value=0.00017  Score=62.71  Aligned_cols=118  Identities=15%  Similarity=0.121  Sum_probs=75.5

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCc--ccccC--CCCCCCceEEEEcccCChhHHHHHhcCc
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS--HLFAL--PGAGDANLRVFEADVLDSGAVSRAVEGC   81 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~--~~~~~~~~~~i~~D~~d~~~~~~~~~~~   81 (307)
                      +.+.+||.|+| +|.+|+.++..|+..|..+|+.++.+++...  .+...  ........++..  .+|   . +.++++
T Consensus         3 ~~~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d---~-~~l~~a   75 (321)
T PTZ00082          3 MIKRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNN---Y-EDIAGS   75 (321)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCC---H-HHhCCC
Confidence            34457999999 5999999999999999647888888766432  11100  000000122221  123   2 356899


Q ss_pred             cEEEEeccCCCCCCCCC---hhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEec
Q 021819           82 KGVFHVASPCTLEDPVD---PEKELILPAVQGTLNVLEAAKRFGVR-RVVVTS  130 (307)
Q Consensus        82 d~vi~~a~~~~~~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~iS  130 (307)
                      |+||.+++........+   ...+.+..|+...+.+.+.+.+.+-+ .++.+|
T Consensus        76 DiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~s  128 (321)
T PTZ00082         76 DVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVIT  128 (321)
T ss_pred             CEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            99999998754322111   44667788888888899888888644 466655

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.78  E-value=0.00019  Score=62.92  Aligned_cols=93  Identities=19%  Similarity=0.190  Sum_probs=58.4

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCC--CeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNY--TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      |++|+|.||||++|+.|++.|.++++  .++..+.+.....+.+. +.     +......|+.+.     .++++|+||-
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~-~~-----g~~i~v~d~~~~-----~~~~vDvVf~   69 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELS-FK-----GKELKVEDLTTF-----DFSGVDIALF   69 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeee-eC-----CceeEEeeCCHH-----HHcCCCEEEE
Confidence            45899999999999999999999776  24567766544333322 11     223333455432     2368999998


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      +++..                  .+..+.....+.|. .+|=.||
T Consensus        70 A~g~g------------------~s~~~~~~~~~~G~-~VIDlS~   95 (334)
T PRK14874         70 SAGGS------------------VSKKYAPKAAAAGA-VVIDNSS   95 (334)
T ss_pred             CCChH------------------HHHHHHHHHHhCCC-EEEECCc
Confidence            86542                  13345555555664 5666665

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.74  E-value=0.00011  Score=67.36  Aligned_cols=75  Identities=20%  Similarity=0.085  Sum_probs=54.2

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC-Ccc-cccCCCCCCCceEEEEcccCChhHHHHHhcCccEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSH-LFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~-~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~v   84 (307)
                      +++|+|+|+|+++ +|..+++.|++.|+ +|++.+++... .+. ...+...   ++.++.+|..+     +...++|+|
T Consensus         3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~~~l~~~---~~~~~~~~~~~-----~~~~~~d~v   72 (450)
T PRK14106          3 LKGKKVLVVGAGV-SGLALAKFLKKLGA-KVILTDEKEEDQLKEALEELGEL---GIELVLGEYPE-----EFLEGVDLV   72 (450)
T ss_pred             cCCCEEEEECCCH-HHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhc---CCEEEeCCcch-----hHhhcCCEE
Confidence            3468999999877 99999999999999 99999886422 111 1111111   56777788765     345679999


Q ss_pred             EEeccCC
Q 021819           85 FHVASPC   91 (307)
Q Consensus        85 i~~a~~~   91 (307)
                      |+++|..
T Consensus        73 v~~~g~~   79 (450)
T PRK14106         73 VVSPGVP   79 (450)
T ss_pred             EECCCCC
Confidence            9998864

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.72  E-value=0.00016  Score=62.66  Aligned_cols=111  Identities=14%  Similarity=0.101  Sum_probs=75.5

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcccccCCCC----CCCceEEEEcccCChhHHHHHhcCccEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGA----GDANLRVFEADVLDSGAVSRAVEGCKGV   84 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~i~~D~~d~~~~~~~~~~~d~v   84 (307)
                      ++|.|.|+ |.+|+.++..|+.+|. ++|+.++++.+..+........    ........ .  .+.+    .++++|+|
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~~----~l~~aDIV   72 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDYS----DCKDADIV   72 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCHH----HhCCCCEE
Confidence            37999995 9999999999999985 3899999976654433221100    00022222 1  2322    35899999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEec
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTS  130 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~iS  130 (307)
                      |+++|.....  .....+.++.|....+.+.+.+++++-. .++.+|
T Consensus        73 Iitag~~~~~--g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvs  117 (306)
T cd05291          73 VITAGAPQKP--GETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVAS  117 (306)
T ss_pred             EEccCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            9999875442  2345788999999999999999988644 344444

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.64  E-value=0.0019  Score=48.75  Aligned_cols=103  Identities=16%  Similarity=0.225  Sum_probs=68.3

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCC-------CC--------------CCCceEEEEcc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP-------GA--------------GDANLRVFEAD   67 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~-------~~--------------~~~~~~~i~~D   67 (307)
                      .++|+|.| .|.+|+.+++.|...|..++..++...-...++....       ..              ...++..+..+
T Consensus         2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            46899999 5999999999999999988998887432222221110       00              11256666667


Q ss_pred             cCChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           68 VLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        68 ~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      + +.+...++++++|+||.+...                 ......+.+.|++.+. .+|+.++
T Consensus        81 ~-~~~~~~~~~~~~d~vi~~~d~-----------------~~~~~~l~~~~~~~~~-p~i~~~~  125 (135)
T PF00899_consen   81 I-DEENIEELLKDYDIVIDCVDS-----------------LAARLLLNEICREYGI-PFIDAGV  125 (135)
T ss_dssp             C-SHHHHHHHHHTSSEEEEESSS-----------------HHHHHHHHHHHHHTT--EEEEEEE
T ss_pred             c-ccccccccccCCCEEEEecCC-----------------HHHHHHHHHHHHHcCC-CEEEEEe
Confidence            6 446677888999999998322                 2234457778988885 5777664

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.62  E-value=0.00037  Score=61.34  Aligned_cols=100  Identities=20%  Similarity=0.187  Sum_probs=60.1

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEE-EcccCChhHHHHHhcCccEEEEe
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVF-EADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i-~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      |++|.|.||||++|+.+++.|.+....+++++.++.+..+.+.....    .+..+ ..++.+.+..  ..+++|+||-|
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~----~~~~~~~~~~~~~~~~--~~~~vD~Vf~a   75 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHP----HLRGLVDLVLEPLDPE--ILAGADVVFLA   75 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCc----ccccccCceeecCCHH--HhcCCCEEEEC
Confidence            46999999999999999999998743377776664333222221110    11111 1233333332  45789999987


Q ss_pred             ccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcc
Q 021819           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS  133 (307)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~  133 (307)
                      .+..                  ....++..+.+.| +++|=.|+..
T Consensus        76 lP~~------------------~~~~~v~~a~~aG-~~VID~S~~f  102 (343)
T PRK00436         76 LPHG------------------VSMDLAPQLLEAG-VKVIDLSADF  102 (343)
T ss_pred             CCcH------------------HHHHHHHHHHhCC-CEEEECCccc
Confidence            5431                  1345666666666 5788888754

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.61  E-value=0.0013  Score=57.69  Aligned_cols=105  Identities=12%  Similarity=0.155  Sum_probs=69.2

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccC----------------------CC-CCCCceEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL----------------------PG-AGDANLRV   63 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~----------------------~~-~~~~~~~~   63 (307)
                      ++.++|+|.|+ |.+|+++++.|...|..+++.++++.-...++...                      .. .....++.
T Consensus        22 L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~  100 (338)
T PRK12475         22 IREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVP  100 (338)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEE
Confidence            45679999995 88999999999999988899888854222221110                      00 01114566


Q ss_pred             EEcccCChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           64 FEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        64 i~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      +..|++ .+.+.++++++|+||.+...                 ...-..+-+.|.+.+++ +|+.+.
T Consensus       101 ~~~~~~-~~~~~~~~~~~DlVid~~D~-----------------~~~r~~in~~~~~~~ip-~i~~~~  149 (338)
T PRK12475        101 VVTDVT-VEELEELVKEVDLIIDATDN-----------------FDTRLLINDLSQKYNIP-WIYGGC  149 (338)
T ss_pred             EeccCC-HHHHHHHhcCCCEEEEcCCC-----------------HHHHHHHHHHHHHcCCC-EEEEEe
Confidence            667775 45677888999999998421                 11223455778888864 777654

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.61  E-value=0.00055  Score=59.64  Aligned_cols=117  Identities=15%  Similarity=0.094  Sum_probs=74.1

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      .+||.|+|| |.+|+.++..|...|..+|+.++++.+..+.......... ........+....+.+ .++++|+||.++
T Consensus         5 ~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~-~~~~~~~~i~~~~d~~-~l~~ADiVVita   81 (319)
T PTZ00117          5 RKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFS-TLVGSNINILGTNNYE-DIKDSDVVVITA   81 (319)
T ss_pred             CcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhc-cccCCCeEEEeCCCHH-HhCCCCEEEECC
Confidence            469999997 9999999999998884478888887654332111000000 0000001111112344 568999999999


Q ss_pred             cCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcE-EEEec
Q 021819           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR-VVVTS  130 (307)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~iS  130 (307)
                      |.....  .....+.+..|....+.+.+.+.+.+-+. ++++|
T Consensus        82 g~~~~~--g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvs  122 (319)
T PTZ00117         82 GVQRKE--EMTREDLLTINGKIMKSVAESVKKYCPNAFVICVT  122 (319)
T ss_pred             CCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            875432  23356788889888888999888886444 56655

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.59  E-value=0.00028  Score=52.23  Aligned_cols=96  Identities=18%  Similarity=0.226  Sum_probs=55.2

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCCeEEE-EeCCCCCCcccccCCCCCCCceE-EEEcccCChhHHHHHhcCccEEEEec
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYTSINA-TVFPGSDSSHLFALPGAGDANLR-VFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~~V~~-~~r~~~~~~~~~~~~~~~~~~~~-~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      ||.|+||||++|+.|++.|.+...-++.. ..++.+....+....+... ... ...-| .+.+    .++++|+||.|.
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~-~~~~----~~~~~Dvvf~a~   74 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPK-GFEDLSVED-ADPE----ELSDVDVVFLAL   74 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGT-TTEEEBEEE-TSGH----HHTTESEEEE-S
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccc-cccceeEee-cchh----HhhcCCEEEecC
Confidence            68999999999999999999974335444 4444423333322211000 111 11112 2323    238999999995


Q ss_pred             cCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      +.                  ..+..+.+.+.+.|+ ++|=.|+
T Consensus        75 ~~------------------~~~~~~~~~~~~~g~-~ViD~s~   98 (121)
T PF01118_consen   75 PH------------------GASKELAPKLLKAGI-KVIDLSG   98 (121)
T ss_dssp             CH------------------HHHHHHHHHHHHTTS-EEEESSS
T ss_pred             ch------------------hHHHHHHHHHhhCCc-EEEeCCH
Confidence            43                  124556667777776 5766665

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.58  E-value=0.0013  Score=56.89  Aligned_cols=113  Identities=12%  Similarity=0.121  Sum_probs=75.4

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCccccc-CCC---CC-CCceEEEEcccCChhHHHHHhcCccEE
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFA-LPG---AG-DANLRVFEADVLDSGAVSRAVEGCKGV   84 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~-~~~---~~-~~~~~~i~~D~~d~~~~~~~~~~~d~v   84 (307)
                      ||.|.|+ |.+|+.++..|+.++. .+++.++.+.+..+.... +..   .. ..++....+   |    .+.++++|+|
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~---~----y~~~~~aDiv   72 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAG---D----YDDCADADII   72 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEEC---C----HHHhCCCCEE
Confidence            5789998 9999999999998875 578888886554332111 110   00 002333222   2    2456899999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      |-+||.........+..+.+..|....+.+.+.+.+++-..++.+-|
T Consensus        73 vitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvs  119 (307)
T cd05290          73 VITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILIT  119 (307)
T ss_pred             EECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            99999854422111147889999999999999999987555555554

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.57  E-value=0.00036  Score=60.93  Aligned_cols=95  Identities=18%  Similarity=0.218  Sum_probs=56.9

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCC--CeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNY--TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      |++|.|+||||++|+.|++.|.++++  .++..+......-+.+. +.     +   ...++.+.+.. + ++++|+||-
T Consensus         4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~-~~-----~---~~l~~~~~~~~-~-~~~vD~vFl   72 (336)
T PRK05671          4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVP-FA-----G---KNLRVREVDSF-D-FSQVQLAFF   72 (336)
T ss_pred             CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeec-cC-----C---cceEEeeCChH-H-hcCCCEEEE
Confidence            46999999999999999999997765  24444433322211111 10     1   12333333322 2 478999999


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcc
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS  133 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~  133 (307)
                      +.+..                  .+..+++.+.+.|+ ++|=.||..
T Consensus        73 a~p~~------------------~s~~~v~~~~~~G~-~VIDlS~~f  100 (336)
T PRK05671         73 AAGAA------------------VSRSFAEKARAAGC-SVIDLSGAL  100 (336)
T ss_pred             cCCHH------------------HHHHHHHHHHHCCC-eEEECchhh
Confidence            86521                  12346677777775 577777644

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=97.57  E-value=0.00081  Score=55.73  Aligned_cols=116  Identities=17%  Similarity=0.095  Sum_probs=76.3

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCC-CCeEEEEeCCCCC--CcccccCCCCCCCceEEEEcccCChhHHHHHhcCccE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSD--SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~   83 (307)
                      .++-||.|.||+|+||+.|.-.|..+. ..++...+-...+  ...+..+..    +  ..-...+-++.++++++++|+
T Consensus        26 ~~~~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~~GVaaDlSHI~T----~--s~V~g~~g~~~L~~al~~adv   99 (345)
T KOG1494|consen   26 QRGLKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANTPGVAADLSHINT----N--SSVVGFTGADGLENALKGADV   99 (345)
T ss_pred             cCcceEEEEecCCccCccHHHHHhcCcccceeeeeecccCCcccccccccCC----C--CceeccCChhHHHHHhcCCCE
Confidence            346799999999999999998776553 2344444433211  222222211    1  111233445789999999999


Q ss_pred             EEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcE-EEEec
Q 021819           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR-VVVTS  130 (307)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~iS  130 (307)
                      ||--||..+....  ...+.|++|......|..++.+..-+. +.+||
T Consensus       100 VvIPAGVPRKPGM--TRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIs  145 (345)
T KOG1494|consen  100 VVIPAGVPRKPGM--TRDDLFNINAGIVKTLAAAIAKCCPNALILVIS  145 (345)
T ss_pred             EEecCCCCCCCCC--cHHHhhhcchHHHHHHHHHHHhhCccceeEeec
Confidence            9999998665332  346899999999999999998875443 44444

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.56  E-value=0.0007  Score=50.29  Aligned_cols=92  Identities=21%  Similarity=0.306  Sum_probs=55.2

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHC-CCCeEEEE-eCCCCCC--cccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDN-NYTSINAT-VFPGSDS--SHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~-g~~~V~~~-~r~~~~~--~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      ++|.|.|++|-+|+.+++.+.+. +. ++.+. +|+++..  +....+....       ...+.-.++++++++.+|++|
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~-~lv~~v~~~~~~~~g~d~g~~~~~~-------~~~~~v~~~l~~~~~~~DVvI   72 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGF-ELVGAVDRKPSAKVGKDVGELAGIG-------PLGVPVTDDLEELLEEADVVI   72 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTE-EEEEEEETTTSTTTTSBCHHHCTSS-------T-SSBEBS-HHHHTTH-SEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCc-EEEEEEecCCcccccchhhhhhCcC-------CcccccchhHHHhcccCCEEE
Confidence            48999999999999999999994 66 65554 4544221  1111111100       111222256778888899999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEE
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV  128 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  128 (307)
                      .+..                  -.++...++.|.++|+. +|.
T Consensus        73 DfT~------------------p~~~~~~~~~~~~~g~~-~Vi   96 (124)
T PF01113_consen   73 DFTN------------------PDAVYDNLEYALKHGVP-LVI   96 (124)
T ss_dssp             EES-------------------HHHHHHHHHHHHHHT-E-EEE
T ss_pred             EcCC------------------hHHhHHHHHHHHhCCCC-EEE
Confidence            9852                  22456678888888754 444

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.55  E-value=0.0017  Score=57.03  Aligned_cols=104  Identities=18%  Similarity=0.264  Sum_probs=69.7

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-------------------------cCCCCCCCce
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-------------------------ALPGAGDANL   61 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-------------------------~~~~~~~~~~   61 (307)
                      ++.++|+|.|+ |++|+.+++.|...|..++..++.+.-...++.                         ++.+  ...+
T Consensus        22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp--~v~v   98 (339)
T PRK07688         22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINS--DVRV   98 (339)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCC--CcEE
Confidence            45679999996 999999999999999988999888532221111                         1111  1145


Q ss_pred             EEEEcccCChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCc
Q 021819           62 RVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (307)
Q Consensus        62 ~~i~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~  132 (307)
                      ..+..+++ ++.+.++++++|+||.+..                 |......+.++|.+.++ .+|+.++.
T Consensus        99 ~~~~~~~~-~~~~~~~~~~~DlVid~~D-----------------n~~~r~~ln~~~~~~~i-P~i~~~~~  150 (339)
T PRK07688         99 EAIVQDVT-AEELEELVTGVDLIIDATD-----------------NFETRFIVNDAAQKYGI-PWIYGACV  150 (339)
T ss_pred             EEEeccCC-HHHHHHHHcCCCEEEEcCC-----------------CHHHHHHHHHHHHHhCC-CEEEEeee
Confidence            55666664 3456677889999998832                 12233457788888885 47786653

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.53  E-value=0.0019  Score=52.14  Aligned_cols=109  Identities=16%  Similarity=0.216  Sum_probs=68.6

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-------------------------CCCCCCCce
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-------------------------LPGAGDANL   61 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-------------------------~~~~~~~~~   61 (307)
                      ++..+|+|.|++| +|+++++.|...|..+++.++.+.-...++..                         +.+  ..++
T Consensus        17 L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp--~v~i   93 (198)
T cd01485          17 LRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNP--NVKL   93 (198)
T ss_pred             HhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCC--CCEE
Confidence            3457999999755 99999999999999889888874322222211                         111  1144


Q ss_pred             EEEEcccCC-hhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceecc
Q 021819           62 RVFEADVLD-SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVP  137 (307)
Q Consensus        62 ~~i~~D~~d-~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~  137 (307)
                      +.+..++.+ .+...+.++++|+||.+...                 ......+-+.|+++++ .+|+.++ .+.++
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~dvVi~~~d~-----------------~~~~~~ln~~c~~~~i-p~i~~~~-~G~~G  151 (198)
T cd01485          94 SIVEEDSLSNDSNIEEYLQKFTLVIATEEN-----------------YERTAKVNDVCRKHHI-PFISCAT-YGLIG  151 (198)
T ss_pred             EEEecccccchhhHHHHHhCCCEEEECCCC-----------------HHHHHHHHHHHHHcCC-CEEEEEe-ecCEE
Confidence            555555542 34456677889999876211                 2233456688999886 4777765 33443

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PLN02602 lactate dehydrogenase

Probab=97.51  E-value=0.00073  Score=59.37  Aligned_cols=111  Identities=14%  Similarity=0.143  Sum_probs=74.5

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCccccc-CCC---CCCCceEEEEcccCChhHHHHHhcCccEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFA-LPG---AGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~-~~~---~~~~~~~~i~~D~~d~~~~~~~~~~~d~v   84 (307)
                      +||.|+|+ |.+|+.++..|+.++. .+++.++.+......... +..   ... .. -+.++ .|   .+ .++++|+|
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~-~~-~i~~~-~d---y~-~~~daDiV  109 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLP-RT-KILAS-TD---YA-VTAGSDLC  109 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCC-CC-EEEeC-CC---HH-HhCCCCEE
Confidence            69999996 9999999999998875 578888886654432211 100   000 11 12111 12   22 37899999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEec
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTS  130 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~iS  130 (307)
                      |-+||.....  .....+.+..|..-.+.+.+.+.+++-+ .+|.+|
T Consensus       110 VitAG~~~k~--g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt  154 (350)
T PLN02602        110 IVTAGARQIP--GESRLNLLQRNVALFRKIIPELAKYSPDTILLIVS  154 (350)
T ss_pred             EECCCCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9999975442  2345788999999999999999888643 455544

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.50  E-value=0.0019  Score=53.48  Aligned_cols=105  Identities=16%  Similarity=0.190  Sum_probs=68.2

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccC-------CC------------C--CCCceEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-------PG------------A--GDANLRVFE   65 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-------~~------------~--~~~~~~~i~   65 (307)
                      ++.++|+|.| .|.+|+++++.|...|..+++.++.+.-...++.+.       ..            .  ...++..+.
T Consensus        19 L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~   97 (228)
T cd00757          19 LKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN   97 (228)
T ss_pred             HhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec
Confidence            4467999999 699999999999999998888887643222222110       00            0  011455555


Q ss_pred             cccCChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           66 ADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        66 ~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      .++ +.+.+.++++++|+||.+...                 ...-..+.+.|.++++ .+|+.+.
T Consensus        98 ~~i-~~~~~~~~~~~~DvVi~~~d~-----------------~~~r~~l~~~~~~~~i-p~i~~g~  144 (228)
T cd00757          98 ERL-DAENAEELIAGYDLVLDCTDN-----------------FATRYLINDACVKLGK-PLVSGAV  144 (228)
T ss_pred             cee-CHHHHHHHHhCCCEEEEcCCC-----------------HHHHHHHHHHHHHcCC-CEEEEEe
Confidence            555 345677788899999998432                 1123457788888885 4777654

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK04148 hypothetical protein; Provisional

Probab=97.48  E-value=0.00099  Score=49.67  Aligned_cols=95  Identities=15%  Similarity=0.243  Sum_probs=70.1

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      +++++++.|. | -|.++++.|.+.|+ +|++++.++...+..+..      .+..+.+|+.+++ + ++-+++|.|+-+
T Consensus        16 ~~~kileIG~-G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~------~~~~v~dDlf~p~-~-~~y~~a~liysi   84 (134)
T PRK04148         16 KNKKIVELGI-G-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKL------GLNAFVDDLFNPN-L-EIYKNAKLIYSI   84 (134)
T ss_pred             cCCEEEEEEe-c-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHh------CCeEEECcCCCCC-H-HHHhcCCEEEEe
Confidence            4578999995 6 89999999999999 999999988765555443      6789999999876 2 456788999876


Q ss_pred             ccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEec
Q 021819           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (307)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iS  130 (307)
                      =.          +.+       -..-+++.+++.+..-+|..=
T Consensus        85 rp----------p~e-------l~~~~~~la~~~~~~~~i~~l  110 (134)
T PRK04148         85 RP----------PRD-------LQPFILELAKKINVPLIIKPL  110 (134)
T ss_pred             CC----------CHH-------HHHHHHHHHHHcCCCEEEEcC
Confidence            11          112       244678888888876555543

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.48  E-value=0.00077  Score=58.54  Aligned_cols=116  Identities=15%  Similarity=0.156  Sum_probs=72.4

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      |+||.|+|+ |.+|+.++..|...|..+|+.++++++..+.... +....  ........+....+. +.++++|+||.+
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~--~~~~~~~~i~~~~d~-~~~~~aDiVii~   77 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAA--PVEGFDTKITGTNDY-EDIAGSDVVVIT   77 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhh--hhcCCCcEEEeCCCH-HHHCCCCEEEEC
Confidence            569999998 9999999999998874389999986654432111 10000  000000111111123 246899999999


Q ss_pred             ccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcE-EEEec
Q 021819           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR-VVVTS  130 (307)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~iS  130 (307)
                      ++.....  .....+.+..|..-.+.+++.+.+..-.. +|.+|
T Consensus        78 ~~~p~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t  119 (307)
T PRK06223         78 AGVPRKP--GMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVT  119 (307)
T ss_pred             CCCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            8864432  22345677888888888988888775443 55554

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.46  E-value=0.0011  Score=53.80  Aligned_cols=105  Identities=12%  Similarity=0.084  Sum_probs=67.6

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccC-------------------CCCCC--CceEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-------------------PGAGD--ANLRVFE   65 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-------------------~~~~~--~~~~~i~   65 (307)
                      ++.++|+|.| .|.+|+.+++.|...|..+++.++.+.-...++.+.                   ...-+  .+++.+.
T Consensus        19 l~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~   97 (202)
T TIGR02356        19 LLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALK   97 (202)
T ss_pred             hcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEeh
Confidence            4567999999 699999999999999988899988753222222110                   00001  1334444


Q ss_pred             cccCChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           66 ADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        66 ~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      .++ +.+.+.+.++++|+||.+...                 ...-..+.+.|+++++ .+|+.++
T Consensus        98 ~~i-~~~~~~~~~~~~D~Vi~~~d~-----------------~~~r~~l~~~~~~~~i-p~i~~~~  144 (202)
T TIGR02356        98 ERV-TAENLELLINNVDLVLDCTDN-----------------FATRYLINDACVALGT-PLISAAV  144 (202)
T ss_pred             hcC-CHHHHHHHHhCCCEEEECCCC-----------------HHHHHHHHHHHHHcCC-CEEEEEe
Confidence            444 335577788999999998422                 1123346678888885 4777664

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.45  E-value=0.0049  Score=46.98  Aligned_cols=101  Identities=16%  Similarity=0.208  Sum_probs=64.4

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCC-------------------CC-C-CCceEEEEcccC
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP-------------------GA-G-DANLRVFEADVL   69 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~-------------------~~-~-~~~~~~i~~D~~   69 (307)
                      +|+|.|+ |.+|+.+++.|...|..++..++.+.-...++....                   .. . ..+++.+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            4789995 999999999999999978888876432222221110                   00 0 113444555554


Q ss_pred             ChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           70 DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        70 d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      +.. ..+.++++|+||.+...                 ......+.+.|++.++ .+|..++
T Consensus        80 ~~~-~~~~~~~~diVi~~~d~-----------------~~~~~~l~~~~~~~~i-~~i~~~~  122 (143)
T cd01483          80 EDN-LDDFLDGVDLVIDAIDN-----------------IAVRRALNRACKELGI-PVIDAGG  122 (143)
T ss_pred             hhh-HHHHhcCCCEEEECCCC-----------------HHHHHHHHHHHHHcCC-CEEEEcC
Confidence            433 35677889999988432                 2234567788998885 4777665

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.44  E-value=0.00042  Score=50.77  Aligned_cols=70  Identities=20%  Similarity=0.248  Sum_probs=55.1

Q ss_pred             EEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHH-hcCccEEEEecc
Q 021819           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHVAS   89 (307)
Q Consensus        12 ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~d~vi~~a~   89 (307)
                      |+|.|. |-+|+.+++.|.+.+. +|+++++++...+.+...      ++.++.+|.+|++.++++ +++++.|+-+..
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~------~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~   71 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGI-DVVVIDRDPERVEELREE------GVEVIYGDATDPEVLERAGIEKADAVVILTD   71 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHT------TSEEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhc------ccccccccchhhhHHhhcCccccCEEEEccC
Confidence            578886 7899999999999776 899999877665555443      688999999999999875 568898887743

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.42  E-value=0.00079  Score=61.82  Aligned_cols=75  Identities=20%  Similarity=0.268  Sum_probs=58.5

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHH-hcCccEEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFH   86 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~d~vi~   86 (307)
                      .+++|+|.|+ |.+|+.+++.|.+.|+ +|++++++++..+.+....   . ++..+.+|.++.+.++++ ++++|+||-
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~-~v~vid~~~~~~~~~~~~~---~-~~~~i~gd~~~~~~L~~~~~~~a~~vi~  303 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEKEGY-SVKLIERDPERAEELAEEL---P-NTLVLHGDGTDQELLEEEGIDEADAFIA  303 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHC---C-CCeEEECCCCCHHHHHhcCCccCCEEEE
Confidence            3679999997 9999999999999999 8999988766544433321   1 567899999999988654 568899886


Q ss_pred             ec
Q 021819           87 VA   88 (307)
Q Consensus        87 ~a   88 (307)
                      +.
T Consensus       304 ~~  305 (453)
T PRK09496        304 LT  305 (453)
T ss_pred             CC
Confidence            53

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.40  E-value=0.00081  Score=57.00  Aligned_cols=115  Identities=14%  Similarity=0.063  Sum_probs=74.4

Q ss_pred             EEEeCCchhhHHHHHHHHHHCC--C-CeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819           12 VCVTGANGFIGTWLVKTLLDNN--Y-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus        12 ilItGatG~iG~~l~~~L~~~g--~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      |.|+||+|.+|..++..|+..|  . .+|..++++++..+.......... ... ....+.-.++..+.++++|+||.++
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~-~~~-~~~~i~~~~d~~~~~~~aDiVv~t~   78 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAV-EPL-ADIKVSITDDPYEAFKDADVVIITA   78 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhh-hhc-cCcEEEECCchHHHhCCCCEEEECC
Confidence            4789999999999999999888  2 389999987655433221110000 000 0112221223556789999999999


Q ss_pred             cCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEec
Q 021819           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTS  130 (307)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~iS  130 (307)
                      +......  .........|+...+.+.+.+++.+-. .++.+|
T Consensus        79 ~~~~~~g--~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          79 GVGRKPG--MGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             CCCCCcC--CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            8755432  234567888999999999999888643 344443

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.38  E-value=0.00022  Score=55.16  Aligned_cols=77  Identities=12%  Similarity=-0.015  Sum_probs=51.3

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      .+.++++|+|+ |.+|+.+++.|.+.|..+|++.+|+.+..+.+....     +...+..+..+.   .+.++++|+||+
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~-----~~~~~~~~~~~~---~~~~~~~Dvvi~   87 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERF-----GELGIAIAYLDL---EELLAEADLIIN   87 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH-----hhcccceeecch---hhccccCCEEEe
Confidence            34679999997 999999999999986338999888765544332211     111112233333   344789999999


Q ss_pred             eccCCC
Q 021819           87 VASPCT   92 (307)
Q Consensus        87 ~a~~~~   92 (307)
                      +.+...
T Consensus        88 ~~~~~~   93 (155)
T cd01065          88 TTPVGM   93 (155)
T ss_pred             CcCCCC
Confidence            987643

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.37  E-value=0.00039  Score=60.42  Aligned_cols=37  Identities=14%  Similarity=0.144  Sum_probs=32.4

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS   47 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~   47 (307)
                      +++|.|+| +|.+|..++..|+++|+ +|++.+|++...
T Consensus         2 ~~~V~VIG-~G~mG~~iA~~la~~G~-~V~v~d~~~~~~   38 (308)
T PRK06129          2 MGSVAIIG-AGLIGRAWAIVFARAGH-EVRLWDADPAAA   38 (308)
T ss_pred             CcEEEEEC-ccHHHHHHHHHHHHCCC-eeEEEeCCHHHH
Confidence            35899999 79999999999999999 999999976543

>cd05295 MDH_like Malate dehydrogenase-like

Probab=97.36  E-value=0.0012  Score=59.60  Aligned_cols=172  Identities=15%  Similarity=0.089  Sum_probs=99.6

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHC---CCCe---EEEEeCC--CCCCcccc-cCCCCC---CCceEEEEcccCChhHHHHH
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDN---NYTS---INATVFP--GSDSSHLF-ALPGAG---DANLRVFEADVLDSGAVSRA   77 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~---g~~~---V~~~~r~--~~~~~~~~-~~~~~~---~~~~~~i~~D~~d~~~~~~~   77 (307)
                      -+|+||||+|.||.+|+-.+.+-   |.++   +..++..  .+..+... .+....   ...+.+. .   +   ..+.
T Consensus       124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~---~---~~ea  196 (452)
T cd05295         124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-T---D---LDVA  196 (452)
T ss_pred             eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-E---C---CHHH
Confidence            48999999999999999999864   3222   4444442  11111100 000000   0012211 1   1   2356


Q ss_pred             hcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCC--cEEEEecCcceeccCCCCCCcccccCCCCchh
Q 021819           78 VEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV--RRVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (307)
Q Consensus        78 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~  155 (307)
                      ++++|+||-+||.....  -.+..+.++.|......+.++..+++-  .+++.+.|-.+ ...    ....-...|   .
T Consensus       197 ~~daDvvIitag~prk~--G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPv-D~~----t~i~~k~ap---g  266 (452)
T cd05295         197 FKDAHVIVLLDDFLIKE--GEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFL-NLK----TSILIKYAP---S  266 (452)
T ss_pred             hCCCCEEEECCCCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcH-HHH----HHHHHHHcC---C
Confidence            78999999999975442  245678999999999999999988865  56777665221 000    000000000   0


Q ss_pred             hhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCC
Q 021819          156 YCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (307)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~  200 (307)
                      +  .+....|.+....-++....+++.+++...|+-..|+|....
T Consensus       267 i--P~~rVig~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG~  309 (452)
T cd05295         267 I--PRKNIIAVARLQENRAKALLARKLNVNSAGIKDVIVWGNIGG  309 (452)
T ss_pred             C--CHHHEEEecchHHHHHHHHHHHHhCcCHHHceeeEEEEccCC
Confidence            0  111445566556445555667778888888877788776443

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.36  E-value=0.00089  Score=59.01  Aligned_cols=101  Identities=18%  Similarity=0.157  Sum_probs=58.7

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEE-eCCCCCCcccccCCCCCCCceEEE-EcccCChhHHHHHhcCccEEEEe
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDSSHLFALPGAGDANLRVF-EADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~i-~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      ++|.|.||||++|..+++.|.+....+++.+ +++....+.+.....    .+... ..++.+. +..++.+++|+||-|
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~----~l~~~~~~~~~~~-~~~~~~~~~DvVf~a   75 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHP----HLRGLVDLNLEPI-DEEEIAEDADVVFLA   75 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCc----cccccCCceeecC-CHHHhhcCCCEEEEC
Confidence            3899999999999999999997743377744 443322222211100    11111 1112211 123344689999998


Q ss_pred             ccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcce
Q 021819           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISA  134 (307)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~  134 (307)
                      .+..                  .+..++..+.+.| .++|=.|+...
T Consensus        76 lP~~------------------~s~~~~~~~~~~G-~~VIDlS~~fR  103 (346)
T TIGR01850        76 LPHG------------------VSAELAPELLAAG-VKVIDLSADFR  103 (346)
T ss_pred             CCch------------------HHHHHHHHHHhCC-CEEEeCChhhh
Confidence            6531                  2456666676677 57888887543

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.33  E-value=0.0011  Score=57.36  Aligned_cols=112  Identities=16%  Similarity=0.124  Sum_probs=74.1

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCccccc-CCCCC--CCceEEEEcccCChhHHHHHhcCccEEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFA-LPGAG--DANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~-~~~~~--~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      +||.|+|+ |.+|+.++..|+..|. .+++.++.+.+....... +....  .....+...  .|+   + .++++|+||
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy---~-~~~~adivv   76 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDY---S-VTANSKVVI   76 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCH---H-HhCCCCEEE
Confidence            48999996 9999999999988875 578888886644322111 10000  001111111  233   3 368999999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEec
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTS  130 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~iS  130 (307)
                      -+||.....  .....+.+..|..-.+.+.+.+++++-+ .++.+|
T Consensus        77 itaG~~~k~--g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs  120 (312)
T cd05293          77 VTAGARQNE--GESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVS  120 (312)
T ss_pred             ECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEcc
Confidence            999976542  2456788999999999999999988643 455544

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.31  E-value=0.0013  Score=57.78  Aligned_cols=91  Identities=18%  Similarity=0.205  Sum_probs=55.3

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCC--eEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYT--SINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      +|.|.||||++|+.|++.|.++++.  ++..+.+.....+.+...      +......|+. .    ..++++|+||-++
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~~------~~~~~~~~~~-~----~~~~~~D~v~~a~   69 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTFK------GKELEVNEAK-I----ESFEGIDIALFSA   69 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeeeeC------CeeEEEEeCC-h----HHhcCCCEEEECC
Confidence            5899999999999999999987762  233444543333222211      3344445553 1    2347899999987


Q ss_pred             cCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      +...                  +..+++...+.|+ ++|=.||
T Consensus        70 g~~~------------------s~~~a~~~~~~G~-~VID~ss   93 (339)
T TIGR01296        70 GGSV------------------SKEFAPKAAKCGA-IVIDNTS   93 (339)
T ss_pred             CHHH------------------HHHHHHHHHHCCC-EEEECCH
Confidence            6521                  3344555555665 4665565

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.31  E-value=0.00022  Score=60.89  Aligned_cols=76  Identities=17%  Similarity=0.173  Sum_probs=52.2

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      .++++++|+|+ |++|++++..|.+.|..+|++..|+.++.+.+........ .+.+   ++    +..+.+.++|+|||
T Consensus       121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~-~~~~---~~----~~~~~~~~~DivIn  191 (278)
T PRK00258        121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG-KAEL---DL----ELQEELADFDLIIN  191 (278)
T ss_pred             CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-ceee---cc----cchhccccCCEEEE
Confidence            45689999996 9999999999999995589999998766554433211000 0111   11    23355678999999


Q ss_pred             eccCC
Q 021819           87 VASPC   91 (307)
Q Consensus        87 ~a~~~   91 (307)
                      +....
T Consensus       192 aTp~g  196 (278)
T PRK00258        192 ATSAG  196 (278)
T ss_pred             CCcCC
Confidence            97654

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=97.30  E-value=0.0058  Score=51.01  Aligned_cols=95  Identities=14%  Similarity=0.121  Sum_probs=70.6

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~vi~   86 (307)
                      |++|+|.|||+ =|+.|++.|.+.|+ .|+...-.....  ....      .+....+-+.|.+++.++++  ++++||.
T Consensus         2 ~~~IlvlgGT~-egr~la~~L~~~g~-~v~~Svat~~g~--~~~~------~~~v~~G~l~~~~~l~~~l~~~~i~~VID   71 (248)
T PRK08057          2 MPRILLLGGTS-EARALARALAAAGV-DIVLSLAGRTGG--PADL------PGPVRVGGFGGAEGLAAYLREEGIDLVID   71 (248)
T ss_pred             CceEEEEechH-HHHHHHHHHHhCCC-eEEEEEccCCCC--cccC------CceEEECCCCCHHHHHHHHHHCCCCEEEE
Confidence            46899999975 69999999999998 666655443222  1111      56677788879899999986  7899999


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEE
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV  128 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  128 (307)
                      ....+.               ...+.++.++|++.++..+=|
T Consensus        72 ATHPfA---------------~~is~~a~~ac~~~~ipyiR~   98 (248)
T PRK08057         72 ATHPYA---------------AQISANAAAACRALGIPYLRL   98 (248)
T ss_pred             CCCccH---------------HHHHHHHHHHHHHhCCcEEEE
Confidence            876643               234788999999998875555

>PRK08223 hypothetical protein; Validated

Probab=97.29  E-value=0.0048  Score=52.40  Aligned_cols=107  Identities=13%  Similarity=0.156  Sum_probs=67.8

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCC-------------------C--CCCceEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG-------------------A--GDANLRVFE   65 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-------------------~--~~~~~~~i~   65 (307)
                      ++..+|+|.|+ |++|+.+++.|...|..++..++.+.-...++.+..-                   .  ...+++.+.
T Consensus        25 L~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~  103 (287)
T PRK08223         25 LRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFP  103 (287)
T ss_pred             HhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            45679999995 9999999999999999889888875433333322100                   0  111444555


Q ss_pred             cccCChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           66 ADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        66 ~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      ..++. +...++++++|+||.+.-..               ++..-..+-++|++.++. +|+-|.
T Consensus       104 ~~l~~-~n~~~ll~~~DlVvD~~D~~---------------~~~~r~~ln~~c~~~~iP-~V~~~~  152 (287)
T PRK08223        104 EGIGK-ENADAFLDGVDVYVDGLDFF---------------EFDARRLVFAACQQRGIP-ALTAAP  152 (287)
T ss_pred             cccCc-cCHHHHHhCCCEEEECCCCC---------------cHHHHHHHHHHHHHcCCC-EEEEec
Confidence            55543 34667788889888652110               112344577788888854 777553

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=97.29  E-value=0.0078  Score=52.25  Aligned_cols=110  Identities=16%  Similarity=0.209  Sum_probs=72.9

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcc----cccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      +|.|.|+ |.+|..++..|+.+|. ++|+.++++....+.    +........ ......   .|.    +.++++|+||
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~-~~~i~~---~d~----~~l~~aDiVi   72 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVK-PVRIYA---GDY----ADCKGADVVV   72 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccC-CeEEee---CCH----HHhCCCCEEE
Confidence            7999997 9999999999999983 489999987654331    111110001 122111   232    2478999999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      .+++....  ......+....|......+.+.+++.+-.-++.+-|
T Consensus        73 ita~~~~~--~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~t  116 (308)
T cd05292          73 ITAGANQK--PGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVT  116 (308)
T ss_pred             EccCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            99987543  223456788899999999999988876443444433

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.28  E-value=0.0018  Score=54.60  Aligned_cols=66  Identities=18%  Similarity=0.203  Sum_probs=43.8

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHC-CCCeEEEE-eCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDN-NYTSINAT-VFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~-g~~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      ++|.|+|++|.+|+.+++.+.+. +. ++++. +++++.....             -..++...+++.++++++|+||++
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~~~~-elvav~d~~~~~~~~~-------------~~~~i~~~~dl~~ll~~~DvVid~   67 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAAEDL-ELVAAVDRPGSPLVGQ-------------GALGVAITDDLEAVLADADVLIDF   67 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEecCCcccccc-------------CCCCccccCCHHHhccCCCEEEEC
Confidence            58999999999999999998875 56 66664 4443322111             112333334566666789999998


Q ss_pred             cc
Q 021819           88 AS   89 (307)
Q Consensus        88 a~   89 (307)
                      +.
T Consensus        68 t~   69 (257)
T PRK00048         68 TT   69 (257)
T ss_pred             CC
Confidence            63

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.28  E-value=0.004  Score=56.28  Aligned_cols=113  Identities=12%  Similarity=-0.009  Sum_probs=76.1

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHC-------CC-CeEEEEeCCCCCCcccccCCCCC----CCceEEEEcccCChhHHHH
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDN-------NY-TSINATVFPGSDSSHLFALPGAG----DANLRVFEADVLDSGAVSR   76 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~-------g~-~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~i~~D~~d~~~~~~   76 (307)
                      --||.|+|++|.+|.+++-.|+..       +. .+++.++++.+..+.........    ..++. +..  .+    .+
T Consensus       100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~-i~~--~~----ye  172 (444)
T PLN00112        100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVS-IGI--DP----YE  172 (444)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceE-Eec--CC----HH
Confidence            358999999999999999999988       53 36888888766654322111000    00111 111  12    24


Q ss_pred             HhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHh-cCCc-EEEEec
Q 021819           77 AVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKR-FGVR-RVVVTS  130 (307)
Q Consensus        77 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~-~~v~iS  130 (307)
                      .++++|+||-+||.....  -.+..+.++.|....+.+.+...+ .+-. .+|.+|
T Consensus       173 ~~kdaDiVVitAG~prkp--G~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVs  226 (444)
T PLN00112        173 VFQDAEWALLIGAKPRGP--GMERADLLDINGQIFAEQGKALNEVASRNVKVIVVG  226 (444)
T ss_pred             HhCcCCEEEECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcC
Confidence            568999999999975432  345678999999999999999998 4533 455544

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.26  E-value=0.0041  Score=50.78  Aligned_cols=105  Identities=13%  Similarity=0.199  Sum_probs=65.4

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccC-------------------CC-CCCCceEEEEc
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-------------------PG-AGDANLRVFEA   66 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-------------------~~-~~~~~~~~i~~   66 (307)
                      ++..+|+|.| .|++|+.+++.|...|..+++.++.+.-...++.+.                   .. ....+++.+..
T Consensus        26 L~~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~  104 (212)
T PRK08644         26 LKKAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNE  104 (212)
T ss_pred             HhCCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEee
Confidence            4567899999 599999999999999997899888853222222110                   00 00113444444


Q ss_pred             ccCChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhc-CCcEEEEecC
Q 021819           67 DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSS  131 (307)
Q Consensus        67 D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~iSS  131 (307)
                      .+++ +.+.+.++++|+||.+.-                 |......+.+.|.+. ++ .+|+.+.
T Consensus       105 ~i~~-~~~~~~~~~~DvVI~a~D-----------------~~~~r~~l~~~~~~~~~~-p~I~~~~  151 (212)
T PRK08644        105 KIDE-DNIEELFKDCDIVVEAFD-----------------NAETKAMLVETVLEHPGK-KLVAASG  151 (212)
T ss_pred             ecCH-HHHHHHHcCCCEEEECCC-----------------CHHHHHHHHHHHHHhCCC-CEEEeeh
Confidence            5544 446677888999988721                 122234566777777 64 4777654

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.26  E-value=0.0059  Score=51.07  Aligned_cols=105  Identities=14%  Similarity=0.101  Sum_probs=67.3

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccC--------------------CC-CCCCceEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL--------------------PG-AGDANLRVFE   65 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~--------------------~~-~~~~~~~~i~   65 (307)
                      ++.++|+|.|+ |++|+.+++.|...|..+++.++.+.-...++.+.                    .. ....+++.+.
T Consensus        30 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~  108 (245)
T PRK05690         30 LKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETIN  108 (245)
T ss_pred             hcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence            35679999997 99999999999999988888887743322222110                    00 0111445555


Q ss_pred             cccCChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           66 ADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        66 ~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      ..++ ++.+.++++++|+||.+...                 ...-..+.++|.++++ .+|+.++
T Consensus       109 ~~i~-~~~~~~~~~~~DiVi~~~D~-----------------~~~r~~ln~~~~~~~i-p~v~~~~  155 (245)
T PRK05690        109 ARLD-DDELAALIAGHDLVLDCTDN-----------------VATRNQLNRACFAAKK-PLVSGAA  155 (245)
T ss_pred             ccCC-HHHHHHHHhcCCEEEecCCC-----------------HHHHHHHHHHHHHhCC-EEEEeee
Confidence            5554 44567788899999998421                 1223356678888875 4776443

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=97.25  E-value=0.0047  Score=51.45  Aligned_cols=105  Identities=14%  Similarity=0.109  Sum_probs=66.8

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCC-------C------------CCCC--ceEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP-------G------------AGDA--NLRVFE   65 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~-------~------------~~~~--~~~~i~   65 (307)
                      ++..+|+|.| .|++|+.+++.|...|..+++.++.+.-...++.+..       .            ..++  ++..+.
T Consensus        22 L~~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~  100 (240)
T TIGR02355        22 LKASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPIN  100 (240)
T ss_pred             HhCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence            4567999999 5999999999999999988999888544433332210       0            0011  333343


Q ss_pred             cccCChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           66 ADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        66 ~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      ..+ +.+.+.++++++|+||.+...                 ......+-++|.+.+++ +|+-++
T Consensus       101 ~~i-~~~~~~~~~~~~DlVvd~~D~-----------------~~~r~~ln~~~~~~~ip-~v~~~~  147 (240)
T TIGR02355       101 AKL-DDAELAALIAEHDIVVDCTDN-----------------VEVRNQLNRQCFAAKVP-LVSGAA  147 (240)
T ss_pred             ccC-CHHHHHHHhhcCCEEEEcCCC-----------------HHHHHHHHHHHHHcCCC-EEEEEe
Confidence            333 334566778888999887321                 12234566888888854 777553

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.24  E-value=0.00086  Score=57.45  Aligned_cols=70  Identities=16%  Similarity=0.144  Sum_probs=51.8

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      ..+++++|+|. |.+|+.+++.|...|. +|+..+|+..........      +...+     +.+++.+.++++|+||+
T Consensus       149 l~gk~v~IiG~-G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~------g~~~~-----~~~~l~~~l~~aDiVin  215 (287)
T TIGR02853       149 IHGSNVMVLGF-GRTGMTIARTFSALGA-RVFVGARSSADLARITEM------GLIPF-----PLNKLEEKVAEIDIVIN  215 (287)
T ss_pred             CCCCEEEEEcC-hHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHC------CCeee-----cHHHHHHHhccCCEEEE
Confidence            45789999997 8899999999999999 999999976543332221      22221     23557778899999999


Q ss_pred             ecc
Q 021819           87 VAS   89 (307)
Q Consensus        87 ~a~   89 (307)
                      +..
T Consensus       216 t~P  218 (287)
T TIGR02853       216 TIP  218 (287)
T ss_pred             CCC
Confidence            864

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.23  E-value=0.0011  Score=58.36  Aligned_cols=78  Identities=18%  Similarity=0.138  Sum_probs=56.9

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc----Ccc
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----GCK   82 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----~~d   82 (307)
                      .++++|||.||+|++|+..++.+...|. ..+...++.+..+..+.+      +...+ .|..+++..+...+    ++|
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~l------GAd~v-vdy~~~~~~e~~kk~~~~~~D  227 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKL------GADEV-VDYKDENVVELIKKYTGKGVD  227 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHc------CCcEe-ecCCCHHHHHHHHhhcCCCcc
Confidence            3577999999999999999999988895 555566666677776666      22222 46667655554444    589


Q ss_pred             EEEEeccCCC
Q 021819           83 GVFHVASPCT   92 (307)
Q Consensus        83 ~vi~~a~~~~   92 (307)
                      +|+.|+|...
T Consensus       228 vVlD~vg~~~  237 (347)
T KOG1198|consen  228 VVLDCVGGST  237 (347)
T ss_pred             EEEECCCCCc
Confidence            9999998743

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.21  E-value=0.0072  Score=50.98  Aligned_cols=105  Identities=16%  Similarity=0.265  Sum_probs=64.4

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCC-------------------CCCCC--ceEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP-------------------GAGDA--NLRVFE   65 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~-------------------~~~~~--~~~~i~   65 (307)
                      ++..+|+|.| .|++|+++++.|...|..+++.++.+.-...++....                   ...++  ++..+.
T Consensus        28 L~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~  106 (268)
T PRK15116         28 FADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD  106 (268)
T ss_pred             hcCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe
Confidence            4567999999 5999999999999999878988887433322222100                   00011  233332


Q ss_pred             cccCChhHHHHHhc-CccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           66 ADVLDSGAVSRAVE-GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        66 ~D~~d~~~~~~~~~-~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                       +..+++...+++. ++|+||.+...                 +..-..+.+.|++++++ +|..++
T Consensus       107 -~~i~~e~~~~ll~~~~D~VIdaiD~-----------------~~~k~~L~~~c~~~~ip-~I~~gG  154 (268)
T PRK15116        107 -DFITPDNVAEYMSAGFSYVIDAIDS-----------------VRPKAALIAYCRRNKIP-LVTTGG  154 (268)
T ss_pred             -cccChhhHHHHhcCCCCEEEEcCCC-----------------HHHHHHHHHHHHHcCCC-EEEECC
Confidence             2223445555554 68888887432                 22344688889998864 665554

>PRK08328 hypothetical protein; Provisional

Probab=97.21  E-value=0.0084  Score=49.71  Aligned_cols=105  Identities=14%  Similarity=0.147  Sum_probs=65.4

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccC--------CC--------------CCCCceEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL--------PG--------------AGDANLRVF   64 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~--------~~--------------~~~~~~~~i   64 (307)
                      ++..+|+|.| .|++|+++++.|...|..+++.++.+.-...++.+.        ..              .....++.+
T Consensus        25 L~~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~  103 (231)
T PRK08328         25 LKKAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETF  103 (231)
T ss_pred             HhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEE
Confidence            3467899999 599999999999999998898887643222222110        00              011134444


Q ss_pred             EcccCChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           65 EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        65 ~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      ...+ +++.+.++++++|+||.+.-.                 ...-..+.++|++.+++ +|+.++
T Consensus       104 ~~~~-~~~~~~~~l~~~D~Vid~~d~-----------------~~~r~~l~~~~~~~~ip-~i~g~~  151 (231)
T PRK08328        104 VGRL-SEENIDEVLKGVDVIVDCLDN-----------------FETRYLLDDYAHKKGIP-LVHGAV  151 (231)
T ss_pred             eccC-CHHHHHHHHhcCCEEEECCCC-----------------HHHHHHHHHHHHHcCCC-EEEEee
Confidence            4444 344466778888988887321                 11223455678888854 777554

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.20  E-value=0.0061  Score=50.39  Aligned_cols=106  Identities=12%  Similarity=0.157  Sum_probs=65.0

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCC-------------------CCCC--CceEEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP-------------------GAGD--ANLRVF   64 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~-------------------~~~~--~~~~~i   64 (307)
                      .++..+|+|.| .|++|+++++.|...|..+++.++.+.-...++....                   ..-+  .+++.+
T Consensus         8 ~L~~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~   86 (231)
T cd00755           8 KLRNAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAV   86 (231)
T ss_pred             HHhCCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEe
Confidence            34567999999 5999999999999999988988877432222221110                   0001  134444


Q ss_pred             EcccCChhHHHHHhc-CccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           65 EADVLDSGAVSRAVE-GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        65 ~~D~~d~~~~~~~~~-~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      ...++ ++...+++. ++|+||.+...                 ...-..+.+.|++++++ +|...+
T Consensus        87 ~~~i~-~~~~~~l~~~~~D~VvdaiD~-----------------~~~k~~L~~~c~~~~ip-~I~s~g  135 (231)
T cd00755          87 EEFLT-PDNSEDLLGGDPDFVVDAIDS-----------------IRAKVALIAYCRKRKIP-VISSMG  135 (231)
T ss_pred             eeecC-HhHHHHHhcCCCCEEEEcCCC-----------------HHHHHHHHHHHHHhCCC-EEEEeC
Confidence            44443 344555553 68999887321                 22344577889988864 655444

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=97.18  E-value=0.008  Score=48.52  Aligned_cols=102  Identities=15%  Similarity=0.115  Sum_probs=63.7

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-----------------------cCCCCCCCceEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-----------------------ALPGAGDANLRV   63 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-----------------------~~~~~~~~~~~~   63 (307)
                      ++.++|+|.|+ |.+|.++++.|...|..++..++...-...++.                       ++.+  ..+++.
T Consensus        19 L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp--~v~i~~   95 (197)
T cd01492          19 LRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNP--RVKVSV   95 (197)
T ss_pred             HHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCC--CCEEEE
Confidence            34679999986 559999999999999988888876432222211                       1111  113444


Q ss_pred             EEcccCChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           64 FEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        64 i~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      +...+.+  ...+.++++|+||.+...                 ...-..+-+.|++.+++ +|+.++
T Consensus        96 ~~~~~~~--~~~~~~~~~dvVi~~~~~-----------------~~~~~~ln~~c~~~~ip-~i~~~~  143 (197)
T cd01492          96 DTDDISE--KPEEFFSQFDVVVATELS-----------------RAELVKINELCRKLGVK-FYATGV  143 (197)
T ss_pred             EecCccc--cHHHHHhCCCEEEECCCC-----------------HHHHHHHHHHHHHcCCC-EEEEEe
Confidence            4444432  234567888988876321                 12234566889998864 777665

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=97.17  E-value=0.0027  Score=55.01  Aligned_cols=94  Identities=18%  Similarity=0.093  Sum_probs=68.5

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      .+++|+|+|+. ++|..-++.+...|. +|++++|++++.+..+++      +...+. |-+|++..+.+-+.+|+++.+
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~l------GAd~~i-~~~~~~~~~~~~~~~d~ii~t  236 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKL------GADHVI-NSSDSDALEAVKEIADAIIDT  236 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHh------CCcEEE-EcCCchhhHHhHhhCcEEEEC
Confidence            47899999985 999999999988998 999999999888777776      333332 223666666665569999999


Q ss_pred             ccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEec
Q 021819           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (307)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iS  130 (307)
                      ++ ...                 ....++.++..|  +++.++
T Consensus       237 v~-~~~-----------------~~~~l~~l~~~G--~~v~vG  259 (339)
T COG1064         237 VG-PAT-----------------LEPSLKALRRGG--TLVLVG  259 (339)
T ss_pred             CC-hhh-----------------HHHHHHHHhcCC--EEEEEC
Confidence            87 221                 223455565554  788877

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=97.16  E-value=0.0033  Score=54.39  Aligned_cols=115  Identities=15%  Similarity=0.090  Sum_probs=71.5

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      ++|.|.|+ |.+|..++..|+..|..+|++++......+... .+....  ........+.-..+..+ ++++|+||-++
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~--~~~~~~~~i~~t~d~~~-~~~aDiVIita   77 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEAS--PVGGFDTKVTGTNNYAD-TANSDIVVITA   77 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhh--hccCCCcEEEecCCHHH-hCCCCEEEEcC
Confidence            48999996 999999999999988646888888544332111 010000  00000111211112333 58999999999


Q ss_pred             cCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEec
Q 021819           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTS  130 (307)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~iS  130 (307)
                      |.....  .....+.+..|......+++.+.+++-. .+|.+|
T Consensus        78 g~p~~~--~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~t  118 (305)
T TIGR01763        78 GLPRKP--GMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVS  118 (305)
T ss_pred             CCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            875432  2345678889999999999988877533 455554

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.15  E-value=0.0011  Score=58.91  Aligned_cols=75  Identities=15%  Similarity=0.049  Sum_probs=55.8

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      ...+++|+|+ |-+|+..++.|...|. +|++++|+....+.+....     + ..+..+..+.+.+.+.+.++|+||++
T Consensus       166 ~~~~VlViGa-G~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~-----g-~~v~~~~~~~~~l~~~l~~aDvVI~a  237 (370)
T TIGR00518       166 EPGDVTIIGG-GVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEF-----G-GRIHTRYSNAYEIEDAVKRADLLIGA  237 (370)
T ss_pred             CCceEEEEcC-CHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhc-----C-ceeEeccCCHHHHHHHHccCCEEEEc
Confidence            4568999986 8999999999999999 8999998765544332211     1 12234556777888889999999998


Q ss_pred             ccC
Q 021819           88 ASP   90 (307)
Q Consensus        88 a~~   90 (307)
                      ++.
T Consensus       238 ~~~  240 (370)
T TIGR00518       238 VLI  240 (370)
T ss_pred             ccc
Confidence            754

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.15  E-value=0.003  Score=55.83  Aligned_cols=36  Identities=22%  Similarity=0.396  Sum_probs=29.8

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (307)
                      |++|.|+||||++|+.|++.|.+....+++++.++.
T Consensus         3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~   38 (349)
T PRK08664          3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASE   38 (349)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcCh
Confidence            469999999999999999999987655788874543

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.12  E-value=0.00083  Score=60.48  Aligned_cols=77  Identities=12%  Similarity=0.078  Sum_probs=57.4

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      ..++++|+|.|+ |.+|+.+++.|.+.|..+++...|+..+.+.+.....    .     +.+...+++.+.+.++|+||
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~----~-----~~~~~~~~l~~~l~~aDiVI  247 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFR----N-----ASAHYLSELPQLIKKADIII  247 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhc----C-----CeEecHHHHHHHhccCCEEE
Confidence            356789999996 9999999999999998789999998666555443211    1     12233456778889999999


Q ss_pred             EeccCCC
Q 021819           86 HVASPCT   92 (307)
Q Consensus        86 ~~a~~~~   92 (307)
                      ++.+...
T Consensus       248 ~aT~a~~  254 (414)
T PRK13940        248 AAVNVLE  254 (414)
T ss_pred             ECcCCCC
Confidence            9987643

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.11  E-value=0.0085  Score=53.05  Aligned_cols=105  Identities=18%  Similarity=0.074  Sum_probs=68.2

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCC--------------------CC-CCCceEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP--------------------GA-GDANLRVFE   65 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~--------------------~~-~~~~~~~i~   65 (307)
                      ++..+|+|.|+ |++|+.+++.|...|..++..++.+.-...++.+..                    .. ...+++.+.
T Consensus        26 L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~  104 (355)
T PRK05597         26 LFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV  104 (355)
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence            45679999995 999999999999999988999888543332222210                    00 111445555


Q ss_pred             cccCChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           66 ADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        66 ~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      ..++. +...++++++|+||.+...                 +..-..+.++|.+.++. +|+.++
T Consensus       105 ~~i~~-~~~~~~~~~~DvVvd~~d~-----------------~~~r~~~n~~c~~~~ip-~v~~~~  151 (355)
T PRK05597        105 RRLTW-SNALDELRDADVILDGSDN-----------------FDTRHLASWAAARLGIP-HVWASI  151 (355)
T ss_pred             eecCH-HHHHHHHhCCCEEEECCCC-----------------HHHHHHHHHHHHHcCCC-EEEEEE
Confidence            55543 4456778899999998421                 12223466788888864 777654

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.11  E-value=0.0014  Score=56.41  Aligned_cols=69  Identities=17%  Similarity=0.211  Sum_probs=52.0

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      .+++++|+|. |.+|+.+++.|...|. +|++.+|++........+      +...+     +.+++.+.++++|+||++
T Consensus       151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~------G~~~~-----~~~~l~~~l~~aDiVI~t  217 (296)
T PRK08306        151 HGSNVLVLGF-GRTGMTLARTLKALGA-NVTVGARKSAHLARITEM------GLSPF-----HLSELAEEVGKIDIIFNT  217 (296)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHc------CCeee-----cHHHHHHHhCCCCEEEEC
Confidence            4789999996 8899999999999999 999999986544333322      33322     234577788899999998


Q ss_pred             cc
Q 021819           88 AS   89 (307)
Q Consensus        88 a~   89 (307)
                      ++
T Consensus       218 ~p  219 (296)
T PRK08306        218 IP  219 (296)
T ss_pred             CC
Confidence            53

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.11  E-value=0.0025  Score=56.90  Aligned_cols=105  Identities=17%  Similarity=0.120  Sum_probs=65.8

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-------------------CCCC-CC-CceEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-------------------LPGA-GD-ANLRVFE   65 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-------------------~~~~-~~-~~~~~i~   65 (307)
                      ++.++|+|.| +|++|+.+++.|...|..+++.++++.-...++.+                   .... .+ .++..+.
T Consensus       133 l~~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~  211 (376)
T PRK08762        133 LLEARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQ  211 (376)
T ss_pred             HhcCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            3467899997 58999999999999999889998885221111111                   0000 01 1333444


Q ss_pred             cccCChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           66 ADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        66 ~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      ..++ .+.+.++++++|+||++...                 ...-..+.++|.+.++ .+|+.+.
T Consensus       212 ~~~~-~~~~~~~~~~~D~Vv~~~d~-----------------~~~r~~ln~~~~~~~i-p~i~~~~  258 (376)
T PRK08762        212 ERVT-SDNVEALLQDVDVVVDGADN-----------------FPTRYLLNDACVKLGK-PLVYGAV  258 (376)
T ss_pred             ccCC-hHHHHHHHhCCCEEEECCCC-----------------HHHHHHHHHHHHHcCC-CEEEEEe
Confidence            4443 34567778899999998422                 1112346678888885 4777664

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.11  E-value=0.00063  Score=53.21  Aligned_cols=65  Identities=15%  Similarity=0.164  Sum_probs=46.8

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      |++|.+.| .|-+|+.+++.|+++|+ +|++.+|++++.+.+...      ++...       ++..++++++|+|+-+.
T Consensus         1 m~~Ig~IG-lG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~------g~~~~-------~s~~e~~~~~dvvi~~v   65 (163)
T PF03446_consen    1 MMKIGFIG-LGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEA------GAEVA-------DSPAEAAEQADVVILCV   65 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHT------TEEEE-------SSHHHHHHHBSEEEE-S
T ss_pred             CCEEEEEc-hHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHh------hhhhh-------hhhhhHhhcccceEeec
Confidence            56999999 59999999999999999 999999987666555433      32221       24556677889998874

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=97.09  E-value=0.0081  Score=51.85  Aligned_cols=102  Identities=20%  Similarity=0.194  Sum_probs=65.6

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCC-------------------CC--CCCceEEEEcccC
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP-------------------GA--GDANLRVFEADVL   69 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~-------------------~~--~~~~~~~i~~D~~   69 (307)
                      +|+|.|+ |++|..+++.|...|..++..++.+.-...++.+..                   .+  ...++..+..+++
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            5889995 999999999999999988998887543333322110                   00  0114555666666


Q ss_pred             ChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           70 DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        70 d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      +.....+.+++.|+||.+.-                 |...-..+-+.|+.+++. +|..++
T Consensus        80 ~~~~~~~f~~~~DvVv~a~D-----------------n~~ar~~in~~c~~~~ip-~I~~gt  123 (312)
T cd01489          80 DPDFNVEFFKQFDLVFNALD-----------------NLAARRHVNKMCLAADVP-LIESGT  123 (312)
T ss_pred             CccchHHHHhcCCEEEECCC-----------------CHHHHHHHHHHHHHCCCC-EEEEec
Confidence            54334466788888888731                 123345577788888754 777655

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=97.08  E-value=0.16  Score=43.54  Aligned_cols=257  Identities=12%  Similarity=0.054  Sum_probs=127.2

Q ss_pred             CcEEEEeCC-chhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHH-------HhcC
Q 021819            9 EETVCVTGA-NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSR-------AVEG   80 (307)
Q Consensus         9 ~~~ilItGa-tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~-------~~~~   80 (307)
                      ...|+|.|. +-=+++.++.-|-++|+ -|++...+.++.+.......  . .++....|..++.++..       .++.
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGF-IV~v~~~~~ed~~~ve~e~~--~-dI~~L~ld~~~~~~~~~~l~~f~~~L~~   78 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGF-IVYVTVSSAEDEKYVESEDR--P-DIRPLWLDDSDPSSIHASLSRFASLLSR   78 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCe-EEEEEeCCHHHHHHHHhccC--C-CCCCcccCCCCCcchHHHHHHHHHHhcC
Confidence            457899995 78999999999999999 89998887665554444321  1 46666667655433332       2332


Q ss_pred             c--------------cEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHH----HHHh---cCCcEEEEecCcce
Q 021819           81 C--------------KGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLE----AAKR---FGVRRVVVTSSISA  134 (307)
Q Consensus        81 ~--------------d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~----~~~~---~~~~~~v~iSS~~~  134 (307)
                      .              ..||-.-.....     ..+.+.+.+.++.|+......++    .++.   ...+-+++.-|+..
T Consensus        79 p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~s  158 (299)
T PF08643_consen   79 PHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISS  158 (299)
T ss_pred             CCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhh
Confidence            1              233333222211     12233456667777665554444    4455   33333444445433


Q ss_pred             eccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHH
Q 021819          135 IVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLL  214 (307)
Q Consensus       135 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~  214 (307)
                      -...+..           .+.     ...-+..+.+.+-+-++.. ..+++|+.++.|++.=.......           
T Consensus       159 sl~~Pfh-----------spE-----~~~~~al~~~~~~LrrEl~-~~~I~V~~i~LG~l~i~~~~~~s-----------  210 (299)
T PF08643_consen  159 SLNPPFH-----------SPE-----SIVSSALSSFFTSLRRELR-PHNIDVTQIKLGNLDIGNFGQPS-----------  210 (299)
T ss_pred             ccCCCcc-----------CHH-----HHHHHHHHHHHHHHHHHhh-hcCCceEEEEeeeeccccCCCcc-----------
Confidence            2221111           000     0123344444443333222 35799999999987322111000           


Q ss_pred             cCCCCCC-CCcccCcccHHHH--HHHHHHhhcCCCCCceEEecCCcccHHHHHHHHHHhCCCCC-CCccccCCchHHHHH
Q 021819          215 QGSKDTQ-EYHWLGAVPVKDV--AKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFP-VHRFVFQSPLRFILW  290 (307)
Q Consensus       215 ~~~~~~~-~~~~~~~i~~~dv--a~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  290 (307)
                      ..+.... +...+.|......  +..+...+......+  -....+-+++++..++..+..+.. -.......-.+...|
T Consensus       211 ~~~~~~~~~se~~~W~~~~r~lY~~~y~~~~~~~~~~~--~~~~~Gs~lr~L~~~vfd~~~~~~~~~v~y~G~Gs~~Y~~  288 (299)
T PF08643_consen  211 NYKYLSLAGSEVLAWTSIMRALYGPNYSSIQSSAIPAG--SGRGKGSSLRELHNAVFDALYGSSKGSVVYVGRGSRIYDW  288 (299)
T ss_pred             cccccccCCCCcccCchhHHhhhchhHHHHHhhccCCC--CCCCCCCHHHHHHHHHHHhhcCCCCCCEEEEcCceeHHHH
Confidence            0000000 1122333322221  112222222211111  011467788999999988883222 222334455677778


Q ss_pred             HHhhhcccc
Q 021819          291 LAIILPHEK  299 (307)
Q Consensus       291 ~~~~~~~~~  299 (307)
                      +.++.|...
T Consensus       289 ig~~~P~~l  297 (299)
T PF08643_consen  289 IGRWLPESL  297 (299)
T ss_pred             HHHHcCchh
Confidence            888877654

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.04  E-value=0.0035  Score=53.25  Aligned_cols=98  Identities=15%  Similarity=0.162  Sum_probs=68.8

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC-CCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      .++++.|+|+.| +|.-=++.-..-|. +|++++++. .+.+..+.+      +.+.+..-..|++.++++.+..|.++|
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~L------GAd~fv~~~~d~d~~~~~~~~~dg~~~  252 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSL------GADVFVDSTEDPDIMKAIMKTTDGGID  252 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhc------CcceeEEecCCHHHHHHHHHhhcCcce
Confidence            578999999988 99888888777899 999999987 444555555      555554333488888888887788888


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEec
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iS  130 (307)
                      ++.....    .           ...-++++++..|  ++|+++
T Consensus       253 ~v~~~a~----~-----------~~~~~~~~lk~~G--t~V~vg  279 (360)
T KOG0023|consen  253 TVSNLAE----H-----------ALEPLLGLLKVNG--TLVLVG  279 (360)
T ss_pred             eeeeccc----c-----------chHHHHHHhhcCC--EEEEEe
Confidence            7653211    0           0123455566554  799988

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.03  E-value=0.0015  Score=59.93  Aligned_cols=76  Identities=11%  Similarity=-0.018  Sum_probs=50.0

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCc-ccccCCCCCCCceEEEEcccCChhHHHHHhc-CccEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS-HLFALPGAGDANLRVFEADVLDSGAVSRAVE-GCKGV   84 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-~~d~v   84 (307)
                      .++++++|||++| +|...++.|++.|+ +|++.+++..... ....+...   ++.+..++  +...   .+. ++|+|
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~-~V~~~d~~~~~~~~~~~~l~~~---g~~~~~~~--~~~~---~~~~~~d~v   72 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGA-NVTVNDGKPFSENPEAQELLEE---GIKVICGS--HPLE---LLDEDFDLM   72 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCC-EEEEEcCCCccchhHHHHHHhc---CCEEEeCC--CCHH---HhcCcCCEE
Confidence            4578999999987 99999999999999 8999887543321 11212111   34444332  2222   234 48999


Q ss_pred             EEeccCCC
Q 021819           85 FHVASPCT   92 (307)
Q Consensus        85 i~~a~~~~   92 (307)
                      |+.+|+..
T Consensus        73 V~s~gi~~   80 (447)
T PRK02472         73 VKNPGIPY   80 (447)
T ss_pred             EECCCCCC
Confidence            99998754

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.03  E-value=0.003  Score=49.45  Aligned_cols=57  Identities=16%  Similarity=0.194  Sum_probs=46.9

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      ++.+++|+|+|+++.+|..+++.|.++|. +|+...|+.                           +++.+.+.++|+||
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~---------------------------~~l~~~l~~aDiVI   92 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKT---------------------------KNLKEHTKQADIVI   92 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCc---------------------------hhHHHHHhhCCEEE
Confidence            35689999999977789999999999999 787776531                           35667888999999


Q ss_pred             EeccC
Q 021819           86 HVASP   90 (307)
Q Consensus        86 ~~a~~   90 (307)
                      .+.+.
T Consensus        93 sat~~   97 (168)
T cd01080          93 VAVGK   97 (168)
T ss_pred             EcCCC
Confidence            98775

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.97  E-value=0.001  Score=56.97  Aligned_cols=78  Identities=14%  Similarity=-0.043  Sum_probs=53.7

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      ++++++|.|+ |+.|++++..|.+.|..+|+.+.|+.++.+.+.+...... .+  .  .+...+++...+.++|+|||+
T Consensus       124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~-~~--~--~~~~~~~~~~~~~~~DiVIna  197 (282)
T TIGR01809       124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVG-VI--T--RLEGDSGGLAIEKAAEVLVST  197 (282)
T ss_pred             CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcC-cc--e--eccchhhhhhcccCCCEEEEC
Confidence            4679999985 9999999999999998789999998766655543211100 11  1  122223445566789999999


Q ss_pred             ccCC
Q 021819           88 ASPC   91 (307)
Q Consensus        88 a~~~   91 (307)
                      .+..
T Consensus       198 Tp~g  201 (282)
T TIGR01809       198 VPAD  201 (282)
T ss_pred             CCCC
Confidence            7653

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.96  E-value=0.0088  Score=53.16  Aligned_cols=105  Identities=17%  Similarity=0.155  Sum_probs=67.5

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCC--------------------C-CCCCceEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP--------------------G-AGDANLRVFE   65 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~--------------------~-~~~~~~~~i~   65 (307)
                      ++..+|+|.|+ |++|+.+++.|...|..+++.++.+.-...++.+..                    . ....+++.+.
T Consensus        39 l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~  117 (370)
T PRK05600         39 LHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALR  117 (370)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEee
Confidence            44679999995 999999999999999888998887533322222110                    0 0111344555


Q ss_pred             cccCChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           66 ADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        66 ~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      ..++ ++...++++++|+||.|.-.                 +..-..+-++|.+.++. +|+.+.
T Consensus       118 ~~i~-~~~~~~~~~~~DlVid~~Dn-----------------~~~r~~in~~~~~~~iP-~v~~~~  164 (370)
T PRK05600        118 ERLT-AENAVELLNGVDLVLDGSDS-----------------FATKFLVADAAEITGTP-LVWGTV  164 (370)
T ss_pred             eecC-HHHHHHHHhCCCEEEECCCC-----------------HHHHHHHHHHHHHcCCC-EEEEEE
Confidence            5554 44566788899999988422                 22233566778888754 666553

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.96  E-value=0.0015  Score=55.85  Aligned_cols=77  Identities=18%  Similarity=0.166  Sum_probs=52.5

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      .+.++++|.|+ |+.|++++..|.+.|..+|+.++|+..+.+.+...............     .+++.+.+.++|+|||
T Consensus       125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~-----~~~~~~~~~~aDiVIn  198 (284)
T PRK12549        125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATA-----GSDLAAALAAADGLVH  198 (284)
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEe-----ccchHhhhCCCCEEEE
Confidence            34679999995 88999999999999987899999987666555432111000122221     1234456678999999


Q ss_pred             ecc
Q 021819           87 VAS   89 (307)
Q Consensus        87 ~a~   89 (307)
                      +..
T Consensus       199 aTp  201 (284)
T PRK12549        199 ATP  201 (284)
T ss_pred             CCc
Confidence            954

>PRK07877 hypothetical protein; Provisional

Probab=96.96  E-value=0.0097  Score=57.19  Aligned_cols=104  Identities=18%  Similarity=0.232  Sum_probs=70.4

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcccccCCC--------------------CCCCceEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPG--------------------AGDANLRVFE   65 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~--------------------~~~~~~~~i~   65 (307)
                      ++..+|+|.|. | +|+.++..|...|. .+++.++.+.-...++....-                    ....+++.+.
T Consensus       105 L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~  182 (722)
T PRK07877        105 LGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFT  182 (722)
T ss_pred             HhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEe
Confidence            45679999999 7 99999999999994 789888774333333322100                    0112566666


Q ss_pred             cccCChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           66 ADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        66 ~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      ..++ ++.+.++++++|+||.|.-                 |+..-..+.++|.++++. +|+-++
T Consensus       183 ~~i~-~~n~~~~l~~~DlVvD~~D-----------------~~~~R~~ln~~a~~~~iP-~i~~~~  229 (722)
T PRK07877        183 DGLT-EDNVDAFLDGLDVVVEECD-----------------SLDVKVLLREAARARRIP-VLMATS  229 (722)
T ss_pred             ccCC-HHHHHHHhcCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCC-EEEEcC
Confidence            6665 5678888999999999832                 123334566788888864 777664

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=96.94  E-value=0.012  Score=51.69  Aligned_cols=95  Identities=17%  Similarity=0.161  Sum_probs=54.3

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCC--CeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNY--TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      .++|.|.||||++|+.|++.|.++++  .++..+.......+.....      +......++ ++    +.++++|+||-
T Consensus         7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~~------~~~~~v~~~-~~----~~~~~~D~vf~   75 (344)
T PLN02383          7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTFE------GRDYTVEEL-TE----DSFDGVDIALF   75 (344)
T ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeeec------CceeEEEeC-CH----HHHcCCCEEEE
Confidence            46899999999999999999998765  2343333322211111110      212222233 22    23478999998


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcc
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS  133 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~  133 (307)
                      +++..                  .+..+...+.+.|+ ++|=.|+..
T Consensus        76 a~p~~------------------~s~~~~~~~~~~g~-~VIDlS~~f  103 (344)
T PLN02383         76 SAGGS------------------ISKKFGPIAVDKGA-VVVDNSSAF  103 (344)
T ss_pred             CCCcH------------------HHHHHHHHHHhCCC-EEEECCchh
Confidence            76542                  13344555555563 577777644

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=96.92  E-value=0.01  Score=52.81  Aligned_cols=113  Identities=14%  Similarity=0.025  Sum_probs=71.6

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCe----EEE--E--eCCCCCCccccc-CCCCC---CCceEEEEcccCChhHHHH
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTS----INA--T--VFPGSDSSHLFA-LPGAG---DANLRVFEADVLDSGAVSR   76 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~----V~~--~--~r~~~~~~~~~~-~~~~~---~~~~~~i~~D~~d~~~~~~   76 (307)
                      --||.|+|++|.+|++++-.|...+...    |..  +  +++.+..+.... +....   ..++.+ ..  .+    .+
T Consensus        44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i-~~--~~----y~  116 (387)
T TIGR01757        44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSI-GI--DP----YE  116 (387)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEE-ec--CC----HH
Confidence            3589999999999999999999887522    333  2  444444322111 00000   001111 11  12    24


Q ss_pred             HhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcC-C-cEEEEec
Q 021819           77 AVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-V-RRVVVTS  130 (307)
Q Consensus        77 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~~v~iS  130 (307)
                      .++++|+||-+||.....  .....+.+..|+...+.+.+.+.++. - ..+|.+|
T Consensus       117 ~~kdaDIVVitAG~prkp--g~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVs  170 (387)
T TIGR01757       117 VFEDADWALLIGAKPRGP--GMERADLLDINGQIFADQGKALNAVASKNCKVLVVG  170 (387)
T ss_pred             HhCCCCEEEECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcC
Confidence            568999999999975432  34567899999999999999998853 3 3455544

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.92  E-value=0.0043  Score=56.49  Aligned_cols=75  Identities=15%  Similarity=0.088  Sum_probs=52.7

Q ss_pred             cCCcEEEEeCC----------------chhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCC
Q 021819            7 KEEETVCVTGA----------------NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD   70 (307)
Q Consensus         7 ~~~~~ilItGa----------------tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d   70 (307)
                      +++|+|+||+|                ||-+|.+|++.+..+|+ +|+.+.-.- ...    .    +.+++.+..  ..
T Consensus       254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA-~VtlI~Gp~-~~~----~----p~~v~~i~V--~t  321 (475)
T PRK13982        254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGA-EVTLISGPV-DLA----D----PQGVKVIHV--ES  321 (475)
T ss_pred             cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCC-cEEEEeCCc-CCC----C----CCCceEEEe--cC
Confidence            67899999987                68999999999999999 888775321 111    0    115666654  34


Q ss_pred             hhHHHHHhc---CccEEEEeccCCCC
Q 021819           71 SGAVSRAVE---GCKGVFHVASPCTL   93 (307)
Q Consensus        71 ~~~~~~~~~---~~d~vi~~a~~~~~   93 (307)
                      .+++.+.+.   ..|++|++|+..+.
T Consensus       322 a~eM~~av~~~~~~Di~I~aAAVaDy  347 (475)
T PRK13982        322 ARQMLAAVEAALPADIAIFAAAVADW  347 (475)
T ss_pred             HHHHHHHHHhhCCCCEEEEeccccce
Confidence            445444443   37999999998765

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=96.89  E-value=0.0015  Score=61.59  Aligned_cols=70  Identities=13%  Similarity=0.183  Sum_probs=57.4

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHH-hcCccEEEEe
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHV   87 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~d~vi~~   87 (307)
                      .+++|.| .|-+|+++++.|.++|+ +|+.++.+++..+.+.+.      +...+.+|.+|++.++++ ++++|.++-+
T Consensus       418 ~hiiI~G-~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~------g~~~i~GD~~~~~~L~~a~i~~a~~viv~  488 (558)
T PRK10669        418 NHALLVG-YGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRER------GIRAVLGNAANEEIMQLAHLDCARWLLLT  488 (558)
T ss_pred             CCEEEEC-CChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHC------CCeEEEcCCCCHHHHHhcCccccCEEEEE
Confidence            4788888 59999999999999999 899999877666555443      788999999999988765 4688877765

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.87  E-value=0.0018  Score=55.06  Aligned_cols=74  Identities=14%  Similarity=0.118  Sum_probs=49.1

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      ++++++|+|+ |.+|++++..|.+.|. +|+...|+..+.+.+........ .+..+  +.   ++  ....++|+|||+
T Consensus       116 ~~k~vliiGa-Gg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~-~~~~~--~~---~~--~~~~~~DivIna  185 (270)
T TIGR00507       116 PNQRVLIIGA-GGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYG-EIQAF--SM---DE--LPLHRVDLIINA  185 (270)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcC-ceEEe--ch---hh--hcccCccEEEEC
Confidence            4679999997 8999999999999998 99999987655444333211100 12221  11   11  123578999999


Q ss_pred             ccCC
Q 021819           88 ASPC   91 (307)
Q Consensus        88 a~~~   91 (307)
                      .+..
T Consensus       186 tp~g  189 (270)
T TIGR00507       186 TSAG  189 (270)
T ss_pred             CCCC
Confidence            8764

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.85  E-value=0.018  Score=45.46  Aligned_cols=75  Identities=13%  Similarity=0.172  Sum_probs=48.6

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccC------------------CCC--CCCceEEEEcccCC
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL------------------PGA--GDANLRVFEADVLD   70 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~------------------~~~--~~~~~~~i~~D~~d   70 (307)
                      +|+|.| .|.+|+.+++.|...|..+++..+.+.-...++.+.                  ...  ...++..+...++.
T Consensus         1 ~VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~   79 (174)
T cd01487           1 KVGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE   79 (174)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence            478999 599999999999999997799888854221111100                  000  01134444444433


Q ss_pred             hhHHHHHhcCccEEEEe
Q 021819           71 SGAVSRAVEGCKGVFHV   87 (307)
Q Consensus        71 ~~~~~~~~~~~d~vi~~   87 (307)
                       +.+.+.++++|+||.+
T Consensus        80 -~~~~~~l~~~DlVi~~   95 (174)
T cd01487          80 -NNLEGLFGDCDIVVEA   95 (174)
T ss_pred             -hhHHHHhcCCCEEEEC
Confidence             4566778889999988

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.85  E-value=0.016  Score=47.92  Aligned_cols=102  Identities=16%  Similarity=0.096  Sum_probs=64.3

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCC--C------------------C-CCCceEEEEcccC
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP--G------------------A-GDANLRVFEADVL   69 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~--~------------------~-~~~~~~~i~~D~~   69 (307)
                      +|+|.| .|++|..+++.|...|..++..++.+.-...++.+..  .                  . ...++..+..++.
T Consensus         1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~   79 (234)
T cd01484           1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG   79 (234)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            478888 6999999999999999988998887433322222110  0                  0 0114555666665


Q ss_pred             ChhHH-HHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           70 DSGAV-SRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        70 d~~~~-~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      +.+.. .+.++++|+||.+.-                 |+..-..+-+.|.+.++ .+|..++
T Consensus        80 ~~~~~~~~f~~~~DvVi~a~D-----------------n~~aR~~ln~~c~~~~i-plI~~g~  124 (234)
T cd01484          80 PEQDFNDTFFEQFHIIVNALD-----------------NIIARRYVNGMLIFLIV-PLIESGT  124 (234)
T ss_pred             hhhhchHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCC-CEEEEcc
Confidence            43332 356778888888621                 23345567778888875 4777665

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.84  E-value=0.0091  Score=51.61  Aligned_cols=110  Identities=15%  Similarity=0.107  Sum_probs=72.0

Q ss_pred             EEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcccccCCCC-CC--CceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819           12 VCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGA-GD--ANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus        12 ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~-~~--~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      |.|.|+ |.+|+.++..|+.+|. .++++++++.+........... ..  ...+....  .|    .+.++++|+||.+
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~----~~~l~~aDiVIit   73 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD----YADAADADIVVIT   73 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC----HHHhCCCCEEEEc
Confidence            467886 8899999999999884 4799999876554322211000 00  01122211  12    2467899999999


Q ss_pred             ccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEec
Q 021819           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTS  130 (307)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~iS  130 (307)
                      +|.....  .......+..|+...+.+.+.+++++-+ .++.+|
T Consensus        74 ag~p~~~--~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~s  115 (300)
T cd00300          74 AGAPRKP--GETRLDLINRNAPILRSVITNLKKYGPDAIILVVS  115 (300)
T ss_pred             CCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            9975432  2345788889999999999999988643 344444

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.83  E-value=0.0017  Score=52.62  Aligned_cols=69  Identities=19%  Similarity=0.126  Sum_probs=47.0

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHh-cCccEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV-EGCKGVF   85 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~-~~~d~vi   85 (307)
                      .++|+++|+|. |.+|+++++.|.+.|+ +|++.+++....+.+....     +...+  |   .+   +++ .++|+++
T Consensus        26 l~gk~v~I~G~-G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~-----g~~~v--~---~~---~l~~~~~Dv~v   90 (200)
T cd01075          26 LEGKTVAVQGL-GKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELF-----GATVV--A---PE---EIYSVDADVFA   90 (200)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHc-----CCEEE--c---ch---hhccccCCEEE
Confidence            45789999997 7899999999999999 8988887654433332210     12222  1   12   233 2799999


Q ss_pred             EeccC
Q 021819           86 HVASP   90 (307)
Q Consensus        86 ~~a~~   90 (307)
                      .+|..
T Consensus        91 p~A~~   95 (200)
T cd01075          91 PCALG   95 (200)
T ss_pred             ecccc
Confidence            88753

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.82  E-value=0.024  Score=52.01  Aligned_cols=121  Identities=15%  Similarity=0.062  Sum_probs=69.2

Q ss_pred             EeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEeccCCCC
Q 021819           14 VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTL   93 (307)
Q Consensus        14 ItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a~~~~~   93 (307)
                      |+||+|.+|.++++.|...|. +|++..+.+.+.......      ++..+..|.+..++..++.               
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~------~~~~~~~d~~~~~~~~~l~---------------  100 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGD------RFGALVFDATGITDPADLK---------------  100 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCC------cccEEEEECCCCCCHHHHH---------------
Confidence            889999999999999999999 898876544321111100      3333334444333222211               


Q ss_pred             CCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHH
Q 021819           94 EDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEK  173 (307)
Q Consensus        94 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~  173 (307)
                              ..    .......++.+..  .++||+++|.....   ..                    ..|+.+|...+.
T Consensus       101 --------~~----~~~~~~~l~~l~~--~griv~i~s~~~~~---~~--------------------~~~~~akaal~g  143 (450)
T PRK08261        101 --------AL----YEFFHPVLRSLAP--CGRVVVLGRPPEAA---AD--------------------PAAAAAQRALEG  143 (450)
T ss_pred             --------HH----HHHHHHHHHhccC--CCEEEEEccccccC---Cc--------------------hHHHHHHHHHHH
Confidence                    00    0112222333322  35899999855421   11                    237777777777


Q ss_pred             HHHHHHHh--cCCcEEEEecCc
Q 021819          174 AAWEFAEK--HGVDVVAIHPAT  193 (307)
Q Consensus       174 ~~~~~~~~--~~i~~~ivrp~~  193 (307)
                      +.+.++++  .++.++.+.|+.
T Consensus       144 l~rsla~E~~~gi~v~~i~~~~  165 (450)
T PRK08261        144 FTRSLGKELRRGATAQLVYVAP  165 (450)
T ss_pred             HHHHHHHHhhcCCEEEEEecCC
Confidence            77766655  378888887763

>PLN00203 glutamyl-tRNA reductase

Probab=96.82  E-value=0.0019  Score=59.69  Aligned_cols=76  Identities=20%  Similarity=0.173  Sum_probs=54.8

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      +.+++|+|.|+ |.+|+.+++.|...|..+|+++.|+....+.+.....    ++..   .+.+.+++.+++.++|+||.
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~----g~~i---~~~~~~dl~~al~~aDVVIs  335 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP----DVEI---IYKPLDEMLACAAEADVVFT  335 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC----CCce---EeecHhhHHHHHhcCCEEEE
Confidence            45789999997 9999999999999997689999998766555543211    1111   12233456677889999999


Q ss_pred             eccC
Q 021819           87 VASP   90 (307)
Q Consensus        87 ~a~~   90 (307)
                      +.+.
T Consensus       336 AT~s  339 (519)
T PLN00203        336 STSS  339 (519)
T ss_pred             ccCC
Confidence            8654

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.82  E-value=0.019  Score=51.55  Aligned_cols=104  Identities=18%  Similarity=0.090  Sum_probs=66.3

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCC-------------------CCCC--CceEEEEc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP-------------------GAGD--ANLRVFEA   66 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~-------------------~~~~--~~~~~i~~   66 (307)
                      +..+|+|.| .|++|+.+++.|...|..++..++.+.-...++.+..                   ..-+  .++..+..
T Consensus        41 ~~~~VlviG-~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~  119 (392)
T PRK07878         41 KNARVLVIG-AGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEF  119 (392)
T ss_pred             hcCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEec
Confidence            467999999 5999999999999999988888877433322222110                   0001  13444555


Q ss_pred             ccCChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           67 DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        67 D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      .++. +...++++++|+||.+..-                 +..-..+-++|.+.++ .+|+.+.
T Consensus       120 ~i~~-~~~~~~~~~~D~Vvd~~d~-----------------~~~r~~ln~~~~~~~~-p~v~~~~  165 (392)
T PRK07878        120 RLDP-SNAVELFSQYDLILDGTDN-----------------FATRYLVNDAAVLAGK-PYVWGSI  165 (392)
T ss_pred             cCCh-hHHHHHHhcCCEEEECCCC-----------------HHHHHHHHHHHHHcCC-CEEEEEe
Confidence            5543 4456778889999887321                 2223346678888875 4777664

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.81  E-value=0.0019  Score=56.17  Aligned_cols=73  Identities=15%  Similarity=0.111  Sum_probs=53.3

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      ..+++|+|.|+ |-+|+.+++.|...|..+|++.+|++.+...+....     +.     +..+.+++.+.+.++|+||.
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~-----g~-----~~~~~~~~~~~l~~aDvVi~  244 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL-----GG-----NAVPLDELLELLNEADVVIS  244 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc-----CC-----eEEeHHHHHHHHhcCCEEEE
Confidence            35789999996 999999999999887658999998766554433211     22     22233457777889999999


Q ss_pred             eccC
Q 021819           87 VASP   90 (307)
Q Consensus        87 ~a~~   90 (307)
                      +.+.
T Consensus       245 at~~  248 (311)
T cd05213         245 ATGA  248 (311)
T ss_pred             CCCC
Confidence            9765

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.77  E-value=0.0035  Score=53.96  Aligned_cols=102  Identities=15%  Similarity=0.157  Sum_probs=57.1

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      |+||.|.||+|+-|..|++.|.....-++.....+......+........ +..-.....-|++.+  ..++||+||.+-
T Consensus         2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~~~~p~l~-g~~~l~~~~~~~~~~--~~~~~DvvFlal   78 (349)
T COG0002           2 MIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAGKPVSDVHPNLR-GLVDLPFQTIDPEKI--ELDECDVVFLAL   78 (349)
T ss_pred             CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhhcCCchHHhCcccc-cccccccccCChhhh--hcccCCEEEEec
Confidence            56999999999999999999998865466665554422222222211000 110011122233323  355799999884


Q ss_pred             cCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCc
Q 021819           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (307)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~  132 (307)
                      .-.                  .+..++....+.|+ ++|=.|..
T Consensus        79 Phg------------------~s~~~v~~l~~~g~-~VIDLSad  103 (349)
T COG0002          79 PHG------------------VSAELVPELLEAGC-KVIDLSAD  103 (349)
T ss_pred             Cch------------------hHHHHHHHHHhCCC-eEEECCcc
Confidence            321                  13345555555564 47777753

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.74  E-value=0.0062  Score=51.94  Aligned_cols=57  Identities=14%  Similarity=0.189  Sum_probs=45.8

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      +.++|+++|.|++|.+|+.++..|+++|. .|+...|+                           ...+.+.++++|+||
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~---------------------------t~~L~~~~~~aDIvI  207 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSR---------------------------TQNLPELVKQADIIV  207 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCC---------------------------chhHHHHhccCCEEE
Confidence            35689999999999999999999999999 88876541                           123555668999999


Q ss_pred             EeccC
Q 021819           86 HVASP   90 (307)
Q Consensus        86 ~~a~~   90 (307)
                      ++.|.
T Consensus       208 ~AtG~  212 (283)
T PRK14192        208 GAVGK  212 (283)
T ss_pred             EccCC
Confidence            99863

>KOG2018 consensus Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis [Posttranslational modification, protein turnover, chaperones]

Probab=96.72  E-value=0.016  Score=48.89  Aligned_cols=42  Identities=24%  Similarity=0.411  Sum_probs=31.8

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   46 (307)
                      |...++.-|+|.| +|++|++++..|++.|+..+..++...-.
T Consensus        69 m~kl~~syVVVVG-~GgVGSwv~nmL~RSG~qKi~iVDfdqVS  110 (430)
T KOG2018|consen   69 MEKLTNSYVVVVG-AGGVGSWVANMLLRSGVQKIRIVDFDQVS  110 (430)
T ss_pred             HHHhcCcEEEEEe-cCchhHHHHHHHHHhcCceEEEechhhcc
Confidence            4444555677777 59999999999999998778777664433

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.72  E-value=0.0025  Score=51.06  Aligned_cols=68  Identities=15%  Similarity=0.074  Sum_probs=43.3

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC-cccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      ||++.| ||+|.||+.|++.|.+.|+ +|+...|+.++. .......     ...     + ...+..++.+.+|+||-.
T Consensus         1 m~~~~i-~GtGniG~alA~~~a~ag~-eV~igs~r~~~~~~a~a~~l-----~~~-----i-~~~~~~dA~~~aDVVvLA   67 (211)
T COG2085           1 MMIIAI-IGTGNIGSALALRLAKAGH-EVIIGSSRGPKALAAAAAAL-----GPL-----I-TGGSNEDAAALADVVVLA   67 (211)
T ss_pred             CcEEEE-eccChHHHHHHHHHHhCCC-eEEEecCCChhHHHHHHHhh-----ccc-----c-ccCChHHHHhcCCEEEEe
Confidence            345555 5589999999999999999 777665554443 2222211     111     1 223455677889999987


Q ss_pred             cc
Q 021819           88 AS   89 (307)
Q Consensus        88 a~   89 (307)
                      ..
T Consensus        68 VP   69 (211)
T COG2085          68 VP   69 (211)
T ss_pred             cc
Confidence            54

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=96.71  E-value=0.0078  Score=49.13  Aligned_cols=107  Identities=19%  Similarity=0.276  Sum_probs=65.5

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-------------------cCCCCCCCceEEEEc-
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-------------------ALPGAGDANLRVFEA-   66 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-------------------~~~~~~~~~~~~i~~-   66 (307)
                      ++..+|+|.|. |++|+..++.|.+.|..++..++-+.-...++.                   +.....++..++... 
T Consensus        28 l~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~  106 (263)
T COG1179          28 LKQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIN  106 (263)
T ss_pred             HhhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehH
Confidence            44568999995 999999999999999878888765322211111                   100111113333332 


Q ss_pred             ccCChhHHHHHhc-CccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcce
Q 021819           67 DVLDSGAVSRAVE-GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISA  134 (307)
Q Consensus        67 D~~d~~~~~~~~~-~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~  134 (307)
                      |.-.++.+.+++. +.|+||.+.-                 |+..-..|+..|..++++   +|||+++
T Consensus       107 ~f~t~en~~~~~~~~~DyvIDaiD-----------------~v~~Kv~Li~~c~~~ki~---vIss~Ga  155 (263)
T COG1179         107 DFITEENLEDLLSKGFDYVIDAID-----------------SVRAKVALIAYCRRNKIP---VISSMGA  155 (263)
T ss_pred             hhhCHhHHHHHhcCCCCEEEEchh-----------------hhHHHHHHHHHHHHcCCC---EEeeccc
Confidence            3345566666664 5888888731                 233455788999998763   5566443

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=96.70  E-value=0.0053  Score=58.34  Aligned_cols=71  Identities=17%  Similarity=0.189  Sum_probs=58.9

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHH-hcCccEEEEec
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHVA   88 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~d~vi~~a   88 (307)
                      .+|+|.| .|-+|+.+++.|.++|+ ++++++++++..+.+.+.      +...+.+|.+|++.++++ ++++|.+|-+.
T Consensus       401 ~~vII~G-~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~------g~~v~~GDat~~~~L~~agi~~A~~vv~~~  472 (601)
T PRK03659        401 PQVIIVG-FGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKY------GYKVYYGDATQLELLRAAGAEKAEAIVITC  472 (601)
T ss_pred             CCEEEec-CchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhC------CCeEEEeeCCCHHHHHhcCCccCCEEEEEe
Confidence            5788888 59999999999999999 899999887666555443      678999999999988875 56889888773

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.70  E-value=0.016  Score=47.09  Aligned_cols=98  Identities=20%  Similarity=0.107  Sum_probs=63.4

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccE
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~   83 (307)
                      |-++++++|+|.|| |-+|..-++.|++.|. +|++++....  +.+..+...+  ++.++..+....     .+++++.
T Consensus         4 ~l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga-~VtVvsp~~~--~~l~~l~~~~--~i~~~~~~~~~~-----dl~~~~l   72 (205)
T TIGR01470         4 FANLEGRAVLVVGG-GDVALRKARLLLKAGA-QLRVIAEELE--SELTLLAEQG--GITWLARCFDAD-----ILEGAFL   72 (205)
T ss_pred             EEEcCCCeEEEECc-CHHHHHHHHHHHHCCC-EEEEEcCCCC--HHHHHHHHcC--CEEEEeCCCCHH-----HhCCcEE
Confidence            34567899999996 9999999999999999 8887765332  2222221111  688888876532     3578888


Q ss_pred             EEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      ||-+.+..             +    -...+.+.|++.+  ..|++.+
T Consensus        73 Vi~at~d~-------------~----ln~~i~~~a~~~~--ilvn~~d  101 (205)
T TIGR01470        73 VIAATDDE-------------E----LNRRVAHAARARG--VPVNVVD  101 (205)
T ss_pred             EEECCCCH-------------H----HHHHHHHHHHHcC--CEEEECC
Confidence            87653221             0    1235777777765  3555444

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.69  E-value=0.0025  Score=54.50  Aligned_cols=80  Identities=14%  Similarity=0.204  Sum_probs=52.5

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      .++++++|.|+ |+.|++++-.|.+.|..+|+++.|+.++.+.+........ +...+.  ..+...+.+.+.++|+|||
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~-~~~~~~--~~~~~~~~~~~~~~divIN  200 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAV-GREAVV--GVDARGIEDVIAAADGVVN  200 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-CcceEE--ecCHhHHHHHHhhcCEEEE
Confidence            34679999996 9999999999999998789999998766655543211000 101111  1222233444567999999


Q ss_pred             eccC
Q 021819           87 VASP   90 (307)
Q Consensus        87 ~a~~   90 (307)
                      +...
T Consensus       201 aTp~  204 (283)
T PRK14027        201 ATPM  204 (283)
T ss_pred             cCCC
Confidence            9764

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.69  E-value=0.0028  Score=57.73  Aligned_cols=68  Identities=12%  Similarity=0.175  Sum_probs=46.8

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEecc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a~   89 (307)
                      |+|.|+||+|.+|..+++.|.+.|+ +|++.+|++..........     ++.     ..  .+..+.+.++|+||-+..
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~-~V~v~~r~~~~~~~~a~~~-----gv~-----~~--~~~~e~~~~aDvVIlavp   67 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGF-EVIVTGRDPKKGKEVAKEL-----GVE-----YA--NDNIDAAKDADIVIISVP   67 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHc-----CCe-----ec--cCHHHHhccCCEEEEecC
Confidence            3799999999999999999999999 8999998765432221110     221     11  123455678899888864


Q ss_pred             C
Q 021819           90 P   90 (307)
Q Consensus        90 ~   90 (307)
                      .
T Consensus        68 ~   68 (437)
T PRK08655         68 I   68 (437)
T ss_pred             H
Confidence            3

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.69  E-value=0.0031  Score=50.07  Aligned_cols=70  Identities=13%  Similarity=0.031  Sum_probs=49.4

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      +..+++|.|.| .|-||+++++.|..-|. +|++.+|+..........      .+        ...++.++++++|+|+
T Consensus        33 ~l~g~tvgIiG-~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~------~~--------~~~~l~ell~~aDiv~   96 (178)
T PF02826_consen   33 ELRGKTVGIIG-YGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEF------GV--------EYVSLDELLAQADIVS   96 (178)
T ss_dssp             -STTSEEEEES-TSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHT------TE--------EESSHHHHHHH-SEEE
T ss_pred             ccCCCEEEEEE-EcCCcCeEeeeeecCCc-eeEEecccCChhhhcccc------cc--------eeeehhhhcchhhhhh
Confidence            46789999999 69999999999999999 999999976544311111      11        2235778889999999


Q ss_pred             EeccCC
Q 021819           86 HVASPC   91 (307)
Q Consensus        86 ~~a~~~   91 (307)
                      .+....
T Consensus        97 ~~~plt  102 (178)
T PF02826_consen   97 LHLPLT  102 (178)
T ss_dssp             E-SSSS
T ss_pred             hhhccc
Confidence            887653

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.67  E-value=0.0058  Score=52.38  Aligned_cols=81  Identities=15%  Similarity=0.054  Sum_probs=51.2

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCC---CCcccccCCCC-CCCceEEEEcccCChhHHHHHhcCcc
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS---DSSHLFALPGA-GDANLRVFEADVLDSGAVSRAVEGCK   82 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~---~~~~~~~~~~~-~~~~~~~i~~D~~d~~~~~~~~~~~d   82 (307)
                      .++++++|.|+ |+.+++++..|...|..+|+++.|+..   +.+.+.+.... ....+.+  .++.+.+.+.+.+.++|
T Consensus       122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~--~~~~~~~~l~~~~~~aD  198 (288)
T PRK12749        122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTV--TDLADQQAFAEALASAD  198 (288)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEE--echhhhhhhhhhcccCC
Confidence            35679999996 666999999999999878999999754   33333221111 0001222  22222233555667899


Q ss_pred             EEEEeccC
Q 021819           83 GVFHVASP   90 (307)
Q Consensus        83 ~vi~~a~~   90 (307)
                      +|||+...
T Consensus       199 ivINaTp~  206 (288)
T PRK12749        199 ILTNGTKV  206 (288)
T ss_pred             EEEECCCC
Confidence            99998654

>PRK07411 hypothetical protein; Validated

Probab=96.65  E-value=0.019  Score=51.58  Aligned_cols=105  Identities=18%  Similarity=0.114  Sum_probs=66.9

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCC-------C--------------CCCCceEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP-------G--------------AGDANLRVFE   65 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~-------~--------------~~~~~~~~i~   65 (307)
                      ++..+|+|.| .|++|+.+++.|...|..+++.++.+.-...++.+..       .              ....+++.+.
T Consensus        36 L~~~~VlivG-~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~  114 (390)
T PRK07411         36 LKAASVLCIG-TGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYE  114 (390)
T ss_pred             HhcCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEe
Confidence            4467999999 5899999999999999988888877433332222210       0              0111455555


Q ss_pred             cccCChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           66 ADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        66 ~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      ..++. +...++++++|+||.|...                 +..-..+-++|.+.++ .+|+.+.
T Consensus       115 ~~~~~-~~~~~~~~~~D~Vvd~~d~-----------------~~~r~~ln~~~~~~~~-p~v~~~~  161 (390)
T PRK07411        115 TRLSS-ENALDILAPYDVVVDGTDN-----------------FPTRYLVNDACVLLNK-PNVYGSI  161 (390)
T ss_pred             cccCH-HhHHHHHhCCCEEEECCCC-----------------HHHHHHHHHHHHHcCC-CEEEEEE
Confidence            55544 3456778899999998422                 1222345577887774 4666553

>PRK14851 hypothetical protein; Provisional

Probab=96.65  E-value=0.036  Score=53.12  Aligned_cols=106  Identities=13%  Similarity=0.140  Sum_probs=68.6

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCC-------------------C--CCCCceEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP-------------------G--AGDANLRVFE   65 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~-------------------~--~~~~~~~~i~   65 (307)
                      ++..+|+|.| .|++|+.+++.|...|..+++.++.+.-...++....                   .  ....+++.+.
T Consensus        41 L~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~~  119 (679)
T PRK14851         41 LAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPFP  119 (679)
T ss_pred             HhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEEe
Confidence            4567999999 6999999999999999988888876432222222110                   0  0112566666


Q ss_pred             cccCChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEec
Q 021819           66 ADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (307)
Q Consensus        66 ~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iS  130 (307)
                      ..++ ++.+.++++++|+||.+.-...               +..-..+.+.|.+.++. +|+.+
T Consensus       120 ~~i~-~~n~~~~l~~~DvVid~~D~~~---------------~~~r~~l~~~c~~~~iP-~i~~g  167 (679)
T PRK14851        120 AGIN-ADNMDAFLDGVDVVLDGLDFFQ---------------FEIRRTLFNMAREKGIP-VITAG  167 (679)
T ss_pred             cCCC-hHHHHHHHhCCCEEEECCCCCc---------------HHHHHHHHHHHHHCCCC-EEEee
Confidence            6775 4557788899999998742100               11233567788888765 66544

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.64  E-value=0.0037  Score=56.80  Aligned_cols=74  Identities=16%  Similarity=0.131  Sum_probs=53.8

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      ..+++|+|.|+ |.+|+.+++.|...|..+|++..|+......+....     +.     +..+.+++.+.+.++|+||.
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~-----g~-----~~~~~~~~~~~l~~aDvVI~  248 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF-----GG-----EAIPLDELPEALAEADIVIS  248 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc-----CC-----cEeeHHHHHHHhccCCEEEE
Confidence            45789999986 999999999999999768999998765544333211     11     22233556677889999999


Q ss_pred             eccCC
Q 021819           87 VASPC   91 (307)
Q Consensus        87 ~a~~~   91 (307)
                      +.+..
T Consensus       249 aT~s~  253 (423)
T PRK00045        249 STGAP  253 (423)
T ss_pred             CCCCC
Confidence            97653

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=96.62  E-value=0.01  Score=53.06  Aligned_cols=67  Identities=19%  Similarity=0.216  Sum_probs=51.5

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      |++|+|.|+ |.+|+-++..+.+.|+ +|++++.++.....  ..      -=..+.+|..|.+.+.++++.+|+|.
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~-~v~~~d~~~~~pa~--~~------ad~~~~~~~~D~~~l~~~a~~~dvit   68 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGY-KVIVLDPDPDSPAA--QV------ADEVIVADYDDVAALRELAEQCDVIT   68 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCC-EEEEEeCCCCCchh--Hh------CceEEecCCCCHHHHHHHHhcCCEEE
Confidence            568999997 7999999999999999 89888875433111  11      11355678999999999999999874

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=96.62  E-value=0.016  Score=50.69  Aligned_cols=75  Identities=19%  Similarity=0.085  Sum_probs=50.8

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHH---h--cCcc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA---V--EGCK   82 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~---~--~~~d   82 (307)
                      .+.+++|+|+++.+|..+++.+...|. +|+.+.++....+.+...      +... ..|..+.+....+   .  .++|
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~~~~~~~d  237 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKEL------GADY-VIDYRKEDFVREVRELTGKRGVD  237 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc------CCCe-EEecCChHHHHHHHHHhCCCCCc
Confidence            467999999999999999999999999 888888766544433222      1111 1344444333332   2  2589


Q ss_pred             EEEEeccC
Q 021819           83 GVFHVASP   90 (307)
Q Consensus        83 ~vi~~a~~   90 (307)
                      .++++++.
T Consensus       238 ~~i~~~g~  245 (342)
T cd08266         238 VVVEHVGA  245 (342)
T ss_pred             EEEECCcH
Confidence            99999764

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.61  E-value=0.004  Score=54.78  Aligned_cols=75  Identities=17%  Similarity=0.143  Sum_probs=50.4

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCCh----hHHHHHh-cCc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDS----GAVSRAV-EGC   81 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~----~~~~~~~-~~~   81 (307)
                      .+.+|+|+||+|.+|..+++.+...|. +|+++++++.+.+.++. +      ++..+ .|..+.    +.+.+.. .++
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~~l------Ga~~v-i~~~~~~~~~~~i~~~~~~gv  222 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKNKL------GFDDA-FNYKEEPDLDAALKRYFPNGI  222 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhc------CCcee-EEcCCcccHHHHHHHhCCCCc
Confidence            467999999999999999999888999 89988887766555544 3      22211 222221    1222222 368


Q ss_pred             cEEEEeccC
Q 021819           82 KGVFHVASP   90 (307)
Q Consensus        82 d~vi~~a~~   90 (307)
                      |+++++.|.
T Consensus       223 d~v~d~~g~  231 (338)
T cd08295         223 DIYFDNVGG  231 (338)
T ss_pred             EEEEECCCH
Confidence            999998663

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.61  E-value=0.0035  Score=53.77  Aligned_cols=39  Identities=15%  Similarity=0.123  Sum_probs=33.9

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH   49 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~   49 (307)
                      +++|.|.|+ |.+|+.++..|+..|+ +|+..+++++..+.
T Consensus         5 ~~~V~ViGa-G~mG~~iA~~~a~~G~-~V~l~d~~~~~~~~   43 (286)
T PRK07819          5 IQRVGVVGA-GQMGAGIAEVCARAGV-DVLVFETTEELATA   43 (286)
T ss_pred             ccEEEEEcc-cHHHHHHHHHHHhCCC-EEEEEECCHHHHHH
Confidence            568999996 9999999999999999 99999998766543

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=96.60  E-value=0.0062  Score=54.35  Aligned_cols=34  Identities=21%  Similarity=0.329  Sum_probs=31.3

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP   43 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~   43 (307)
                      +++|.|.||.|.+|..+++.|.+.|+ .|++.+|+
T Consensus        98 ~~~I~IiGG~GlmG~slA~~l~~~G~-~V~~~d~~  131 (374)
T PRK11199         98 LRPVVIVGGKGQLGRLFAKMLTLSGY-QVRILEQD  131 (374)
T ss_pred             cceEEEEcCCChhhHHHHHHHHHCCC-eEEEeCCC
Confidence            57999999999999999999999999 89998874

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=96.58  E-value=0.023  Score=47.20  Aligned_cols=36  Identities=31%  Similarity=0.433  Sum_probs=28.1

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeE-EEEeCCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSI-NATVFPG   44 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V-~~~~r~~   44 (307)
                      |++|.|.|++|-+|+.|++.+.+.+..++ -+++|.+
T Consensus         2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~   38 (266)
T COG0289           2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPG   38 (266)
T ss_pred             CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCC
Confidence            56999999999999999999998863244 4455544

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.56  E-value=0.0095  Score=50.61  Aligned_cols=58  Identities=16%  Similarity=0.181  Sum_probs=47.4

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      ++++++++|+|.++.+|+.++..|..+|. .|+...++.                           ..+.+.++++|+||
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t---------------------------~~l~~~~~~ADIVI  206 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRS---------------------------KDMASYLKDADVIV  206 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc---------------------------hhHHHHHhhCCEEE
Confidence            35789999999999999999999999999 777665421                           24667788999999


Q ss_pred             EeccCC
Q 021819           86 HVASPC   91 (307)
Q Consensus        86 ~~a~~~   91 (307)
                      .++|..
T Consensus       207 sAvg~p  212 (286)
T PRK14175        207 SAVGKP  212 (286)
T ss_pred             ECCCCC
Confidence            998764

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.56  E-value=0.013  Score=47.40  Aligned_cols=79  Identities=15%  Similarity=0.213  Sum_probs=52.5

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccC------CCC--------------CCCceEEEEc
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL------PGA--------------GDANLRVFEA   66 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~------~~~--------------~~~~~~~i~~   66 (307)
                      ++.++|+|.|+ |.+|+.++..|...|..+++..+++.-...++.+.      ...              ...++..+..
T Consensus        19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~   97 (200)
T TIGR02354        19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDE   97 (200)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeee
Confidence            45679999996 88999999999999997799988862222111110      000              0113445555


Q ss_pred             ccCChhHHHHHhcCccEEEEe
Q 021819           67 DVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus        67 D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      +++ .+.+.++++++|+||.+
T Consensus        98 ~i~-~~~~~~~~~~~DlVi~a  117 (200)
T TIGR02354        98 KIT-EENIDKFFKDADIVCEA  117 (200)
T ss_pred             eCC-HhHHHHHhcCCCEEEEC
Confidence            554 35577788889999987

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK14852 hypothetical protein; Provisional

Probab=96.52  E-value=0.044  Score=54.08  Aligned_cols=107  Identities=14%  Similarity=0.140  Sum_probs=68.9

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCC-------------------CC--CCCceEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP-------------------GA--GDANLRVFE   65 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~-------------------~~--~~~~~~~i~   65 (307)
                      ++..+|+|.| .|++|+.+++.|...|..+++.++.+.-...++....                   ..  ...+++.+.
T Consensus       330 L~~srVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~~  408 (989)
T PRK14852        330 LLRSRVAIAG-LGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSFP  408 (989)
T ss_pred             HhcCcEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEEe
Confidence            4567999999 6999999999999999988888876433332222210                   00  111455555


Q ss_pred             cccCChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           66 ADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        66 ~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      ..+ +++.+.++++++|+||.+.-...               +..-..+.+.|.+.++. +|+.++
T Consensus       409 ~~I-~~en~~~fl~~~DiVVDa~D~~~---------------~~~rr~l~~~c~~~~IP-~I~ag~  457 (989)
T PRK14852        409 EGV-AAETIDAFLKDVDLLVDGIDFFA---------------LDIRRRLFNRALELGIP-VITAGP  457 (989)
T ss_pred             cCC-CHHHHHHHhhCCCEEEECCCCcc---------------HHHHHHHHHHHHHcCCC-EEEeec
Confidence            555 44567788899999998742210               11234566778888864 776554

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.51  E-value=0.0059  Score=55.35  Aligned_cols=73  Identities=14%  Similarity=0.074  Sum_probs=53.0

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      ..+++++|.|+ |.+|+.+++.|...|..+|++.+|+......+....     +...+     +.+++.+.+.++|+||.
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~-----g~~~i-----~~~~l~~~l~~aDvVi~  246 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL-----GGEAV-----KFEDLEEYLAEADIVIS  246 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc-----CCeEe-----eHHHHHHHHhhCCEEEE
Confidence            45689999996 999999999999999558999999765544332211     11122     23467777889999999


Q ss_pred             eccC
Q 021819           87 VASP   90 (307)
Q Consensus        87 ~a~~   90 (307)
                      +.+.
T Consensus       247 aT~s  250 (417)
T TIGR01035       247 STGA  250 (417)
T ss_pred             CCCC
Confidence            9664

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.49  E-value=0.0052  Score=54.76  Aligned_cols=75  Identities=20%  Similarity=0.201  Sum_probs=60.6

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      ++.++++|.|+ |=+|.-++++|.++|..+|+...|+..+...+...       +.   ++....+++...+..+|+||.
T Consensus       176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~-------~~---~~~~~l~el~~~l~~~DvVis  244 (414)
T COG0373         176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKK-------LG---AEAVALEELLEALAEADVVIS  244 (414)
T ss_pred             cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHH-------hC---CeeecHHHHHHhhhhCCEEEE
Confidence            56789999996 99999999999999987999999987777655442       21   555666788899999999999


Q ss_pred             eccCCC
Q 021819           87 VASPCT   92 (307)
Q Consensus        87 ~a~~~~   92 (307)
                      +.+...
T Consensus       245 sTsa~~  250 (414)
T COG0373         245 STSAPH  250 (414)
T ss_pred             ecCCCc
Confidence            976643

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=96.49  E-value=0.011  Score=51.15  Aligned_cols=110  Identities=15%  Similarity=0.112  Sum_probs=68.2

Q ss_pred             EEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc----cCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF----ALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus        12 ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      |.|.|+ |.+|+.++..|+.+|..+|+.++++++......    ..........+ +... +|   . +.++++|+||.+
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~-I~~t-~d---~-~~l~dADiVIit   73 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTK-VTGT-ND---Y-EDIAGSDVVVIT   73 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeE-EEEc-CC---H-HHhCCCCEEEEe
Confidence            468898 999999999998887438999998765432111    10000000111 1110 12   2 246899999999


Q ss_pred             ccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcE-EEEec
Q 021819           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR-VVVTS  130 (307)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~iS  130 (307)
                      ++.....  .....+.+..|+.-.+.+++.+.+..-.. +|.+|
T Consensus        74 ~g~p~~~--~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s  115 (300)
T cd01339          74 AGIPRKP--GMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVT  115 (300)
T ss_pred             cCCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9864432  23344577788888888988888876444 44444

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=96.49  E-value=0.044  Score=45.89  Aligned_cols=97  Identities=19%  Similarity=0.238  Sum_probs=67.5

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEEEEe
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFHV   87 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~vi~~   87 (307)
                      |+|+|.|||+ =|+.|++.|.++|+ .++.+..+- ..+....    .........+-+.+.+++.+.++  ++++||..
T Consensus         1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~t~~-g~~~~~~----~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDA   73 (249)
T PF02571_consen    1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVATSY-GGELLKP----ELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDA   73 (249)
T ss_pred             CEEEEEechH-HHHHHHHHHHhcCC-EEEEEEhhh-hHhhhcc----ccCCceEEECCCCCHHHHHHHHHhCCCcEEEEC
Confidence            5899999975 69999999999997 333333321 1111111    00145677788889999999985  79999998


Q ss_pred             ccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEE
Q 021819           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV  128 (307)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  128 (307)
                      ...+.               ...+.++.++|++.|+..+-|
T Consensus        74 THPfA---------------~~is~na~~a~~~~~ipylR~   99 (249)
T PF02571_consen   74 THPFA---------------AEISQNAIEACRELGIPYLRF   99 (249)
T ss_pred             CCchH---------------HHHHHHHHHHHhhcCcceEEE
Confidence            76543               234788999999998765544

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=96.47  E-value=0.027  Score=49.61  Aligned_cols=33  Identities=33%  Similarity=0.486  Sum_probs=27.1

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeC
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVF   42 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r   42 (307)
                      ++|.|+|++|++|++|++.|.+.+..+|..+..
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~   33 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVA   33 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEE
Confidence            379999999999999999998876437777743

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=96.45  E-value=0.0092  Score=54.06  Aligned_cols=79  Identities=13%  Similarity=0.144  Sum_probs=48.6

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCC-CCCCceE-----EE-EcccCChhHHHHHhcCccE
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG-AGDANLR-----VF-EADVLDSGAVSRAVEGCKG   83 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~-----~i-~~D~~d~~~~~~~~~~~d~   83 (307)
                      +|.|.| .|++|..++..|.+.|+ +|+++++++...+.+..-.. ....++.     .+ .+.++-..+..++++++|+
T Consensus         2 kI~vIG-lG~~G~~lA~~La~~G~-~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~adv   79 (411)
T TIGR03026         2 KIAVIG-LGYVGLPLAALLADLGH-EVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADV   79 (411)
T ss_pred             EEEEEC-CCchhHHHHHHHHhcCC-eEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCE
Confidence            688898 69999999999999999 89999997665544332100 0000000     00 0101111234456788999


Q ss_pred             EEEeccCC
Q 021819           84 VFHVASPC   91 (307)
Q Consensus        84 vi~~a~~~   91 (307)
                      ||-+.+..
T Consensus        80 vii~vpt~   87 (411)
T TIGR03026        80 IIICVPTP   87 (411)
T ss_pred             EEEEeCCC
Confidence            99997753

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.44  E-value=0.0061  Score=53.32  Aligned_cols=75  Identities=20%  Similarity=0.158  Sum_probs=49.5

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChh---HHHHHhc--Ccc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AVSRAVE--GCK   82 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~---~~~~~~~--~~d   82 (307)
                      .+.+|||+||+|.+|+..++.+...|. .+++...++.+.+.++.+.      ...+ .|..+.+   .+.++..  ++|
T Consensus       142 ~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lG------Ad~v-i~y~~~~~~~~v~~~t~g~gvD  213 (326)
T COG0604         142 PGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELG------ADHV-INYREEDFVEQVRELTGGKGVD  213 (326)
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcC------CCEE-EcCCcccHHHHHHHHcCCCCce
Confidence            367999999999999999999999997 5666666555544555542      2111 2233322   2333332  589


Q ss_pred             EEEEeccC
Q 021819           83 GVFHVASP   90 (307)
Q Consensus        83 ~vi~~a~~   90 (307)
                      +|+...|.
T Consensus       214 vv~D~vG~  221 (326)
T COG0604         214 VVLDTVGG  221 (326)
T ss_pred             EEEECCCH
Confidence            99999775

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.43  E-value=0.011  Score=50.46  Aligned_cols=58  Identities=12%  Similarity=0.131  Sum_probs=46.6

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      +.++|+|.|.|.+|.+|+.++..|+++|+ .|+...+...                           .+.++.+++|+||
T Consensus       156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~---------------------------~l~e~~~~ADIVI  207 (301)
T PRK14194        156 DLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST---------------------------DAKALCRQADIVV  207 (301)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC---------------------------CHHHHHhcCCEEE
Confidence            35689999999999999999999999999 8887754311                           3556677889998


Q ss_pred             EeccCC
Q 021819           86 HVASPC   91 (307)
Q Consensus        86 ~~a~~~   91 (307)
                      -+.|..
T Consensus       208 savg~~  213 (301)
T PRK14194        208 AAVGRP  213 (301)
T ss_pred             EecCCh
Confidence            887764

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.40  E-value=0.017  Score=44.76  Aligned_cols=68  Identities=12%  Similarity=0.163  Sum_probs=45.1

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      ++++++|+|.|| |-+|...++.|++.|+ +|+.+.  +...+.+..+.     .+.+..-.+...     -++++|.||
T Consensus        10 ~l~~~~vlVvGG-G~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~-----~i~~~~~~~~~~-----dl~~a~lVi   75 (157)
T PRK06719         10 NLHNKVVVIIGG-GKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELP-----YITWKQKTFSND-----DIKDAHLIY   75 (157)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhcc-----CcEEEecccChh-----cCCCceEEE
Confidence            567899999996 9999999999999999 888773  33333333321     344443333221     246778777


Q ss_pred             Ee
Q 021819           86 HV   87 (307)
Q Consensus        86 ~~   87 (307)
                      -+
T Consensus        76 aa   77 (157)
T PRK06719         76 AA   77 (157)
T ss_pred             EC
Confidence            65

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.40  E-value=0.0034  Score=51.64  Aligned_cols=38  Identities=18%  Similarity=0.092  Sum_probs=33.1

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS   48 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~   48 (307)
                      |+|.|+||+|.+|+.+++.|.+.|+ +|...+|+++..+
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~-~V~v~~r~~~~~~   38 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGN-KIIIGSRDLEKAE   38 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCC-EEEEEEcCHHHHH
Confidence            3799999999999999999999998 8988888765543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.39  E-value=0.005  Score=52.31  Aligned_cols=76  Identities=16%  Similarity=0.106  Sum_probs=52.0

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEE-cccCChhHHHHHhcCccEEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFE-ADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~-~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      ++++++|.|| |+.+++++..|++.|..+|+++.|+.++.+.+........   ..+. .+..+.+...    ..|+|||
T Consensus       125 ~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~---~~~~~~~~~~~~~~~----~~dliIN  196 (283)
T COG0169         125 TGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELG---AAVEAAALADLEGLE----EADLLIN  196 (283)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc---ccccccccccccccc----ccCEEEE
Confidence            4689999995 9999999999999997789999998877776655432111   0111 1222222111    7899999


Q ss_pred             eccCC
Q 021819           87 VASPC   91 (307)
Q Consensus        87 ~a~~~   91 (307)
                      +.+..
T Consensus       197 aTp~G  201 (283)
T COG0169         197 ATPVG  201 (283)
T ss_pred             CCCCC
Confidence            87654

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=96.39  E-value=0.0045  Score=57.78  Aligned_cols=73  Identities=12%  Similarity=-0.027  Sum_probs=48.5

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHH-hcCccEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVF   85 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~d~vi   85 (307)
                      .++++++|+|+ |++|++++..|.+.|+ +|+.+.|+.++.+.+....     +...+     +.++..+. ....|+||
T Consensus       377 ~~~k~vlIlGa-GGagrAia~~L~~~G~-~V~i~nR~~e~a~~la~~l-----~~~~~-----~~~~~~~~~~~~~diiI  444 (529)
T PLN02520        377 LAGKLFVVIGA-GGAGKALAYGAKEKGA-RVVIANRTYERAKELADAV-----GGQAL-----TLADLENFHPEEGMILA  444 (529)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHh-----CCcee-----eHhHhhhhccccCeEEE
Confidence            34679999998 8999999999999999 8999988765544443211     11111     11222222 23578999


Q ss_pred             EeccCC
Q 021819           86 HVASPC   91 (307)
Q Consensus        86 ~~a~~~   91 (307)
                      |+.+..
T Consensus       445 NtT~vG  450 (529)
T PLN02520        445 NTTSVG  450 (529)
T ss_pred             ecccCC
Confidence            887654

>PRK06153 hypothetical protein; Provisional

Probab=96.39  E-value=0.056  Score=47.77  Aligned_cols=103  Identities=13%  Similarity=0.166  Sum_probs=65.1

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCC---------C-------------CCCCceEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP---------G-------------AGDANLRVF   64 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~---------~-------------~~~~~~~~i   64 (307)
                      ++..+|+|.| .|++|+.++..|.+.|..+++.++.+.-...++.+..         .             .-..++..+
T Consensus       174 L~~~~VaIVG-~GG~GS~Va~~LAR~GVgeI~LVD~D~Ve~SNLnRQ~gaf~~~DvGk~~~KVevaa~rl~~in~~I~~~  252 (393)
T PRK06153        174 LEGQRIAIIG-LGGTGSYILDLVAKTPVREIHLFDGDDFLQHNAFRSPGAASIEELREAPKKVDYFKSRYSNMRRGIVPH  252 (393)
T ss_pred             HhhCcEEEEc-CCccHHHHHHHHHHcCCCEEEEECCCEecccccccccccCCHhHcCCcchHHHHHHHHHHHhCCeEEEE
Confidence            4567999999 5999999999999999888888876322211111110         0             011145555


Q ss_pred             EcccCChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEec
Q 021819           65 EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (307)
Q Consensus        65 ~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iS  130 (307)
                      ...+ +++.+. .+.++|+||.|.-                 |..+-..+.+.|.+.++. +|.++
T Consensus       253 ~~~I-~~~n~~-~L~~~DiV~dcvD-----------------n~~aR~~ln~~a~~~gIP-~Id~G  298 (393)
T PRK06153        253 PEYI-DEDNVD-ELDGFTFVFVCVD-----------------KGSSRKLIVDYLEALGIP-FIDVG  298 (393)
T ss_pred             eecC-CHHHHH-HhcCCCEEEEcCC-----------------CHHHHHHHHHHHHHcCCC-EEEee
Confidence            5555 444443 5688999999843                 233344567778888764 66655

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.38  E-value=0.0058  Score=53.43  Aligned_cols=75  Identities=16%  Similarity=0.144  Sum_probs=50.4

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHH---h--cCcc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA---V--EGCK   82 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~---~--~~~d   82 (307)
                      ++.+|+|+||+|.+|..+++.+...|. +|+++++++++.+.+..+      ++..+ .|..+.+.+.+.   .  .++|
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~l------Ga~~v-i~~~~~~~~~~~~~~~~~~gvd  209 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKL------GFDVA-FNYKTVKSLEETLKKASPDGYD  209 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc------CCCEE-EeccccccHHHHHHHhCCCCeE
Confidence            467999999999999999998888899 899888876665555444      22211 122222122221   2  2589


Q ss_pred             EEEEeccC
Q 021819           83 GVFHVASP   90 (307)
Q Consensus        83 ~vi~~a~~   90 (307)
                      +++++.|.
T Consensus       210 vv~d~~G~  217 (325)
T TIGR02825       210 CYFDNVGG  217 (325)
T ss_pred             EEEECCCH
Confidence            99998764

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK06849 hypothetical protein; Provisional

Probab=96.38  E-value=0.014  Score=52.55  Aligned_cols=36  Identities=17%  Similarity=0.097  Sum_probs=32.4

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (307)
                      ++|+|||||++..+|..+++.|.+.|+ +|++++..+
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~   38 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLK   38 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCc
Confidence            357999999999999999999999999 898888764

>cd01493 APPBP1_RUB Ubiquitin activating enzyme (E1) subunit APPBP1

Probab=96.38  E-value=0.062  Score=48.62  Aligned_cols=109  Identities=16%  Similarity=0.058  Sum_probs=63.7

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-----------------------cCCCCCCCceEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-----------------------ALPGAGDANLRV   63 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-----------------------~~~~~~~~~~~~   63 (307)
                      +...+|+|.|+ |.+|..+++.|...|...++.++...-....+.                       ++.+.  ..+++
T Consensus        18 L~~s~VlliG~-gglGsEilKNLvL~GIg~~tIvD~~~V~~sDL~~nFfl~~~diGk~kA~~~~~~L~eLNp~--V~i~~   94 (425)
T cd01493          18 LESAHVCLLNA-TATGTEILKNLVLPGIGSFTIVDGSKVDEEDLGNNFFLDASSLGKSRAEATCELLQELNPD--VNGSA   94 (425)
T ss_pred             HhhCeEEEEcC-cHHHHHHHHHHHHcCCCeEEEECCCcCchhhccccccCChhhcCcHHHHHHHHHHHHHCCC--CEEEE
Confidence            34568999985 569999999999999988888876432221111                       11110  12344


Q ss_pred             EEcccCCh-hHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceecc
Q 021819           64 FEADVLDS-GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVP  137 (307)
Q Consensus        64 i~~D~~d~-~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~  137 (307)
                      +.-++.+. +...+.+++.|+||-+-.                 +......+.+.|.++++ .+|+.+|.+ +++
T Consensus        95 ~~e~~~~ll~~~~~f~~~fdiVI~t~~-----------------~~~~~~~L~~~c~~~~i-PlI~~~s~G-~~G  150 (425)
T cd01493          95 VEESPEALLDNDPSFFSQFTVVIATNL-----------------PESTLLRLADVLWSANI-PLLYVRSYG-LYG  150 (425)
T ss_pred             EecccchhhhhHHHHhcCCCEEEECCC-----------------CHHHHHHHHHHHHHcCC-CEEEEeccc-CEE
Confidence            44333221 112355677787774311                 01123456788888886 488888744 444

APPBP1 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. ABPP1 contains part of the adenylation domain.

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.37  E-value=0.017  Score=50.96  Aligned_cols=74  Identities=15%  Similarity=0.130  Sum_probs=50.8

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc---CccEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GCKGV   84 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~---~~d~v   84 (307)
                      .+.+|+|+|+ |.+|...++.+...|..+|+++++++.+.+.++++      ++..+ .|..+. ++.+..+   ++|+|
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~l------Ga~~v-i~~~~~-~~~~~~~~~g~~D~v  239 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREM------GADKL-VNPQND-DLDHYKAEKGYFDVS  239 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHc------CCcEE-ecCCcc-cHHHHhccCCCCCEE
Confidence            4679999986 99999999988888986688888887776666554      22222 233222 2333322   48999


Q ss_pred             EEeccC
Q 021819           85 FHVASP   90 (307)
Q Consensus        85 i~~a~~   90 (307)
                      |.++|.
T Consensus       240 id~~G~  245 (343)
T PRK09880        240 FEVSGH  245 (343)
T ss_pred             EECCCC
Confidence            999774

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=96.35  E-value=0.018  Score=49.68  Aligned_cols=107  Identities=15%  Similarity=0.094  Sum_probs=70.3

Q ss_pred             EeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCccccc-CCCC---CCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819           14 VTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFA-LPGA---GDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus        14 ItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~-~~~~---~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      |.| +|.+|++++..|+.++. .++..++++.+....... +...   ...++.+. .  .+    .+.++++|+||-+|
T Consensus         1 iIG-aG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~-~--~~----~~~~~daDivVita   72 (299)
T TIGR01771         1 IIG-AGNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR-S--GD----YSDCKDADLVVITA   72 (299)
T ss_pred             CCC-cCHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe-c--CC----HHHHCCCCEEEECC
Confidence            356 59999999999998875 578888886554332211 1000   00022222 1  22    24678999999999


Q ss_pred             cCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEec
Q 021819           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTS  130 (307)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~iS  130 (307)
                      |.....  -.+..+.++.|....+.+.+.+.+++-. .++.+|
T Consensus        73 g~~rk~--g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs  113 (299)
T TIGR01771        73 GAPQKP--GETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVAT  113 (299)
T ss_pred             CCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence            975542  2346789999999999999999888643 455554

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.34  E-value=0.013  Score=51.69  Aligned_cols=34  Identities=15%  Similarity=0.300  Sum_probs=25.2

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHC-CC--CeEEEEeC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDN-NY--TSINATVF   42 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~-g~--~~V~~~~r   42 (307)
                      |++|.|.||||++|+.|.+.|++. .+  .++..+..
T Consensus         1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss   37 (369)
T PRK06598          1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFST   37 (369)
T ss_pred             CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecc
Confidence            358999999999999999966665 44  12555544

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=96.32  E-value=0.019  Score=48.94  Aligned_cols=99  Identities=15%  Similarity=0.181  Sum_probs=62.1

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-----------------------CCCCCCCceEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-----------------------LPGAGDANLRV   63 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-----------------------~~~~~~~~~~~   63 (307)
                      +...+|+|.|. |++|..+++.|...|...|+..+...-...++.+                       +.+  ..+++.
T Consensus        17 L~~s~VLIvG~-gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp--~V~V~~   93 (286)
T cd01491          17 LQKSNVLISGL-GGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNP--YVPVTV   93 (286)
T ss_pred             HhcCcEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCC--CCEEEE
Confidence            34569999995 8999999999999999889888775433322221                       111  012333


Q ss_pred             EEcccCChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           64 FEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        64 i~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      +..++     ..+.+++.|+||.+..                 |......+-++|+++++ .||...+
T Consensus        94 ~~~~~-----~~~~l~~fdvVV~~~~-----------------~~~~~~~in~~c~~~~i-pfI~a~~  138 (286)
T cd01491          94 STGPL-----TTDELLKFQVVVLTDA-----------------SLEDQLKINEFCHSPGI-KFISADT  138 (286)
T ss_pred             EeccC-----CHHHHhcCCEEEEecC-----------------CHHHHHHHHHHHHHcCC-EEEEEec
Confidence            33332     1245667888877632                 12234456688998885 5777665

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.32  E-value=0.0091  Score=52.11  Aligned_cols=73  Identities=22%  Similarity=0.177  Sum_probs=48.5

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCC-hhHHHHHhcCccEEEEe
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD-SGAVSRAVEGCKGVFHV   87 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d-~~~~~~~~~~~d~vi~~   87 (307)
                      +.+++|+||+|.+|..+++.+...|. .|+++.+++...+.+..+      +...+ .|..+ .+.+.+. .++|.++++
T Consensus       163 ~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~-~~~d~v~~~  233 (332)
T cd08259         163 GDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKEL------GADYV-IDGSKFSEDVKKL-GGADVVIEL  233 (332)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHc------CCcEE-EecHHHHHHHHhc-cCCCEEEEC
Confidence            56899999999999999999999999 888888866554444322      11111 12211 1222222 378999999


Q ss_pred             ccC
Q 021819           88 ASP   90 (307)
Q Consensus        88 a~~   90 (307)
                      +|.
T Consensus       234 ~g~  236 (332)
T cd08259         234 VGS  236 (332)
T ss_pred             CCh
Confidence            764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=96.30  E-value=0.0073  Score=57.58  Aligned_cols=71  Identities=15%  Similarity=0.210  Sum_probs=58.6

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHH-hcCccEEEEec
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHVA   88 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~d~vi~~a   88 (307)
                      ++|+|.| .|-+|+.+++.|.++|. ++++++.+++..+.+.+.      +...+.+|.+|++.++++ ++++|.+|-+.
T Consensus       401 ~~vII~G-~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~------g~~v~~GDat~~~~L~~agi~~A~~vvv~~  472 (621)
T PRK03562        401 PRVIIAG-FGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKF------GMKVFYGDATRMDLLESAGAAKAEVLINAI  472 (621)
T ss_pred             CcEEEEe-cChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhc------CCeEEEEeCCCHHHHHhcCCCcCCEEEEEe
Confidence            5899999 59999999999999999 899999887766655443      678999999999988764 56889888773

>cd08230 glucose_DH Glucose dehydrogenase

Probab=96.27  E-value=0.018  Score=51.07  Aligned_cols=73  Identities=12%  Similarity=0.078  Sum_probs=47.6

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCC---CCCCcccccCCCCCCCceEEEEcccCChhHH-HHHhcCccE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP---GSDSSHLFALPGAGDANLRVFEADVLDSGAV-SRAVEGCKG   83 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~-~~~~~~~d~   83 (307)
                      .+.+|+|+|+ |.+|...++.+...|. +|++++|+   +.+.+.++.+      ++..+  |..+.+.. .....++|+
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~~------Ga~~v--~~~~~~~~~~~~~~~~d~  241 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEEL------GATYV--NSSKTPVAEVKLVGEFDL  241 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHc------CCEEe--cCCccchhhhhhcCCCCE
Confidence            4679999985 9999999998888899 89999884   3333333333      33332  32222111 112346899


Q ss_pred             EEEeccC
Q 021819           84 VFHVASP   90 (307)
Q Consensus        84 vi~~a~~   90 (307)
                      ||.++|.
T Consensus       242 vid~~g~  248 (355)
T cd08230         242 IIEATGV  248 (355)
T ss_pred             EEECcCC
Confidence            9999874

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=96.27  E-value=0.027  Score=51.05  Aligned_cols=40  Identities=18%  Similarity=0.216  Sum_probs=34.3

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL   50 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~   50 (307)
                      +++|.|.| .|++|..++..|.+.|+ +|+++++++...+.+
T Consensus         3 ~~kI~VIG-lG~~G~~~A~~La~~G~-~V~~~D~~~~~v~~l   42 (415)
T PRK11064          3 FETISVIG-LGYIGLPTAAAFASRQK-QVIGVDINQHAVDTI   42 (415)
T ss_pred             ccEEEEEC-cchhhHHHHHHHHhCCC-EEEEEeCCHHHHHHH
Confidence            46899998 69999999999999999 999999977665543

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.25  E-value=0.013  Score=50.96  Aligned_cols=78  Identities=19%  Similarity=0.115  Sum_probs=49.1

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc--------CCCCCCCceEEEEcccCChhHHHHHhcC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA--------LPGAGDANLRVFEADVLDSGAVSRAVEG   80 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~i~~D~~d~~~~~~~~~~   80 (307)
                      .++|.|.|+ |-+|+.++..|+..|+ +|++.++++...+....        +..... ........+.-..++++++++
T Consensus         7 i~~VaVIGa-G~MG~giA~~~a~aG~-~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~i~~~~~l~~av~~   83 (321)
T PRK07066          7 IKTFAAIGS-GVIGSGWVARALAHGL-DVVAWDPAPGAEAALRANVANAWPALERQGL-APGASPARLRFVATIEACVAD   83 (321)
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCC-ChhhHHhhceecCCHHHHhcC
Confidence            468999985 9999999999999999 99999997654332111        000000 000000111112246678899


Q ss_pred             ccEEEEecc
Q 021819           81 CKGVFHVAS   89 (307)
Q Consensus        81 ~d~vi~~a~   89 (307)
                      +|+|+-++.
T Consensus        84 aDlViEavp   92 (321)
T PRK07066         84 ADFIQESAP   92 (321)
T ss_pred             CCEEEECCc
Confidence            999999854

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.23  E-value=0.0049  Score=56.80  Aligned_cols=70  Identities=11%  Similarity=0.106  Sum_probs=47.4

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      ++++++|+|+ |.+|++++..|.+.|+ +|+..+|+..+.+.+....     +...  .+.   +++.. +.++|+||+|
T Consensus       331 ~~k~vlIiGa-GgiG~aia~~L~~~G~-~V~i~~R~~~~~~~la~~~-----~~~~--~~~---~~~~~-l~~~DiVIna  397 (477)
T PRK09310        331 NNQHVAIVGA-GGAAKAIATTLARAGA-ELLIFNRTKAHAEALASRC-----QGKA--FPL---ESLPE-LHRIDIIINC  397 (477)
T ss_pred             CCCEEEEEcC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh-----ccce--ech---hHhcc-cCCCCEEEEc
Confidence            4679999995 8999999999999999 8988888755444332211     1111  111   22222 4689999999


Q ss_pred             ccC
Q 021819           88 ASP   90 (307)
Q Consensus        88 a~~   90 (307)
                      ...
T Consensus       398 tP~  400 (477)
T PRK09310        398 LPP  400 (477)
T ss_pred             CCC
Confidence            764

>TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein

Probab=96.23  E-value=0.033  Score=51.89  Aligned_cols=101  Identities=21%  Similarity=0.244  Sum_probs=68.7

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC--Cc---ccccCCCCCCCceEEEEcccCChhHHHHHhcCcc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SS---HLFALPGAGDANLRVFEADVLDSGAVSRAVEGCK   82 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~--~~---~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d   82 (307)
                      +..+|+|.| +|.+|++|+..|+..|..++.+++.+...  ..   .+.+...+-++++.+-..|.++.+++.+++++.|
T Consensus       128 R~akVlVlG-~Gg~~s~lv~sL~~sG~~~I~~vd~D~v~SNlnRIgEl~e~A~~~n~~v~v~~i~~~~~~dl~ev~~~~D  206 (637)
T TIGR03693       128 RNAKILAAG-SGDFLTKLVRSLIDSGFPRFHAIVTDAEEHALDRIHELAEIAEETDDALLVQEIDFAEDQHLHEAFEPAD  206 (637)
T ss_pred             hcccEEEEe-cCchHHHHHHHHHhcCCCcEEEEeccccchhhhHHHHHHHHHHHhCCCCceEeccCCcchhHHHhhcCCc
Confidence            346899999 69999999999999998788777553321  11   1111111112256666667778889999999999


Q ss_pred             EEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc
Q 021819           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR  124 (307)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  124 (307)
                      +|++.+-...               ......+.++|.+.|..
T Consensus       207 iVi~vsDdy~---------------~~~Lr~lN~acvkegk~  233 (637)
T TIGR03693       207 WVLYVSDNGD---------------IDDLHALHAFCKEEGKG  233 (637)
T ss_pred             EEEEECCCCC---------------hHHHHHHHHHHHHcCCC
Confidence            9999864321               12255677888888744

Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.22  E-value=0.026  Score=47.45  Aligned_cols=97  Identities=16%  Similarity=0.091  Sum_probs=60.1

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHH----hcCccE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA----VEGCKG   83 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~----~~~~d~   83 (307)
                      ++.+|+|+|+++ +|..+++.+...|. +|+++++++...+.+...      +... ..|..+.+....+    -.++|.
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~------g~~~-~~~~~~~~~~~~~~~~~~~~~d~  204 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGA-RVIVTDRSDEKLELAKEL------GADH-VIDYKEEDLEEELRLTGGGGADV  204 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHh------CCce-eccCCcCCHHHHHHHhcCCCCCE
Confidence            467999999999 99999999998998 899998876554444332      1111 1233332222221    236899


Q ss_pred             EEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCc
Q 021819           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (307)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~  132 (307)
                      ++++++..                 .....+++.++..  ++++.++..
T Consensus       205 vi~~~~~~-----------------~~~~~~~~~l~~~--G~~v~~~~~  234 (271)
T cd05188         205 VIDAVGGP-----------------ETLAQALRLLRPG--GRIVVVGGT  234 (271)
T ss_pred             EEECCCCH-----------------HHHHHHHHhcccC--CEEEEEccC
Confidence            99987641                 1123344555444  478888763

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.21  E-value=0.01  Score=51.74  Aligned_cols=75  Identities=19%  Similarity=0.203  Sum_probs=51.1

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChh---HHHHHh-cCccE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AVSRAV-EGCKG   83 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~---~~~~~~-~~~d~   83 (307)
                      ++.+++|+||+|.+|..+++.+...|. +|+++.+++++.+.++.+      ++..+ .|..+++   .+.+.. .++|.
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~~l~~~------Ga~~v-i~~~~~~~~~~v~~~~~~gvd~  214 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVAWLKEL------GFDAV-FNYKTVSLEEALKEAAPDGIDC  214 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc------CCCEE-EeCCCccHHHHHHHHCCCCcEE
Confidence            467999999999999999999989999 899988877666555543      22221 2322222   222222 25899


Q ss_pred             EEEeccC
Q 021819           84 VFHVASP   90 (307)
Q Consensus        84 vi~~a~~   90 (307)
                      |+++.|.
T Consensus       215 vld~~g~  221 (329)
T cd08294         215 YFDNVGG  221 (329)
T ss_pred             EEECCCH
Confidence            9998664

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=96.21  E-value=0.028  Score=50.67  Aligned_cols=71  Identities=15%  Similarity=0.126  Sum_probs=52.3

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVF   85 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~vi   85 (307)
                      +.|+|+|+|+ |..|+.+++.+.+.|+ +|+.++.++......  ..     . ..+..|..|.+.+.++++  ++|.|+
T Consensus        11 ~~~~ilIiG~-g~~~~~~~~a~~~~G~-~v~~~~~~~~~~~~~--~a-----d-~~~~~~~~d~~~l~~~~~~~~id~vi   80 (395)
T PRK09288         11 SATRVMLLGS-GELGKEVAIEAQRLGV-EVIAVDRYANAPAMQ--VA-----H-RSHVIDMLDGDALRAVIEREKPDYIV   80 (395)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCCCCchHH--hh-----h-heEECCCCCHHHHHHHHHHhCCCEEE
Confidence            4569999985 7899999999999999 888887765332111  10     1 245678889888988887  789988


Q ss_pred             Eec
Q 021819           86 HVA   88 (307)
Q Consensus        86 ~~a   88 (307)
                      -..
T Consensus        81 ~~~   83 (395)
T PRK09288         81 PEI   83 (395)
T ss_pred             Eee
Confidence            643

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.20  E-value=0.021  Score=49.56  Aligned_cols=67  Identities=12%  Similarity=0.232  Sum_probs=50.4

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      ..+++|.|.| .|.||+.+++.|..-|+ +|++.+|......           ++...    ...+++.++++++|+|+.
T Consensus       134 l~g~tvgIvG-~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----------~~~~~----~~~~~l~e~l~~aDvvv~  196 (312)
T PRK15469        134 REDFTIGILG-AGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----------GVQSF----AGREELSAFLSQTRVLIN  196 (312)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----------Cceee----cccccHHHHHhcCCEEEE
Confidence            4678999999 69999999999999899 9999887543211           11111    134578899999999998


Q ss_pred             eccC
Q 021819           87 VASP   90 (307)
Q Consensus        87 ~a~~   90 (307)
                      +...
T Consensus       197 ~lPl  200 (312)
T PRK15469        197 LLPN  200 (312)
T ss_pred             CCCC
Confidence            8654

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=96.20  E-value=0.0069  Score=52.72  Aligned_cols=75  Identities=19%  Similarity=0.225  Sum_probs=60.0

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChh-HHHHHhcCccEEEEe
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG-AVSRAVEGCKGVFHV   87 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~-~~~~~~~~~d~vi~~   87 (307)
                      +++||+.| +||+.+.++..|.+++..+|++..|...+.+.+..-    . +++.+..|+++++ .+.+.++..|.++.+
T Consensus         2 ~~~vlllg-sg~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~~----~-~~~av~ldv~~~~~~L~~~v~~~D~viSL   75 (445)
T KOG0172|consen    2 KKGVLLLG-SGFVSRPVADFLSRKKDVNVTVASRTLKDAEALVKG----I-NIKAVSLDVADEELALRKEVKPLDLVISL   75 (445)
T ss_pred             CcceEEec-CccccchHHHHHhhcCCceEEEehhhHHHHHHHhcC----C-CccceEEEccchHHHHHhhhcccceeeee
Confidence            57899999 699999999999998765888888866555544331    1 5788899999988 899999999998886


Q ss_pred             cc
Q 021819           88 AS   89 (307)
Q Consensus        88 a~   89 (307)
                      -.
T Consensus        76 lP   77 (445)
T KOG0172|consen   76 LP   77 (445)
T ss_pred             cc
Confidence            43

>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]

Probab=96.20  E-value=0.076  Score=43.82  Aligned_cols=96  Identities=16%  Similarity=0.157  Sum_probs=63.9

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~vi~   86 (307)
                      +++|+|.|||+ =++.|++.|...+. .++...-...........      . ....+-..+.+.+.+.++  ++|+||.
T Consensus         2 ~~~ilvlGGT~-Dar~la~~L~~~~~-~~~~ss~t~~g~~l~~~~------~-~~~~~G~l~~e~l~~~l~e~~i~llID   72 (257)
T COG2099           2 MMRILLLGGTS-DARALAKKLAAAPV-DIILSSLTGYGAKLAEQI------G-PVRVGGFLGAEGLAAFLREEGIDLLID   72 (257)
T ss_pred             CceEEEEeccH-HHHHHHHHhhccCc-cEEEEEcccccccchhcc------C-CeeecCcCCHHHHHHHHHHcCCCEEEE
Confidence            46899999975 69999999998874 333333322222222211      1 133345567788988886  7899999


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEE
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV  128 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  128 (307)
                      ....+.               ...+.|.+++|++.|+..+.|
T Consensus        73 ATHPyA---------------a~iS~Na~~aake~gipy~r~   99 (257)
T COG2099          73 ATHPYA---------------ARISQNAARAAKETGIPYLRL   99 (257)
T ss_pred             CCChHH---------------HHHHHHHHHHHHHhCCcEEEE
Confidence            865532               345889999999998876655

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=96.18  E-value=0.011  Score=51.24  Aligned_cols=75  Identities=17%  Similarity=0.135  Sum_probs=51.0

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhH---HHHHh--cCcc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA---VSRAV--EGCK   82 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~---~~~~~--~~~d   82 (307)
                      ++++++|+|++|.+|..+++.+...|. +|+++++++...+.+..+      ++..+ .|..+.+.   +.+..  +++|
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~------g~~~~-~~~~~~~~~~~~~~~~~~~~~d  215 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQA------GADAV-FNYRAEDLADRILAATAGQGVD  215 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc------CCCEE-EeCCCcCHHHHHHHHcCCCceE
Confidence            467999999999999999999999998 899988876554444332      22111 23333332   33333  2689


Q ss_pred             EEEEeccC
Q 021819           83 GVFHVASP   90 (307)
Q Consensus        83 ~vi~~a~~   90 (307)
                      .++++++.
T Consensus       216 ~vi~~~~~  223 (325)
T cd08253         216 VIIEVLAN  223 (325)
T ss_pred             EEEECCch
Confidence            99998764

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.16  E-value=0.016  Score=52.17  Aligned_cols=67  Identities=16%  Similarity=0.066  Sum_probs=48.4

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      ..+++++|+|. |.||+.+++.|...|. +|++.++++.+.......      ++..     .+   +.++++++|+||.
T Consensus       210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~------G~~v-----~~---l~eal~~aDVVI~  273 (425)
T PRK05476        210 IAGKVVVVAGY-GDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMD------GFRV-----MT---MEEAAELGDIFVT  273 (425)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhc------CCEe-----cC---HHHHHhCCCEEEE
Confidence            36889999995 8999999999999999 899988876553222111      2221     12   3456779999998


Q ss_pred             ecc
Q 021819           87 VAS   89 (307)
Q Consensus        87 ~a~   89 (307)
                      +.|
T Consensus       274 aTG  276 (425)
T PRK05476        274 ATG  276 (425)
T ss_pred             CCC
Confidence            764

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.13  E-value=0.027  Score=43.59  Aligned_cols=59  Identities=15%  Similarity=0.168  Sum_probs=42.8

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      ++++|+++|.|.+..+|+.|+..|.++|. .|+......                           ..+++.++++|+||
T Consensus        33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~a-tVt~~h~~T---------------------------~~l~~~~~~ADIVV   84 (160)
T PF02882_consen   33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGA-TVTICHSKT---------------------------KNLQEITRRADIVV   84 (160)
T ss_dssp             STTT-EEEEE-TTTTTHHHHHHHHHHTT--EEEEE-TTS---------------------------SSHHHHHTTSSEEE
T ss_pred             CCCCCEEEEECCcCCCChHHHHHHHhCCC-eEEeccCCC---------------------------CcccceeeeccEEe
Confidence            35789999999999999999999999999 776543210                           23567778999999


Q ss_pred             EeccCCC
Q 021819           86 HVASPCT   92 (307)
Q Consensus        86 ~~a~~~~   92 (307)
                      -.+|...
T Consensus        85 sa~G~~~   91 (160)
T PF02882_consen   85 SAVGKPN   91 (160)
T ss_dssp             E-SSSTT
T ss_pred             eeecccc
Confidence            9988744

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=96.09  E-value=0.04  Score=43.81  Aligned_cols=79  Identities=11%  Similarity=0.076  Sum_probs=51.7

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCC-hhHHHHHhcCccEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD-SGAVSRAVEGCKGV   84 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d-~~~~~~~~~~~d~v   84 (307)
                      ++++|+++|.|-|.-+|+.|+..|+++|+ .|+..+.+...... ...      ...--.....| +..+.+.++++|+|
T Consensus        59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~A-tVti~~~~~~~~~~-~~~------~~~hs~t~~~~~~~~l~~~~~~ADIV  130 (197)
T cd01079          59 RLYGKTITIINRSEVVGRPLAALLANDGA-RVYSVDINGIQVFT-RGE------SIRHEKHHVTDEEAMTLDCLSQSDVV  130 (197)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCC-EEEEEecCcccccc-ccc------ccccccccccchhhHHHHHhhhCCEE
Confidence            46789999999999999999999999999 88877543211100 000      00000011112 23477888999999


Q ss_pred             EEeccCCC
Q 021819           85 FHVASPCT   92 (307)
Q Consensus        85 i~~a~~~~   92 (307)
                      |-.+|...
T Consensus       131 IsAvG~~~  138 (197)
T cd01079         131 ITGVPSPN  138 (197)
T ss_pred             EEccCCCC
Confidence            99988644

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PRK07574 formate dehydrogenase; Provisional

Probab=96.09  E-value=0.017  Score=51.54  Aligned_cols=70  Identities=19%  Similarity=0.093  Sum_probs=50.5

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      ++.+|+|.|.| .|-||+.+++.|..-|. +|++.+|.....+.....      +       +.-..+++++++.+|+|+
T Consensus       189 ~L~gktVGIvG-~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~------g-------~~~~~~l~ell~~aDvV~  253 (385)
T PRK07574        189 DLEGMTVGIVG-AGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQEL------G-------LTYHVSFDSLVSVCDVVT  253 (385)
T ss_pred             ecCCCEEEEEC-CCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhc------C-------ceecCCHHHHhhcCCEEE
Confidence            45688999999 59999999999999999 999998865322111111      2       211235778899999998


Q ss_pred             EeccC
Q 021819           86 HVASP   90 (307)
Q Consensus        86 ~~a~~   90 (307)
                      .+...
T Consensus       254 l~lPl  258 (385)
T PRK07574        254 IHCPL  258 (385)
T ss_pred             EcCCC
Confidence            88654

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.08  E-value=0.027  Score=45.65  Aligned_cols=74  Identities=16%  Similarity=0.134  Sum_probs=48.3

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccE
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~   83 (307)
                      +-++++++|+|.|| |-+|...++.|++.|+ +|+.+.+..  .+.+..+....  .+.+.+-++.     ...++++|.
T Consensus         5 ~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga-~V~VIs~~~--~~~l~~l~~~~--~i~~~~~~~~-----~~~l~~adl   73 (202)
T PRK06718          5 MIDLSNKRVVIVGG-GKVAGRRAITLLKYGA-HIVVISPEL--TENLVKLVEEG--KIRWKQKEFE-----PSDIVDAFL   73 (202)
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHHCCC-eEEEEcCCC--CHHHHHHHhCC--CEEEEecCCC-----hhhcCCceE
Confidence            34678899999997 9999999999999998 888876532  22222221111  4555443332     223578888


Q ss_pred             EEEec
Q 021819           84 VFHVA   88 (307)
Q Consensus        84 vi~~a   88 (307)
                      ||-+.
T Consensus        74 ViaaT   78 (202)
T PRK06718         74 VIAAT   78 (202)
T ss_pred             EEEcC
Confidence            87763

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.06  E-value=0.018  Score=53.22  Aligned_cols=76  Identities=14%  Similarity=0.066  Sum_probs=54.7

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCCh-------------h--
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS-------------G--   72 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~-------------~--   72 (307)
                      ...+|+|+|+ |-+|...+..+...|. +|+++++++...+..+.+      +..++..|..+.             +  
T Consensus       164 pg~kVlViGa-G~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aesl------GA~~v~i~~~e~~~~~~gya~~~s~~~~  235 (509)
T PRK09424        164 PPAKVLVIGA-GVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESM------GAEFLELDFEEEGGSGDGYAKVMSEEFI  235 (509)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc------CCeEEEeccccccccccchhhhcchhHH
Confidence            4679999995 9999999999999999 899999988777666665      444443333211             1  


Q ss_pred             -H----HHHHhcCccEEEEeccCC
Q 021819           73 -A----VSRAVEGCKGVFHVASPC   91 (307)
Q Consensus        73 -~----~~~~~~~~d~vi~~a~~~   91 (307)
                       .    +.+.++++|+||.+++..
T Consensus       236 ~~~~~~~~~~~~gaDVVIetag~p  259 (509)
T PRK09424        236 KAEMALFAEQAKEVDIIITTALIP  259 (509)
T ss_pred             HHHHHHHHhccCCCCEEEECCCCC
Confidence             1    122235799999999874

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=96.05  E-value=0.029  Score=49.77  Aligned_cols=75  Identities=13%  Similarity=0.097  Sum_probs=50.6

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCCh---hHHHHHhc--Ccc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS---GAVSRAVE--GCK   82 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~---~~~~~~~~--~~d   82 (307)
                      .+.+|+|.|+ |.+|...++.+...|..+|+++++++.+.+.++.+      ++..+ .|..++   +.+.++..  ++|
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~------Ga~~~-i~~~~~~~~~~i~~~~~~~g~d  247 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREF------GATHT-VNSSGTDPVEAIRALTGGFGAD  247 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc------CCceE-EcCCCcCHHHHHHHHhCCCCCC
Confidence            4679999985 99999999998888984588888877666655544      22211 233332   23333333  589


Q ss_pred             EEEEeccC
Q 021819           83 GVFHVASP   90 (307)
Q Consensus        83 ~vi~~a~~   90 (307)
                      .||.++|.
T Consensus       248 ~vid~~g~  255 (358)
T TIGR03451       248 VVIDAVGR  255 (358)
T ss_pred             EEEECCCC
Confidence            99999774

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=96.05  E-value=0.03  Score=47.84  Aligned_cols=75  Identities=12%  Similarity=0.104  Sum_probs=47.9

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCC-hhHHHHHh--cCccEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD-SGAVSRAV--EGCKGV   84 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d-~~~~~~~~--~~~d~v   84 (307)
                      .+.+|+|.|+ |.+|...++.+...|..+|+++++++.+.+.++.+      ++..+ .|..+ .+.+.++.  .++|++
T Consensus       120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~~------Ga~~~-i~~~~~~~~~~~~~~~~g~d~v  191 (280)
T TIGR03366       120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELALSF------GATAL-AEPEVLAERQGGLQNGRGVDVA  191 (280)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc------CCcEe-cCchhhHHHHHHHhCCCCCCEE
Confidence            4678999986 89999999988888984488877766555444443      22211 12222 12233332  258999


Q ss_pred             EEeccC
Q 021819           85 FHVASP   90 (307)
Q Consensus        85 i~~a~~   90 (307)
                      |.+.|.
T Consensus       192 id~~G~  197 (280)
T TIGR03366       192 LEFSGA  197 (280)
T ss_pred             EECCCC
Confidence            998764

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PLN02928 oxidoreductase family protein

Probab=96.04  E-value=0.023  Score=50.11  Aligned_cols=80  Identities=16%  Similarity=0.054  Sum_probs=52.3

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCCCCCceEEEEcccCChhHHHHHhcCccEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~v   84 (307)
                      ++.+|++.|.| .|-||+.+++.|..-|. +|++.+|+........ .++..   .+..+.......+++.++++++|+|
T Consensus       156 ~l~gktvGIiG-~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~L~ell~~aDiV  230 (347)
T PLN02928        156 TLFGKTVFILG-YGAIGIELAKRLRPFGV-KLLATRRSWTSEPEDGLLIPNG---DVDDLVDEKGGHEDIYEFAGEADIV  230 (347)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHhhCCC-EEEEECCCCChhhhhhhccccc---cccccccccCcccCHHHHHhhCCEE
Confidence            35689999999 59999999999998899 9999988633211100 00000   0011100111445788999999999


Q ss_pred             EEeccC
Q 021819           85 FHVASP   90 (307)
Q Consensus        85 i~~a~~   90 (307)
                      +.+...
T Consensus       231 vl~lPl  236 (347)
T PLN02928        231 VLCCTL  236 (347)
T ss_pred             EECCCC
Confidence            998764

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=96.01  E-value=0.0091  Score=52.23  Aligned_cols=78  Identities=14%  Similarity=0.130  Sum_probs=47.7

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCC--CCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAG--DANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      ||+|.|.|+ |.+|+.++..|.+.|+ +|.+++|++...+.+.......  ..... ....+.-..+..+.++++|+||-
T Consensus         1 mmkI~iiG~-G~mG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~vi~   77 (325)
T PRK00094          1 MMKIAVLGA-GSWGTALAIVLARNGH-DVTLWARDPEQAAEINADRENPRYLPGIK-LPDNLRATTDLAEALADADLILV   77 (325)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHcCcccccCCCCc-CCCCeEEeCCHHHHHhCCCEEEE
Confidence            358999995 9999999999999999 8999999765444333211000  00000 00011111234456778999998


Q ss_pred             ecc
Q 021819           87 VAS   89 (307)
Q Consensus        87 ~a~   89 (307)
                      +..
T Consensus        78 ~v~   80 (325)
T PRK00094         78 AVP   80 (325)
T ss_pred             eCC
Confidence            854

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.01  E-value=0.0074  Score=49.84  Aligned_cols=74  Identities=22%  Similarity=0.302  Sum_probs=49.0

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCC--eEEEEeCCC----CCCccc----ccCCCCCCCceEEEEcccCChhHHHH
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYT--SINATVFPG----SDSSHL----FALPGAGDANLRVFEADVLDSGAVSR   76 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~--~V~~~~r~~----~~~~~~----~~~~~~~~~~~~~i~~D~~d~~~~~~   76 (307)
                      ++.++++|.|+ |..|+.+++.|.+.|..  +|+.++|+.    +..+.+    ..+....  +..    +. + .++.+
T Consensus        23 l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~--~~~----~~-~-~~l~~   93 (226)
T cd05311          23 IEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKET--NPE----KT-G-GTLKE   93 (226)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHh--ccC----cc-c-CCHHH
Confidence            45679999997 99999999999999997  799999973    322111    1110000  000    11 1 13556


Q ss_pred             HhcCccEEEEecc
Q 021819           77 AVEGCKGVFHVAS   89 (307)
Q Consensus        77 ~~~~~d~vi~~a~   89 (307)
                      .++++|+||++.+
T Consensus        94 ~l~~~dvlIgaT~  106 (226)
T cd05311          94 ALKGADVFIGVSR  106 (226)
T ss_pred             HHhcCCEEEeCCC
Confidence            6678999999986

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=95.98  E-value=0.037  Score=48.43  Aligned_cols=95  Identities=20%  Similarity=0.212  Sum_probs=55.2

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHC--CCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      .++|.|.||||++|..|++.|.++  ...++..+....+.-+.+. +...   .+. ++ |+   +.  ..++++|++|-
T Consensus         4 ~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~-~~~~---~~~-v~-~~---~~--~~~~~~Dvvf~   72 (336)
T PRK08040          4 GWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLR-FGGK---SVT-VQ-DA---AE--FDWSQAQLAFF   72 (336)
T ss_pred             CCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEE-ECCc---ceE-EE-eC---ch--hhccCCCEEEE
Confidence            459999999999999999999885  3346666544332222221 1100   111 11 22   11  12368899998


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcc
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS  133 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~  133 (307)
                      +++..                  .+..+...+.+.|+ ++|=.|+..
T Consensus        73 a~p~~------------------~s~~~~~~~~~~g~-~VIDlS~~f  100 (336)
T PRK08040         73 VAGRE------------------ASAAYAEEATNAGC-LVIDSSGLF  100 (336)
T ss_pred             CCCHH------------------HHHHHHHHHHHCCC-EEEECChHh
Confidence            86431                  13455666666664 577777643

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=95.97  E-value=0.14  Score=44.30  Aligned_cols=67  Identities=10%  Similarity=0.036  Sum_probs=45.9

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEecc
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a~   89 (307)
                      +|.|.| .|-+|+.+++.|++.|+ +|++.+|+++..+.+...      ++..    ..+.+++.+.++++|+||-+..
T Consensus         2 ~Ig~IG-lG~MG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~------g~~~----~~~~~e~~~~~~~~dvvi~~v~   68 (301)
T PRK09599          2 QLGMIG-LGRMGGNMARRLLRGGH-EVVGYDRNPEAVEALAEE------GATG----ADSLEELVAKLPAPRVVWLMVP   68 (301)
T ss_pred             EEEEEc-ccHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHC------CCee----cCCHHHHHhhcCCCCEEEEEec
Confidence            688888 79999999999999999 899999987665544332      2221    1234444333335688888754

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.96  E-value=0.018  Score=50.53  Aligned_cols=68  Identities=12%  Similarity=0.004  Sum_probs=49.9

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      ++.+|+|.|.|- |.||+.+++.|..-|. +|++.+|...... ....      ++        ...++.++++++|+|+
T Consensus       147 ~L~gktvgIiG~-G~IG~~vA~~l~~~G~-~V~~~d~~~~~~~-~~~~------~~--------~~~~l~ell~~aDiV~  209 (333)
T PRK13243        147 DVYGKTIGIIGF-GRIGQAVARRAKGFGM-RILYYSRTRKPEA-EKEL------GA--------EYRPLEELLRESDFVS  209 (333)
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHHCCC-EEEEECCCCChhh-HHHc------CC--------EecCHHHHHhhCCEEE
Confidence            467899999995 9999999999999999 8999988643321 1010      11        1234677889999999


Q ss_pred             EeccC
Q 021819           86 HVASP   90 (307)
Q Consensus        86 ~~a~~   90 (307)
                      .+...
T Consensus       210 l~lP~  214 (333)
T PRK13243        210 LHVPL  214 (333)
T ss_pred             EeCCC
Confidence            88654

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.94  E-value=0.04  Score=41.70  Aligned_cols=58  Identities=16%  Similarity=0.143  Sum_probs=46.2

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      +.++|+|.|.|.+.-+|+.|+..|.++|. .|....++.                           .++++.++++|+||
T Consensus        25 ~~~gk~v~VvGrs~~vG~pla~lL~~~ga-tV~~~~~~t---------------------------~~l~~~v~~ADIVv   76 (140)
T cd05212          25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGA-TVYSCDWKT---------------------------IQLQSKVHDADVVV   76 (140)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeCCCC---------------------------cCHHHHHhhCCEEE
Confidence            35789999999999999999999999998 777654321                           13556788899999


Q ss_pred             EeccCC
Q 021819           86 HVASPC   91 (307)
Q Consensus        86 ~~a~~~   91 (307)
                      -..|..
T Consensus        77 sAtg~~   82 (140)
T cd05212          77 VGSPKP   82 (140)
T ss_pred             EecCCC
Confidence            887764

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=95.91  E-value=0.018  Score=50.92  Aligned_cols=75  Identities=16%  Similarity=0.153  Sum_probs=49.4

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCCCCCceEEEEcccCCh----hHHHHHh-cCc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDS----GAVSRAV-EGC   81 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~----~~~~~~~-~~~   81 (307)
                      .+.+|+|+|++|.+|..+++.+...|. +|+++++++.+.+.++ .+      ++..+ .|..+.    +.+.+.. .++
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~~~k~~~~~~~l------Ga~~v-i~~~~~~~~~~~i~~~~~~gv  229 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKL------GFDEA-FNYKEEPDLDAALKRYFPEGI  229 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhc------CCCEE-EECCCcccHHHHHHHHCCCCc
Confidence            467999999999999999998888899 8888887765555443 23      22221 122221    1222222 258


Q ss_pred             cEEEEeccC
Q 021819           82 KGVFHVASP   90 (307)
Q Consensus        82 d~vi~~a~~   90 (307)
                      |.++.+.|.
T Consensus       230 D~v~d~vG~  238 (348)
T PLN03154        230 DIYFDNVGG  238 (348)
T ss_pred             EEEEECCCH
Confidence            999998763

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=95.91  E-value=0.0099  Score=50.85  Aligned_cols=65  Identities=17%  Similarity=0.197  Sum_probs=44.7

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEecc
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a~   89 (307)
                      +|.|.| .|.+|..++..|.+.|+ +|++.+|++...+.+...      +.    .+.... .. +.++++|+||-+..
T Consensus         2 ~I~IIG-~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~------g~----~~~~~~-~~-~~~~~aDlVilavp   66 (279)
T PRK07417          2 KIGIVG-LGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIER------GL----VDEAST-DL-SLLKDCDLVILALP   66 (279)
T ss_pred             eEEEEe-ecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHC------CC----cccccC-CH-hHhcCCCEEEEcCC
Confidence            788998 79999999999999999 899999876554443322      11    011111 11 24678999999854

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=95.88  E-value=0.015  Score=50.45  Aligned_cols=70  Identities=20%  Similarity=0.208  Sum_probs=47.3

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      .++|.|.| +|.+|..+++.|.+.|+ .+|++.+|++...+.+...      ++..   ...  ....+.++++|+||.+
T Consensus         6 ~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~------g~~~---~~~--~~~~~~~~~aDvViia   73 (307)
T PRK07502          6 FDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARAREL------GLGD---RVT--TSAAEAVKGADLVILC   73 (307)
T ss_pred             CcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhC------CCCc---eec--CCHHHHhcCCCEEEEC
Confidence            46899998 79999999999999885 3799998876544333222      1110   011  1234456789999998


Q ss_pred             ccC
Q 021819           88 ASP   90 (307)
Q Consensus        88 a~~   90 (307)
                      ...
T Consensus        74 vp~   76 (307)
T PRK07502         74 VPV   76 (307)
T ss_pred             CCH
Confidence            754

>KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones]

Probab=95.87  E-value=0.086  Score=47.32  Aligned_cols=110  Identities=19%  Similarity=0.019  Sum_probs=66.7

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHH------HHHhcCcc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAV------SRAVEGCK   82 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~------~~~~~~~d   82 (307)
                      .-+|||.|| |+||-.|.+.|+-.|+.+|..++..--...++.+       ++-+-+-|+..+.+.      .++-.+++
T Consensus        12 ~~riLvVGa-GGIGCELLKnLal~gf~~IhiIDlDTIDlSNLNR-------QFLFrkkhVgqsKA~vA~~~v~~Fnpn~~   83 (603)
T KOG2013|consen   12 SGRILVVGA-GGIGCELLKNLALTGFEEIHIIDLDTIDLSNLNR-------QFLFRKKHVGQSKATVAAKAVKQFNPNIK   83 (603)
T ss_pred             cCeEEEEec-CcccHHHHHHHHHhcCCeeEEEeccceeccchhh-------hheeehhhcCchHHHHHHHHHHHhCCCCc
Confidence            568999995 9999999999999999888888775545444433       344555566555332      22223678


Q ss_pred             EEEEeccCCCCCCCCChhhhhhhh------hHHHHHHHHHHHHhcCCcEEEE
Q 021819           83 GVFHVASPCTLEDPVDPEKELILP------AVQGTLNVLEAAKRFGVRRVVV  128 (307)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~------n~~~~~~l~~~~~~~~~~~~v~  128 (307)
                      ++..+|.+.... ....+...|++      |..+-+.+-+.|....+. +|-
T Consensus        84 l~~yhanI~e~~-fnv~ff~qfdiV~NaLDNlaAR~yVNr~C~~a~vP-LIe  133 (603)
T KOG2013|consen   84 LVPYHANIKEPK-FNVEFFRQFDIVLNALDNLAARRYVNRMCLAASVP-LIE  133 (603)
T ss_pred             eEeccccccCcc-hHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhcCC-cee
Confidence            888887776541 11222333332      344444555555554432 444

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=95.86  E-value=0.028  Score=50.53  Aligned_cols=68  Identities=13%  Similarity=0.062  Sum_probs=49.8

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      ..+++|+|.|+ |-||+.+++.+...|. +|+++++++.........      ++..+     +   ..+++.++|+||.
T Consensus       200 l~GktVvViG~-G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~------G~~~~-----~---~~e~v~~aDVVI~  263 (413)
T cd00401         200 IAGKVAVVAGY-GDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAME------GYEVM-----T---MEEAVKEGDIFVT  263 (413)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhc------CCEEc-----c---HHHHHcCCCEEEE
Confidence            35789999995 8999999999999999 898888876655444332      33222     1   1345678999999


Q ss_pred             eccC
Q 021819           87 VASP   90 (307)
Q Consensus        87 ~a~~   90 (307)
                      ++|.
T Consensus       264 atG~  267 (413)
T cd00401         264 TTGN  267 (413)
T ss_pred             CCCC
Confidence            8654

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=95.85  E-value=0.012  Score=49.61  Aligned_cols=77  Identities=19%  Similarity=0.156  Sum_probs=55.7

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCCh---hHHHHHh-cCcc
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS---GAVSRAV-EGCK   82 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~---~~~~~~~-~~~d   82 (307)
                      +.+.+++|+||+|-+|+...+--.-+|+ +|+++.-++++.+.+.+...... .     .|-..+   +.+.+++ +++|
T Consensus       149 k~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~-~-----idyk~~d~~~~L~~a~P~GID  221 (340)
T COG2130         149 KAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDA-G-----IDYKAEDFAQALKEACPKGID  221 (340)
T ss_pred             CCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCce-e-----eecCcccHHHHHHHHCCCCeE
Confidence            5678999999999999988887777899 99999998888887776332211 1     233222   2333333 4789


Q ss_pred             EEEEeccC
Q 021819           83 GVFHVASP   90 (307)
Q Consensus        83 ~vi~~a~~   90 (307)
                      +.|.|.|.
T Consensus       222 vyfeNVGg  229 (340)
T COG2130         222 VYFENVGG  229 (340)
T ss_pred             EEEEcCCc
Confidence            99999886

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=95.85  E-value=0.066  Score=47.91  Aligned_cols=74  Identities=18%  Similarity=0.124  Sum_probs=49.4

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC-CcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      .+.+++|.|+ |.+|...++.+...|. +|++++++.++ .+.++.+      ++..+ .|..+.+.+.+...++|+||.
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~l------Ga~~~-i~~~~~~~v~~~~~~~D~vid  248 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRL------GADSF-LVTTDSQKMKEAVGTMDFIID  248 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhC------CCcEE-EcCcCHHHHHHhhCCCcEEEE
Confidence            4678999885 9999999999999999 78888776443 2333333      33222 233333455555557899999


Q ss_pred             eccC
Q 021819           87 VASP   90 (307)
Q Consensus        87 ~a~~   90 (307)
                      ++|.
T Consensus       249 ~~G~  252 (375)
T PLN02178        249 TVSA  252 (375)
T ss_pred             CCCc
Confidence            9764

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=95.85  E-value=0.042  Score=49.07  Aligned_cols=75  Identities=16%  Similarity=0.153  Sum_probs=49.5

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChh---HHHHHhc-CccE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AVSRAVE-GCKG   83 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~---~~~~~~~-~~d~   83 (307)
                      .+.+|+|+|+ |.+|...++.+...|..+|+++++++.+.+.++.+      ++..+ .|..+++   .+.++.. ++|+
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~------Ga~~~-i~~~~~~~~~~i~~~~~~g~d~  262 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALAREL------GATAT-VNAGDPNAVEQVRELTGGGVDY  262 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHc------CCceE-eCCCchhHHHHHHHHhCCCCCE
Confidence            3579999985 99999999988888985588888877666555443      22211 2333322   2333322 5899


Q ss_pred             EEEeccC
Q 021819           84 VFHVASP   90 (307)
Q Consensus        84 vi~~a~~   90 (307)
                      ||.++|.
T Consensus       263 vid~~G~  269 (371)
T cd08281         263 AFEMAGS  269 (371)
T ss_pred             EEECCCC
Confidence            9999764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=95.84  E-value=0.015  Score=50.24  Aligned_cols=65  Identities=14%  Similarity=0.184  Sum_probs=45.4

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEecc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a~   89 (307)
                      ++|.|.| .|.+|..+++.|++.|+ +|++.+|+++..+.+...      ++.     .  ..+..++++++|+||-+..
T Consensus         2 ~~Ig~IG-lG~mG~~mA~~l~~~G~-~V~v~d~~~~~~~~~~~~------g~~-----~--~~s~~~~~~~aDvVi~~vp   66 (296)
T PRK15461          2 AAIAFIG-LGQMGSPMASNLLKQGH-QLQVFDVNPQAVDALVDK------GAT-----P--AASPAQAAAGAEFVITMLP   66 (296)
T ss_pred             CeEEEEe-eCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHc------CCc-----c--cCCHHHHHhcCCEEEEecC
Confidence            4788998 79999999999999999 999999977665444322      111     1  1123345667788777743

>cd08293 PTGR2 Prostaglandin reductase

Probab=95.84  E-value=0.02  Score=50.46  Aligned_cols=74  Identities=15%  Similarity=0.108  Sum_probs=48.6

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCCh---hHHHHHh-cCccEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDS---GAVSRAV-EGCKGV   84 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~---~~~~~~~-~~~d~v   84 (307)
                      .+|+|+||+|.+|..+++.+...|..+|+++++++++.+.+.. +      ++..+ .|..+.   +.+.++. .++|+|
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l------Ga~~v-i~~~~~~~~~~i~~~~~~gvd~v  228 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL------GFDAA-INYKTDNVAERLRELCPEGVDVY  228 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc------CCcEE-EECCCCCHHHHHHHHCCCCceEE
Confidence            6999999999999999998888897468888877655544433 3      22221 122222   2233322 368999


Q ss_pred             EEeccC
Q 021819           85 FHVASP   90 (307)
Q Consensus        85 i~~a~~   90 (307)
                      +++.|.
T Consensus       229 id~~g~  234 (345)
T cd08293         229 FDNVGG  234 (345)
T ss_pred             EECCCc
Confidence            998764

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]

Probab=95.82  E-value=0.092  Score=42.97  Aligned_cols=108  Identities=13%  Similarity=0.143  Sum_probs=69.5

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCC------------CCCCCceEEEE---cccCCh--hH
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP------------GAGDANLRVFE---ADVLDS--GA   73 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~------------~~~~~~~~~i~---~D~~d~--~~   73 (307)
                      ++.+.| -|-+|..+++.|++.|+ +|++.++++...+.++...            ....+++.|+-   +|+++.  ++
T Consensus         2 ~iGmiG-LGrMG~n~v~rl~~~gh-dvV~yD~n~~av~~~~~~ga~~a~sl~el~~~L~~pr~vWlMvPag~it~~vi~~   79 (300)
T COG1023           2 QIGMIG-LGRMGANLVRRLLDGGH-DVVGYDVNQTAVEELKDEGATGAASLDELVAKLSAPRIVWLMVPAGDITDAVIDD   79 (300)
T ss_pred             cceeec-cchhhHHHHHHHHhCCC-eEEEEcCCHHHHHHHHhcCCccccCHHHHHHhcCCCcEEEEEccCCCchHHHHHH
Confidence            566677 69999999999999999 9999999754433332211            00122555543   567664  45


Q ss_pred             HHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceecc
Q 021819           74 VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVP  137 (307)
Q Consensus        74 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~  137 (307)
                      +...++.=|+||.-.-                .|+.=+.+-.+.+.+.++ +|+=+.|++++.+
T Consensus        80 la~~L~~GDivIDGGN----------------S~y~Ds~rr~~~l~~kgi-~flD~GTSGG~~G  126 (300)
T COG1023          80 LAPLLSAGDIVIDGGN----------------SNYKDSLRRAKLLAEKGI-HFLDVGTSGGVWG  126 (300)
T ss_pred             HHhhcCCCCEEEECCc----------------cchHHHHHHHHHHHhcCC-eEEeccCCCCchh
Confidence            5556666688887421                122334566667777886 6888888776654

>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively

Probab=95.82  E-value=0.064  Score=45.84  Aligned_cols=32  Identities=22%  Similarity=0.223  Sum_probs=27.9

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCC
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFP   43 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~   43 (307)
                      +|+|.|+ |++|..+++.|...|..+++.++..
T Consensus         1 kVLIvGa-GGLGs~vA~~La~aGVg~ItlvD~D   32 (307)
T cd01486           1 KCLLLGA-GTLGCNVARNLLGWGVRHITFVDSG   32 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEECCC
Confidence            5888985 8999999999999999888888763

This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=95.81  E-value=0.11  Score=45.69  Aligned_cols=94  Identities=18%  Similarity=0.231  Sum_probs=54.0

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHH-CCCCe---EEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLD-NNYTS---INATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~-~g~~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~v   84 (307)
                      .++|.|.||||++|+.+++.|.+ ... .   +..+....+.-+.+ .+..  . .+.+.  ++ |+++    ++++|++
T Consensus         5 ~~~VaIvGATG~vG~ell~lL~~h~~f-~v~~l~~~aS~~saGk~~-~~~~--~-~l~v~--~~-~~~~----~~~~Div   72 (347)
T PRK06728          5 GYHVAVVGATGAVGQKIIELLEKETKF-NIAEVTLLSSKRSAGKTV-QFKG--R-EIIIQ--EA-KINS----FEGVDIA   72 (347)
T ss_pred             CCEEEEEeCCCHHHHHHHHHHHHCCCC-CcccEEEEECcccCCCCe-eeCC--c-ceEEE--eC-CHHH----hcCCCEE
Confidence            45899999999999999999985 444 4   44444332221111 1110  0 22222  22 3332    3689999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcc
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS  133 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~  133 (307)
                      |-+++..                  .+..+...+.+.| ..+|=.||..
T Consensus        73 f~a~~~~------------------~s~~~~~~~~~~G-~~VID~Ss~f  102 (347)
T PRK06728         73 FFSAGGE------------------VSRQFVNQAVSSG-AIVIDNTSEY  102 (347)
T ss_pred             EECCChH------------------HHHHHHHHHHHCC-CEEEECchhh
Confidence            9886531                  1344555566666 3577777644

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=95.80  E-value=0.082  Score=45.71  Aligned_cols=25  Identities=32%  Similarity=0.493  Sum_probs=22.7

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNN   33 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g   33 (307)
                      +++|.|.||||-+|+.+++.|.++.
T Consensus         1 ~~~VavvGATG~VG~~~~~~L~e~~   25 (334)
T COG0136           1 KLNVAVLGATGAVGQVLLELLEERH   25 (334)
T ss_pred             CcEEEEEeccchHHHHHHHHHHhcC
Confidence            3589999999999999999999864

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=95.78  E-value=0.033  Score=48.38  Aligned_cols=35  Identities=17%  Similarity=0.170  Sum_probs=30.6

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~   45 (307)
                      .|+|.|.| +|.+|+++++.|.+.|+ +|...+|+..
T Consensus         4 ~m~I~iiG-~G~~G~~lA~~l~~~G~-~V~~~~r~~~   38 (308)
T PRK14619          4 PKTIAILG-AGAWGSTLAGLASANGH-RVRVWSRRSG   38 (308)
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHHCCC-EEEEEeCCCC
Confidence            45899998 69999999999999999 9999988653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	307
2c29_D	337	Structure Of Dihydroflavonol Reductase From Vitis V		2e-45
2rh8_A	338	Structure Of Apo Anthocyanidin Reductase From Vitis		5e-42
2p4h_X	322	Crystal Structure Of Vestitone Reductase From Alfal		3e-38
1y1p_A	342	X-Ray Structure Of Aldehyde Reductase With Nadph Le		2e-18
1ujm_A	342	Crystal Structure Of Aldehyde Reductase 2 From Spor		3e-18
1r66_A	337	Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydr		5e-09
1r6d_A	337	Crystal Structure Of Desiv Double Mutant (Dtdp-Gluc		5e-09
3a1n_A	317	Crystal Structure Of L-Threonine Dehydrogenase From		8e-08
4ef7_B	337	Udp-Xylose Synthase Length = 337		9e-08
3a9w_A	317	Crystal Structure Of L-Threonine Bound L-Threonine		3e-07
2pk3_A	321	Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose		1e-06
1i3k_A	348	Molecular Basis For Severe Epimerase-Deficiency Gal		3e-06
1ek5_A	348	Structure Of Human Udp-Galactose 4-Epimerase In Com		3e-06
1hzj_A	348	Human Udp-Galactose 4-Epimerase: Accommodation Of U		4e-06
3ay3_A	267	Crystal Structure Of Glucuronic Acid Dehydrogeanse		6e-06
2b69_A	343	Crystal Structure Of Human Udp-Glucoronic Acid Deca		1e-05
1z74_A	358	Crystal Structure Of E.Coli Arna Dehydrogenase (Dec		3e-05
1u9j_A	358	Crystal Structure Of E. Coli Arna (Pmri) Decarboxyl		3e-05
1z7b_A	358	Crystal Structure Of E.Coli Arna Dehydrogenase (Dec		3e-05
1z75_A	358	Crystal Structure Of Arna Dehydrogenase (decarboxyl		3e-05
2bll_A	345	Apo-Structure Of The C-Terminal Decarboxylase Domai		3e-05
1z7e_A	660	Crystal Structure Of Full Length Arna Length = 660		4e-05
1z73_A	358	Crystal Structure Of E. Coli Arna Dehydrogenase (de		7e-05
3rft_A	267	Crystal Structure Of Uronate Dehydrogenase From Agr		8e-05
1g1a_A	361	The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra		1e-04
3ehe_A	313	Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-		2e-04
2pzk_A	330	Crystal Structure Of The Bordetella Bronchiseptica		3e-04
3aw9_A	308	Structure Of Udp-Galactose 4-Epimerase Mutant Lengt		4e-04
3icp_A	312	Crystal Structure Of Udp-Galactose 4-Epimerase Leng		5e-04
1z45_A	699	Crystal Structure Of The Gal10 Fusion Protein Galac		5e-04
1kep_A	348	The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra		9e-04

>pdb|2C29|D Chain D, Structure Of Dihydroflavonol Reductase From Vitis Vinifera At 1.8 A. Length = 337

Iteration: 1
 Score =  179 bits (454), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 105/277 (37%), Positives = 167/277 (60%), Gaps = 12/277 (4%)
Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS---HLFALPGAGDANLRVF 64
           + ETVCVTGA+GFIG+WLV  LL+  YT + ATV   ++     HL  LP A + +L ++
Sbjct: 4   QSETVCVTGASGFIGSWLVMRLLERGYT-VRATVRDPTNVKKVKHLLDLPKA-ETHLTLW 61
Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA-AKRFGV 123
           +AD+ D G+   A++GC GVFHVA+P   E   DPE E+I P ++G L ++++ A    V
Sbjct: 62  KADLADEGSFDEAIKGCTGVFHVATPMDFESK-DPENEVIKPTIEGMLGIMKSCAAAKTV 120
Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK--KW-YPVSKTLAEKAAWEFAE 180
           RR+V TSS +  V     +  V+DE+ W+D+E+C+++K   W Y VSKTLAE+AAW++A+
Sbjct: 121 RRLVFTSS-AGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAK 179
Query: 181 KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA-VPVKDVAKAQV 239
           ++ +D + I P   +GP +   +  S       + G++        G  V + D+  A +
Sbjct: 180 ENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHI 239
Query: 240 LLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
            LFE+P A GRY+C++      D A+ + + +PE+ +
Sbjct: 240 YLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNI 276

>pdb|2RH8|A Chain A, Structure Of Apo Anthocyanidin Reductase From Vitis Vinifera Length = 338

Iteration: 1
 Score =  167 bits (424), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 107/292 (36%), Positives = 164/292 (56%), Gaps = 20/292 (6%)
Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---SHLFALPGAG 57
           MA++    ++T CV G  GF+ + LVK LL   Y ++N TV    +    SHL  L   G
Sbjct: 1   MATQHPIGKKTACVVGGTGFVASLLVKLLLQKGY-AVNTTVRDPDNQKKVSHLLELQELG 59
Query: 58  DANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA 117
           D  L++F AD+ D  +    + GC  VFHVA+P       DPE ++I PA+QG +NV++A
Sbjct: 60  D--LKIFRADLTDELSFEAPIAGCDFVFHVATPVHFASE-DPENDMIKPAIQGVVNVMKA 116
Query: 118 AKRF-GVRRVVVTSSISAIVPNP-GWKGKVFDETSWTDLEYCKSRK--KW-YPVSKTLAE 172
             R   V+RV++TSS +A+  N     G V DE +WTD+E+  S K   W YP SKTLAE
Sbjct: 117 CTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAE 176
Query: 173 KAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK----DTQEYHWL-G 227
           KAAW+FAE++ +D++ + P    G  +   + +S  +   L+ G++      +    L G
Sbjct: 177 KAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSG 236
Query: 228 AVP---VKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
           +V    V+DV +A + + E  +ASGRY+C        + A+ +SK +P++ V
Sbjct: 237 SVSIAHVEDVCRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYKV 288

>pdb|2P4H|X Chain X, Crystal Structure Of Vestitone Reductase From Alfalfa (Medicago Sativa L.) Length = 322

Iteration: 1
 Score =  155 bits (392), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/272 (37%), Positives = 148/272 (54%), Gaps = 10/272 (3%)
Query: 12  VCVTGANGFIGTWLVKTLLDNNY---TSINATVFPGSDSSHLFALPGAGDANLRVFEADV 68
           VCVTG  GF+G+W++K+LL+N Y   T+I A      D S L  LPGA +  L  F AD+
Sbjct: 4   VCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASE-KLHFFNADL 62
Query: 69  LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA-AKRFGVRRVV 127
            +  + + A+EGC G+FH ASP       +PE+ +    V G L +L+A      V+R +
Sbjct: 63  SNPDSFAAAIEGCVGIFHTASPIDFA-VSEPEEIVTKRTVDGALGILKACVNSKTVKRFI 121
Query: 128 VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW---YPVSKTLAEKAAWEFAEKHGV 184
            TSS SA+  N G    V DE+ W+D++  +S K +   Y VSKTLAEKA  EF E++G+
Sbjct: 122 YTSSGSAVSFN-GKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGI 180
Query: 185 DVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFES 244
           DVV +     +G  + P L  S      L+ G K+         V V DVA+A + L E+
Sbjct: 181 DVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYLLEN 240
Query: 245 PAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
               GRY C+  I    + ++ +S  +PE+ +
Sbjct: 241 SVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQI 272

>pdb|1Y1P|A Chain A, X-Ray Structure Of Aldehyde Reductase With Nadph Length = 342

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 24/212 (11%)
Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA---GDANLRVF 64
           E   V VTGANGF+ + +V+ LL++ Y  +  T    S  ++L     A   G     V 
Sbjct: 10  EGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQKRWDAKYPGRFETAVV 68
Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GV 123
           E D+L  GA    ++G  GV H+AS  +  +  D   E++ PA+ GTLN L AA     V
Sbjct: 69  E-DMLKQGAYDEVIKGAAGVAHIASVVSFSNKYD---EVVTPAIGGTLNALRAAAATPSV 124
Query: 124 RRVVVTSS-ISAIVPNPGWKGKVFDETSWTDLEYCKSRKK----------W-YPVSKTLA 171
           +R V+TSS +SA++P P  +G   DE SW +LE     K           W Y  SKT A
Sbjct: 125 KRFVLTSSTVSALIPKPNVEGIYLDEKSW-NLESIDKAKTLPESDPQKSLWVYAASKTEA 183
Query: 172 EKAAWEFAEKHG--VDVVAIHPATCLGPLMQP 201
           E AAW+F +++     + A+ P   +G +  P
Sbjct: 184 ELAAWKFMDENKPHFTLNAVLPNYTIGTIFDP 215

>pdb|1UJM|A Chain A, Crystal Structure Of Aldehyde Reductase 2 From Sporobolomyces Salmonicolor Aku4429 Length = 342

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 105/212 (49%), Gaps = 24/212 (11%)
Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA---GDANLRVF 64
           E   V VTGANGF+ + +V+ LL++ Y  +  T    S  ++L     A   G     V 
Sbjct: 10  EGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQKRWDAKYPGRFETAVV 68
Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GV 123
           E D L  GA    ++G  GV H+AS  +  +  D   E++ PA+ GTLN L AA     V
Sbjct: 69  E-DXLKQGAYDEVIKGAAGVAHIASVVSFSNKYD---EVVTPAIGGTLNALRAAAATPSV 124
Query: 124 RRVVVTSS-ISAIVPNPGWKGKVFDETSWTDLEYCKSRKK----------W-YPVSKTLA 171
           +R V+TSS +SA++P P  +G   DE SW +LE     K           W Y  SKT A
Sbjct: 125 KRFVLTSSTVSALIPKPNVEGIYLDEKSW-NLESIDKAKTLPESDPQKSLWVYAASKTEA 183
Query: 172 EKAAWEFAE--KHGVDVVAIHPATCLGPLMQP 201
           E AAW+F +  K    + A+ P   +G +  P
Sbjct: 184 ELAAWKFXDENKPHFTLNAVLPNYTIGTIFDP 215

>pdb|1R66|A Chain A, Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydratase) From Streptomyces Venezuelae With Nad And Tyd Bound Length = 337

Iteration: 1
 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 76/195 (38%), Gaps = 14/195 (7%)
Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-----SHLFALPGAGDANLRVFEA 66
           + VTG  GFIG+  V+ LL   Y  + A      DS     +     P   D  LR    
Sbjct: 3   LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHG 62
Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
           D+ D+G ++R + G   + H A+   ++  +          VQGT  +L+ A   GV RV
Sbjct: 63  DIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRV 122
Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
           V  S+               D  SWT+    +     Y  SK  ++  A  +   +G+DV
Sbjct: 123 VHVSTDEVY--------GSIDSGSWTESSPLEPNSP-YAASKAGSDLVARAYHRTYGLDV 173
Query: 187 VAIHPATCLGPLMQP 201
                    GP   P
Sbjct: 174 RITRCCNNYGPYQHP 188

>pdb|1R6D|A Chain A, Crystal Structure Of Desiv Double Mutant (Dtdp-Glucose 4,6- Dehydratase) From Streptomyces Venezuelae With Nad And Dau Bound Length = 337

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 76/195 (38%), Gaps = 14/195 (7%)
Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-----SHLFALPGAGDANLRVFEA 66
           + VTG  GFIG+  V+ LL   Y  + A      DS     +     P   D  LR    
Sbjct: 3   LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHG 62
Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
           D+ D+G ++R + G   + H A+   ++  +          VQGT  +L+ A   GV RV
Sbjct: 63  DIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRV 122
Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
           V  S+               D  SWT+    +     Y  SK  ++  A  +   +G+DV
Sbjct: 123 VHVSTNQVY--------GSIDSGSWTESSPLEPNSP-YAASKAGSDLVARAYHRTYGLDV 173
Query: 187 VAIHPATCLGPLMQP 201
                    GP   P
Sbjct: 174 RITRCCNNYGPYQHP 188

>pdb|3A1N|A Chain A, Crystal Structure Of L-Threonine Dehydrogenase From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317

Iteration: 1
 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 116/280 (41%), Gaps = 35/280 (12%)
Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTG++G IGT LV  L +  Y   N        +S +      G   ++    DV + 
Sbjct: 2   ILVTGSSGQIGTELVPYLAEK-YGKKNVI------ASDIVQRDTGG---IKFITLDVSNR 51
Query: 72  GAVSRAVE--GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
             + RAVE      +FH+A   + +   DP     +  + GT N+LEAAK+  V +VV+ 
Sbjct: 52  DEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKV-NMNGTYNILEAAKQHRVEKVVIP 110
Query: 130 SSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAI 189
           S+I    P    K KV   T           +  Y V+K  AE     + EK G+DV ++
Sbjct: 111 STIGVFGPETP-KNKVPSIT-------ITRPRTMYGVTKIAAELLGQYYYEKFGLDVRSL 162
Query: 190 HPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG---AVPVK---DVAKAQVLLFE 243
                +    +P    +   ++      K  +   +L    A+P+    D  KA V L+E
Sbjct: 163 RYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYE 222
Query: 244 SPAASGRYLCTNGI----YQF--GDFAERVSKLFPEFPVH 277
             A   + +  NG     Y F   +   ++ +  PEF + 
Sbjct: 223 --ADRDKLVLRNGYNVTAYTFTPSELYSKIKERIPEFEIE 260

>pdb|3A9W|A Chain A, Crystal Structure Of L-Threonine Bound L-Threonine Dehydrogenase (Y137f) From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 116/280 (41%), Gaps = 35/280 (12%)
Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTG++G IGT LV  L +  Y   N        +S +      G   ++    DV + 
Sbjct: 2   ILVTGSSGQIGTELVPYLAEK-YGKKNVI------ASDIVQRDTGG---IKFITLDVSNR 51
Query: 72  GAVSRAVE--GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
             + RAVE      +FH+A   + +   DP     +  + GT N+LEAAK+  V +VV+ 
Sbjct: 52  DEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKV-NMNGTYNILEAAKQHRVEKVVIP 110
Query: 130 SSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAI 189
           S+I    P    K KV   T           +  + V+K  AE     + EK G+DV ++
Sbjct: 111 STIGVFGPETP-KNKVPSIT-------ITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSL 162
Query: 190 HPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG---AVPVK---DVAKAQVLLFE 243
                +    +P    +   ++      K  +   +L    A+P+    D  KA V L+E
Sbjct: 163 RYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYE 222
Query: 244 SPAASGRYLCTNGI----YQF--GDFAERVSKLFPEFPVH 277
             A   + +  NG     Y F   +   ++ +  PEF + 
Sbjct: 223 --ADRDKLVLRNGYNVTAYTFTPSELYSKIKERIPEFEIE 260

>pdb|2PK3|A Chain A, Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose Reductase Length = 321

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 83/187 (44%), Gaps = 19/187 (10%)
Query: 13  CVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG 72
            +TG  GF+G +L      N+ T  N  VF G+  ++   LP     N+ +   D++DS 
Sbjct: 16  LITGVAGFVGKYLA-----NHLTEQNVEVF-GTSRNNEAKLP-----NVEMISLDIMDSQ 64
Query: 73  AVSRAVEGCKG--VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
            V + +   K   +FH+A+  +++D    +K      V GTL+VL+A +   +   ++T 
Sbjct: 65  RVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILT- 123
Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
                + +    G +  E S    E        Y VSK      A ++ + +G+D++   
Sbjct: 124 -----IGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKAYGMDIIHTR 178
Query: 191 PATCLGP 197
               +GP
Sbjct: 179 TFNHIGP 185

>pdb|1I3K|A Chain A, Molecular Basis For Severe Epimerase-Deficiency Galactosemia: X-Ray Structure Of The Human V94m- Substituted Udp-Galactose 4-Epimerase Length = 348

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 71/178 (39%), Gaps = 26/178 (14%)
Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSI------NATVFPGSDSSHLFALPGAGDANLRV 63
           E V VTG  G+IG+  V  LL+  Y  +      NA    GS    L  +      ++  
Sbjct: 3   EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEF 62
Query: 64  FEADVLDSGAVSRAVE--GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF 121
            E D+LD GA+ R  +      V H A    + + V    +     + GT+ +LE  K  
Sbjct: 63  EEMDILDQGALQRLFKKYSFMAVIHFAGLKAMGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 122 GVRRVVVTSSISAI----------------VPNPGWKGKVFDETSWTDLEYCKSRKKW 163
           GV+ +V +SS +                    NP  K K F E    DL  C++ K W
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDL--CQADKTW 178

>pdb|1EK5|A Chain A, Structure Of Human Udp-Galactose 4-Epimerase In Complex With Nad+ Length = 348

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 72/181 (39%), Gaps = 26/181 (14%)
Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSI------NATVFPGSDSSHLFALPGAGDANLRV 63
           E V VTG  G+IG+  V  LL+  Y  +      NA    GS    L  +      ++  
Sbjct: 3   EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEF 62
Query: 64  FEADVLDSGAVSRAVE--GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF 121
            E D+LD GA+ R  +      V H A    + + V    +     + GT+ +LE  K  
Sbjct: 63  EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 122 GVRRVVVTSSISAI----------------VPNPGWKGKVFDETSWTDLEYCKSRKKWYP 165
           GV+ +V +SS +                    NP  K K F E    DL  C++ K W  
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDL--CQADKTWNA 180
Query: 166 V 166
           V
Sbjct: 181 V 181

>pdb|1HZJ|A Chain A, Human Udp-Galactose 4-Epimerase: Accommodation Of Udp-N- Acetylglucosamine Within The Active Site Length = 348

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 71/178 (39%), Gaps = 26/178 (14%)
Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSI------NATVFPGSDSSHLFALPGAGDANLRV 63
           E V VTG  G+IG+  V  LL+  Y  +      NA    GS    L  +      ++  
Sbjct: 3   EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEF 62
Query: 64  FEADVLDSGAVSRAVE--GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF 121
            E D+LD GA+ R  +      V H A    + + V    +     + GT+ +LE  K  
Sbjct: 63  EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 122 GVRRVVVTSSISAI----------------VPNPGWKGKVFDETSWTDLEYCKSRKKW 163
           GV+ +V +SS +                    NP  K K F E    DL  C++ K W
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDL--CQADKTW 178

>pdb|3AY3|A Chain A, Crystal Structure Of Glucuronic Acid Dehydrogeanse From Chromohalobacter Salexigens Length = 267

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 12/141 (8%)
Query: 55  GAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNV 114
           GA +A+  +   D+ D+ AV   V+ C G+ H+    ++E P +   +++   + G  N+
Sbjct: 38  GAAEAHEEIVACDLADAQAVHDLVKDCDGIIHLGG-VSVERPWN---DILQANIIGAYNL 93
Query: 115 LEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKA 174
            EAA+  G  R+V  SS   I   P         T+  D E  +     Y +SK   E  
Sbjct: 94  YEAARNLGKPRIVFASSNHTIGYYP--------RTTRIDTEVPRRPDSLYGLSKCFGEDL 145
Query: 175 AWEFAEKHGVDVVAIHPATCL 195
           A  +  K  ++ + I   +C 
Sbjct: 146 ASLYYHKFDIETLNIRIGSCF 166

>pdb|2B69|A Chain A, Crystal Structure Of Human Udp-Glucoronic Acid Decarboxylase Length = 343

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 16/194 (8%)
Query: 6   EKEEETVCVTGANGFIGTWLVKTL-LDNNYTSINATVFPGSDSSHLFALPGAGDANLRVF 64
           EK+ + + +TG  GF+G+ L   L  D +  ++    F G   +    +   G  N  + 
Sbjct: 24  EKDRKRILITGGAGFVGSHLTDKLXXDGHEVTVVDNFFTGRKRNVEHWI---GHENFELI 80
Query: 65  EADVLDSGAVSRAVEGCKGVFHVASPCTLED-PVDPEKELILPAVQGTLNVLEAAKRFGV 123
             DV++   +         ++H+ASP +  +   +P K L    + GTLN L  AKR G 
Sbjct: 81  NHDVVEPLYIE-----VDQIYHLASPASPPNYXYNPIKTLKTNTI-GTLNXLGLAKRVGA 134
Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
           R  ++ +S S +  +P    +   E  W  +     R   Y   K +AE   + + ++ G
Sbjct: 135 R--LLLASTSEVYGDPEVHPQ--SEDYWGHVNPIGPR-ACYDEGKRVAETXCYAYXKQEG 189
Query: 184 VDVVAIHPATCLGP 197
           V+V         GP
Sbjct: 190 VEVRVARIFNTFGP 203

>pdb|1Z74|A Chain A, Crystal Structure Of E.Coli Arna Dehydrogenase (Decarboxylase) Domain, R619y Mutant Length = 358

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 89/216 (41%), Gaps = 17/216 (7%)
Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
           +    V + G NGFIG  L + LL  ++  +      GSD+   F        +    E 
Sbjct: 11  RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI-GSDAISRFL----NHPHFHFVEG 65
Query: 67  DV-LDSGAVSRAVEGCKGVFHVASPCT-LEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           D+ + S  +   V+ C  V  + +  T +E   +P +   L   +  L ++    ++  R
Sbjct: 66  DISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFEL-DFEENLRIIRYCVKY--R 122
Query: 125 RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAAWEFAEKHG 183
           + ++  S S +        K FDE     +    ++ +W Y VSK L ++  W + EK G
Sbjct: 123 KRIIFPSTSEVYGM--CSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEG 180
Query: 184 VDVVAIHPATCLGP----LMQPYLNASCAVLQQLLQ 215
           +      P   +GP    L    + +S A+ Q +L 
Sbjct: 181 LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILN 216

>pdb|1U9J|A Chain A, Crystal Structure Of E. Coli Arna (Pmri) Decarboxylase Domain Length = 358

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 89/216 (41%), Gaps = 17/216 (7%)
Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
           +    V + G NGFIG  L + LL  ++  +      GSD+   F        +    E 
Sbjct: 11  RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI-GSDAISRFL----NHPHFHFVEG 65
Query: 67  DV-LDSGAVSRAVEGCKGVFHVASPCT-LEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           D+ + S  +   V+ C  V  + +  T +E   +P +   L   +  L ++    ++  R
Sbjct: 66  DISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFEL-DFEENLRIIRYCVKY--R 122
Query: 125 RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAAWEFAEKHG 183
           + ++  S S +        K FDE     +    ++ +W Y VSK L ++  W + EK G
Sbjct: 123 KRIIFPSTSEVYGM--CSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEG 180
Query: 184 VDVVAIHPATCLGP----LMQPYLNASCAVLQQLLQ 215
           +      P   +GP    L    + +S A+ Q +L 
Sbjct: 181 LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILN 216

>pdb|1Z7B|A Chain A, Crystal Structure Of E.Coli Arna Dehydrogenase (Decarboxylase) Domain, R619e Mutant Length = 358

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 89/216 (41%), Gaps = 17/216 (7%)
Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
           +    V + G NGFIG  L + LL  ++  +      GSD+   F        +    E 
Sbjct: 11  RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI-GSDAISRFL----NHPHFHFVEG 65
Query: 67  DV-LDSGAVSRAVEGCKGVFHVASPCT-LEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           D+ + S  +   V+ C  V  + +  T +E   +P +   L   +  L ++    ++  R
Sbjct: 66  DISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFEL-DFEENLRIIRYCVKY--R 122
Query: 125 RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAAWEFAEKHG 183
           + ++  S S +        K FDE     +    ++ +W Y VSK L ++  W + EK G
Sbjct: 123 KRIIFPSTSEVYGM--CSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEG 180
Query: 184 VDVVAIHPATCLGP----LMQPYLNASCAVLQQLLQ 215
           +      P   +GP    L    + +S A+ Q +L 
Sbjct: 181 LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILN 216

>pdb|1Z75|A Chain A, Crystal Structure Of Arna Dehydrogenase (decarboxylase) Domain, R619m Mutant Length = 358

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 89/216 (41%), Gaps = 17/216 (7%)
Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
           +    V + G NGFIG  L + LL  ++  +      GSD+   F        +    E 
Sbjct: 11  RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI-GSDAISRFL----NHPHFHFVEG 65
Query: 67  DV-LDSGAVSRAVEGCKGVFHVASPCT-LEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           D+ + S  +   V+ C  V  + +  T +E   +P +   L   +  L ++    ++  R
Sbjct: 66  DISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFEL-DFEENLRIIRYCVKY--R 122
Query: 125 RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAAWEFAEKHG 183
           + ++  S S +        K FDE     +    ++ +W Y VSK L ++  W + EK G
Sbjct: 123 KRIIFPSTSEVYGM--CSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEG 180
Query: 184 VDVVAIHPATCLGP----LMQPYLNASCAVLQQLLQ 215
           +      P   +GP    L    + +S A+ Q +L 
Sbjct: 181 LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILN 216

>pdb|2BLL|A Chain A, Apo-Structure Of The C-Terminal Decarboxylase Domain Of Arna Length = 345

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 88/211 (41%), Gaps = 17/211 (8%)
Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV-LD 70
           V + G NGFIG  L + LL  ++  +      GSD+   F        +    E D+ + 
Sbjct: 3   VLILGVNGFIGNHLTERLLREDHYEVYGLDI-GSDAISRFL----NHPHFHFVEGDISIH 57
Query: 71  SGAVSRAVEGCKGVFHVASPCT-LEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
           S  +   V+ C  V  + +  T +E   +P +   L   +  L ++    ++  R+ ++ 
Sbjct: 58  SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFEL-DFEENLRIIRYCVKY--RKRIIF 114
Query: 130 SSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAAWEFAEKHGVDVVA 188
            S S +        K FDE     +    ++ +W Y VSK L ++  W + EK G+    
Sbjct: 115 PSTSEVYGM--CSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTL 172
Query: 189 IHPATCLGP----LMQPYLNASCAVLQQLLQ 215
             P   +GP    L    + +S A+ Q +L 
Sbjct: 173 FRPFNWMGPRLDNLNAARIGSSRAITQLILN 203

>pdb|1Z7E|A Chain A, Crystal Structure Of Full Length Arna Length = 660

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 89/216 (41%), Gaps = 17/216 (7%)
Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
           +    V + G NGFIG  L + LL  ++  +      GSD+   F        +    E 
Sbjct: 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI-GSDAISRFL----NHPHFHFVEG 367
Query: 67  DV-LDSGAVSRAVEGCKGVFHVASPCT-LEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           D+ + S  +   V+ C  V  + +  T +E   +P +   L   +  L ++    ++  R
Sbjct: 368 DISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELD-FEENLRIIRYCVKY--R 424
Query: 125 RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAAWEFAEKHG 183
           + ++  S S +        K FDE     +    ++ +W Y VSK L ++  W + EK G
Sbjct: 425 KRIIFPSTSEVYGM--CSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEG 482
Query: 184 VDVVAIHPATCLGP----LMQPYLNASCAVLQQLLQ 215
           +      P   +GP    L    + +S A+ Q +L 
Sbjct: 483 LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILN 518

>pdb|1Z73|A Chain A, Crystal Structure Of E. Coli Arna Dehydrogenase (decarboxylase) Domain, S433a Mutant Length = 358

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 89/216 (41%), Gaps = 17/216 (7%)
Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
           +    V + G NGFIG  L + LL  ++  +      GSD+   F        +    E 
Sbjct: 11  RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI-GSDAISRFL----NHPHFHFVEG 65
Query: 67  DV-LDSGAVSRAVEGCKGVFHVASPCT-LEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           D+ + S  +   V+ C  V  + +  T +E   +P +   L   +  L ++    ++  R
Sbjct: 66  DISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFEL-DFEENLRIIRYCVKY--R 122
Query: 125 RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAAWEFAEKHG 183
           + ++  S + +        K FDE     +    ++ +W Y VSK L ++  W + EK G
Sbjct: 123 KRIIFPSTAEVYGM--CSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEG 180
Query: 184 VDVVAIHPATCLGP----LMQPYLNASCAVLQQLLQ 215
           +      P   +GP    L    + +S A+ Q +L 
Sbjct: 181 LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILN 216

>pdb|3RFT|A Chain A, Crystal Structure Of Uronate Dehydrogenase From Agrobacterium Tumefaciens Length = 267

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 12/135 (8%)
Query: 60  NLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAK 119
           N    + D+ D+ AV+  V GC G+ H+    ++E P +   +++   + G  N+ EAA+
Sbjct: 44  NEECVQCDLADANAVNAMVAGCDGIVHLGG-ISVEKPFE---QILQGNIIGLYNLYEAAR 99
Query: 120 RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFA 179
             G  R+V  SS   I          + +T     +        Y VSK   E  A  + 
Sbjct: 100 AHGQPRIVFASSNHTI--------GYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYF 151
Query: 180 EKHGVDVVAIHPATC 194
           +K G +   +   +C
Sbjct: 152 DKFGQETALVRIGSC 166

>pdb|1G1A|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb)from Salmonella Enterica Serovar Typhimurium Length = 361

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFE-ADVLD 70
           + +TG  GFIG+ +V+ ++ N   ++   +   + + +L +L    ++N   FE AD+ D
Sbjct: 3   ILITGGAGFIGSAVVRHIIKNTQDTV-VNIDKLTYAGNLESLSDISESNRYNFEHADICD 61
Query: 71  SGAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF 121
           S  ++R  E  +   V H+A+   ++  +      I   + GT  +LE A+++
Sbjct: 62  SAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKY 114

>pdb|3EHE|A Chain A, Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-1) From Archaeoglobus Fulgidus Length = 313

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTG  GFIG+ +V  L ++N   +   +  G++    F    A     R+ +AD L +
Sbjct: 4   IVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEE---FVNEAA-----RLVKAD-LAA 54
Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS 131
             +   ++G + V+H+A+   +    +   E+    V  T  +LEA ++ GV R+V TS+
Sbjct: 55  DDIKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTST 114
Query: 132 ISA-----IVPNP 139
            +      ++P P
Sbjct: 115 STVYGEAKVIPTP 127

>pdb|2PZK|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmg In Complex With Nad Length = 330

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 22/124 (17%)
Query: 12  VCVTGANGFIGTWLVK--------TLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRV 63
           + +TG  G +G+ L++         L+ +N+ +    V P          P AG   L V
Sbjct: 23  ILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLP----------PVAG---LSV 69
Query: 64  FEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
            E  V D+G + RA +  K    V S    +DP D   E     VQG++NV +AA + GV
Sbjct: 70  IEGSVTDAGLLERAFDSFKPTHVVHSAAAYKDP-DDWAEDAATNVQGSINVAKAASKAGV 128
Query: 124 RRVV 127
           +R++
Sbjct: 129 KRLL 132

>pdb|3AW9|A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant Length = 308

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 82/205 (40%), Gaps = 54/205 (26%)
Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTG  GFIG+ LV  L++  Y  +   +               G A L V +      
Sbjct: 3   IVVTGGAGFIGSHLVDKLVELGYEVVVVDIVQRDT---------GGSAELHVRDLKDYSW 53
Query: 72  GAVSRAVEGCKG--VFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR 125
           GA      G KG  VFH A+      +  +P+    E ++     T NVLE A++ GVR 
Sbjct: 54  GA------GIKGDVVFHFAANPEVRLSTTEPIVHFNENVV----ATFNVLEWARQTGVRT 103
Query: 126 VVVTSSISA-----IVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWE--- 177
           VV  SS +      ++P P                     + + P+S   A KAA E   
Sbjct: 104 VVFASSSTVYGDADVIPTP-------------------EEEPYKPISVYGAAKAAGEVMC 144
Query: 178 --FAEKHGVDVVAIHPATCLGPLMQ 200
             +A   GV  +A+  A  +GP ++
Sbjct: 145 ATYARLFGVRCLAVRYANVVGPRLR 169

>pdb|3ICP|A Chain A, Crystal Structure Of Udp-Galactose 4-Epimerase Length = 312

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 84/205 (40%), Gaps = 50/205 (24%)
Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTG  GFIG+ LV  L++  Y  +   V   S     F  P    A L V +      
Sbjct: 3   IVVTGGAGFIGSHLVDKLVELGYEVV--VVDNLSSGRREFVNP---SAELHVRDLKDYSW 57
Query: 72  GAVSRAVEGCKG--VFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR 125
           GA      G KG  VFH A+      +  +P+    E ++     T NVLE A++ GVR 
Sbjct: 58  GA------GIKGDVVFHFAANPEVRLSTTEPIVHFNENVV----ATFNVLEWARQTGVRT 107
Query: 126 VVVTSSISA-----IVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWE--- 177
           VV  SS +      ++P P                     + + P+S   A KAA E   
Sbjct: 108 VVFASSSTVYGDADVIPTP-------------------EEEPYKPISVYGAAKAAGEVMC 148
Query: 178 --FAEKHGVDVVAIHPATCLGPLMQ 200
             +A   GV  +A+  A  +GP ++
Sbjct: 149 ATYARLFGVRCLAVRYANVVGPRLR 173

>pdb|1Z45|A Chain A, Crystal Structure Of The Gal10 Fusion Protein Galactose MutarotaseUDP-Galactose 4-Epimerase From Saccharomyces Cerevisiae Complexed With Nad, Udp-Glucose, And Galactose Length = 699

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/258 (20%), Positives = 97/258 (37%), Gaps = 44/258 (17%)
Query: 4   EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRV 63
           ++E   + V VTG  G+IG+  V  L++N Y  + A     S    +  L      ++  
Sbjct: 6   QSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPF 65
Query: 64  FEADVLDSGAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF 121
           +E D+ D   + +  +  K   V H A    + +            + GT+ +LE  +++
Sbjct: 66  YEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY 125
Query: 122 GVRRVVVTSSISA---------IVP----------NPGWKGKVFDETSWTDLEYCKSRKK 162
            V + V +SS +          ++P          NP    K   E    DL        
Sbjct: 126 NVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYN------ 179
Query: 163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLG--PLMQPYLNASCAVLQQLLQGSKDT 220
                   ++K +W+FA     + +  HP+  +G  PL  P  N     + Q+  G ++ 
Sbjct: 180 --------SDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIP--NNLLPYMAQVAVGRREK 229
Query: 221 -----QEYHWLGAVPVKD 233
                 +Y      P++D
Sbjct: 230 LYIFGDDYDSRDGTPIRD 247

>pdb|1KEP|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb) From Streptococcus Suis With Dtdp-Xylose Bound Length = 348

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 9/133 (6%)
Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP----GSDSSHLFALPGAGDANLRVFE 65
           + + VTG  GFIG+  V  +  NN+  ++ TV        + ++L A+ G     + +  
Sbjct: 5   KNIIVTGGAGFIGSNFVHYVY-NNHPDVHVTVLDKLTYAGNKANLEAILGD---RVELVV 60
Query: 66  ADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR- 124
            D+ D+  V +       + H A+    ++ ++     I     GT  +LEAA+++ +R 
Sbjct: 61  GDIADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRF 120
Query: 125 RVVVTSSISAIVP 137
             V T  +   +P
Sbjct: 121 HHVSTDEVYGDLP 133

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	307
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	1e-124
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	1e-122
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	1e-122
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	6e-98
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	3e-66
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	5e-59
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	9e-31
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	5e-30
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	4e-28
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	4e-22
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	3e-21
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	3e-21
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	6e-21
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	3e-20
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	5e-20
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	6e-20
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	8e-20
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	2e-19
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	7e-19
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	1e-18
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	3e-18
1xq6_A	253	Unknown protein; structural genomics, protein stru	8e-18
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	1e-17
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	1e-17
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	6e-17
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	2e-16
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	3e-16
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	3e-16
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	3e-16
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	6e-16
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	9e-16
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	1e-15
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	7e-15
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	4e-14
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	2e-13
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	4e-13
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	5e-13
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	8e-13
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	3e-11
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	3e-11
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	5e-11
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	3e-10
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	6e-10
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	3e-09
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	3e-09
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	6e-09
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	3e-08
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	6e-08
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	1e-07
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	2e-07
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	2e-07
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	3e-07
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	5e-07
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	6e-07
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	7e-07
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	1e-06
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	1e-06
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	2e-06
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	8e-06
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	9e-06
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	9e-06
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	2e-05
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	2e-05
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	6e-05
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	7e-05
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	1e-04
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	2e-04
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	2e-04
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	2e-04
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	3e-04
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	4e-04
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	5e-04
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	7e-04

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score =  356 bits (916), Expect = e-124
 Identities = 102/292 (34%), Positives = 158/292 (54%), Gaps = 20/292 (6%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---SHLFALPGAG 57
           MA++    ++T CV G  GF+ + LVK LL   Y  +N TV    +    SHL  L   G
Sbjct: 1   MATQHPIGKKTACVVGGTGFVASLLVKLLLQKGYA-VNTTVRDPDNQKKVSHLLELQELG 59

Query: 58  DANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA 117
             +L++F AD+ D  +    + GC  VFHVA+P       DPE ++I PA+QG +NV++A
Sbjct: 60  --DLKIFRADLTDELSFEAPIAGCDFVFHVATPVHFASE-DPENDMIKPAIQGVVNVMKA 116

Query: 118 AKRF-GVRRVVVTSSISAIVPNPGWK-GKVFDETSWTDLEYCKSRKK---WYPVSKTLAE 172
             R   V+RV++TSS +A+  N     G V DE +WTD+E+  S K     YP SKTLAE
Sbjct: 117 CTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAE 176

Query: 173 KAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH-------- 224
           KAAW+FAE++ +D++ + P    G  +   + +S  +   L+ G++              
Sbjct: 177 KAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSG 236

Query: 225 WLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
            +    V+DV +A + + E  +ASGRY+C        + A+ +SK +P++ V
Sbjct: 237 SVSIAHVEDVCRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYKV 288

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score =  352 bits (905), Expect = e-122
 Identities = 104/284 (36%), Positives = 166/284 (58%), Gaps = 16/284 (5%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---SHLFALPGAG 57
           M S++E    TVCVTGA+GFIG+WLV  LL+  YT + ATV   ++     HL  LP A 
Sbjct: 1   MGSQSE----TVCVTGASGFIGSWLVMRLLERGYT-VRATVRDPTNVKKVKHLLDLPKAE 55

Query: 58  DANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA 117
             +L +++AD+ D G+   A++GC GVFHVA+P   E   DPE E+I P ++G L ++++
Sbjct: 56  T-HLTLWKADLADEGSFDEAIKGCTGVFHVATPMDFESK-DPENEVIKPTIEGMLGIMKS 113

Query: 118 AKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK---WYPVSKTLAEK 173
                 VRR+V TSS   +      +  V+DE+ W+D+E+C+++K     Y VSKTLAE+
Sbjct: 114 CAAAKTVRRLVFTSSAGTVNIQEH-QLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQ 172

Query: 174 AAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA-VPVK 232
           AAW++A+++ +D + I P   +GP +   +  S       + G++        G  V + 
Sbjct: 173 AAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLD 232

Query: 233 DVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
           D+  A + LFE+P A GRY+C++      D A+ + + +PE+ +
Sbjct: 233 DLCNAHIYLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNI 276

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score =  351 bits (903), Expect = e-122
 Identities = 98/275 (35%), Positives = 148/275 (53%), Gaps = 12/275 (4%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS----SHLFALPGAGDANLRVFE 65
             VCVTG  GF+G+W++K+LL+N Y+ +N T+    +     S L  LPGA +  L  F 
Sbjct: 2   GRVCVTGGTGFLGSWIIKSLLENGYS-VNTTIRADPERKRDVSFLTNLPGASE-KLHFFN 59

Query: 66  ADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VR 124
           AD+ +  + + A+EGC G+FH ASP       +PE+ +    V G L +L+A      V+
Sbjct: 60  ADLSNPDSFAAAIEGCVGIFHTASPIDFAVS-EPEEIVTKRTVDGALGILKACVNSKTVK 118

Query: 125 RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW---YPVSKTLAEKAAWEFAEK 181
           R + TSS SA+  N      V DE+ W+D++  +S K +   Y VSKTLAEKA  EF E+
Sbjct: 119 RFIYTSSGSAVSFNG-KDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ 177

Query: 182 HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLL 241
           +G+DVV +     +G  + P L  S      L+ G K+         V V DVA+A + L
Sbjct: 178 NGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYL 237

Query: 242 FESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV 276
            E+    GRY C+  I    + ++ +S  +PE+ +
Sbjct: 238 LENSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQI 272

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score =  291 bits (746), Expect = 6e-98
 Identities = 75/298 (25%), Positives = 117/298 (39%), Gaps = 27/298 (9%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---SHLFALPGAG 57
           + +    E   V VTGANGF+ + +V+ LL++ Y  +  T    S        +     G
Sbjct: 3   IDNAVLPEGSLVLVTGANGFVASHVVEQLLEHGYK-VRGTARSASKLANLQKRWDAKYPG 61

Query: 58  DANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA 117
                    D+L  GA    ++G  GV H+AS  +     +   E++ PA+ GTLN L A
Sbjct: 62  R-FETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSFS---NKYDEVVTPAIGGTLNALRA 117

Query: 118 AKRFG-VRRVVVTSSISAIV-PNPGWKGKVFDETSWTDLEYCKSRKK----------WYP 165
           A     V+R V+TSS  + + P P  +G   DE SW      K++             Y 
Sbjct: 118 AAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYA 177

Query: 166 VSKTLAEKAAWEFAEKHGV--DVVAIHPATCLGPLMQPY--LNASCAVLQQLLQGSKDTQ 221
            SKT AE AAW+F +++     + A+ P   +G +  P     ++   +  L  G     
Sbjct: 178 ASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPA 237

Query: 222 EYHWLGA--VPVKDVAKAQVLLFESPAASG-RYLCTNGIYQFGDFAERVSKLFPEFPV 276
                    V   D+    +     P     R   T G + +        KL+P    
Sbjct: 238 LALMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTF 295

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score =  210 bits (536), Expect = 3e-66
 Identities = 58/281 (20%), Positives = 100/281 (35%), Gaps = 17/281 (6%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
             V GA G +G    + +    +  +     P S    L  L            A++LD 
Sbjct: 16  YAVLGATGLLGHHAARAIRAAGHD-LVLIHRPSSQIQRLAYLE------PECRVAEMLDH 68

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS 131
             + RA+ G  GV   A       P   + E +  A+  T     A  +  V R++   S
Sbjct: 69  AGLERALRGLDGVIFSAGYYPS-RPRRWQ-EEVASALGQTNPFYAACLQARVPRILYVGS 126

Query: 132 ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHP 191
             A+  +P  +G    E  + D     S K  Y + K   ++ A E A ++G+ VV   P
Sbjct: 127 AYAMPRHP--QGLPGHEGLFYD--SLPSGKSSYVLCKWALDEQAREQA-RNGLPVVIGIP 181

Query: 192 ATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRY 251
              LG L       +  V+  +  G            +   +  +  ++  E      RY
Sbjct: 182 GMVLGEL--DIGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGRIGERY 239

Query: 252 LCTNGIYQFGDFAERVSKLFPEFPVHRFVFQSPLRFILWLA 292
           L T    +  D   R+++L  + P  + +  +  R +  L 
Sbjct: 240 LLTGHNLEMADLTRRIAELLGQ-PAPQPMSMAMARALATLG 279

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score =  187 bits (477), Expect = 5e-59
 Identities = 42/245 (17%), Positives = 88/245 (35%), Gaps = 36/245 (14%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            + + GA+GF+G+ L+   L+  +  + A V           +    + +L+V +ADV  
Sbjct: 6   KIVLIGASGFVGSALLNEALNRGFE-VTAVVRHPEK------IKIENE-HLKVKKADVSS 57

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
              V    +G   V    +P           ++    ++  L +++  K+ GV R ++  
Sbjct: 58  LDEVCEVCKGADAVISAFNP------GWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVG 111

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
              ++   PG +           ++  +  +   P  K L E       ++  +D V   
Sbjct: 112 GAGSLFIAPGLRL----------MDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFS 161

Query: 191 PATCLGPLMQP--YLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAAS 248
           PA  + P ++   Y      ++  ++  S           + V+D A A +   E P   
Sbjct: 162 PAADMRPGVRTGRYRLGKDDMIVDIVGNSH----------ISVEDYAAAMIDELEHPKHH 211

Query: 249 GRYLC 253
                
Sbjct: 212 QERFT 216

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score =  115 bits (290), Expect = 9e-31
 Identities = 41/191 (21%), Positives = 68/191 (35%), Gaps = 28/191 (14%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL 69
             + VTGA G +G+ +   L    +    + +             GA +A+  +   D+ 
Sbjct: 3   NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVD----------LGAAEAHEEIVACDLA 52

Query: 70  DSGAVSRAVEGCKGVFHVA---SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
           D+ AV   V+ C G+ H+          D +          + G  N+ EAA+  G  R+
Sbjct: 53  DAQAVHDLVKDCDGIIHLGGVSVERPWNDILQAN-------IIGAYNLYEAARNLGKPRI 105

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
           V  SS   I   P  +    D           S    Y +SK   E  A  +  K  ++ 
Sbjct: 106 VFASSNHTIGYYP--RTTRIDTEVPRR---PDSL---YGLSKCFGEDLASLYYHKFDIET 157

Query: 187 VAIHPATCLGP 197
           + I   +C   
Sbjct: 158 LNIRIGSCFPK 168

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score =  113 bits (285), Expect = 5e-30
 Identities = 46/188 (24%), Positives = 70/188 (37%), Gaps = 24/188 (12%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            + VTGA G +G  + + L                  + L  L  AG  N    + D+ D
Sbjct: 5   RLLVTGAAGQLGRVMRERLAPMAEILRL---------ADLSPLDPAGP-NEECVQCDLAD 54

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPA-VQGTLNVLEAAKRFGVRRVVVT 129
           + AV+  V GC G+ H+         V+   E IL   + G  N+ EAA+  G  R+V  
Sbjct: 55  ANAVNAMVAGCDGIVHLGG-----ISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFA 109

Query: 130 SSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAI 189
           SS   I   P  + +          +        Y VSK   E  A  + +K G +   +
Sbjct: 110 SSNHTIGYYP--QTERLGPDVPARPDGL------YGVSKCFGENLARMYFDKFGQETALV 161

Query: 190 HPATCLGP 197
              +C   
Sbjct: 162 RIGSCTPE 169

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score =  109 bits (275), Expect = 4e-28
 Identities = 61/284 (21%), Positives = 104/284 (36%), Gaps = 41/284 (14%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTG++G IGT LV  L +            G  +     +       ++    DV + 
Sbjct: 2   ILVTGSSGQIGTELVPYLAEKY----------GKKNVIASDIVQRDTGGIKFITLDVSNR 51

Query: 72  GAVSRAVE--GCKGVFHVA---SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
             + RAVE      +FH+A   S    +DP    K  +     GT N+LEAAK+  V +V
Sbjct: 52  DEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVNM----NGTYNILEAAKQHRVEKV 107

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
           V+ S+I    P            + T           + V+K  AE     + EK G+DV
Sbjct: 108 VIPSTIGVFGPET--PKNKVPSITITRPRT------MFGVTKIAAELLGQYYYEKFGLDV 159

Query: 187 VAIHPATCLGPLMQPYLNASC---AVLQQLLQGSK-----DTQEYHWLGAVPVKDVAKAQ 238
            ++     +    +P    +     +    ++  K            +  + + D  KA 
Sbjct: 160 RSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPM--MYMPDALKAL 217

Query: 239 VLLFESPAASGR----YLCTNGIYQFGDFAERVSKLFPEFPVHR 278
           V L+E+          Y  T   +   +   ++ +  PEF +  
Sbjct: 218 VDLYEADRDKLVLRNGYNVTAYTFTPSELYSKIKERIPEFEIEY 261

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 93.9 bits (234), Expect = 4e-22
 Identities = 53/273 (19%), Positives = 101/273 (36%), Gaps = 51/273 (18%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSI---N-ATVFPGSDSSHLFALPGA 56
           +  E   + +   +TG  GFIG+ L++TLL  +   +   N AT    +       +   
Sbjct: 19  LRKELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEK 78

Query: 57  GDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTL 112
             +N +  + D+ +    + A  G   V H A+    P ++ DP+      I     G L
Sbjct: 79  QWSNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNID----GFL 134

Query: 113 NVLEAAKRFGVRRVVVTSSISAI------VPNPGWKGKVFDETSWTDLEYCKSRKKWYPV 166
           N+L AA+   V+     +S S+       +P          E +        S    Y V
Sbjct: 135 NMLIAARDAKVQSFTYAAS-SSTYGDHPGLP--------KVEDTIGK---PLSP---YAV 179

Query: 167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVL----QQLLQGS----- 217
           +K + E  A  F+  +G   + +      G    P   A  AV+      ++QG      
Sbjct: 180 TKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNG-AYAAVIPKWTSSMIQGDDVYIN 238

Query: 218 ---KDTQEYHWLGAVPVKDVAKAQVLLFESPAA 247
              + ++++       +++  +A +L   +   
Sbjct: 239 GDGETSRDF-----CYIENTVQANLLAATAGLD 266

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 92.0 bits (229), Expect = 3e-21
 Identities = 58/292 (19%), Positives = 106/292 (36%), Gaps = 54/292 (18%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEAD 67
            V V G  GF+G+ LVK LL+     +   V    D   S+    +P      +R  E  
Sbjct: 34  NVMVVGGAGFVGSNLVKRLLELGVNQV--HVV---DNLLSAEKINVPD--HPAVRFSETS 86

Query: 68  VLDSGAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-G 122
           + D   ++   +    VFH+A+      ++ DP+   +   L     TL + E  K F  
Sbjct: 87  ITDDALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTL----TTLKLYERLKHFKR 142

Query: 123 VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH 182
           +++VV +++  +I        K  +ET    L    S    Y +SK   E  +  + ++H
Sbjct: 143 LKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDS---PYSMSKIFGEFYSVYYHKQH 199

Query: 183 GVDVVAIHPATCLGPLMQPYLNASC--------AV----LQQLLQG-----------SKD 219
            +  V        GP                   V    + + L+G           ++D
Sbjct: 200 QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRD 259

Query: 220 TQEYHWLGAVPVKDVAKAQVLLFESPAASGRY-LCTNGIYQFGDFAERVSKL 270
                +   + V+DVA   +         G Y + +       D A +++++
Sbjct: 260 -----F---IFVEDVANGLIACAADGTPGGVYNIASGKETSIADLATKINEI 303

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 90.7 bits (226), Expect = 3e-21
 Identities = 43/276 (15%), Positives = 94/276 (34%), Gaps = 53/276 (19%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + VTG  GF+G ++V+++ ++  T I          S    +      +     +D    
Sbjct: 5   IAVTGGTGFLGQYVVESIKNDGNTPI------ILTRS----IGNKAINDYEYRVSDYTLE 54

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPV-DPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
             +   +     V H+A+    +  + +            T N+ +A     +  +V  S
Sbjct: 55  DLI-NQLNDVDAVVHLAATRGSQGKISEFHDN-----EILTQNLYDACYENNISNIVYAS 108

Query: 131 SISA-----IVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVD 185
           +ISA      +P        ++E      +        Y VSK   E     ++ K G+ 
Sbjct: 109 TISAYSDETSLP--------WNEKELPLPDLM------YGVSKLACEHIGNIYSRKKGLC 154

Query: 186 VVAIHPATCLGPLMQPYLNASCAV---LQQLLQGSK-----D-TQEYHWLGAVPVKDVAK 236
           +  +  A   G   +     +  +    +Q   G +     +   +  +   +  KD AK
Sbjct: 155 IKNLRFAHLYGFNEKN----NYMINRFFRQAFHGEQLTLHANSVAKREF---LYAKDAAK 207

Query: 237 AQVLLFESPAASGRY-LCTNGIYQFGDFAERVSKLF 271
           + +   +    SG + + +       + A  ++  F
Sbjct: 208 SVIYALKQEKVSGTFNIGSGDALTNYEVANTINNAF 243

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 90.6 bits (224), Expect = 6e-21
 Identities = 35/257 (13%), Positives = 67/257 (26%), Gaps = 16/257 (6%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
              + G  G IG  L + L   +       V+  +  +         D  +   + D+ D
Sbjct: 3   VALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHE---DNPINYVQCDISD 59

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
                  +     V HV            E+E      +   NVL+A          ++ 
Sbjct: 60  PDDSQAKLSPLTDVTHVFYVTWA--NRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISL 117

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
                     ++     E+          R K+      L +    E  +K G+      
Sbjct: 118 QTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSVHR 177

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG----------AVPVKDVAKAQVL 240
           P    G      +N    +         + +   + G                +A+  + 
Sbjct: 178 PGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIW 237

Query: 241 LFESPAASGR-YLCTNG 256
               P A    +  +NG
Sbjct: 238 AAVDPYAKNEAFNVSNG 254

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 88.0 bits (219), Expect = 3e-20
 Identities = 56/294 (19%), Positives = 84/294 (28%), Gaps = 66/294 (22%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSI---NATVFPGSDSSHLFALPGAGDANLRVFEAD 67
            + +TG  GFIG  L + L+ +        +  V P                  +  E  
Sbjct: 9   RILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGT----------GKFLEKP 58

Query: 68  VLDSGAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
           VL+     R +   + V+H+AS    P + + P+D         V    ++L      GV
Sbjct: 59  VLE--LEERDLSDVRLVYHLASHKSVPRSFKQPLDYLD-----NVDSGRHLLALCTSVGV 111

Query: 124 RRVVVTSSISAI------VPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWE 177
            +VVV S+   +      +P          E S             Y  SK   E  A  
Sbjct: 112 PKVVVGST-CEVYGQADTLP--------TPEDSPLSPRSP------YAASKVGLEMVAGA 156

Query: 178 FAEKHGVDVVAI-HPATCLGPLMQPYLNASCAV---LQQLLQGSKDTQEYHWLGA----- 228
                    V I       GP  +P  +A   V      LL  ++        G      
Sbjct: 157 HQRASVAPEVGIVRFFNVYGPGERP--DA--LVPRLCANLLTRNELPV----EGDGEQRR 208

Query: 229 --VPVKDVAKAQVLLFESPAASGRY-LCTNGIYQFGDFAERVSKLFPEFPVHRF 279
               + DV    V L   P         +       D    +    P   V R 
Sbjct: 209 DFTYITDVVDKLVALANRP-LPSVVNFGSGQSLSVNDVIRILQATSPAAEVARK 261

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 88.2 bits (219), Expect = 5e-20
 Identities = 34/203 (16%), Positives = 67/203 (33%), Gaps = 18/203 (8%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + +TGA GFI + + + L    +  I +        +           +LRV E      
Sbjct: 32  ISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVME------ 85

Query: 72  GAVSRAVEGCKGVFHVASPC-----TLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
               +  EG   VF++A+          +       ++      + N++EAA+  G++R 
Sbjct: 86  -NCLKVTEGVDHVFNLAADMGGMGFIQSNHS----VIMYNNTMISFNMIEAARINGIKRF 140

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
              SS + I P              +D  +    +  + + K   E+    + +  G++ 
Sbjct: 141 FYASS-ACIYPEFKQLETTNVSLKESDA-WPAEPQDAFGLEKLATEELCKHYNKDFGIEC 198

Query: 187 VAIHPATCLGPLMQPYLNASCAV 209
                    GP          A 
Sbjct: 199 RIGRFHNIYGPFGTWKGGREKAP 221

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 87.3 bits (217), Expect = 6e-20
 Identities = 58/268 (21%), Positives = 90/268 (33%), Gaps = 61/268 (22%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEAD 67
            V +TG  G IG+ + + LL+     +      G D   +     L      NL   E  
Sbjct: 23  KVFITGICGQIGSHIAELLLERGDKVV------GIDNFATGRREHLKD--HPNLTFVEGS 74

Query: 68  VLDSGAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPA---VQGTLNVLEAAKRFG 122
           + D   V++ +   +   V H A   + +DP D              G  NV++AAK+  
Sbjct: 75  IADHALVNQLIGDLQPDAVVHTA--ASYKDPDDW----YNDTLTNCVGGSNVVQAAKKNN 128

Query: 123 VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH 182
           V R V   +       P    +        +          Y +SK+  E     + E  
Sbjct: 129 VGRFVYFQTALCYGVKP--IQQPVRLDHPRN-----PANSSYAISKSANED----YLEYS 177

Query: 183 GVDVVAIHPATCLGPLMQPYLNASCAVL----QQLLQGSKDTQEYHWLGA-----VPVKD 233
           G+D V    A  +GP            L    Q+L +G K       +       V VKD
Sbjct: 178 GLDFVTFRLANVVGPRNVS------GPLPIFFQRLSEGKKCF-----VTKARRDFVFVKD 226

Query: 234 VAKAQVLLFESPAASGRYLCTNGIYQFG 261
           +A+A V   +           +G Y F 
Sbjct: 227 LARATVRAVDGVG--------HGAYHFS 246

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score = 86.8 bits (216), Expect = 8e-20
 Identities = 48/262 (18%), Positives = 88/262 (33%), Gaps = 58/262 (22%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEAD 67
            + VTG  GFIG+ +V  L ++N       V    D   S +   +        R+ +AD
Sbjct: 3   LIVVTGGAGFIGSHVVDKLSESN----EIVVI---DNLSSGNEEFVN----EAARLVKAD 51

Query: 68  VLDSGAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
           +     +   ++G + V+H+A+        E+P +  +      V  T  +LEA ++ GV
Sbjct: 52  LAAD-DIKDYLKGAEEVWHIAANPDVRIGAENPDEIYRN----NVLATYRLLEAMRKAGV 106

Query: 124 RRVVVTSSISAI------VPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWE 177
            R+V TS+ S +      +P P        E   T           Y  SK   E     
Sbjct: 107 SRIVFTST-STVYGEAKVIPTP--------EDYPTHPISL------YGASKLACEALIES 151

Query: 178 FAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK-----D-TQE--YHWLGAV 229
           +     +       A  +G     +      +++      +     +  Q   Y     +
Sbjct: 152 YCHTFDMQAWIYRFANVIGR-RSTHGVIYDFIMKLKRNPEELEILGNGEQNKSY-----I 205

Query: 230 PVKDVAKAQVLLFESPAASGRY 251
            + D   A +           +
Sbjct: 206 YISDCVDAMLFGLRGDERVNIF 227

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 86.3 bits (214), Expect = 2e-19
 Identities = 54/299 (18%), Positives = 95/299 (31%), Gaps = 56/299 (18%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINAT--------VFPGSDSSHLFALPGAGDANLR 62
            + + GA G +G  L + L+ +                  P +        P      + 
Sbjct: 16  HIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEA--------PAGFSGAVD 67

Query: 63  VFEADVLDSGAVSRAVE-GCKGVFHVASPCTLEDPVDPEKELILPA----VQGTLNVLEA 117
              AD+   G   + VE     +FH+A+  + E  +D +K          + GT  + +A
Sbjct: 68  ARAADLSAPGEAEKLVEARPDVIFHLAAIVSGEAELDFDK-----GYRINLDGTRYLFDA 122

Query: 118 AKRFGVR-----RVVVTSSISAI-VPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLA 171
            +    +     RVV TSSI+    P P        +   T      +    Y   K + 
Sbjct: 123 IRIANGKDGYKPRVVFTSSIAVFGAPLP----YPIPDEFHTT---PLTS---YGTQKAIC 172

Query: 172 EKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNAS---CAVLQQLLQGSK-----DTQEY 223
           E    +++ +   D + I   T      +P   AS     +L++ L G +          
Sbjct: 173 ELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIR 232

Query: 224 HWLGAVPVKDVAKAQVLLFESPAA---SGRYLCTNGI-YQFGDFAERVSKLFPEFPVHR 278
           HW      +      +             R L   G+    G+  E + K+  E  V  
Sbjct: 233 HWH--ASPRSAVGFLIHGAMIDVEKVGPRRNLSMPGLSATVGEQIEALRKVAGEKAVAL 289

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345

 Score = 84.8 bits (210), Expect = 7e-19
 Identities = 55/311 (17%), Positives = 99/311 (31%), Gaps = 68/311 (21%)

Query: 12  VCVTGANGFIGTWLVKTLL----------DNNYTSINATVFPGSDSSHLFALPGAGDANL 61
           V + G NGFIG  L + LL          D    +I          S     P     + 
Sbjct: 3   VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAI----------SRFLNHP-----HF 47

Query: 62  RVFEADV-LDSGAVSRAVEGCKGVFHVASPCT----LEDPVDPEKELILPAVQGTLNVLE 116
              E D+ + S  +   V+ C  V  + +  T      +P+     +     +  L ++ 
Sbjct: 48  HFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPL----RVFELDFEENLRIIR 103

Query: 117 AAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAA 175
              ++  R  ++  S S +        K FDE     +    ++ +W Y VSK L ++  
Sbjct: 104 YCVKYRKR--IIFPSTSEVYGMC--SDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 159

Query: 176 WEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAV-------LQQLLQGSKDT------QE 222
           W + EK G+      P   +GP +     A           +  L++GS         Q+
Sbjct: 160 WAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQK 219

Query: 223 ----YHWLGAVPVKDVAKAQVLLFESPAASGRYLCTN-----GIYQFGDFAERVSKLFPE 273
                       ++D  +A   + E+          N           +  E +   F +
Sbjct: 220 RCFTD-------IRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEK 272

Query: 274 FPVHRFVFQSP 284
            P+        
Sbjct: 273 HPLRHHFPPFA 283

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 81.6 bits (202), Expect = 1e-18
 Identities = 40/249 (16%), Positives = 71/249 (28%), Gaps = 47/249 (18%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            + + GA G  G   +   +   Y  +   V    DSS L +          V   DVL 
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYE-VTVLV---RDSSRLPSEGPRP---AHVVVGDVLQ 57

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
           +  V + V G   V  +       + + P   +     +G  N++ A K  GV +VV  +
Sbjct: 58  AADVDKTVAGQDAVIVLLGT---RNDLSPTTVM----SEGARNIVAAMKAHGVDKVVACT 110

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
           S   +        ++   T                           +   + G+  VA+ 
Sbjct: 111 SAFLLWDPTKVPPRLQAVTDD----------------HIRMH----KVLRESGLKYVAVM 150

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGR 250
           P      +    L  +  V       S           +   D+    +    +    G 
Sbjct: 151 P----PHIGDQPLTGAYTVTLDGRGPS---------RVISKHDLGHFMLRCLTTDEYDGH 197

Query: 251 YLCTNGIYQ 259
               +  YQ
Sbjct: 198 STYPSHQYQ 206

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372

 Score = 82.9 bits (205), Expect = 3e-18
 Identities = 52/316 (16%), Positives = 103/316 (32%), Gaps = 70/316 (22%)

Query: 11  TVCVTGANGFIGTWLVKTLL---------DNNYTSINATVFPGSDSSHLFALPGAGDANL 61
            V + G NGFIG  L K +L          +  T              L          +
Sbjct: 26  KVLILGVNGFIGHHLSKRILETTDWEVFGMDMQT---------DRLGDLVKHE-----RM 71

Query: 62  RVFEADV-LDSGAVSRAVEGCKGVFHVASPCT----LEDPVDPEKELILPAVQGTLNVLE 116
             FE D+ ++   V   V+ C  +  + +  T    ++ P+     +     +  L ++ 
Sbjct: 72  HFFEGDITINKEWVEYHVKKCDVILPLVAIATPATYVKQPL----RVFELDFEANLPIVR 127

Query: 117 AAKRFGVRRVVV-TSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKA 174
           +A ++G   V   TS +  +  +  +        ++  +   K R  W Y  SK L ++ 
Sbjct: 128 SAVKYGKHLVFPSTSEVYGMCADEQFDPDA-SALTYGPIN--KPR--WIYACSKQLMDRV 182

Query: 175 AWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAV-------LQQLLQGSKDT------Q 221
            W +    G++     P   +GP +                 L  +++G   +      Q
Sbjct: 183 IWGYG-MEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQ 241

Query: 222 E----YHWLGAVPVKDVAKAQVLLFESPAASGRYLCTN-----GIYQFGDFAERVSKLFP 272
           +    Y       V D   A + + E+          N       +   + A ++ +L  
Sbjct: 242 KRAFTY-------VDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAA 294

Query: 273 EFPVHRFVFQSPLRFI 288
           EFP         ++ +
Sbjct: 295 EFPE-YADSAKRVKLV 309

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 80.3 bits (198), Expect = 8e-18
 Identities = 50/255 (19%), Positives = 78/255 (30%), Gaps = 49/255 (19%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYT-SINATVFPGSDSSHLFALPGAGDANLRVFEADV 68
            TV VTGA+G  G  + K L + +        V        +            VF  D+
Sbjct: 5   PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-------EADVFIGDI 57

Query: 69  LDSGAVSRAVEGCKGVFHVAS----------PCTLEDPVDPEKELILPA---VQGTLNVL 115
            D+ +++ A +G   +  + S          P     P    ++   P      G  N +
Sbjct: 58  TDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQI 117

Query: 116 EAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAA 175
           +AAK  GV+ +VV  S+    P+                           V K  AE+  
Sbjct: 118 DAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGN---------------ILVWKRKAEQY- 161

Query: 176 WEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVA 235
                  G     I      G L+           ++LL G  D         VP  DVA
Sbjct: 162 ---LADSGTPYTIIRA----GGLLDKEGGV-----RELLVGKDDELLQTDTKTVPRADVA 209

Query: 236 KAQVLLFESPAASGR 250
           +  +       A  +
Sbjct: 210 EVCIQALLFEEAKNK 224

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score = 80.8 bits (200), Expect = 1e-17
 Identities = 48/283 (16%), Positives = 94/283 (33%), Gaps = 38/283 (13%)

Query: 12  VCVTGANGFIGTWLVKTLLD-NNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           + + GA G IGT L + L       ++ A        S +  L      +      + LD
Sbjct: 5   ILIIGACGQIGTELTQKLRKLYGTENVIA--------SDIRKLNTDVVNSGPFEVVNALD 56

Query: 71  SGAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPA---VQGTLNVLEAAKRFGVRR 125
              +   VE  K   ++ +A+  +       EK         +    +VL  AK   +++
Sbjct: 57  FNQIEHLVEVHKITDIYLMAALLS----ATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKK 112

Query: 126 VVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR-KKWYPVSKTLAEKAAWEFAEKHGV 184
           +   SSI+   P      K          +Y        Y +SK   E+    +   +GV
Sbjct: 113 IFWPSSIAVFGPTT---PKENTP------QYTIMEPSTVYGISKQAGERWCEYYHNIYGV 163

Query: 185 DVVAIHPATCLGPLMQP---YLNASCAVLQQLLQGSKDT---QEYHWLGAVPVKDVAKAQ 238
           DV +I     +     P     + +  +  + +   K          +  + + D   A 
Sbjct: 164 DVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDAT 223

Query: 239 VLLFESPAASGRYLCTNGIYQF----GDFAERVSKLFPEFPVH 277
           + + ++P    +   +  +        + A  + K  PEF + 
Sbjct: 224 INIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKKHIPEFTIT 266

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 81.1 bits (201), Expect = 1e-17
 Identities = 43/219 (19%), Positives = 77/219 (35%), Gaps = 41/219 (18%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYT-----SINATVFPGSDSS---HLFA 52
           +  +     +T  +TG  GFIG+ L++ LL  N       + +     G   +       
Sbjct: 17  ITQQLIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFS----TGHQYNLDEVKTL 72

Query: 53  LPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAV 108
           +     +     E D+ D     + ++G   V H A+    P ++ DP+          +
Sbjct: 73  VSTEQWSRFCFIEGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNAT----NI 128

Query: 109 QGTLNVLEAAKRFGVRRVVVTSSISAI------VPNPGWKGKVFDETSWTDLEYCKSRKK 162
            G LN+L AAK   V+     +S S+       +P          E +        +   
Sbjct: 129 TGFLNILHAAKNAQVQSFTYAAS-SSTYGDHPALP--------KVEEN------IGNPLS 173

Query: 163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP 201
            Y V+K + E  A  +A  +G   + +      G    P
Sbjct: 174 PYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDP 212

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score = 78.7 bits (195), Expect = 6e-17
 Identities = 59/264 (22%), Positives = 91/264 (34%), Gaps = 68/264 (25%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEADV 68
           + VTG  GFIG+ LV  L++  Y      V    D   S     +      +  +   D+
Sbjct: 3   IVVTGGAGFIGSHLVDKLVELGYE---VVVV---DNLSSGRREFVN----PSAELHVRDL 52

Query: 69  LDSGAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
            D      A      VFH A+      +  +P+    E     V  T NVLE A++ GVR
Sbjct: 53  KDYSWG--AGIKGDVVFHFAANPEVRLSTTEPIVHFNE----NVVATFNVLEWARQTGVR 106

Query: 125 RVVVTSSISAI------VPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEF 178
            VV  SS S +      +P          E               Y  +K   E     +
Sbjct: 107 TVVFASS-STVYGDADVIP--------TPEEEPYKPISV------YGAAKAAGEVMCATY 151

Query: 179 AEKHGVDVVAIHPATCLGPLMQPYLNASCAV----LQQLLQGSK------D-TQE--YHW 225
           A   GV  +A+  A  +GP ++        V    + +L +         D TQ   Y  
Sbjct: 152 ARLFGVRCLAVRYANVVGPRLRH------GVIYDFIMKLRRNPNVLEVLGDGTQRKSY-- 203

Query: 226 LGAVPVKDVAKAQVLLFESPAASG 249
              + V+D  +A +  ++      
Sbjct: 204 ---LYVRDAVEATLAAWKKFEEMD 224

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 76.2 bits (188), Expect = 2e-16
 Identities = 43/241 (17%), Positives = 81/241 (33%), Gaps = 50/241 (20%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           V V GANG +  +L+  L +  +    A V        L    GA D    +  A++ + 
Sbjct: 24  VLVVGANGKVARYLLSELKNKGHE-PVAMVRNEEQGPELRER-GASD----IVVANLEED 77

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAV--QGTLNVLEAAKRFGVRRVVVT 129
              S A      V   A                   +   G +  ++ A++ G++R ++ 
Sbjct: 78  --FSHAFASIDAVVFAAGSGPHTGADKTI------LIDLWGAIKTIQEAEKRGIKRFIMV 129

Query: 130 SSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAI 189
           SS+  + P+ G                     + Y V+K LA+    +  ++  +D   +
Sbjct: 130 SSVGTVDPDQGPMN-----------------MRHYLVAKRLAD----DELKRSSLDYTIV 168

Query: 190 HPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASG 249
            P    GPL             ++      ++      ++   DVAK    L +     G
Sbjct: 169 RP----GPLSNE------ESTGKVTVSPHFSE---ITRSITRHDVAKVIAELVDQQHTIG 215

Query: 250 R 250
           +
Sbjct: 216 K 216

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 75.6 bits (186), Expect = 3e-16
 Identities = 35/237 (14%), Positives = 73/237 (30%), Gaps = 48/237 (20%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V + GA G I   ++  L D                + +           ++   DVL+
Sbjct: 25  NVLILGAGGQIARHVINQLADKQTIKQTLFA---RQPAKIHKPYPTN---SQIIMGDVLN 78

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
             A+ +A++G   V+   +     + +D              +V+ A K   V+R++   
Sbjct: 79  HAALKQAMQGQDIVYANLTG----EDLDI----------QANSVIAAMKACDVKRLIFVL 124

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
           S+      PG   +  +      L+                 + A +  E  G++   + 
Sbjct: 125 SLGIYDEVPGKFVEWNNAVIGEPLK---------------PFRRAADAIEASGLEYTILR 169

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAA 247
           P          +L     +  +L   ++  +       V  K VA     + + P  
Sbjct: 170 P---------AWLTDEDIIDYELTSRNEPFKG----TIVSRKSVAALITDIIDKPEK 213

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 75.4 bits (185), Expect = 3e-16
 Identities = 28/239 (11%), Positives = 69/239 (28%), Gaps = 35/239 (14%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + + GA G  G+ +++   +  +  + A V    ++  +         ++ + + D+ D 
Sbjct: 3   IGIIGATGRAGSRILEEAKNRGHE-VTAIV---RNAGKITQTH----KDINILQKDIFD- 53

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS 131
                 +     V         E             V    +++         R++V   
Sbjct: 54  -LTLSDLSDQNVVVDAYGISPDEAEKH---------VTSLDHLISVLNGTVSPRLLVVGG 103

Query: 132 ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHP 191
            +++  +      + +     +  Y        P ++  A++     + +       I P
Sbjct: 104 AASLQIDED-GNTLLESKGLREAPYY-------PTARAQAKQLEHLKSHQAEFSWTYISP 155

Query: 192 ATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGR 250
           +    P               LL GS           + ++D A A +   E P     
Sbjct: 156 SAMFEP--GERTGDYQIGKDHLLFGSDGN------SFISMEDYAIAVLDEIERPNHLNE 206

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 75.0 bits (185), Expect = 3e-16
 Identities = 40/244 (16%), Positives = 80/244 (32%), Gaps = 58/244 (23%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV-LD 70
           + + G+ G +G  L+K+L   +Y  I A          +                DV   
Sbjct: 3   IFIVGSTGRVGKSLLKSLSTTDYQ-IYAGA---RKVEQVPQYNNVK-----AVHFDVDWT 53

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
              +++ + G   + +V+            K      + G + +++AA++  V+R ++ S
Sbjct: 54  PEEMAKQLHGMDAIINVSGS----GGKSLLK----VDLYGAVKLMQAAEKAEVKRFILLS 105

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
           +I ++ P   W G  FD              K Y ++K  A+       ++  +D   I 
Sbjct: 106 TIFSLQP-EKWIGAGFDAL------------KDYYIAKHFADLYL---TKETNLDYTIIQ 149

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY----HWLGAVPVKDVAKAQVLLFESPA 246
           P                      L   + T           +  + DVA     L  +  
Sbjct: 150 PGA--------------------LTEEEATGLIDINDEVSASNTIGDVADTIKELVMTDH 189

Query: 247 ASGR 250
           + G+
Sbjct: 190 SIGK 193

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 76.5 bits (188), Expect = 6e-16
 Identities = 36/208 (17%), Positives = 61/208 (29%), Gaps = 57/208 (27%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + +TGA GF+G  L   L                              +  +FE      
Sbjct: 3   IVITGAKGFVGKNLKADLTSTT--------------------------DHHIFEVHRQTK 36

Query: 72  GA-VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV-VT 129
              +  A+     + H+A     E   +         V    +VL+   R   +  + ++
Sbjct: 37  EEELESALLKADFIVHLAGVNRPEHDKEFSLG----NVSYLDHVLDILTRNTKKPAILLS 92

Query: 130 SSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAI 189
           SSI A   NP                        Y  SK   E+   E+AE++G  V   
Sbjct: 93  SSIQATQDNP------------------------YGESKLQGEQLLREYAEEYGNTVYIY 128

Query: 190 HPATCLGPLMQP-YLNASCAVLQQLLQG 216
                 G   +P Y +       ++ + 
Sbjct: 129 RWPNLFGKWCKPNYNSVIATFCYKIARN 156

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 73.9 bits (181), Expect = 9e-16
 Identities = 34/238 (14%), Positives = 61/238 (25%), Gaps = 45/238 (18%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            + + GA G I   L  TLL      I                       + V E    +
Sbjct: 7   YITILGAAGQIAQXLTATLLTYTDMHITLYG---RQLKTRIPPEIIDHERVTVIEGSFQN 63

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
            G + +AV   + VF  A                  +     ++++A  R  +RRV+  S
Sbjct: 64  PGXLEQAVTNAEVVFVGAM----------------ESGSDMASIVKALSRXNIRRVIGVS 107

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
                   P    K                    P+S    E+ A     +  ++   + 
Sbjct: 108 MAGLSGEFPVALEKW--------------TFDNLPISYVQGERQARNVLRESNLNYTILR 153

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAAS 248
                  L          ++ +                V  + V KA   +  +   +
Sbjct: 154 L----TWLYNDPEXTDYELIPE--------GAQFNDAQVSREAVVKAIFDILHAADET 199

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 74.9 bits (185), Expect = 1e-15
 Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 23/134 (17%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEAD 67
            V VTG  GFIG+ +V+ LL          V    D   +     +P      +  F  D
Sbjct: 2   RVLVTGGAGFIGSHIVEDLLARGLE---VAVL---DNLATGKRENVP----KGVPFFRVD 51

Query: 68  VLDSGAVSRAVEGCK--GVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRF 121
           + D   V RA    +   V H A+      ++EDPV   +      + G LN+LEA +++
Sbjct: 52  LRDKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEV----NLLGGLNLLEACRQY 107

Query: 122 GVRRVVVTSSISAI 135
           GV ++V  S+  AI
Sbjct: 108 GVEKLVFASTGGAI 121

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 73.0 bits (180), Expect = 7e-15
 Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 24/130 (18%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEAD 67
            + +TG  G +G+ L++  L   +      V    D   +     LP    A L V E  
Sbjct: 22  RILITGGAGCLGSNLIEHWLPQGHE---ILVI---DNFATGKREVLPPV--AGLSVIEGS 73

Query: 68  VLDSGAVSRAVEGCK--GVFHVA----SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF 121
           V D+G + RA +  K   V H A     P   +D  +         VQG++NV +AA + 
Sbjct: 74  VTDAGLLERAFDSFKPTHVVHSAAAYKDP---DDWAEDAAT----NVQGSINVAKAASKA 126

Query: 122 GVRRVVVTSS 131
           GV+R++   +
Sbjct: 127 GVKRLLNFQT 136

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 69.3 bits (169), Expect = 4e-14
 Identities = 33/240 (13%), Positives = 58/240 (24%), Gaps = 35/240 (14%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSHLFALPGAGDANLRVFEADVLD 70
           + V GA G  G+ +V       +      V     D        GA      V       
Sbjct: 3   IAVLGATGRAGSAIVAEARRRGHE-----VLAVVRDPQKAADRLGAT-----VATLVKEP 52

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
                  ++    V    S      P    +  +   +    +++   +      V +  
Sbjct: 53  LVLTEADLDSVDAVVDALSV-----PWGSGRGYL--HLDFATHLVSLLRNSDTLAVFILG 105

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
           S S  +P         D     D     + + WY  +                V+ + I 
Sbjct: 106 SASLAMPGA-------DHPMILDFPESAASQPWYDGALYQYY-EYQFLQMNANVNWIGIS 157

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGR 250
           P+            A    L     G            +   ++A A +   E P A   
Sbjct: 158 PSEAFPSGPATSYVAGKDTLLVGEDGQ---------SHITTGNMALAILDQLEHPTAIRD 208

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343

 Score = 69.0 bits (169), Expect = 2e-13
 Identities = 48/212 (22%), Positives = 83/212 (39%), Gaps = 44/212 (20%)

Query: 6   EKEEETVCVTGANGFIGTWLVKTLL---------DNNYTSINATVFPGSDS--SHLFALP 54
           EK+ + + +TG  GF+G+ L   L+         DN +T        G      H     
Sbjct: 24  EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT--------GRKRNVEHWIGHE 75

Query: 55  GAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCT----LEDPVDPEKELILPAVQG 110
                N  +   DV++   +         ++H+ASP +    + +P+    + +     G
Sbjct: 76  -----NFELINHDVVEPLYIE-----VDQIYHLASPASPPNYMYNPI----KTLKTNTIG 121

Query: 111 TLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKT 169
           TLN+L  AKR G R  ++ +S S +  +P  +     E  W  +     R    Y   K 
Sbjct: 122 TLNMLGLAKRVGAR--LLLASTSEVYGDP--EVHPQSEDYWGHVNPIGPR--ACYDEGKR 175

Query: 170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP 201
           +AE   + + ++ GV+V         GP M  
Sbjct: 176 VAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 207

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 67.8 bits (166), Expect = 4e-13
 Identities = 45/270 (16%), Positives = 85/270 (31%), Gaps = 56/270 (20%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATV-FPGSDSSHLFALPGAGDANLRVFEADVL 69
            V V G  G  G  + +TLL++    +      P   ++    L GA      V + D  
Sbjct: 7   LVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGA-----EVVQGDQD 61

Query: 70  DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
           D   +  A+ G    F V +     +    E+E+     QG   + + A+R G+  VV +
Sbjct: 62  DQVIMELALNGAYATFIVTNY---WESCSQEQEV----KQGK-LLADLARRLGLHYVVYS 113

Query: 130 SSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAI 189
              +         G++                  +   K   E    E+    GV + ++
Sbjct: 114 GLENI---KKLTAGRL---------------AAAHFDGKGEVE----EYFRDIGVPMTSV 151

Query: 190 HPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP--------VKDVAKAQVLL 241
                     +  L+        L Q + D + Y               V D+    + L
Sbjct: 152 RL----PCYFENLLS------HFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSL 201

Query: 242 FESPAASG--RYLCTNGIYQFGDFAERVSK 269
            + P          +   +   ++A  ++K
Sbjct: 202 LKMPEKYVGQNIGLSTCRHTAEEYAALLTK 231

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score = 67.7 bits (166), Expect = 5e-13
 Identities = 53/302 (17%), Positives = 93/302 (30%), Gaps = 39/302 (12%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAG 57
               +  E   + VTG  GFIG+ +VK L D   T I   V    D       F      
Sbjct: 38  TGGGSGIEGRMIIVTGGAGFIGSNIVKALNDKGITDI--LVV---DNLKDGTKFVNLVDL 92

Query: 58  DANLRVFEADVLDSGAVSRAVEGCKGVFHVA----SPCTLEDPVDPEKELILPAVQGTLN 113
           +    + + D L            + +FH      +             ++    Q +  
Sbjct: 93  NIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKY------MMDNNYQYSKE 146

Query: 114 VLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEK 173
           +L       +   +  SS +A     G +   F E+   + E   +    +  SK L ++
Sbjct: 147 LLHYCLEREI-PFLYASS-AATY---GGRTSDFIES--REYEKPLNV---FGYSKFLFDE 196

Query: 174 AAWEFAEKHGVDVVAIHPATCLGPLMQP---YLNASCAVLQQLLQGSKDTQEYHWLGA-- 228
              +   +    +V        GP         + +  +  QL  G +  + +       
Sbjct: 197 YVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNG-ESPKLFEGSENFK 255

Query: 229 ---VPVKDVAKAQVLLFESPAASGRY-LCTNGIYQFGDFAERVSKLFPEFPVHRFVFQSP 284
              V V DVA   +   E+   SG + L T     F   A+       +  +    F   
Sbjct: 256 RDFVYVGDVADVNLWFLENG-VSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDK 314

Query: 285 LR 286
           L+
Sbjct: 315 LK 316

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score = 66.5 bits (163), Expect = 8e-13
 Identities = 53/291 (18%), Positives = 91/291 (31%), Gaps = 39/291 (13%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---SSHLFALPGAGDANLRVFEADV 68
           + VTG  GFIG+ +VK L D   T I   V    D       F      +    + + D 
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDI--LVV---DNLKDGTKFVNLVDLNIADYMDKEDF 56

Query: 69  LDSGAVSRAVEGCKGVFHVA----SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           L            + +FH      +             ++    Q +  +L       + 
Sbjct: 57  LIQIMAGEEFGDVEAIFHEGACSSTTEWDGKY------MMDNNYQYSKELLHYCLEREI- 109

Query: 125 RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGV 184
             +  SS +A     G +   F E+   + E   +    Y  SK L ++   +   +   
Sbjct: 110 PFLYASS-AATY---GGRTSDFIES--REYEKPLNV---YGYSKFLFDEYVRQILPEANS 160

Query: 185 DVVAIHPATCLGPLMQP---YLNASCAVLQQLLQGSKDTQEYHWLGA-----VPVKDVAK 236
            +V        GP         + +  +  QL  G +  + +          V V DVA 
Sbjct: 161 QIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNG-ESPKLFEGSENFKRDFVYVGDVAD 219

Query: 237 AQVLLFESPAASGRY-LCTNGIYQFGDFAERVSKLFPEFPVHRFVFQSPLR 286
             +   E+   SG + L T     F   A+       +  +    F   L+
Sbjct: 220 VNLWFLENG-VSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLK 269

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 61.9 bits (151), Expect = 3e-11
 Identities = 21/129 (16%), Positives = 44/129 (34%), Gaps = 16/129 (12%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            + +TGA G +GT +    + N+    +  V    +   +          + V + D  +
Sbjct: 2   NIMLTGATGHLGTHITNQAIANHIDHFHIGV---RNVEKVPDDWRGK---VSVRQLDYFN 55

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
             ++  A +G   V  +                    +    N++ AAK+ GV  ++   
Sbjct: 56  QESMVEAFKGMDTVVFI-PSIIHPSF---------KRIPEVENLVYAAKQSGVAHIIFIG 105

Query: 131 SISAIVPNP 139
             +    NP
Sbjct: 106 YYADQHNNP 114

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 62.2 bits (151), Expect = 3e-11
 Identities = 25/133 (18%), Positives = 45/133 (33%), Gaps = 19/133 (14%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS-HLFALPGAGDANLRVFEADVL 69
           T+ V GA G  G  L++      +             +  L A+P        +F+  +L
Sbjct: 7   TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNV-----TLFQGPLL 61

Query: 70  DSGA-VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
           ++   +    EG    F   +            E+      G  ++ +AAKR G  +  +
Sbjct: 62  NNVPLMDTLFEGAHLAFINTTS-------QAGDEI----AIGK-DLADAAKRAGTIQHYI 109

Query: 129 TSSISAIVPNPGW 141
            SS+        W
Sbjct: 110 YSSMPDHSLYGPW 122

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score = 61.7 bits (150), Expect = 5e-11
 Identities = 47/315 (14%), Positives = 87/315 (27%), Gaps = 56/315 (17%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSIN---------------ATVFPGSDSSH-LFALPGAG 57
           V G +G+ G      L   NY                    ++ P +     +       
Sbjct: 16  VIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT 75

Query: 58  DANLRVFEADVLDSGAVSRAVEGCK--GVFHVAS----PCTLEDPVDPEKELILPAVQGT 111
             ++ ++  D+ D   ++ + +  +   V H       P ++ D            V GT
Sbjct: 76  GKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRA-VYTQHNNVIGT 134

Query: 112 LNVLEAAKRFGVRRVVVTSSISAI-----VPNPGWKGKVFDETSWTDLEYCKSRKKWYPV 166
           LNVL A K FG    +V            +        +        L Y K    +Y +
Sbjct: 135 LNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHL 194

Query: 167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCA----------------VL 210
           SK           +  G+    ++     G                              
Sbjct: 195 SKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFC 254

Query: 211 QQLLQGS------KDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNG---IYQFG 261
            Q   G       K  Q   +L    ++D  +   +   +PA +G +   N     +   
Sbjct: 255 VQAAVGHPLTVYGKGGQTRGYLD---IRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVN 311

Query: 262 DFAERVSKLFPEFPV 276
           + A  V+K   +  +
Sbjct: 312 ELASLVTKAGSKLGL 326

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score = 59.6 bits (145), Expect = 3e-10
 Identities = 50/278 (17%), Positives = 94/278 (33%), Gaps = 62/278 (22%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTS--------INATVFPGSDSSHLFALPGAGDANLR 62
           T+ +TG  GF+G+ L     +N+  +         + T+F  +  S L            
Sbjct: 12  TILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGE 71

Query: 63  VFEADVLDSGAVSRAVE-GCKGVFHVA--SPCTLEDPVDPEKELILPAVQGTLNVLEAAK 119
           V  AD+ +   + R  +     +FH A  S  T+ +     + ++    Q  LN+LE A+
Sbjct: 72  VIAADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQ----ELVMKTNYQAFLNLLEIAR 127

Query: 120 RFGVRRVVVTSSISAI---VPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAW 176
                +V+  SS + +      P               E  ++    Y  SK   ++  +
Sbjct: 128 SKKA-KVIYASS-AGVYGNTKAP------NVV---GKNESPENV---YGFSKLCMDE--F 171

Query: 177 EFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQ---QLLQGS-----KD-TQE----Y 223
             +  +    V +      GP        +  VLQ     +        +   Q     Y
Sbjct: 172 VLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVY 231

Query: 224 HWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFG 261
                  ++DV +A V   ++          +G+Y  G
Sbjct: 232 -------IEDVIQANVKAMKAQK--------SGVYNVG 254

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660

 Score = 58.9 bits (143), Expect = 6e-10
 Identities = 47/229 (20%), Positives = 87/229 (37%), Gaps = 26/229 (11%)

Query: 2   ASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANL 61
            +   +    V + G NGFIG  L + LL  ++  +          S     P     + 
Sbjct: 308 PACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHP-----HF 362

Query: 62  RVFEADV-LDSGAVSRAVEGCKGVFHVASPCT----LEDPVDPEKELILPAVQGTLNVLE 116
              E D+ + S  +   V+ C  V  + +  T      +P+     +     +  L ++ 
Sbjct: 363 HFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLR----VFELDFEENLRIIR 418

Query: 117 AAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAA 175
              ++  R  ++  S S +        K FDE     +    ++ +W Y VSK L ++  
Sbjct: 419 YCVKYRKR--IIFPSTSEVYGMC--SDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474

Query: 176 WEFAEKHGVDVVAIHPATCLGPLM----QPYLNASCAVLQ---QLLQGS 217
           W + EK G+      P   +GP +       + +S A+ Q    L++GS
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGS 523

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 55.8 bits (135), Expect = 3e-09
 Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 19/122 (15%)

Query: 14  VTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG 72
           +TGA G +G +++++L+     + I A V    + +   AL   G   + V +AD  D  
Sbjct: 4   ITGATGQLGHYVIESLMKTVPASQIVAIV---RNPAKAQALAAQG---ITVRQADYGDEA 57

Query: 73  AVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI 132
           A++ A++G + +  ++S     +      +          NV+ AAK  GV+ +  TS +
Sbjct: 58  ALTSALQGVEKLLLISSS----EVGQRAPQ--------HRNVINAAKAAGVKFIAYTSLL 105

Query: 133 SA 134
            A
Sbjct: 106 HA 107

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 55.7 bits (135), Expect = 3e-09
 Identities = 27/125 (21%), Positives = 48/125 (38%), Gaps = 17/125 (13%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTS-INATVFPGSDSSHLFALPGAGDANLRVFEADVL 69
           ++ VTGA G +G  +++ LL     S I A V    +      L   G   + V   D  
Sbjct: 2   SIAVTGATGQLGGLVIQHLLKKVPASQIIAIV---RNVEKASTLADQG---VEVRHGDYN 55

Query: 70  DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
              ++ +A  G   +  ++ P       +         +    NV++AA+  GV+ +  T
Sbjct: 56  QPESLQKAFAGVSKLLFISGP----HYDNTL------LIVQHANVVKAARDAGVKHIAYT 105

Query: 130 SSISA 134
               A
Sbjct: 106 GYAFA 110

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 55.7 bits (134), Expect = 6e-09
 Identities = 53/294 (18%), Positives = 76/294 (25%), Gaps = 54/294 (18%)

Query: 2   ASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATV-------------------F 42
                 E  TV +TGA GF+G +LV  LL      ++  +                   F
Sbjct: 66  LPGPSPELRTVLLTGATGFLGRYLVLELLRR--LDVDGRLICLVRAESDEDARRRLEKTF 123

Query: 43  PGSDSSHLFALPGAGDANLRVFEADV------LDSGAVSRAVEGCKGVFHVASPCTLEDP 96
              D   L          L V   D       LD     R  E    +   A+       
Sbjct: 124 DSGDPELLRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAM------ 177

Query: 97  VD--PEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL 154
           V+  P  EL  P V GT  ++  A    ++     S+   +           D       
Sbjct: 178 VNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTAD-VGAAIEPSAFTEDADIRVIS 236

Query: 155 EYCKSRKKW---YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ----------P 201
                   W   Y  SK   E    E  +   + V        L                
Sbjct: 237 PTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVT 296

Query: 202 YLNASCAVLQQL--LQGSKDTQEYHWLGA---VPVKDVAKAQVLLFESPAASGR 250
            +  S              D++          +PV  VA+A  +L    A S  
Sbjct: 297 RMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSL 350

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 52.9 bits (127), Expect = 3e-08
 Identities = 43/261 (16%), Positives = 67/261 (25%), Gaps = 56/261 (21%)

Query: 11  TVCVTGANGFIGTWLVKTLL-DNNYTSINATV---FPGSDSSHLFALPGAGDANLRVFEA 66
           +V + GA+G  G  L+K +L    ++ +           + ++          N+     
Sbjct: 20  SVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY---------KNVNQEVV 70

Query: 67  DVLDSGAVSRAVEGCKGVFHVASPC---TLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
           D       + A +G    F     C   T           +       L   E AK  G 
Sbjct: 71  DFEKLDDYASAFQGHDVGFC----CLGTTRGKAGAEGFVRV--DRDYVLKSAELAKAGGC 124

Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
           +   + SS  A            D++S             Y   K   E    E      
Sbjct: 125 KHFNLLSSKGA------------DKSSNFL----------YLQVKGEVEAKVEELKFDR- 161

Query: 184 VDVVAIHPATCLGP--LMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLL 241
                  P   L      +P           L              +VPV  V +A +  
Sbjct: 162 --YSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGH------SVPVVTVVRAMLNN 213

Query: 242 FESPAASGRYLCTNG-IYQFG 261
              P      L  N  I+  G
Sbjct: 214 VVRPRDKQMELLENKAIHDLG 234

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357

 Score = 52.2 bits (125), Expect = 6e-08
 Identities = 42/169 (24%), Positives = 59/169 (34%), Gaps = 23/169 (13%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVF-----PGSDSSHLFALPGAGDANLRVFEA 66
           V VTG  GF G WL   L      ++ ATV        +  S  F      D  ++    
Sbjct: 12  VFVTGHTGFKGGWLSLWLQ-----TMGATVKGYSLTAPTVPSL-FETARVAD-GMQSEIG 64

Query: 67  DVLDSGAVSRAVEGCK--GVFH-VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
           D+ D   +  ++   +   VFH  A P       +P  E     V GT+ +LEA +  G 
Sbjct: 65  DIRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEP-VETYSTNVMGTVYLLEAIRHVGG 123

Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAE 172
            + VV  +      N  W    + E               Y  SK  AE
Sbjct: 124 VKAVVNITSDKCYDNKEWI-WGYRENEAMGGYD------PYSNSKGCAE 165

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344

 Score = 51.5 bits (124), Expect = 1e-07
 Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 11/132 (8%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA-GDANLRVFEADVL 69
           T+ +TG  G  G   V+ +LD   T+    +    D      +     D  +R F  DV 
Sbjct: 23  TILITGGTGSFGKCFVRKVLDT--TNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVR 80

Query: 70  DSGAVSRAVEGCKGVFHVAS----PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR 125
           D   ++ A+EG     H A+    P    +P+    E I   + G  NV+ A  +  + +
Sbjct: 81  DLERLNYALEGVDICIHAAALKHVPIAEYNPL----ECIKTNIMGASNVINACLKNAISQ 136

Query: 126 VVVTSSISAIVP 137
           V+  S+  A  P
Sbjct: 137 VIALSTDKAANP 148

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* Length = 337

 Score = 50.6 bits (122), Expect = 2e-07
 Identities = 39/129 (30%), Positives = 52/129 (40%), Gaps = 25/129 (19%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL----------PGAGDANLRV 63
           VTG  GFIG+  V+ LL   Y        P  +   L +L          P   D  LR 
Sbjct: 5   VTGGAGFIGSHFVRQLLAGAYPD-----VPADEVIVLDSLTYAGNRANLAPVDADPRLRF 59

Query: 64  FEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVD-----PEKELILPAVQGTLNVLEAA 118
              D+ D+G ++R + G   + H A+    E  VD              VQGT  +L+ A
Sbjct: 60  VHGDIRDAGLLARELRGVDAIVHFAA----ESHVDRSIAGAS-VFTETNVQGTQTLLQCA 114

Query: 119 KRFGVRRVV 127
              GV RVV
Sbjct: 115 VDAGVGRVV 123

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 50.3 bits (120), Expect = 2e-07
 Identities = 20/131 (15%), Positives = 41/131 (31%), Gaps = 14/131 (10%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS--DSSHLFALPGAGDANLRVFEADV 68
            V + G  G+IG  +V   +   + +      P    +   +  L        ++ EA +
Sbjct: 6   RVLIVGGTGYIGKRIVNASISLGHPTY-VLFRPEVVSNIDKVQMLLYFKQLGAKLIEASL 64

Query: 69  LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
            D   +  A++    V    +   L   +  + +L+           EA K  G  +  +
Sbjct: 65  DDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLV-----------EAIKEAGNIKRFL 113

Query: 129 TSSISAIVPNP 139
            S         
Sbjct: 114 PSEFGMDPDIM 124

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 50.1 bits (120), Expect = 3e-07
 Identities = 23/143 (16%), Positives = 40/143 (27%), Gaps = 19/143 (13%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            + + G  G +G  L + L    +      V  G   S          A ++   ADV  
Sbjct: 5   KILIAGC-GDLGLELARRLTAQGHE-----VT-GLRRS-----AQPMPAGVQTLIADVTR 52

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
              ++  V     +       +               V+G  N L A +   ++ V   S
Sbjct: 53  PDTLASIVHLRPEILVYCVAASEYSDEHYRLSY----VEGLRNTLSALEGAPLQHVFFVS 108

Query: 131 SISAIVPNPGWKGKVFDETSWTD 153
           S            +  DE +   
Sbjct: 109 STGV---YGQEVEEWLDEDTPPI 128

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347

 Score = 49.5 bits (119), Expect = 5e-07
 Identities = 29/127 (22%), Positives = 48/127 (37%), Gaps = 17/127 (13%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSIN--ATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           +TG  GF+G+ L    L      I        G+  + L  L  +   N      D+ + 
Sbjct: 6   ITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDN-LHWL--SSLGNFEFVHGDIRNK 62

Query: 72  GAVSRAVEGCK--GVFHVASPCTLEDPVD-----PEKELILPAVQGTLNVLEAAKRFGVR 124
             V+R +        FH+A     +  +      P        V GTLN+LEA +++   
Sbjct: 63  NDVTRLITKYMPDSCFHLAG----QVAMTTSIDNPC-MDFEINVGGTLNLLEAVRQYNSN 117

Query: 125 RVVVTSS 131
             ++ SS
Sbjct: 118 CNIIYSS 124

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 49.1 bits (117), Expect = 6e-07
 Identities = 38/275 (13%), Positives = 72/275 (26%), Gaps = 62/275 (22%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS---DSSHLFALPGAGDANLRVFEAD 67
            + + GA G+IG  + K  LD  +      V   +   +S     L     +   +    
Sbjct: 6   RILLIGATGYIGRHVAKASLDLGHP-TFLLVRESTASSNSEKAQLLESFKASGANIVHGS 64

Query: 68  VLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV 127
           + D  ++  AV+    V                       ++  +N+++A K  G  +  
Sbjct: 65  IDDHASLVEAVKNVDVVISTVGS---------------LQIESQVNIIKAIKEVGTVKRF 109

Query: 128 VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAA-WEFAEKHGVDV 186
             S     V N                          P       KA      E  G+  
Sbjct: 110 FPSEFGNDVDNVHA---------------------VEPAKSVFEVKAKVRRAIEAEGIPY 148

Query: 187 VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG-------AVPVKDVAKAQV 239
             +            +L +    L Q    +    +   LG        V  +D+    +
Sbjct: 149 TYVSS----NCFAGYFLRS----LAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTI 200

Query: 240 LLFESPAASGR--YLCTNG----IYQFGDFAERVS 268
              + P    +  YL        + +     E+  
Sbjct: 201 KAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKI 235

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 48.7 bits (116), Expect = 7e-07
 Identities = 34/261 (13%), Positives = 65/261 (24%), Gaps = 60/261 (22%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDAN 60
           M     K    + + G  G+IG  +VK  L   +      VF   +SS    L       
Sbjct: 5   MEENGMKS--KILIFGGTGYIGNHMVKGSLKLGH---PTYVFTRPNSSKTTLLDEFQSLG 59

Query: 61  LRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKR 120
             + + ++ +   +   ++    V    +                P +     +LEA K 
Sbjct: 60  AIIVKGELDEHEKLVELMKKVDVVISALAF---------------PQILDQFKILEAIKV 104

Query: 121 FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAA-WEFA 179
            G  +  + S                                  P    +  K       
Sbjct: 105 AGNIKRFLPSDFGVEEDRINALP---------------------PFEALIERKRMIRRAI 143

Query: 180 EKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG-------AVPVK 232
           E+  +    +            ++N        LL+      E    G           +
Sbjct: 144 EEANIPYTYVSA----NCFASYFIN-------YLLRPYDPKDEITVYGTGEAKFAMNYEQ 192

Query: 233 DVAKAQVLLFESPAASGRYLC 253
           D+    + +   P A  R + 
Sbjct: 193 DIGLYTIKVATDPRALNRVVI 213

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 47.7 bits (114), Expect = 1e-06
 Identities = 44/259 (16%), Positives = 77/259 (29%), Gaps = 61/259 (23%)

Query: 11  TVCVTGANGFIGTWLVKTLL-DNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL 69
            V + GA G  G  L+  +L +     + A                A    L      + 
Sbjct: 7   RVLLAGATGLTGEHLLDRILSEPTLAKVIAPARK----------ALAEHPRLDNPVGPLA 56

Query: 70  DSGAVSRAVEGCKGVFHVASPC---TLEDPVDPEKELILPAVQ--GTLNVLEAAKRFGVR 124
           +   + +        F     C   T+++    E      AV     L V + A   G R
Sbjct: 57  EL--LPQLDGSIDTAFC----CLGTTIKEAGSEEA---FRAVDFDLPLAVGKRALEMGAR 107

Query: 125 RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGV 184
             +V S++ A            D  S             Y   K   E+A  E       
Sbjct: 108 HYLVVSALGA------------DAKSSIF----------YNRVKGELEQALQEQGWPQ-- 143

Query: 185 DVVAIHPATCLGPLMQPYLNA--SCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLF 242
            +    P+   GP  + +  A    A + ++L G            +   D+A+A   L 
Sbjct: 144 -LTIARPSLLFGP-REEFRLAEILAAPIARILPGK--------YHGIEACDLARALWRLA 193

Query: 243 ESPAASGRYLCTNGIYQFG 261
                  R++ ++ + + G
Sbjct: 194 LEEGKGVRFVESDELRKLG 212

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 48.1 bits (115), Expect = 1e-06
 Identities = 29/258 (11%), Positives = 65/258 (25%), Gaps = 71/258 (27%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            + V G +G +G  +VK     +                        +A+   F      
Sbjct: 24  NILVLGGSGALGAEVVKFFKSKS-----WNTI-------SIDFRENPNADH-SFTIKDSG 70

Query: 71  SGAVSRAVEGCK-------------GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA 117
              +   +E                G +   +  + ++ +   K +I   +         
Sbjct: 71  EEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNA-SSDEFLKSVKGMIDMNLYSAFASAHI 129

Query: 118 AKRFGVR--RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK----TLA 171
             +   +    V+T + +A+    G                       Y  +K     + 
Sbjct: 130 GAKLLNQGGLFVLTGASAALNRTSGMIA--------------------YGATKAATHHII 169

Query: 172 EKAAWEFAE-KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP 230
           +  A E      G   + I P T   P  +                 K   + ++    P
Sbjct: 170 KDLASENGGLPAGSTSLGILPVTLDTPTNR-----------------KYMSDANFDDWTP 212

Query: 231 VKDVAKAQVLLFESPAAS 248
           + +VA+       +  + 
Sbjct: 213 LSEVAEKLFEWSTNSDSR 230

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* Length = 348

 Score = 47.5 bits (114), Expect = 2e-06
 Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 18/123 (14%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS----SHLFALPGAGDANLRVFEA 66
            + VTG  GFIG+  V  +  NN+  ++ TV    D      +   L       + +   
Sbjct: 6   NIIVTGGAGFIGSNFVHYVY-NNHPDVHVTVL---DKLTYAGNKANLEAILGDRVELVVG 61

Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVD-----PEKELILPAVQGTLNVLEAAKRF 121
           D+ D+  V +       + H A+    E   D     P    I     GT  +LEAA+++
Sbjct: 62  DIADAELVDKLAAKADAIVHYAA----ESHNDNSLNDPS-PFIHTNFIGTYTLLEAARKY 116

Query: 122 GVR 124
            +R
Sbjct: 117 DIR 119

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330

 Score = 45.5 bits (109), Expect = 8e-06
 Identities = 28/139 (20%), Positives = 48/139 (34%), Gaps = 41/139 (29%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---SHLFALPGAGDANLRVFEAD 67
           ++ + G  G+IG+  VK L+D   +     V    D+    H  A+        + +  D
Sbjct: 3   SILICGGAGYIGSHAVKKLVDEGLS---VVVV---DNLQTGHEDAIT----EGAKFYNGD 52

Query: 68  VLDSGAVSR--AVEGCKGVFHVASPCTLEDPVDPEKELIL-------PA------VQGTL 112
           + D   +      E  + V H A+               L       P       V G L
Sbjct: 53  LRDKAFLRDVFTQENIEAVMHFAA-------------DSLVGVSMEKPLQYYNNNVYGAL 99

Query: 113 NVLEAAKRFGVRRVVVTSS 131
            +LE    F V + + +S+
Sbjct: 100 CLLEVMDEFKVDKFIFSST 118

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 45.3 bits (107), Expect = 9e-06
 Identities = 34/254 (13%), Positives = 64/254 (25%), Gaps = 55/254 (21%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS---DSSHLFALPGAGDANLRVFEAD 67
            + + G  G IG  +V   +     +        +     +    +       + + E D
Sbjct: 4   KILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGD 63

Query: 68  VLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV 127
           + D   + +A++    V   A                   ++  + +++A K  G  +  
Sbjct: 64  INDHETLVKAIKQVDIVICAAGR---------------LLIEDQVKIIKAIKEAGNVKKF 108

Query: 128 VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAA-WEFAEKHGVDV 186
             S     V                            PV +   EKA+     E  GV  
Sbjct: 109 FPSEFGLDVDRHDA---------------------VEPVRQVFEEKASIRRVIEAEGVPY 147

Query: 187 VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG-------AVPVKDVAKAQV 239
             +            +L      L QL        +   LG        V   DV    +
Sbjct: 148 TYLCC----HAFTGYFL----RNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTI 199

Query: 240 LLFESPAASGRYLC 253
                P    + + 
Sbjct: 200 RAANDPNTLNKAVH 213

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348

 Score = 44.8 bits (107), Expect = 2e-05
 Identities = 39/146 (26%), Positives = 53/146 (36%), Gaps = 40/146 (27%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSI---NATVFPGSDSSHLFALPG----AGDANLR 62
           E V VTG  G+IG+  V  LL+  Y  +   N         S   +L       G  ++ 
Sbjct: 3   EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTG-RSVE 61

Query: 63  VFEADVLDSGAVSR--AVEGCKGVFHVASPCTLEDPVDPEKELILPAV------------ 108
             E D+LD GA+ R         V H A                L AV            
Sbjct: 62  FEEMDILDQGALQRLFKKYSFMAVIHFAG---------------LKAVGESVQKPLDYYR 106

Query: 109 ---QGTLNVLEAAKRFGVRRVVVTSS 131
               GT+ +LE  K  GV+ +V +SS
Sbjct: 107 VNLTGTIQLLEIMKAHGVKNLVFSSS 132

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 44.3 bits (104), Expect = 2e-05
 Identities = 20/134 (14%), Positives = 42/134 (31%), Gaps = 17/134 (12%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDAN 60
           + S   +    V + GA GFIG ++    LD +  +           S         D  
Sbjct: 6   VPSPKGR----VLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKG 61

Query: 61  LRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKR 120
             +    + +  A+ + ++  +    V S     + +  +  L+           +A K 
Sbjct: 62  AIIVYGLINEQEAMEKILKEHEIDI-VVS-TVGGESILDQIALV-----------KAMKA 108

Query: 121 FGVRRVVVTSSISA 134
            G  +  + S    
Sbjct: 109 VGTIKRFLPSEFGH 122

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 42.7 bits (101), Expect = 6e-05
 Identities = 32/215 (14%), Positives = 55/215 (25%), Gaps = 51/215 (23%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSHLFALPGAGDANLRVFEADVL 69
           +V VTGAN  IG  LV+ L+ +        +   + D      L    D+ + V    V 
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIR---HIIATARDVEKATELKSIKDSRVHVLPLTVT 61

Query: 70  DSGAVSRAVEGCKGVFH------------VASPCTLEDPVDPEK---------------- 101
              ++   V     +              V          +                   
Sbjct: 62  CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLT 121

Query: 102 ELILPAVQ-GTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR 160
           + +LP ++                 V+  SS    + +       F   +          
Sbjct: 122 QKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLA---------- 171

Query: 161 KKWYPVSKT----LAEKAAWEFAEKHGVDVVAIHP 191
              Y +SK          A +  +   V VV   P
Sbjct: 172 ---YRMSKAAINMFGRTLAVDLKDD-NVLVVNFCP 202

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} Length = 336

 Score = 42.9 bits (102), Expect = 7e-05
 Identities = 32/121 (26%), Positives = 45/121 (37%), Gaps = 19/121 (15%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSD----SSHLFALPG-AGDANLRVFEADV 68
           VTG  GFIG+  ++ +L   +           D     S+   L     D      + DV
Sbjct: 8   VTGGMGFIGSNFIRYIL-EKHPDWEVINI---DKLGYGSNPANLKDLEDDPRYTFVKGDV 63

Query: 69  LDSGAVSRAVEGCKGVFHVASPCTLEDPVD-----PEKELILPAVQGTLNVLEAAKRFGV 123
            D   V   V    GV H+A+    E  VD     PE   +   V GT  +LE+ +R   
Sbjct: 64  ADYELVKELVRKVDGVVHLAA----ESHVDRSISSPE-IFLHSNVIGTYTLLESIRRENP 118

Query: 124 R 124
            
Sbjct: 119 E 119

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 25/154 (16%), Positives = 46/154 (29%), Gaps = 46/154 (29%)

Query: 11  TVCVTGANGFIGTWLVKTLL----------DNNYTSINATVFPGSDSSHLFAL------- 53
            V V G  G+IG+  V+ LL          D+   +   +    +  +    L       
Sbjct: 4   RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPK 63

Query: 54  PGAGDANLRVFEADVLDSGAVSRAVE---GCKGVFHVASPCTLEDPVDPEKELIL----- 105
           P   D    +   DV +   ++           V H+ +              +      
Sbjct: 64  PPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCA-------------FLAVGESV 110

Query: 106 --PA------VQGTLNVLEAAKRFGVRRVVVTSS 131
             P       V G L +L+A       +++ +SS
Sbjct: 111 RDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSS 144

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 41.5 bits (97), Expect = 2e-04
 Identities = 23/198 (11%), Positives = 53/198 (26%), Gaps = 43/198 (21%)

Query: 10  ETVCVTGANGFIGTWLVKTLLDNNYTSINATVF--PGSDSSHLFALPGAGDANLRVFEAD 67
           E + + G  G+IG ++V+  L  ++ +        P S  S +          + + E +
Sbjct: 5   EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGE 64

Query: 68  VLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV 127
           + +   +   ++    V                     P +   ++++ A K  G  +  
Sbjct: 65  MEEHEKMVSVLKQVDIVISALPF---------------PMISSQIHIINAIKAAGNIKRF 109

Query: 128 VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAA-WEFAEKHGVDV 186
           + S                              K   P    L +K       E   +  
Sbjct: 110 LPSDFGCEEDRI---------------------KPLPPFESVLEKKRIIRRAIEAAALPY 148

Query: 187 VAIHPATCLGPLMQPYLN 204
             +            ++N
Sbjct: 149 TYVSA----NCFGAYFVN 162

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 3/78 (3%)

Query: 11 TVCVTGANGFIGTWLVKTLLDNNYT--SINATVFPGSDSSHLFALPGAGDANLRVFEADV 68
          ++ +TG N  +G  LVK LL+       +  T      +  L  L     +N+ + E D+
Sbjct: 23 SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNH-SNIHILEIDL 81

Query: 69 LDSGAVSRAVEGCKGVFH 86
           +  A  + V   +GV  
Sbjct: 82 RNFDAYDKLVADIEGVTK 99

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} Length = 346

 Score = 41.3 bits (98), Expect = 2e-04
 Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 35/131 (26%)

Query: 14  VTGANGFIGTWLVKTLLDN--NYTSINATVFPGSDSSHLFALPGAGD-ANLR-------- 62
           VTG  GFIG+  V  +L +   Y  IN             AL  +G+  N++        
Sbjct: 29  VTGGAGFIGSNFVHYMLQSYETYKIIN-----------FDALTYSGNLNNVKSIQDHPNY 77

Query: 63  VFE-ADVLDSGAVSRAVEGCK--GVFHVASPCTLEDPVD-----PEKELILPAVQGTLNV 114
            F   ++ +   +   ++      + + A+    E  VD     P        V GT+ +
Sbjct: 78  YFVKGEIQNGELLEHVIKERDVQVIVNFAA----ESHVDRSIENPI-PFYDTNVIGTVTL 132

Query: 115 LEAAKRFGVRR 125
           LE  K++   +
Sbjct: 133 LELVKKYPHIK 143

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699

 Score = 41.2 bits (97), Expect = 3e-04
 Identities = 31/152 (20%), Positives = 55/152 (36%), Gaps = 40/152 (26%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG----A 56
              ++E   + V VTG  G+IG+  V  L++N Y  +   V     +S   ++       
Sbjct: 3   AQLQSESTSKIVLVTGGAGYIGSHTVVELIENGYDCV---VADNLSNSTYDSVARLEVLT 59

Query: 57  GDANLRVFEADVLDSGAVSR--AVEGCKGVFHVASPCTLEDPVDPEKELILPAV------ 108
              ++  +E D+ D   + +         V H A                L AV      
Sbjct: 60  K-HHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAG---------------LKAVGESTQI 103

Query: 109 ---------QGTLNVLEAAKRFGVRRVVVTSS 131
                     GT+ +LE  +++ V + V +SS
Sbjct: 104 PLRYYHNNILGTVVLLELMQQYNVSKFVFSSS 135

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 40.9 bits (96), Expect = 4e-04
 Identities = 22/97 (22%), Positives = 38/97 (39%), Gaps = 22/97 (22%)

Query: 59  ANLRVFEADVLDSGAVSRAVEGC------KGVFHVASPCTLEDPV----DPE--KELILP 106
           A + +   DV D   +++ +           V H A    L+D V      E   +++ P
Sbjct: 584 AEVSLQACDVADRETLAKVLASIPDEHPLTAVVHAA--GVLDDGVSESLTVERLDQVLRP 641

Query: 107 AVQGTLNVLEAAKR---FGVRRVVVTSSISAIVPNPG 140
            V G  N+LE             V+ SS+S ++ + G
Sbjct: 642 KVDGARNLLELIDPDVAL-----VLFSSVSGVLGSGG 673

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 39.8 bits (94), Expect = 5e-04
 Identities = 35/190 (18%), Positives = 57/190 (30%), Gaps = 36/190 (18%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDSSHLFALPGAGDANLRVFEADVL 69
            V +TGA G +G    + L           +   G  +  L  L  A +   R   AD+ 
Sbjct: 2   RVLITGATGGLGGAFARALKG-------HDLLLSGRRAGALAEL--AREVGARALPADLA 52

Query: 70  DSGAVSRAVEGCKGV--------FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF 121
           D       +E    +            +    E   D  +E++   +     VL+ A+  
Sbjct: 53  DELEAKALLEEAGPLDLLVHAVGKAGRAS-VREAGRDLVEEMLAAHLLTAAFVLKHARFQ 111

Query: 122 GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK 181
              R V   +    V  PG+              Y  +  K     +   E A  E    
Sbjct: 112 KGARAVFFGAYPRYVQVPGFAA------------YAAA--KGA--LEAYLEAARKELLR- 154

Query: 182 HGVDVVAIHP 191
            GV +V +  
Sbjct: 155 EGVHLVLVRL 164

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 39.6 bits (93), Expect = 7e-04
 Identities = 46/275 (16%), Positives = 80/275 (29%), Gaps = 61/275 (22%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYT-SINATVFPGSDSSHLFALPGAGDANLRVFEADVL 69
            + VTG +  IG  +V  L   +    +          + L  L             D+ 
Sbjct: 4   VILVTGVSRGIGKSIVDVLFSLDKDTVVYGV---ARSEAPLKKLKEKYGDRFFYVVGDIT 60

Query: 70  DSGAVSRAVEGCKGVFH----------VASPCTLEDPVDPE--KELILPAVQGTLNVLEA 117
           +   + + V                  V  P    + +D    K+L        ++++  
Sbjct: 61  EDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGI 120

Query: 118 A-----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW--YPVSKTL 170
           A     K  G   VV  SS +  +    W              Y  S  K      + TL
Sbjct: 121 ALPELKKTNG--NVVFVSSDACNMYFSSW------------GAYGSS--KAALNHFAMTL 164

Query: 171 AEKAAWEFAEKHGVDVVAIHPATCLGPL---MQPYLNASC---AVLQQLLQGSKDTQEYH 224
           A        E+  V  +A+ P    G +   MQ  +  +    ++  + L+  +  +E +
Sbjct: 165 A-------NEERQVKAIAVAP----GIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENN 213

Query: 225 WLGAVPVKDVAKAQVLLFESPAAS---GRYLCTNG 256
            L        A     L          G+YL  N 
Sbjct: 214 QLL--DSSVPATVYAKLALHGIPDGVNGQYLSYND 246

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	307
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	100.0
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	100.0
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	100.0
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	100.0
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	100.0
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	100.0
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
4f6c_A	427	AUSA reductase domain protein; thioester reductase	100.0
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	100.0
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	100.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	100.0
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	100.0
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	100.0
4f6l_B	508	AUSA reductase domain protein; thioester reductase	100.0
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	100.0
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	100.0
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	100.0
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	100.0
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	100.0
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	100.0
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	100.0
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.98
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.98
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.98
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.97
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.97
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.97
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.97
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.97
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.97
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.97
1spx_A	278	Short-chain reductase family member (5L265); paral	99.97
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.97
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.97
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.97
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.96
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.96
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.96
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.96
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.96
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.96
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.96
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.96
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.96
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.96
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.96
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.96
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.96
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.96
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.96
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.96
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.96
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.96
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.96
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.96
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.96
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.96
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.96
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.96
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.96
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.96
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.96
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.96
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.96
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.96
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.96
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.96
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.96
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.96
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.96
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.96
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.96
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.96
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.95
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.95
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.95
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.95
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.95
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.95
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.95
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.95
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.95
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.95
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.95
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.95
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.95
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.95
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.95
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.95
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.95
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.95
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.95
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.95
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.95
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.95
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.95
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.95
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.95
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.95
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.95
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.95
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.95
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.95
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.95
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.95
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.95
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.95
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.95
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.95
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.95
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.95
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.95
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.95
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.95
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.95
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.95
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.95
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.95
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.95
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.95
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.95
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.95
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.95
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.95
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.95
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.95
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.95
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.95
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.95
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.95
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.95
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.95
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.95
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.95
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.95
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.95
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.95
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.95
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.95
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.95
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.95
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.95
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.95
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.95
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.95
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.95
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.95
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.95
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.95
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.95
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.95
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.95
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.95
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.95
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.95
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.95
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.95
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.95
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.95
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.95
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.95
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.95
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.95
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.95
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.95
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.95
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.95
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.95
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.95
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.94
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.94
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.94
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.94
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.94
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.94
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.94
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.94
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.94
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.94
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.94
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.94
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.94
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.94
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.94
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.94
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.94
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.94
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.94
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.94
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.94
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.94
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.94
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.94
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.94
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.94
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.94
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.94
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.94
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.94
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.94
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.94
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.94
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.94
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.94
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.94
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.94
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.94
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.94
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.94
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.94
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.94
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.94
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.94
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.94
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.94
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.94
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.94
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.94
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.94
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.94
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.93
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.93
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.93
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.93
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.93
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.93
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.93
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.93
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.93
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.93
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.93
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.93
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.93
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.93
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.93
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.92
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.92
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.92
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.92
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.92
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.91
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.91
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.91
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.9
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.9
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.89
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.89
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.88
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.87
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.87
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.86
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.86
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.85
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.84
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.81
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.81
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.8
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.79
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.78
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.77
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.75
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.75
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.73
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.73
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.57
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.54
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.38
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.26
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	99.13
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	99.08
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.07
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.99
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.99
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.96
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.92
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.88
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.77
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.74
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.73
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.7
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.69
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.61
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.56
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.51
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.51
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.44
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.38
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.37
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.36
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.3
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	98.14
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.14
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	98.13
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.13
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.1
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.06
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	98.04
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	98.03
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.01
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	98.0
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.99
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.97
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.95
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.92
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.91
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.9
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.89
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.87
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.85
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.82
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.81
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.79
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.71
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.69
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.67
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.66
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.66
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.66
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.65
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.64
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.64
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.61
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.59
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.59
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.57
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.57
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.57
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.57
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.56
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.56
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.55
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.54
1lnq_A	336	MTHK channels, potassium channel related protein;	97.54
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.54
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.53
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.51
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.49
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	97.49
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.48
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.45
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.45
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.45
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.44
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.43
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.43
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.42
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	97.42
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.41
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.4
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.39
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.39
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.36
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.35
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	97.35
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.35
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.35
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.34
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.33
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.33
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.3
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.26
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.23
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	97.21
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.21
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.21
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.21
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	97.19
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	97.18
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	97.18
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.17
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.17
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.17
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	97.16
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.16
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.15
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	97.14
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	97.14
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.13
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	97.11
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.1
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.1
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.09
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.09
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.08
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	97.08
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.07
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.07
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.06
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	97.05
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	97.05
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.04
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.02
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	97.02
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.01
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	97.0
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.0
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	97.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	96.99
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	96.98
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.98
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	96.98
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.97
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	96.97
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.95
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	96.95
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.95
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.94
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.92
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.91
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	96.91
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.9
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.9
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	96.89
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.88
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	96.88
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	96.88
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.86
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.85
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	96.85
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	96.83
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.83
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	96.81
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	96.8
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.8
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.8
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	96.79
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.78
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.78
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	96.78
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.77
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	96.76
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	96.76
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.75
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.72
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.72
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	96.7
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.69
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.68
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	96.67
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.67
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	96.66
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	96.65
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.65
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.65
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	96.65
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.64
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.63
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	96.62
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	96.61
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.6
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	96.6

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=9.2e-40  Score=287.08  Aligned_cols=259  Identities=17%  Similarity=0.195  Sum_probs=204.1

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCC--CCeEEEEeCCCCC--CcccccCCCCCCCceEEEEcccCChhHHHHHhc
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGSD--SSHLFALPGAGDANLRVFEADVLDSGAVSRAVE   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g--~~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~   79 (307)
                      |++.+||+|+|||||||||++|+++|+++|  + +|++.+|....  ...+..+..  ..++.++.+|++|++++.++++
T Consensus        19 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~-~v~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~d~~~~~~~~~   95 (346)
T 4egb_A           19 YFQSNAMNILVTGGAGFIGSNFVHYMLQSYETY-KIINFDALTYSGNLNNVKSIQD--HPNYYFVKGEIQNGELLEHVIK   95 (346)
T ss_dssp             -----CEEEEEETTTSHHHHHHHHHHHHHCTTE-EEEEEECCCTTCCGGGGTTTTT--CTTEEEEECCTTCHHHHHHHHH
T ss_pred             ccccCCCeEEEECCccHHHHHHHHHHHhhCCCc-EEEEEeccccccchhhhhhhcc--CCCeEEEEcCCCCHHHHHHHHh
Confidence            344568899999999999999999999999  5 78888875422  222222211  1279999999999999999998


Q ss_pred             C--ccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhh
Q 021819           80 G--CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC  157 (307)
Q Consensus        80 ~--~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~  157 (307)
                      +  +|+|||+|+..........+...+++|+.++.+++++|++.++++|||+||.+ +|+... ...+++|+++..|.  
T Consensus        96 ~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~-vy~~~~-~~~~~~E~~~~~p~--  171 (346)
T 4egb_A           96 ERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDE-VYGSLG-KTGRFTEETPLAPN--  171 (346)
T ss_dssp             HHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGG-GGCCCC-SSCCBCTTSCCCCC--
T ss_pred             hcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchH-HhCCCC-cCCCcCCCCCCCCC--
Confidence            7  99999999987655455667889999999999999999999999999999965 455432 13688999877664  


Q ss_pred             cccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC---CCcccCcccHHHH
Q 021819          158 KSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDV  234 (307)
Q Consensus       158 ~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~dv  234 (307)
                          +.|+.+|.++|.+++.++++++++++++||+.||||..... ..+..++.....+.+...   +...++++|++|+
T Consensus       172 ----~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  246 (346)
T 4egb_A          172 ----SPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPE-KLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDH  246 (346)
T ss_dssp             ----SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHH
T ss_pred             ----ChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCcc-chHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHH
Confidence                68999999999999999988899999999999999987544 556677788888876554   3478899999999


Q ss_pred             HHHHHHhhcCCCCCceEEecC-CcccHHHHHHHHHHhCCCCC
Q 021819          235 AKAQVLLFESPAASGRYLCTN-GIYQFGDFAERVSKLFPEFP  275 (307)
Q Consensus       235 a~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~  275 (307)
                      |++++.+++++..++.|++++ +.+++.|+++.+.+.+ +.+
T Consensus       247 a~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~-g~~  287 (346)
T 4egb_A          247 CSAIDVVLHKGRVGEVYNIGGNNEKTNVEVVEQIITLL-GKT  287 (346)
T ss_dssp             HHHHHHHHHHCCTTCEEEECCSCCEEHHHHHHHHHHHH-TCC
T ss_pred             HHHHHHHHhcCCCCCEEEECCCCceeHHHHHHHHHHHh-CCC
Confidence            999999999887656888765 5699999999999999 443

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=1e-38  Score=276.36  Aligned_cols=241  Identities=16%  Similarity=0.162  Sum_probs=202.5

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      ||+|+|||||||||++|++.|+++|+ +|++++|++.... +.        +++++.+|++ .+++.++++++|+|||+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-~~--------~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a   70 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRSIGNKA-IN--------DYEYRVSDYT-LEDLINQLNDVDAVVHLA   70 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCC--------------CCEEEECCCC-HHHHHHHTTTCSEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCCCccc-CC--------ceEEEEcccc-HHHHHHhhcCCCEEEEcc
Confidence            46999999999999999999999999 9999999843332 21        6789999999 999999999999999999


Q ss_pred             cCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHH
Q 021819           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (307)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (307)
                      +.....    .+...+++|+.++.+++++|++.++++|||+||.+ +|+...  ..+++|+++..|.      +.|+.+|
T Consensus        71 ~~~~~~----~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~-vyg~~~--~~~~~E~~~~~p~------~~Y~~sK  137 (311)
T 3m2p_A           71 ATRGSQ----GKISEFHDNEILTQNLYDACYENNISNIVYASTIS-AYSDET--SLPWNEKELPLPD------LMYGVSK  137 (311)
T ss_dssp             CCCCSS----SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGG-GCCCGG--GCSBCTTSCCCCS------SHHHHHH
T ss_pred             ccCCCC----ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHH-HhCCCC--CCCCCCCCCCCCC------chhHHHH
Confidence            986553    56788999999999999999999999999999955 455433  2678898876664      7899999


Q ss_pred             HHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC---CCcccCcccHHHHHHHHHHhhcCC
Q 021819          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQVLLFESP  245 (307)
Q Consensus       169 ~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~dva~~~~~~~~~~  245 (307)
                      .++|.+++.++++.+++++++||+.|||+..... ..+..++.....+.+..+   ++..++++|++|+|++++.+++++
T Consensus       138 ~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~  216 (311)
T 3m2p_A          138 LACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNN-YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQE  216 (311)
T ss_dssp             HHHHHHHHHHHHHSCCEEEEEEECEEECSCC--C-CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCT
T ss_pred             HHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCC-CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcC
Confidence            9999999999988999999999999999987654 456777788887777654   457889999999999999999988


Q ss_pred             CCCceEEec-CCcccHHHHHHHHHHhCCCCC
Q 021819          246 AASGRYLCT-NGIYQFGDFAERVSKLFPEFP  275 (307)
Q Consensus       246 ~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~  275 (307)
                      ...+.|+++ ++.+++.|+++.+.+.+ +.+
T Consensus       217 ~~~~~~~i~~~~~~s~~e~~~~i~~~~-g~~  246 (311)
T 3m2p_A          217 KVSGTFNIGSGDALTNYEVANTINNAF-GNK  246 (311)
T ss_dssp             TCCEEEEECCSCEECHHHHHHHHHHHT-TCT
T ss_pred             CCCCeEEeCCCCcccHHHHHHHHHHHh-CCC
Confidence            766678775 57799999999999999 443

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=2.9e-39  Score=284.49  Aligned_cols=257  Identities=17%  Similarity=0.137  Sum_probs=206.9

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcc-cccCCCCC----CCceEEEEcccCChhHHHHHhcCc
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH-LFALPGAG----DANLRVFEADVLDSGAVSRAVEGC   81 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-~~~~~~~~----~~~~~~i~~D~~d~~~~~~~~~~~   81 (307)
                      .++|+|||||||||||++|++.|+++|+ +|++++|+...... +..+....    ..+++++.+|++|++++.++++++
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~  101 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV  101 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence            3468999999999999999999999999 99999997654322 11110000    017899999999999999999999


Q ss_pred             cEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccC
Q 021819           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK  161 (307)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  161 (307)
                      |+|||+|+.........++...+++|+.++.+++++|++.++++|||+||.+ +|+...  ..+++|+++..|.      
T Consensus       102 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~-vyg~~~--~~~~~E~~~~~p~------  172 (351)
T 3ruf_A          102 DHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSS-TYGDHP--ALPKVEENIGNPL------  172 (351)
T ss_dssp             SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGG-GGTTCC--CSSBCTTCCCCCC------
T ss_pred             CEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHH-hcCCCC--CCCCccCCCCCCC------
Confidence            9999999975432223345678999999999999999999999999999965 454433  3688999876664      


Q ss_pred             ccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC---CcchHHHHHHHHcCCCCCC---CCcccCcccHHHHH
Q 021819          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVA  235 (307)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~dva  235 (307)
                      +.|+.+|.++|.+++.++++.+++++++||++||||.....   ...+..++.....+.+..+   +.+.++++|++|+|
T Consensus       173 ~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva  252 (351)
T 3ruf_A          173 SPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVI  252 (351)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHH
Confidence            68999999999999999888899999999999999987543   2456677777888877654   34789999999999


Q ss_pred             HHHHHhhcCC-C-CCceEEec-CCcccHHHHHHHHHHhCCC
Q 021819          236 KAQVLLFESP-A-ASGRYLCT-NGIYQFGDFAERVSKLFPE  273 (307)
Q Consensus       236 ~~~~~~~~~~-~-~~g~~~~~-~~~~~~~~~~~~~~~~~~~  273 (307)
                      ++++.+++.+ . .++.|+++ ++.+++.|+++.+.+.++.
T Consensus       253 ~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~  293 (351)
T 3ruf_A          253 QMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNL  293 (351)
T ss_dssp             HHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHT
T ss_pred             HHHHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCc
Confidence            9999999873 3 34578775 5789999999999999843

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-38  Score=275.49  Aligned_cols=247  Identities=17%  Similarity=0.194  Sum_probs=198.4

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      ||+|||||||||||++|+++|+++|. .|.+..|+.........       ++.++.+|++| +++.++++++|+|||+|
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~-~v~~~~~~~~~~~~~~~-------~~~~~~~Dl~~-~~~~~~~~~~d~vih~a   71 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESNE-IVVIDNLSSGNEEFVNE-------AARLVKADLAA-DDIKDYLKGAEEVWHIA   71 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTSC-EEEECCCSSCCGGGSCT-------TEEEECCCTTT-SCCHHHHTTCSEEEECC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEcCCCCChhhcCC-------CcEEEECcCCh-HHHHHHhcCCCEEEECC
Confidence            46899999999999999999999995 56554444333322211       78999999999 88999999999999999


Q ss_pred             cCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHH
Q 021819           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (307)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (307)
                      +........+++...+++|+.++.+++++|++.++++|||+||.+ +|+...  ..+++|+++..+.      +.|+.+|
T Consensus        72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~-vyg~~~--~~~~~E~~~~~~~------~~Y~~sK  142 (313)
T 3ehe_A           72 ANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTST-VYGEAK--VIPTPEDYPTHPI------SLYGASK  142 (313)
T ss_dssp             CCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGG-GGCSCS--SSSBCTTSCCCCC------SHHHHHH
T ss_pred             CCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchH-HhCcCC--CCCCCCCCCCCCC------CHHHHHH
Confidence            976555556678899999999999999999999999999999965 455433  3678888766554      6899999


Q ss_pred             HHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCC-CC-CC--CCcccCcccHHHHHHHHHHhhcC
Q 021819          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS-KD-TQ--EYHWLGAVPVKDVAKAQVLLFES  244 (307)
Q Consensus       169 ~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~-~~--~~~~~~~i~~~dva~~~~~~~~~  244 (307)
                      ..+|.+++.++++++++++++||+.||||....  ..+..++.....+. +. ..  +.+.++|+|++|+|++++.+++.
T Consensus       143 ~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~  220 (313)
T 3ehe_A          143 LACEALIESYCHTFDMQAWIYRFANVIGRRSTH--GVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRG  220 (313)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEEECSCEESTTCCC--SHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhcCCCEEEEeeccccCcCCCc--ChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhcc
Confidence            999999999998899999999999999998654  35566677766663 32 22  44789999999999999999995


Q ss_pred             CCCCceEEec-CCcccHHHHHHHHHHhCCCCCC
Q 021819          245 PAASGRYLCT-NGIYQFGDFAERVSKLFPEFPV  276 (307)
Q Consensus       245 ~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~  276 (307)
                      ....+.|+++ ++.+++.|+++.+.+.+ +.+.
T Consensus       221 ~~~~~~~ni~~~~~~s~~e~~~~i~~~~-g~~~  252 (313)
T 3ehe_A          221 DERVNIFNIGSEDQIKVKRIAEIVCEEL-GLSP  252 (313)
T ss_dssp             CSSEEEEECCCSCCEEHHHHHHHHHHHT-TCCC
T ss_pred             CCCCceEEECCCCCeeHHHHHHHHHHHh-CCCC
Confidence            5555678876 46899999999999999 5443

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=4.4e-38  Score=275.87  Aligned_cols=253  Identities=21%  Similarity=0.217  Sum_probs=195.0

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      .+|+|+|||||||||++|+++|+++|+ +|++++|++...+.+...      +++++.+|++|++++.++++++|+|||+
T Consensus        12 ~~M~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~------~~~~~~~Dl~d~~~~~~~~~~~d~vih~   84 (342)
T 2x4g_A           12 AHVKYAVLGATGLLGHHAARAIRAAGH-DLVLIHRPSSQIQRLAYL------EPECRVAEMLDHAGLERALRGLDGVIFS   84 (342)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECTTSCGGGGGGG------CCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecChHhhhhhccC------CeEEEEecCCCHHHHHHHHcCCCEEEEC
Confidence            346999999999999999999999999 999999987655433321      6789999999999999999999999999


Q ss_pred             ccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHH
Q 021819           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (307)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (307)
                      |+....  ...+..+.+++|+.++.+++++|.+.++++|||+||.+++..... ...+ +|+++..|...  ..+.|+.+
T Consensus        85 a~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~-~~~~-~E~~~~~p~~~--~~~~Y~~s  158 (342)
T 2x4g_A           85 AGYYPS--RPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQ-GLPG-HEGLFYDSLPS--GKSSYVLC  158 (342)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTT-SSCB-CTTCCCSSCCT--TSCHHHHH
T ss_pred             CccCcC--CCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCC-CCCC-CCCCCCCcccc--ccChHHHH
Confidence            997542  234567899999999999999999999999999999765433222 1134 88887665110  12689999


Q ss_pred             HHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCCCC
Q 021819          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAA  247 (307)
Q Consensus       168 K~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~~  247 (307)
                      |..+|.+++.++++ +++++++||+.+||+..... . +..++.....+....++++.+++++++|+|++++.+++++..
T Consensus       159 K~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~  235 (342)
T 2x4g_A          159 KWALDEQAREQARN-GLPVVIGIPGMVLGELDIGP-T-TGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGRI  235 (342)
T ss_dssp             HHHHHHHHHHHHHT-TCCEEEEEECEEECSCCSSC-S-TTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHHhhc-CCcEEEEeCCceECCCCccc-c-HHHHHHHHHcCCCccccCCCcceeeHHHHHHHHHHHHhCCCC
Confidence            99999999998877 99999999999999976211 2 345666666666544466788999999999999999987766


Q ss_pred             CceEEecCCcccHHHHHHHHHHhCCCCCCC
Q 021819          248 SGRYLCTNGIYQFGDFAERVSKLFPEFPVH  277 (307)
Q Consensus       248 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (307)
                      ++.|+++++.+++.|+++.+.+.+ +.+.+
T Consensus       236 g~~~~v~~~~~s~~e~~~~i~~~~-g~~~~  264 (342)
T 2x4g_A          236 GERYLLTGHNLEMADLTRRIAELL-GQPAP  264 (342)
T ss_dssp             TCEEEECCEEEEHHHHHHHHHHHH-TCCCC
T ss_pred             CceEEEcCCcccHHHHHHHHHHHh-CCCCC
Confidence            557887754499999999999999 55544

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=5e-39  Score=285.12  Aligned_cols=255  Identities=18%  Similarity=0.284  Sum_probs=204.0

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHC-CCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccC-ChhHHHHHhcCccE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL-DSGAVSRAVEGCKG   83 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~-d~~~~~~~~~~~d~   83 (307)
                      ..+||+|+|||||||||++|+++|+++ |+ +|++++|+......+...     .+++++.+|++ |.+++.++++++|+
T Consensus        21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~-----~~v~~~~~Dl~~d~~~~~~~~~~~d~   94 (372)
T 3slg_A           21 SMKAKKVLILGVNGFIGHHLSKRILETTDW-EVFGMDMQTDRLGDLVKH-----ERMHFFEGDITINKEWVEYHVKKCDV   94 (372)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHHSSC-EEEEEESCCTTTGGGGGS-----TTEEEEECCTTTCHHHHHHHHHHCSE
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCC-EEEEEeCChhhhhhhccC-----CCeEEEeCccCCCHHHHHHHhccCCE
Confidence            345789999999999999999999998 88 999999987665544321     17999999999 99999999999999


Q ss_pred             EEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhc-ccCc
Q 021819           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK-SRKK  162 (307)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~-~~~~  162 (307)
                      |||+|+.........++.+.+++|+.++.+++++|++.+ ++|||+||.+ +|+...  ..+++|++++.+..+. .+.+
T Consensus        95 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~-vyg~~~--~~~~~e~~~~~~~~p~~~p~~  170 (372)
T 3slg_A           95 ILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSE-VYGMCA--DEQFDPDASALTYGPINKPRW  170 (372)
T ss_dssp             EEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGG-GGBSCC--CSSBCTTTCCEEECCTTCTTH
T ss_pred             EEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHH-HhCCCC--CCCCCccccccccCCCCCCCC
Confidence            999999765422223456788999999999999999999 9999999954 565543  2567777754211101 1235


Q ss_pred             cHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCC-------CCcchHHHHHHHHcCCCCCC---CCcccCcccHH
Q 021819          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP-------YLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVK  232 (307)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~-------~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~  232 (307)
                      .|+.+|.++|.+++.++++ +++++++||+.||||...+       ....+..++.....+.+..+   +++.++++|++
T Consensus       171 ~Y~~sK~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~  249 (372)
T 3slg_A          171 IYACSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVD  249 (372)
T ss_dssp             HHHHHHHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHH
T ss_pred             cHHHHHHHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHH
Confidence            7999999999999988877 9999999999999998754       12356677778888876554   35788999999


Q ss_pred             HHHHHHHHhhcCCC---CCceEEecC--CcccHHHHHHHHHHhC
Q 021819          233 DVAKAQVLLFESPA---ASGRYLCTN--GIYQFGDFAERVSKLF  271 (307)
Q Consensus       233 dva~~~~~~~~~~~---~~g~~~~~~--~~~~~~~~~~~~~~~~  271 (307)
                      |+|++++.+++++.   .++.|++++  +.+++.|+++.+.+.+
T Consensus       250 Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~  293 (372)
T 3slg_A          250 DGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELA  293 (372)
T ss_dssp             HHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHh
Confidence            99999999999874   345788776  4899999999999988

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=100.00  E-value=4.1e-38  Score=273.83  Aligned_cols=265  Identities=37%  Similarity=0.605  Sum_probs=192.8

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeC-CCCC---CcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSD---SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r-~~~~---~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~v   84 (307)
                      +|+|||||||||||++|++.|+++|+ +|++++| ++..   ...+..+... ..++.++.+|++|++++.++++++|+|
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~v   78 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGY-SVNTTIRADPERKRDVSFLTNLPGA-SEKLHFFNADLSNPDSFAAAIEGCVGI   78 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCCC----CCCHHHHTSTTH-HHHEEECCCCTTCGGGGHHHHTTCSEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCC-EEEEEEeCCccchhHHHHHHhhhcc-CCceEEEecCCCCHHHHHHHHcCCCEE
Confidence            46899999999999999999999999 9999888 5422   1111111100 015788899999999999999999999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhc-CCcEEEEecCcceeccCCCCCCcccccCCCCchhhhc--ccC
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK--SRK  161 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~--~~~  161 (307)
                      ||+|+.... ...+...+.+++|+.|+.+++++|.+. ++++|||+||.+++++.... ..+++|+++....+..  .+.
T Consensus        79 ih~A~~~~~-~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~p~  156 (322)
T 2p4h_X           79 FHTASPIDF-AVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKD-KDVLDESDWSDVDLLRSVKPF  156 (322)
T ss_dssp             EECCCCC---------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSC-CSEECTTCCCCHHHHHHHCCT
T ss_pred             EEcCCcccC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCC-CeecCCccccchhhhcccCcc
Confidence            999975321 111223458999999999999999988 78999999998766554332 3578888765543311  112


Q ss_pred             c-cHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHH
Q 021819          162 K-WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVL  240 (307)
Q Consensus       162 ~-~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~  240 (307)
                      . .|+.+|.++|.+++.+++.++++++++||++||||............+.....+....++....+++|++|+|+++++
T Consensus       157 ~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~~~  236 (322)
T 2p4h_X          157 GWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIY  236 (322)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHHHHHHHHH
Confidence            2 599999999999998887789999999999999997654322111122222344433333333489999999999999


Q ss_pred             hhcCCCCCceEEecCCcccHHHHHHHHHHhCCCCCCC
Q 021819          241 LFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVH  277 (307)
Q Consensus       241 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (307)
                      +++.+...|.|+++++.+++.|+++.+.+.+|..++|
T Consensus       237 ~~~~~~~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~  273 (322)
T 2p4h_X          237 LLENSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQIL  273 (322)
T ss_dssp             HHHSCCCCEEEECCCEEEEHHHHHHHHHHHCTTSCCC
T ss_pred             HhhCcCCCCCEEEcCCCCCHHHHHHHHHHhCCCCCCC
Confidence            9987666678998788899999999999988654444

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=2.5e-38  Score=278.07  Aligned_cols=250  Identities=20%  Similarity=0.218  Sum_probs=201.0

Q ss_pred             cccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEE
Q 021819            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (307)
Q Consensus         5 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~v   84 (307)
                      .++++|+|||||||||||++|++.|+++|+ +|++++|++...            ++.++.+|++|.+++.++++++|+|
T Consensus        15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~------------~~~~~~~Dl~d~~~~~~~~~~~d~v   81 (347)
T 4id9_A           15 VPRGSHMILVTGSAGRVGRAVVAALRTQGR-TVRGFDLRPSGT------------GGEEVVGSLEDGQALSDAIMGVSAV   81 (347)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTC-CEEEEESSCCSS------------CCSEEESCTTCHHHHHHHHTTCSEE
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCCCCCC------------CccEEecCcCCHHHHHHHHhCCCEE
Confidence            345678999999999999999999999999 999999976540            6789999999999999999999999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccH
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (307)
                      ||+|+.....  ...+...+++|+.++.+++++|++.++++|||+||.+ +|+.......+++|+++..+.      +.|
T Consensus        82 ih~A~~~~~~--~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~-vyg~~~~~~~~~~E~~~~~~~------~~Y  152 (347)
T 4id9_A           82 LHLGAFMSWA--PADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGE-VYPENRPEFLPVTEDHPLCPN------SPY  152 (347)
T ss_dssp             EECCCCCCSS--GGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGG-GTTTTSCSSSSBCTTSCCCCC------SHH
T ss_pred             EECCcccCcc--hhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHH-HhCCCCCCCCCcCCCCCCCCC------ChH
Confidence            9999976542  2334789999999999999999999999999999965 555422224678898876654      789


Q ss_pred             HHHHHHHHHHHHHHHHhcCCcEEEEecCcee-------------CCCCCCC----------CcchHHHHHHHHcCCCCCC
Q 021819          165 PVSKTLAEKAAWEFAEKHGVDVVAIHPATCL-------------GPLMQPY----------LNASCAVLQQLLQGSKDTQ  221 (307)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~-------------g~~~~~~----------~~~~~~~~~~~~~~~~~~~  221 (307)
                      +.+|.++|.+++.++++.+++++++||+.||             ||.....          ...+..++.....+.+...
T Consensus       153 ~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (347)
T 4id9_A          153 GLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHI  232 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEE
T ss_pred             HHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEE
Confidence            9999999999999998899999999999999             7654321          2345566666667766443


Q ss_pred             ---CCcccCc----ccHHHHHHHHHHhhcCCC-CCceEEec-CCcccHHHHHHHHHHhCCCCCCC
Q 021819          222 ---EYHWLGA----VPVKDVAKAQVLLFESPA-ASGRYLCT-NGIYQFGDFAERVSKLFPEFPVH  277 (307)
Q Consensus       222 ---~~~~~~~----i~~~dva~~~~~~~~~~~-~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  277 (307)
                         +...+++    +|++|+|++++.+++++. .++.|+++ ++.+++.|+++.+.+.+ +.+.+
T Consensus       233 ~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~-g~~~~  296 (347)
T 4id9_A          233 LARNENGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALT-GLPIV  296 (347)
T ss_dssp             EEECTTCCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHH-CCCEE
T ss_pred             eCCCCcccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHh-CCCCc
Confidence               3467888    999999999999999884 44578876 56799999999999999 55444

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=3.3e-38  Score=278.33  Aligned_cols=258  Identities=19%  Similarity=0.170  Sum_probs=201.8

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcC--ccEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGV   84 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~--~d~v   84 (307)
                      +++|+|+|||||||||++|+++|+++|+ +|++++|+......+....... .++.++.+|++|++++.+++++  +|+|
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   84 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVA-DGMQSEIGDIRDQNKLLESIREFQPEIV   84 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTT-TTSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEeCCCcccchhhHhhccC-CceEEEEccccCHHHHHHHHHhcCCCEE
Confidence            4568999999999999999999999999 9999999765543332211111 1788999999999999999886  8999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcC-CcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCcc
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (307)
                      ||+||..........+...+++|+.++.+++++|.+.+ +++|||+||..+ |+.... ..+++|+++..+.      +.
T Consensus        85 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v-yg~~~~-~~~~~E~~~~~~~------~~  156 (357)
T 1rkx_A           85 FHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKC-YDNKEW-IWGYRENEAMGGY------DP  156 (357)
T ss_dssp             EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGG-BCCCCS-SSCBCTTSCBCCS------SH
T ss_pred             EECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHH-hCCCCc-CCCCCCCCCCCCC------Cc
Confidence            99999643211123456889999999999999999886 789999999664 543321 2467777665443      68


Q ss_pred             HHHHHHHHHHHHHHHHHhc---------CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC--CCcccCcccHH
Q 021819          164 YPVSKTLAEKAAWEFAEKH---------GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ--EYHWLGAVPVK  232 (307)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~---------~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~  232 (307)
                      |+.+|.++|.+++.+++++         +++++++||+.||||........+..++.....+.+..+  +.+.++|+|++
T Consensus       157 Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~  236 (357)
T 1rkx_A          157 YSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVL  236 (357)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETH
T ss_pred             cHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEeHH
Confidence            9999999999999887754         999999999999999865444566777777777776554  34788999999


Q ss_pred             HHHHHHHHhhcC----C-CCCceEEecC---CcccHHHHHHHHHHhCCCCC
Q 021819          233 DVAKAQVLLFES----P-AASGRYLCTN---GIYQFGDFAERVSKLFPEFP  275 (307)
Q Consensus       233 dva~~~~~~~~~----~-~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~  275 (307)
                      |+|++++.+++.    + ...+.|++++   +.+++.|+++.+.+.+ +.+
T Consensus       237 Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~-g~~  286 (357)
T 1rkx_A          237 EPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYW-GEG  286 (357)
T ss_dssp             HHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHH-CTT
T ss_pred             HHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHh-CCC
Confidence            999999998874    2 3446798874   4699999999999998 443

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=100.00  E-value=8.8e-38  Score=273.51  Aligned_cols=266  Identities=36%  Similarity=0.684  Sum_probs=195.4

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc---cCCCCCCCceEEEEcccCChhHHHHHhcCccEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF---ALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~v   84 (307)
                      ++|+||||||+||||++|+++|+++|+ +|++++|+........   .+... ..+++++.+|++|++++.++++++|+|
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~V   81 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGY-TVRATVRDPTNVKKVKHLLDLPKA-ETHLTLWKADLADEGSFDEAIKGCTGV   81 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCTTCHHHHHHHHTSTTH-HHHEEEEECCTTSTTTTHHHHTTCSEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCC-EEEEEECCcchhHHHHHHHhcccC-CCeEEEEEcCCCCHHHHHHHHcCCCEE
Confidence            467999999999999999999999999 9999998765322111   11110 015889999999999999999999999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcC-CcEEEEecCcceeccCCCCCCcccccCCCCchhhh--c-cc
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC--K-SR  160 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~--~-~~  160 (307)
                      ||+|+.... ...++..+.+++|+.++.+++++|.+.+ +++|||+||.+++++.... ..+++|+++....+.  . .+
T Consensus        82 ih~A~~~~~-~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~-~~~~~E~~~~~~~~~~~~~~~  159 (337)
T 2c29_D           82 FHVATPMDF-ESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQ-LPVYDESCWSDMEFCRAKKMT  159 (337)
T ss_dssp             EECCCCCCS-SCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSC-CSEECTTCCCCHHHHHHHCCT
T ss_pred             EEeccccCC-CCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCC-CcccCcccCCchhhhcccCCc
Confidence            999986532 1123344689999999999999999887 8999999998766654332 356788876544321  1 12


Q ss_pred             CccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCC-cccCcccHHHHHHHHH
Q 021819          161 KKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY-HWLGAVPVKDVAKAQV  239 (307)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~dva~~~~  239 (307)
                      ...|+.+|.++|.+++.+++.++++++++||++||||..................+....... ....|+|++|+|++++
T Consensus       160 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~Dva~a~~  239 (337)
T 2c29_D          160 AWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHI  239 (337)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEHHHHHHHHH
Confidence            346999999999999988877899999999999999986543111111110112333221111 2344999999999999


Q ss_pred             HhhcCCCCCceEEecCCcccHHHHHHHHHHhCCCCCCC
Q 021819          240 LLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVH  277 (307)
Q Consensus       240 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (307)
                      ++++++...|.|+++++..++.|+++.+.+.+|..+++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~  277 (337)
T 2c29_D          240 YLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIP  277 (337)
T ss_dssp             HHHHCTTCCEEEEECCEEEEHHHHHHHHHHHCTTSCCC
T ss_pred             HHhcCcccCceEEEeCCCCCHHHHHHHHHHHCCCccCC
Confidence            99988766678988888899999999999988654443

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=8e-38  Score=270.83  Aligned_cols=245  Identities=21%  Similarity=0.223  Sum_probs=199.4

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEecc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a~   89 (307)
                      |+|+|||||||||++|+++|+++|+ +|++++|+.........      .+++++.+|++|.+ +.+++++ |+|||+|+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~------~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~   71 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGY-EVVVVDNLSSGRREFVN------PSAELHVRDLKDYS-WGAGIKG-DVVFHFAA   71 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSSCCGGGSC------TTSEEECCCTTSTT-TTTTCCC-SEEEECCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCCCCCchhhcC------CCceEEECccccHH-HHhhcCC-CEEEECCC
Confidence            4899999999999999999999999 99999997655433221      17889999999998 8888888 99999999


Q ss_pred             CCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHH
Q 021819           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (307)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (307)
                      .........++...+++|+.++.+++++|++.++++|||+||.+. |+...  ..+++|+++..|.      +.|+.+|.
T Consensus        72 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~v-yg~~~--~~~~~e~~~~~p~------~~Y~~sK~  142 (312)
T 3ko8_A           72 NPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTV-YGDAD--VIPTPEEEPYKPI------SVYGAAKA  142 (312)
T ss_dssp             SCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGG-GCSCS--SSSBCTTSCCCCC------SHHHHHHH
T ss_pred             CCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHH-hCCCC--CCCCCCCCCCCCC------ChHHHHHH
Confidence            765544556678899999999999999999999999999999664 55433  3678888776654      68999999


Q ss_pred             HHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCC-C-CC--CCcccCcccHHHHHHHHHHhhcC-
Q 021819          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK-D-TQ--EYHWLGAVPVKDVAKAQVLLFES-  244 (307)
Q Consensus       170 ~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~-~-~~--~~~~~~~i~~~dva~~~~~~~~~-  244 (307)
                      ++|.+++.++++.+++++++||++||||....  ..+..++.+...+.. . ..  +.+.++++|++|+|++++.++++ 
T Consensus       143 ~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~  220 (312)
T 3ko8_A          143 AGEVMCATYARLFGVRCLAVRYANVVGPRLRH--GVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKF  220 (312)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECEEECTTCCS--SHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEeeccccCcCCCC--ChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhc
Confidence            99999999998889999999999999998654  345566777666633 2 22  34789999999999999999987 


Q ss_pred             --C-CCCceEEec-CCcccHHHHHHHHHHhCCCCC
Q 021819          245 --P-AASGRYLCT-NGIYQFGDFAERVSKLFPEFP  275 (307)
Q Consensus       245 --~-~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~  275 (307)
                        + ...+.|+++ ++.+++.|+++.+.+.+ +.+
T Consensus       221 ~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~-g~~  254 (312)
T 3ko8_A          221 EEMDAPFLALNVGNVDAVRVLDIAQIVAEVL-GLR  254 (312)
T ss_dssp             HHSCCSEEEEEESCSSCEEHHHHHHHHHHHH-TCC
T ss_pred             cccCCCCcEEEEcCCCceeHHHHHHHHHHHh-CCC
Confidence              3 334568776 56799999999999998 444

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=1.3e-37  Score=275.06  Aligned_cols=255  Identities=17%  Similarity=0.121  Sum_probs=203.2

Q ss_pred             Ccccc-ccCCcEEEEeCCchhhHHHHHHHHHH--CCCCeEEEEeCCCCCC-------cccccCCCCCCCceEEEEcccCC
Q 021819            1 MASEA-EKEEETVCVTGANGFIGTWLVKTLLD--NNYTSINATVFPGSDS-------SHLFALPGAGDANLRVFEADVLD   70 (307)
Q Consensus         1 m~~m~-~~~~~~ilItGatG~iG~~l~~~L~~--~g~~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~~i~~D~~d   70 (307)
                      |..|+ .+++|+|+|||||||||++|++.|++  +|+ +|++++|+....       +.+.........++.++.+|++|
T Consensus         1 M~~~~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d   79 (362)
T 3sxp_A            1 MRYIDDELENQTILITGGAGFVGSNLAFHFQENHPKA-KVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINN   79 (362)
T ss_dssp             CCSSSCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTS-EEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTC
T ss_pred             CcccchhcCCCEEEEECCCCHHHHHHHHHHHhhCCCC-eEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCC
Confidence            55444 45688999999999999999999999  899 999999965411       00010000011167899999999


Q ss_pred             hhHHHHH-hcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccC
Q 021819           71 SGAVSRA-VEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        71 ~~~~~~~-~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                      ++++.++ ..++|+|||+||....  ...++...+++|+.++.+++++|++.+++ |||+||.+ +|+...   .+++|+
T Consensus        80 ~~~~~~~~~~~~D~vih~A~~~~~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~-vyg~~~---~~~~E~  152 (362)
T 3sxp_A           80 PLDLRRLEKLHFDYLFHQAAVSDT--TMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAG-VYGNTK---APNVVG  152 (362)
T ss_dssp             HHHHHHHTTSCCSEEEECCCCCGG--GCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGG-GGCSCC---SSBCTT
T ss_pred             HHHHHHhhccCCCEEEECCccCCc--cccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHH-HhCCCC---CCCCCC
Confidence            9999998 7899999999996543  34667899999999999999999999876 99999954 565443   378888


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC---CcchHHHHHHHHcCCCCCC---CC
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDTQ---EY  223 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~---~~  223 (307)
                      ++..|.      ++|+.+|.++|.+++.++.+  ++++++||++||||+....   ...+..++.....+.+...   +.
T Consensus       153 ~~~~p~------~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  224 (362)
T 3sxp_A          153 KNESPE------NVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGE  224 (362)
T ss_dssp             SCCCCS------SHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGC
T ss_pred             CCCCCC------ChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCC
Confidence            876664      78999999999999877554  9999999999999987543   2456677777777776544   34


Q ss_pred             cccCcccHHHHHHHHHHhhcCCCCCceEEec-CCcccHHHHHHHHHHhCC
Q 021819          224 HWLGAVPVKDVAKAQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFP  272 (307)
Q Consensus       224 ~~~~~i~~~dva~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~  272 (307)
                      +.++++|++|+|++++.+++++.. |.|+++ ++.+++.|+++.+.+.++
T Consensus       225 ~~~~~i~v~Dva~ai~~~~~~~~~-g~~~i~~~~~~s~~e~~~~i~~~~g  273 (362)
T 3sxp_A          225 QLRDFVYIEDVIQANVKAMKAQKS-GVYNVGYSQARSYNEIVSILKEHLG  273 (362)
T ss_dssp             CEEECEEHHHHHHHHHHHTTCSSC-EEEEESCSCEEEHHHHHHHHHHHHC
T ss_pred             eEEccEEHHHHHHHHHHHHhcCCC-CEEEeCCCCCccHHHHHHHHHHHcC
Confidence            788999999999999999998754 588875 577999999999999995

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=2.7e-37  Score=268.56  Aligned_cols=249  Identities=18%  Similarity=0.178  Sum_probs=197.3

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcC--ccEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGV   84 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~--~d~v   84 (307)
                      .++|+|+|||||||||++|++.|+++|+ +|++++|+... ..   +      ++.++.+|++|++++.+++++  +|+|
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~-~~---l------~~~~~~~Dl~d~~~~~~~~~~~~~d~v   78 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNV-EVFGTSRNNEA-KL---P------NVEMISLDIMDSQRVKKVISDIKPDYI   78 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCTTC-CC---T------TEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCC-EEEEEecCCcc-cc---c------eeeEEECCCCCHHHHHHHHHhcCCCEE
Confidence            3578999999999999999999999999 99999997654 21   1      678999999999999999975  9999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhc-CCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCcc
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (307)
                      ||+||........+++...+++|+.++.+++++|++. ++++|||+||.++ |+.......+++|+++..+.      +.
T Consensus        79 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v-~g~~~~~~~~~~E~~~~~~~------~~  151 (321)
T 2pk3_A           79 FHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEE-YGMILPEESPVSEENQLRPM------SP  151 (321)
T ss_dssp             EECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGG-TBSCCGGGCSBCTTSCCBCC------SH
T ss_pred             EEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHh-cCCCCCCCCCCCCCCCCCCC------Cc
Confidence            9999976532233456889999999999999999876 5899999999764 44321013578888876553      68


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHc---C--CCCC-C--CCcccCcccHHHHH
Q 021819          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQ---G--SKDT-Q--EYHWLGAVPVKDVA  235 (307)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~---~--~~~~-~--~~~~~~~i~~~dva  235 (307)
                      |+.+|.++|.+++.++++++++++++||++||||..... .....++.....   +  .+.. .  +...+++++++|+|
T Consensus       152 Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva  230 (321)
T 2pk3_A          152 YGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLG-FVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIV  230 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTT-SHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCC-chHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHH
Confidence            999999999999999888899999999999999987543 234455555554   5  2322 2  34678999999999


Q ss_pred             HHHHHhhcCCCCCceEEecC-CcccHHHHHHHHHHhCCCCC
Q 021819          236 KAQVLLFESPAASGRYLCTN-GIYQFGDFAERVSKLFPEFP  275 (307)
Q Consensus       236 ~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~  275 (307)
                      ++++.+++.+..++.|++++ +.+++.|+++.+.+.+ +.+
T Consensus       231 ~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~-g~~  270 (321)
T 2pk3_A          231 QAYWLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMA-NVK  270 (321)
T ss_dssp             HHHHHHHHHCCTTCEEEESCSCEEEHHHHHHHHHHHS-SSC
T ss_pred             HHHHHHHhCCCCCCeEEeCCCCCeeHHHHHHHHHHHh-CCC
Confidence            99999998775556788764 6799999999999999 444

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=3.4e-37  Score=273.80  Aligned_cols=251  Identities=19%  Similarity=0.206  Sum_probs=194.9

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCC-CCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      ++||+|+|||||||||++|+++|+++| + +|++++|+......  .+. . ..+++++.+|++|++++.++++++|+||
T Consensus        30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~--~l~-~-~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi  104 (377)
T 2q1s_A           30 LANTNVMVVGGAGFVGSNLVKRLLELGVN-QVHVVDNLLSAEKI--NVP-D-HPAVRFSETSITDDALLASLQDEYDYVF  104 (377)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCS-EEEEECCCTTCCGG--GSC-C-CTTEEEECSCTTCHHHHHHCCSCCSEEE
T ss_pred             hCCCEEEEECCccHHHHHHHHHHHHcCCc-eEEEEECCCCCchh--hcc-C-CCceEEEECCCCCHHHHHHHhhCCCEEE
Confidence            567899999999999999999999999 8 99999997654321  111 0 1178999999999999999999999999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhc-CCcEEEEecCcceeccCCCCCCcccc--cCC---CC-chhhhc
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPNPGWKGKVFD--ETS---WT-DLEYCK  158 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~iSS~~~~~~~~~~~~~~~~--E~~---~~-~~~~~~  158 (307)
                      |+|+.........++...+++|+.++.+++++|++. ++++|||+||.+ +|+...  ..+++  |++   +. .+    
T Consensus       105 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~-vyg~~~--~~~~~~~E~~~~~~~~~~----  177 (377)
T 2q1s_A          105 HLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGC-SIAEKT--FDDAKATEETDIVSLHNN----  177 (377)
T ss_dssp             ECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC-----------------CCCCCCCSSCC----
T ss_pred             ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHH-HcCCCC--CCCcCcccccccccccCC----
Confidence            999975432112345788999999999999999998 889999999965 454332  24677  776   32 23    


Q ss_pred             ccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCC---------CCC---CcchHHHHHHHHcCCCCCC---CC
Q 021819          159 SRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLM---------QPY---LNASCAVLQQLLQGSKDTQ---EY  223 (307)
Q Consensus       159 ~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~---------~~~---~~~~~~~~~~~~~~~~~~~---~~  223 (307)
                        .++|+.+|..+|.+++.++++.+++++++||+.|||+..         ...   ...+..++.....+.+...   ++
T Consensus       178 --~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~  255 (377)
T 2q1s_A          178 --DSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGV  255 (377)
T ss_dssp             --CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGC
T ss_pred             --CCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCC
Confidence              267999999999999998888899999999999999986         221   2346667777777776543   34


Q ss_pred             cccCcccHHHHHHH-HHHhhcCCCCCceEEecC-CcccHHHHHHHHHHhCC
Q 021819          224 HWLGAVPVKDVAKA-QVLLFESPAASGRYLCTN-GIYQFGDFAERVSKLFP  272 (307)
Q Consensus       224 ~~~~~i~~~dva~~-~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~  272 (307)
                      +.+++++++|+|++ ++.+++++. .|.|++++ +.+++.|+++.+.+.++
T Consensus       256 ~~~~~i~v~Dva~a~i~~~~~~~~-~g~~~i~~~~~~s~~e~~~~i~~~~g  305 (377)
T 2q1s_A          256 ATRDFIFVEDVANGLIACAADGTP-GGVYNIASGKETSIADLATKINEITG  305 (377)
T ss_dssp             CEECCEEHHHHHHHHHHHHHHCCT-TEEEECCCCCCEEHHHHHHHHHHHHT
T ss_pred             eEEeeEEHHHHHHHHHHHHHhcCC-CCeEEecCCCceeHHHHHHHHHHHhC
Confidence            78999999999999 999998876 45888765 67999999999999983

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=3.7e-37  Score=269.89  Aligned_cols=258  Identities=19%  Similarity=0.173  Sum_probs=198.3

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCCCCCceEEEEcccCChhHHHHHhc--CccEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVF   85 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~vi   85 (307)
                      +|+|+|||||||||++|++.|+++|+ +|++++|+........ .+......++.++.+|++|++++.++++  ++|+||
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   83 (341)
T 3enk_A            5 KGTILVTGGAGYIGSHTAVELLAHGY-DVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI   83 (341)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence            57999999999999999999999999 9999999765543221 1100001168899999999999999998  899999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHH
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (307)
                      |+||........+...+.+++|+.++.+++++|++.++++|||+||.+ +|+...  ..+++|+.+..+.      +.|+
T Consensus        84 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~-~~g~~~--~~~~~e~~~~~~~------~~Y~  154 (341)
T 3enk_A           84 HFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSAT-VYGVPE--RSPIDETFPLSAT------NPYG  154 (341)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGG-GBCSCS--SSSBCTTSCCBCS------SHHH
T ss_pred             ECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecce-EecCCC--CCCCCCCCCCCCC------ChhH
Confidence            999986532223344678899999999999999999999999999965 455443  3678888876553      7899


Q ss_pred             HHHHHHHHHHHHHHHhcC-CcEEEEecCceeCCCCCCC--------CcchHHHHHHHHcCCC--CC---------CCCcc
Q 021819          166 VSKTLAEKAAWEFAEKHG-VDVVAIHPATCLGPLMQPY--------LNASCAVLQQLLQGSK--DT---------QEYHW  225 (307)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~-i~~~ivrp~~v~g~~~~~~--------~~~~~~~~~~~~~~~~--~~---------~~~~~  225 (307)
                      .+|.++|.+++.++++.+ ++++++||++||||.....        ...+..++.+...+..  +.         .+.+.
T Consensus       155 ~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~  234 (341)
T 3enk_A          155 QTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGV  234 (341)
T ss_dssp             HHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCE
T ss_pred             HHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCee
Confidence            999999999999988875 9999999999999965321        1223334444444332  11         23578


Q ss_pred             cCcccHHHHHHHHHHhhcCC---CCCceEEec-CCcccHHHHHHHHHHhCCCCCCC
Q 021819          226 LGAVPVKDVAKAQVLLFESP---AASGRYLCT-NGIYQFGDFAERVSKLFPEFPVH  277 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~---~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  277 (307)
                      ++|+|++|+|++++.+++++   ..++.|+++ ++.+++.|+++.+.+.+ +.+.+
T Consensus       235 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~-g~~~~  289 (341)
T 3enk_A          235 RDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKAS-GRAVP  289 (341)
T ss_dssp             ECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHH-CSCCC
T ss_pred             EeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHh-CCCcc
Confidence            89999999999999999862   344578875 57799999999999998 54444

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=1.7e-36  Score=269.44  Aligned_cols=256  Identities=14%  Similarity=0.110  Sum_probs=200.1

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      +||+|+|||||||||++|+++|+++|+ +|++++|+.........      .+++++.+|++|.+++.++++++|+|||+
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~------~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~  100 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGH-YVIASDWKKNEHMTEDM------FCDEFHLVDLRVMENCLKVTEGVDHVFNL  100 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCSSSCGGG------TCSEEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCC-eEEEEECCCccchhhcc------CCceEEECCCCCHHHHHHHhCCCCEEEEC
Confidence            578999999999999999999999999 99999997655432221      16889999999999999999999999999


Q ss_pred             ccCCCCCCC-CChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCC--CCcccccCCCCchhhhcccCccH
Q 021819           88 ASPCTLEDP-VDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW--KGKVFDETSWTDLEYCKSRKKWY  164 (307)
Q Consensus        88 a~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~--~~~~~~E~~~~~~~~~~~~~~~y  164 (307)
                      |+....... ..++.+.+++|+.++.+++++|++.++++|||+||.+.+......  ...+++|+++..    ..+.+.|
T Consensus       101 A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~----~~~~~~Y  176 (379)
T 2c5a_A          101 AADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWP----AEPQDAF  176 (379)
T ss_dssp             CCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSS----BCCSSHH
T ss_pred             ceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCC----CCCCChh
Confidence            997542111 345678999999999999999999999999999996543322110  113577766211    1123689


Q ss_pred             HHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCC---cchHHHHHHHHcCCC-CC-C--CCcccCcccHHHHHHH
Q 021819          165 PVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL---NASCAVLQQLLQGSK-DT-Q--EYHWLGAVPVKDVAKA  237 (307)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~---~~~~~~~~~~~~~~~-~~-~--~~~~~~~i~~~dva~~  237 (307)
                      +.+|.++|.+++.++++++++++++||+.|||+......   ..+..++.....+.+ .. .  +.+.++++|++|+|++
T Consensus       177 ~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a  256 (379)
T 2c5a_A          177 GLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEG  256 (379)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHH
Confidence            999999999999998888999999999999999765421   245667777766654 32 2  3468899999999999


Q ss_pred             HHHhhcCCCCCceEEec-CCcccHHHHHHHHHHhCCCCCC
Q 021819          238 QVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFPV  276 (307)
Q Consensus       238 ~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~  276 (307)
                      ++.+++++ ..+.|+++ ++.+++.|+++.+.+.+ +.+.
T Consensus       257 i~~~l~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~-g~~~  294 (379)
T 2c5a_A          257 VLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFE-EKKL  294 (379)
T ss_dssp             HHHHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTT-TCCC
T ss_pred             HHHHhhcc-CCCeEEeCCCCccCHHHHHHHHHHHh-CCCC
Confidence            99999876 45678765 57799999999999999 4443

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=2.7e-37  Score=267.44  Aligned_cols=249  Identities=25%  Similarity=0.271  Sum_probs=196.4

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEEEEe
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFHV   87 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~vi~~   87 (307)
                      |+|+||||+||||++|+++|+++|+ +|++++|.......  .+.   . ++.++.+|++|++++.++++  ++|+|||+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~--~~~---~-~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~   73 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGL-EVAVLDNLATGKRE--NVP---K-GVPFFRVDLRDKEGVERAFREFRPTHVSHQ   73 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTC-EEEEECCCSSCCGG--GSC---T-TCCEECCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCC-EEEEEECCCcCchh--hcc---c-CeEEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence            3799999999999999999999999 99999885432211  111   1 67788999999999999988  89999999


Q ss_pred             ccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccC-CCCCCcccccCCCCchhhhcccCccHHH
Q 021819           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPN-PGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (307)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~-~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (307)
                      |+........+++...+++|+.++.+++++|++.++++|||+||.+++|+. ..  ..+.+|+++..+.      +.|+.
T Consensus        74 a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~--~~~~~E~~~~~~~------~~Y~~  145 (311)
T 2p5y_A           74 AAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPE--GERAEETWPPRPK------SPYAA  145 (311)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCT--TCCBCTTSCCCCC------SHHHH
T ss_pred             ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCC--CCCcCCCCCCCCC------ChHHH
Confidence            987543212234567899999999999999999998999999997456654 22  2567888765543      68999


Q ss_pred             HHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCC--cchHHHHHHHHcCCCCC--------CCCcccCcccHHHHHH
Q 021819          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKDT--------QEYHWLGAVPVKDVAK  236 (307)
Q Consensus       167 sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~--------~~~~~~~~i~~~dva~  236 (307)
                      +|.++|.+++.++++.+++++++||++||||......  ..+..++.....+.+..        .+.+.++|+|++|+|+
T Consensus       146 sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  225 (311)
T 2p5y_A          146 SKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAE  225 (311)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHH
Confidence            9999999999998888999999999999999865432  24455666666666532        2336789999999999


Q ss_pred             HHHHhhcCCCCCceEEec-CCcccHHHHHHHHHHhCCCCCC
Q 021819          237 AQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFPV  276 (307)
Q Consensus       237 ~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~  276 (307)
                      +++.+++++  ++.|+++ ++.+++.|+++.+.+.+ +.+.
T Consensus       226 a~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~-g~~~  263 (311)
T 2p5y_A          226 AHALALFSL--EGIYNVGTGEGHTTREVLMAVAEAA-GKAP  263 (311)
T ss_dssp             HHHHHHHHC--CEEEEESCSCCEEHHHHHHHHHHHH-TCCC
T ss_pred             HHHHHHhCC--CCEEEeCCCCCccHHHHHHHHHHHh-CCCC
Confidence            999999865  5678776 56799999999999998 4443

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=6.6e-37  Score=267.12  Aligned_cols=252  Identities=16%  Similarity=0.197  Sum_probs=194.4

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~vi~   86 (307)
                      ||+|+|||||||||++|+++|+++|+ +|++++|+.....  ..+.   . +++++.+|++|.+++.++++  ++|+|||
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~--~~~~---~-~~~~~~~D~~~~~~~~~~~~~~~~d~vih   73 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGL-SVVVVDNLQTGHE--DAIT---E-GAKFYNGDLRDKAFLRDVFTQENIEAVMH   73 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCG--GGSC---T-TSEEEECCTTCHHHHHHHHHHSCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCCcCch--hhcC---C-CcEEEECCCCCHHHHHHHHhhcCCCEEEE
Confidence            46999999999999999999999999 9999998654432  1111   1 67899999999999999998  8999999


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHH
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (307)
                      +|+........+++...+++|+.++.+++++|++.++++|||+||.+ +|+...  ..+++|+++..+.      +.|+.
T Consensus        74 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~-~~~~~~--~~~~~E~~~~~~~------~~Y~~  144 (330)
T 2c20_A           74 FAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAA-TYGEVD--VDLITEETMTNPT------NTYGE  144 (330)
T ss_dssp             CCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGG-GGCSCS--SSSBCTTSCCCCS------SHHHH
T ss_pred             CCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCce-eeCCCC--CCCCCcCCCCCCC------ChHHH
Confidence            99975432112345678999999999999999999999999999965 455433  3678898876553      68999


Q ss_pred             HHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC--------CcchHHHHHHHHcCCC-CC---------CCCcccCc
Q 021819          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY--------LNASCAVLQQLLQGSK-DT---------QEYHWLGA  228 (307)
Q Consensus       167 sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~--------~~~~~~~~~~~~~~~~-~~---------~~~~~~~~  228 (307)
                      +|.++|.+++.++++.+++++++||+.|||+.....        ...+..++.......+ +.         .+++.++|
T Consensus       145 sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~  224 (330)
T 2c20_A          145 TKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDY  224 (330)
T ss_dssp             HHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECE
T ss_pred             HHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEee
Confidence            999999999999888899999999999999974321        1233333333332222 21         23467899


Q ss_pred             ccHHHHHHHHHHhhcCCC---CCceEEec-CCcccHHHHHHHHHHhCCCCCCC
Q 021819          229 VPVKDVAKAQVLLFESPA---ASGRYLCT-NGIYQFGDFAERVSKLFPEFPVH  277 (307)
Q Consensus       229 i~~~dva~~~~~~~~~~~---~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  277 (307)
                      +|++|+|++++.+++++.   ..+.|+++ ++.+++.|+++.+.+.+ +.+.+
T Consensus       225 v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~-g~~~~  276 (330)
T 2c20_A          225 IHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVT-NHEIP  276 (330)
T ss_dssp             EEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHT-TSCCC
T ss_pred             EeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHh-CCCCc
Confidence            999999999999997643   23578876 56799999999999999 54443

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=5.3e-37  Score=270.13  Aligned_cols=255  Identities=17%  Similarity=0.158  Sum_probs=200.8

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC-cccccC---CCC-CCCceEEEEcccCChhHHHHHhcCc
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFAL---PGA-GDANLRVFEADVLDSGAVSRAVEGC   81 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~---~~~-~~~~~~~i~~D~~d~~~~~~~~~~~   81 (307)
                      .+||+|+|||||||||++|++.|+++|+ +|++++|+.... +.+..+   ... ...++.++.+|++|.+++.++++++
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~  103 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV  103 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCC
Confidence            4578999999999999999999999999 999999965432 111110   000 0017899999999999999999999


Q ss_pred             cEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccC
Q 021819           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK  161 (307)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  161 (307)
                      |+|||+|+........+++...+++|+.++.+++++|.+.++++|||+||.++ |+...  ..+++|+++..+.      
T Consensus       104 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~-~~~~~--~~~~~E~~~~~~~------  174 (352)
T 1sb8_A          104 DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSST-YGDHP--GLPKVEDTIGKPL------  174 (352)
T ss_dssp             SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGG-GTTCC--CSSBCTTCCCCCC------
T ss_pred             CEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHh-cCCCC--CCCCCCCCCCCCC------
Confidence            99999999754211123457889999999999999999999999999999665 44332  2578888876553      


Q ss_pred             ccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC---CcchHHHHHHHHcCCCCCC---CCcccCcccHHHHH
Q 021819          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVA  235 (307)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~dva  235 (307)
                      +.|+.+|.++|.+++.++++.+++++++||+.|||+.....   ...+..++.....+.+..+   +++.+++++++|+|
T Consensus       175 ~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva  254 (352)
T 1sb8_A          175 SPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTV  254 (352)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHH
Confidence            68999999999999999888899999999999999986543   1345566677777766543   34788999999999


Q ss_pred             HHHHHhhcCC-C-CCceEEec-CCcccHHHHHHHHHHhC
Q 021819          236 KAQVLLFESP-A-ASGRYLCT-NGIYQFGDFAERVSKLF  271 (307)
Q Consensus       236 ~~~~~~~~~~-~-~~g~~~~~-~~~~~~~~~~~~~~~~~  271 (307)
                      ++++.++... . .++.|+++ ++.+++.|+++.+.+.+
T Consensus       255 ~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~  293 (352)
T 1sb8_A          255 QANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGL  293 (352)
T ss_dssp             HHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHH
Confidence            9999998863 2 34578876 56799999999999988

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=7.2e-37  Score=267.69  Aligned_cols=252  Identities=21%  Similarity=0.250  Sum_probs=199.4

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHC---C---CCeEEEEeCCCCC--CcccccCCCCCCCceEEEEcccCChhHHHHHhcCc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDN---N---YTSINATVFPGSD--SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC   81 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~---g---~~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~   81 (307)
                      |+|+|||||||||++|+++|+++   |   + +|++++|+...  ...+..+..  ..++.++.+|++|++++.+++.++
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~   77 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPAD-EVIVLDSLTYAGNRANLAPVDA--DPRLRFVHGDIRDAGLLARELRGV   77 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCS-EEEEEECCCTTCCGGGGGGGTT--CTTEEEEECCTTCHHHHHHHTTTC
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCce-EEEEEECCCccCchhhhhhccc--CCCeEEEEcCCCCHHHHHHHhcCC
Confidence            37999999999999999999996   7   7 99999986432  222222211  127899999999999999999999


Q ss_pred             cEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccC
Q 021819           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK  161 (307)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  161 (307)
                      |+|||+|+.........++...+++|+.++.+++++|.+.++++|||+||.+. |+...  ..+++|+++..+.      
T Consensus        78 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~v-yg~~~--~~~~~E~~~~~~~------  148 (337)
T 1r6d_A           78 DAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQV-YGSID--SGSWTESSPLEPN------  148 (337)
T ss_dssp             CEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGG-GCCCS--SSCBCTTSCCCCC------
T ss_pred             CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHH-hCCCC--CCCCCCCCCCCCC------
Confidence            99999999754211123456789999999999999999999999999999654 54332  2577888765553      


Q ss_pred             ccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC---CCcccCcccHHHHHHHH
Q 021819          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQ  238 (307)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~dva~~~  238 (307)
                      +.|+.+|.++|.+++.++++.+++++++||+.+|||..... ..+..++.....+.+..+   +.+.+++++++|+|+++
T Consensus       149 ~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  227 (337)
T 1r6d_A          149 SPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGI  227 (337)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT-SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCC-ChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHH
Confidence            68999999999999999888899999999999999986432 345566677777665433   34678999999999999


Q ss_pred             HHhhcCCCCCceEEecC-CcccHHHHHHHHHHhCCCCC
Q 021819          239 VLLFESPAASGRYLCTN-GIYQFGDFAERVSKLFPEFP  275 (307)
Q Consensus       239 ~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~  275 (307)
                      +.+++.+..++.|++++ +.+++.|+++.+.+.+ +.+
T Consensus       228 ~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~-g~~  264 (337)
T 1r6d_A          228 ALVLAGGRAGEIYHIGGGLELTNRELTGILLDSL-GAD  264 (337)
T ss_dssp             HHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHH-TCC
T ss_pred             HHHHhCCCCCCEEEeCCCCCccHHHHHHHHHHHh-CCC
Confidence            99998765555788765 5799999999999988 443

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=1.1e-36  Score=266.30  Aligned_cols=250  Identities=18%  Similarity=0.204  Sum_probs=196.5

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCC--CCeEEEEeCCCC--CCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGS--DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g--~~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~v   84 (307)
                      +|+|+|||||||||++|+++|+++|  + +|++++|+..  ..+.+..+..  ..++.++.+|++|++++.+++.++|+|
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~v   79 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDW-EVINIDKLGYGSNPANLKDLED--DPRYTFVKGDVADYELVKELVRKVDGV   79 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTC-EEEEEECCCTTCCGGGGTTTTT--CTTEEEEECCTTCHHHHHHHHHTCSEE
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCC-EEEEEecCcccCchhHHhhhcc--CCceEEEEcCCCCHHHHHHHhhCCCEE
Confidence            3589999999999999999999997  6 8999998642  2222322211  127899999999999999999999999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCC-cEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCcc
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV-RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (307)
                      ||+||.........++...+++|+.++.+++++|.+.+. ++|||+||.+ +|+...  ..+++|+++..+.      +.
T Consensus        80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~-vyg~~~--~~~~~E~~~~~~~------~~  150 (336)
T 2hun_A           80 VHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDE-VYGDIL--KGSFTENDRLMPS------SP  150 (336)
T ss_dssp             EECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGG-GGCCCS--SSCBCTTBCCCCC------SH
T ss_pred             EECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHH-HHCCCC--CCCcCCCCCCCCC------Cc
Confidence            999997542111234568899999999999999998874 7999999965 454432  2578888765543      68


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC---CCcccCcccHHHHHHHHHH
Q 021819          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQVL  240 (307)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~dva~~~~~  240 (307)
                      |+.+|.++|.+++.++++.+++++++||+.|||+..... ..+..++.....+.+...   +.+.+++++++|+|++++.
T Consensus       151 Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  229 (336)
T 2hun_A          151 YSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPE-KLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIEL  229 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTT-SHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcC-chHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHH
Confidence            999999999999999888899999999999999986432 345566667777665443   3467899999999999999


Q ss_pred             hhcCCCCCceEEecC-CcccHHHHHHHHHHhC
Q 021819          241 LFESPAASGRYLCTN-GIYQFGDFAERVSKLF  271 (307)
Q Consensus       241 ~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~  271 (307)
                      +++.+..++.|++++ +.+++.|+++.+.+.+
T Consensus       230 ~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~  261 (336)
T 2hun_A          230 VLLKGESREIYNISAGEEKTNLEVVKIILRLM  261 (336)
T ss_dssp             HHHHCCTTCEEEECCSCEECHHHHHHHHHHHT
T ss_pred             HHhCCCCCCEEEeCCCCcccHHHHHHHHHHHh
Confidence            998765555788765 5699999999999999

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=100.00  E-value=1.6e-37  Score=271.92  Aligned_cols=265  Identities=35%  Similarity=0.617  Sum_probs=189.8

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccc---ccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL---FALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      +|+|||||||||||++|+++|+++|+ +|++++|+.......   ..+. .. .+++++.+|++|++++.++++++|+||
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~~Dl~d~~~~~~~~~~~D~Vi   85 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGY-AVNTTVRDPDNQKKVSHLLELQ-EL-GDLKIFRADLTDELSFEAPIAGCDFVF   85 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTC-EEEEEESCTTCTTTTHHHHHHG-GG-SCEEEEECCTTTSSSSHHHHTTCSEEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCC-EEEEEEcCcchhhhHHHHHhcC-CC-CcEEEEecCCCChHHHHHHHcCCCEEE
Confidence            57999999999999999999999999 999988865432211   1111 01 168899999999999999999999999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcC-CcEEEEecCcceeccCCCC-CCcccccCCCCchhhh--cccC
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGW-KGKVFDETSWTDLEYC--KSRK  161 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~iSS~~~~~~~~~~-~~~~~~E~~~~~~~~~--~~~~  161 (307)
                      |+|+..... ..+...+.+++|+.|+.+++++|.+.+ +++|||+||.+++++.+.. ...+++|+++..+.+.  ..+.
T Consensus        86 h~A~~~~~~-~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  164 (338)
T 2rh8_A           86 HVATPVHFA-SEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPP  164 (338)
T ss_dssp             EESSCCCC----------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CC
T ss_pred             EeCCccCCC-CCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCc
Confidence            999865321 112234589999999999999999986 8999999997765543211 1136788876443221  1111


Q ss_pred             c-cHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCC--------CcccCcccHH
Q 021819          162 K-WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE--------YHWLGAVPVK  232 (307)
Q Consensus       162 ~-~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~i~~~  232 (307)
                      . .|+.+|.++|.+++.++++++++++++||++||||............+.....+....++        ...++|+|++
T Consensus       165 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~v~  244 (338)
T 2rh8_A          165 TWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVE  244 (338)
T ss_dssp             CCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEEHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEEEHH
Confidence            2 599999999999998887789999999999999998654322111222222333321111        1234899999


Q ss_pred             HHHHHHHHhhcCCCCCceEEecCCcccHHHHHHHHHHhCCCCCCC
Q 021819          233 DVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVH  277 (307)
Q Consensus       233 dva~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (307)
                      |+|++++.+++++...|.|+++++.+++.|+++.+.+.+|..++|
T Consensus       245 Dva~a~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~~~~~~~~~  289 (338)
T 2rh8_A          245 DVCRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYKVP  289 (338)
T ss_dssp             HHHHHHHHHHHCTTCCEEEEECSEEECHHHHHHHHHHHCTTSCCC
T ss_pred             HHHHHHHHHHcCCCcCCcEEEecCCCCHHHHHHHHHHhCCCCCCC
Confidence            999999999988766678998888899999999999988644443

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=1.1e-36  Score=267.62  Aligned_cols=251  Identities=17%  Similarity=0.218  Sum_probs=198.1

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHC--CCCeEEEEeCCCCC--CcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGSD--SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~v   84 (307)
                      ||+|+|||||||||++|+++|+++  |+ +|++++|+...  ...+..+..   .++.++.+|++|++++.++++++|+|
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dl~d~~~~~~~~~~~d~v   79 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDV-HVTVLDKLTYAGNKANLEAILG---DRVELVVGDIADAELVDKLAAKADAI   79 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTC-EEEEEECCCTTCCGGGTGGGCS---SSEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCC-EEEEEeCCCCCCChhHHhhhcc---CCeEEEECCCCCHHHHHHHhhcCCEE
Confidence            579999999999999999999998  78 99999996532  222222211   27899999999999999999999999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCC----------CCcccccCCCCch
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW----------KGKVFDETSWTDL  154 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~----------~~~~~~E~~~~~~  154 (307)
                      ||+||.........++...+++|+.++.+++++|.+.++ +|||+||.+. |+....          ...+++|+++..+
T Consensus        80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~v-yg~~~~~~~~~~~~~~~~~~~~E~~~~~~  157 (348)
T 1oc2_A           80 VHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEV-YGDLPLREDLPGHGEGPGEKFTAETNYNP  157 (348)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGG-GCCBCCGGGSTTTTCSTTSSBCTTSCCCC
T ss_pred             EECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccce-eCCCcccccccccccccCCCcCCCCCCCC
Confidence            999997542111234568899999999999999999887 9999999654 432210          1146778776554


Q ss_pred             hhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC---CCcccCcccH
Q 021819          155 EYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAVPV  231 (307)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~  231 (307)
                      .      +.|+.+|..+|.+++.++++.+++++++||+.|||+..... ..+..++.....+.+..+   +.+.++++|+
T Consensus       158 ~------~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  230 (348)
T 1oc2_A          158 S------SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKPKLYGEGKNVRDWIHT  230 (348)
T ss_dssp             C------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-SHHHHHHHHHHHTCCCEEETTSCCEEECEEH
T ss_pred             C------CccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCcc-chHHHHHHHHHcCCCceEecCCCceEeeEEH
Confidence            3      68999999999999999888899999999999999986532 345566677777765443   3467899999


Q ss_pred             HHHHHHHHHhhcCCCCCceEEecC-CcccHHHHHHHHHHhCC
Q 021819          232 KDVAKAQVLLFESPAASGRYLCTN-GIYQFGDFAERVSKLFP  272 (307)
Q Consensus       232 ~dva~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~  272 (307)
                      +|+|++++.+++.+..++.|++++ +.+++.|+++.+.+.++
T Consensus       231 ~Dva~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g  272 (348)
T 1oc2_A          231 NDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMG  272 (348)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhC
Confidence            999999999998765555788765 67999999999999993

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-36  Score=264.21  Aligned_cols=254  Identities=17%  Similarity=0.159  Sum_probs=199.3

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCc--ccccCCCCCCCceEEEEcccCChhHHHHHhcC--ccE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS--HLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKG   83 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~--~d~   83 (307)
                      .+|+|||||||||||++|++.|+++|+ +|++++|+.....  .+..+..  ..++.++.+|++|.+++.+++++  +|+
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   89 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGI--EGDIQYEDGDMADACSVQRAVIKAQPQE   89 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTC--GGGEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCCccccccchhhccc--cCceEEEECCCCCHHHHHHHHHHcCCCE
Confidence            467999999999999999999999999 9999999765421  1221110  11688999999999999999885  699


Q ss_pred             EEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCC-cEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCc
Q 021819           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV-RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (307)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (307)
                      |||+|+.........++...+++|+.++.+++++|++.++ ++|||+||.+ +|+...  ..+++|+++..|.      +
T Consensus        90 Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~-v~g~~~--~~~~~E~~~~~p~------~  160 (335)
T 1rpn_A           90 VYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSE-MFGLIQ--AERQDENTPFYPR------S  160 (335)
T ss_dssp             EEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGG-GGCSCS--SSSBCTTSCCCCC------S
T ss_pred             EEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHH-HhCCCC--CCCCCcccCCCCC------C
Confidence            9999997543222345678999999999999999999886 8999999965 454333  2578888876654      6


Q ss_pred             cHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCC--cchHHHHHHHHcCCCCC--C--CCcccCcccHHHHHH
Q 021819          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKDT--Q--EYHWLGAVPVKDVAK  236 (307)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~--~--~~~~~~~i~~~dva~  236 (307)
                      .|+.+|.++|.+++.++++++++++++||+++|||......  ..+..++.....+....  .  +++.++++|++|+|+
T Consensus       161 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~  240 (335)
T 1rpn_A          161 PYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVE  240 (335)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHH
Confidence            89999999999999998888999999999999999764321  22445555666665332  2  357889999999999


Q ss_pred             HHHHhhcCCCCCceEEec-CCcccHHHHHHHHHHhCCCCC
Q 021819          237 AQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFP  275 (307)
Q Consensus       237 ~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~  275 (307)
                      +++.+++++. .+.|+++ ++.+++.|+++.+.+.+ +.+
T Consensus       241 a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~-g~~  278 (335)
T 1rpn_A          241 AMWLMLQQDK-ADDYVVATGVTTTVRDMCQIAFEHV-GLD  278 (335)
T ss_dssp             HHHHHHHSSS-CCCEEECCSCEEEHHHHHHHHHHTT-TCC
T ss_pred             HHHHHHhcCC-CCEEEEeCCCCccHHHHHHHHHHHh-CCC
Confidence            9999998765 3778775 56799999999999999 444

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=3.9e-37  Score=266.47  Aligned_cols=247  Identities=16%  Similarity=0.167  Sum_probs=193.4

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHC--CCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGV   84 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~v   84 (307)
                      +|+|+|||||||||++|+++|+++  |+ +|++++|+..... +..       ++.++.+|++|.+++.++++  ++|+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~-~~~-------~~~~~~~D~~d~~~~~~~~~~~~~d~v   72 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTE-NVIASDIRKLNTD-VVN-------SGPFEVVNALDFNQIEHLVEVHKITDI   72 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGG-GEEEEESCCCSCH-HHH-------SSCEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCC-EEEEEcCCCcccc-ccC-------CCceEEecCCCHHHHHHHHhhcCCCEE
Confidence            358999999999999999999998  88 8999999765532 111       56789999999999999998  89999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccH
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (307)
                      ||+|+..... ...++...+++|+.++.+++++|++.++++|||+||.+++.....  ..+.+|+++..|.      +.|
T Consensus        73 ih~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~--~~~~~e~~~~~~~------~~Y  143 (312)
T 2yy7_A           73 YLMAALLSAT-AEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTP--KENTPQYTIMEPS------TVY  143 (312)
T ss_dssp             EECCCCCHHH-HHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSC--SSSBCSSCBCCCC------SHH
T ss_pred             EECCccCCCc-hhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCC--CCCccccCcCCCC------chh
Confidence            9999875321 113456789999999999999999999999999999665433222  2467777765543      689


Q ss_pred             HHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCC---cchHHHHHH-HHcCCCCCC--CCcccCcccHHHHHHHH
Q 021819          165 PVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL---NASCAVLQQ-LLQGSKDTQ--EYHWLGAVPVKDVAKAQ  238 (307)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~---~~~~~~~~~-~~~~~~~~~--~~~~~~~i~~~dva~~~  238 (307)
                      +.+|.++|.+++.++++++++++++||+.+||+...+..   ......+.. ...+.....  +++.++|+|++|+|+++
T Consensus       144 ~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  223 (312)
T 2yy7_A          144 GISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDAT  223 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHH
Confidence            999999999999988888999999999999997653321   223333333 333332222  45789999999999999


Q ss_pred             HHhhcCCCC----CceEEecCCcccHHHHHHHHHHhCCC
Q 021819          239 VLLFESPAA----SGRYLCTNGIYQFGDFAERVSKLFPE  273 (307)
Q Consensus       239 ~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~  273 (307)
                      +.+++++..    ++.|+++++.+++.|+++.+.+.++.
T Consensus       224 ~~~~~~~~~~~~~~~~~ni~~~~~s~~e~~~~i~~~~~~  262 (312)
T 2yy7_A          224 INIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKKHIPE  262 (312)
T ss_dssp             HHHHHSCGGGCCCSSCEECCSEEECHHHHHHHHHTTCTT
T ss_pred             HHHHhCcccccccCceEEeCCCccCHHHHHHHHHHHCCC
Confidence            999988654    25799888889999999999999953

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=3.6e-36  Score=263.94  Aligned_cols=253  Identities=19%  Similarity=0.273  Sum_probs=195.8

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHC-CCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCC-hhHHHHHhcCccEEEEe
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD-SGAVSRAVEGCKGVFHV   87 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d-~~~~~~~~~~~d~vi~~   87 (307)
                      |+|+|||||||||++|+++|+++ |+ +|++++|+......+..     ..+++++.+|++| .+.+.++++++|+|||+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~   74 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHY-EVYGLDIGSDAISRFLN-----HPHFHFVEGDISIHSEWIEYHVKKCDVVLPL   74 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTC-EEEEEESCCGGGGGGTT-----CTTEEEEECCTTTCSHHHHHHHHHCSEEEEC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCC-EEEEEeCCcchHHHhhc-----CCCeEEEeccccCcHHHHHhhccCCCEEEEc
Confidence            48999999999999999999998 88 99999997655433211     1178999999998 46688888999999999


Q ss_pred             ccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhh-cccCccHHH
Q 021819           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC-KSRKKWYPV  166 (307)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~-~~~~~~y~~  166 (307)
                      ||.........+....+++|+.++.+++++|++.+ ++|||+||.+ +|+...  ..+++|+++..+..+ ..+.+.|+.
T Consensus        75 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~-v~g~~~--~~~~~e~~~~~~~~~~~~~~~~Y~~  150 (345)
T 2bll_A           75 VAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSE-VYGMCS--DKYFDEDHSNLIVGPVNKPRWIYSV  150 (345)
T ss_dssp             BCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGG-GGBTCC--CSSBCTTTCCCBCCCTTCGGGHHHH
T ss_pred             ccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHH-HcCCCC--CCCcCCcccccccCcccCcccccHH
Confidence            99754211123456788999999999999999988 8999999965 454433  256788775421110 012257999


Q ss_pred             HHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC-------CcchHHHHHHHHcCCCCCC---CCcccCcccHHHHHH
Q 021819          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY-------LNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAK  236 (307)
Q Consensus       167 sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~-------~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~dva~  236 (307)
                      +|..+|.+++.++++.+++++++||+.|||+.....       ...+..++.....+.+...   +.+.++++|++|+|+
T Consensus       151 sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  230 (345)
T 2bll_A          151 SKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIE  230 (345)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHH
Confidence            999999999999888899999999999999986431       2345667777777766433   347889999999999


Q ss_pred             HHHHhhcCCC--C-CceEEecCC--cccHHHHHHHHHHhCC
Q 021819          237 AQVLLFESPA--A-SGRYLCTNG--IYQFGDFAERVSKLFP  272 (307)
Q Consensus       237 ~~~~~~~~~~--~-~g~~~~~~~--~~~~~~~~~~~~~~~~  272 (307)
                      +++.+++++.  . ++.|+++++  .+++.|+++.+.+.++
T Consensus       231 a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g  271 (345)
T 2bll_A          231 ALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFE  271 (345)
T ss_dssp             HHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhC
Confidence            9999998764  3 346887763  6999999999999883

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=1.9e-36  Score=271.41  Aligned_cols=259  Identities=18%  Similarity=0.166  Sum_probs=193.1

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCc-----------------ccccCCCCCCCceEEEEcccC
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS-----------------HLFALPGAGDANLRVFEADVL   69 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-----------------~~~~~~~~~~~~~~~i~~D~~   69 (307)
                      .+|++|||||||||||++|+++|+++|+ +|++++|......                 .+..+......++.++.+|++
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~   87 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNY-EVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDIC   87 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTT
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCC-eEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCC
Confidence            4678999999999999999999999999 9999988532110                 010000000116889999999


Q ss_pred             ChhHHHHHhcC--ccEEEEeccCCCCCCCCChh---hhhhhhhHHHHHHHHHHHHhcCC-cEEEEecCcceeccCCCCCC
Q 021819           70 DSGAVSRAVEG--CKGVFHVASPCTLEDPVDPE---KELILPAVQGTLNVLEAAKRFGV-RRVVVTSSISAIVPNPGWKG  143 (307)
Q Consensus        70 d~~~~~~~~~~--~d~vi~~a~~~~~~~~~~~~---~~~~~~n~~~~~~l~~~~~~~~~-~~~v~iSS~~~~~~~~~~~~  143 (307)
                      |++++.+++++  +|+|||+||.........+.   ...+++|+.++.+++++|++.++ ++|||+||.+ +|+...   
T Consensus        88 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~-vyg~~~---  163 (404)
T 1i24_A           88 DFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMG-EYGTPN---  163 (404)
T ss_dssp             SHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGG-GGCCCS---
T ss_pred             CHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHH-HhCCCC---
Confidence            99999999987  99999999975431111122   35789999999999999999887 5999999965 455432   


Q ss_pred             cccccCCCCchh--------hhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC-------------
Q 021819          144 KVFDETSWTDLE--------YCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY-------------  202 (307)
Q Consensus       144 ~~~~E~~~~~~~--------~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~-------------  202 (307)
                      .+++|+.+....        .+..+.+.|+.+|.++|.+++.++++++++++++||+.||||.....             
T Consensus       164 ~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~  243 (404)
T 1i24_A          164 IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYD  243 (404)
T ss_dssp             SCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCS
T ss_pred             CCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccc
Confidence            345665221100        01122367999999999999988888899999999999999986421             


Q ss_pred             ---CcchHHHHHHHHcCCCCCC---CCcccCcccHHHHHHHHHHhhcCCCCCc---eEEecCCcccHHHHHHHHHHh
Q 021819          203 ---LNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQVLLFESPAASG---RYLCTNGIYQFGDFAERVSKL  270 (307)
Q Consensus       203 ---~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~dva~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~  270 (307)
                         ...+..++.....+.+..+   +.+.++|+|++|+|++++.+++++...|   .|+++++++++.|+++.+.+.
T Consensus       244 ~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~~~~s~~e~~~~i~~~  320 (404)
T 1i24_A          244 AVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKA  320 (404)
T ss_dssp             TTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHH
T ss_pred             cchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECCCCCcHHHHHHHHHHH
Confidence               2456677778787776533   3478999999999999999998876544   698877779999999999997

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=100.00  E-value=1.5e-35  Score=259.53  Aligned_cols=263  Identities=27%  Similarity=0.391  Sum_probs=200.8

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCC-CCCCceEEE-EcccCChhHHHHHhcCccEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG-AGDANLRVF-EADVLDSGAVSRAVEGCKGV   84 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~i-~~D~~d~~~~~~~~~~~d~v   84 (307)
                      .++|+|+||||+||||++|+++|+++|+ +|++++|+......+..... ....+++++ .+|++|.+++.++++++|+|
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   87 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV   87 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence            4568999999999999999999999999 99999997544332221100 000168888 79999999999999999999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHh-cCCcEEEEecCcceeccCCC-CCCcccccCCCCchhh------
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKR-FGVRRVVVTSSISAIVPNPG-WKGKVFDETSWTDLEY------  156 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~iSS~~~~~~~~~-~~~~~~~E~~~~~~~~------  156 (307)
                      ||+|+.....   .++.+.+++|+.++.+++++|.+ .++++|||+||.++++.... ..+.+++|+++.....      
T Consensus        88 ih~A~~~~~~---~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  164 (342)
T 1y1p_A           88 AHIASVVSFS---NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTL  164 (342)
T ss_dssp             EECCCCCSCC---SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHS
T ss_pred             EEeCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhccc
Confidence            9999976542   35678999999999999999985 57899999999766543211 1125788887532110      


Q ss_pred             ----hcccCccHHHHHHHHHHHHHHHHHhc--CCcEEEEecCceeCCCCCCCC--cchHHHHHHHHcCCCCCC-CC-ccc
Q 021819          157 ----CKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKDTQ-EY-HWL  226 (307)
Q Consensus       157 ----~~~~~~~y~~sK~~~e~~~~~~~~~~--~i~~~ivrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~-~~-~~~  226 (307)
                          +..+.+.|+.+|.++|.+++.+++++  +++++++||+.+||+......  .....++..+..+.+..+ +. +.+
T Consensus       165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (342)
T 1y1p_A          165 PESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQ  244 (342)
T ss_dssp             CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSE
T ss_pred             cccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccCCcC
Confidence                01122679999999999999988765  789999999999999875432  256677777777766542 22 578


Q ss_pred             CcccHHHHHHHHHHhhcCCCCCc-eEEecCCcccHHHHHHHHHHhCCC
Q 021819          227 GAVPVKDVAKAQVLLFESPAASG-RYLCTNGIYQFGDFAERVSKLFPE  273 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~  273 (307)
                      +++|++|+|++++.+++++...| .++++++.+++.|+++.+.+.++.
T Consensus       245 ~~v~v~Dva~a~~~~~~~~~~~g~~~~~~g~~~s~~e~~~~i~~~~~~  292 (342)
T 1y1p_A          245 YYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPS  292 (342)
T ss_dssp             EEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTT
T ss_pred             CEeEHHHHHHHHHHHHcCcccCCceEEEeCCCCCHHHHHHHHHHHCCC
Confidence            99999999999999998766555 456667789999999999999954

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=2.3e-36  Score=262.48  Aligned_cols=242  Identities=17%  Similarity=0.122  Sum_probs=189.7

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC----CcccccCCCCCCCceEEEEcccCChhHHHHHhcCcc
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD----SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCK   82 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d   82 (307)
                      .++|+|+|||||||||++|+++|+++|+ +|++++|+...    ...+..+..  ..+++++.+|++          ++|
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~----------~~d   71 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGE-EVTVLDDLRVPPMIPPEGTGKFLE--KPVLELEERDLS----------DVR   71 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTC-CEEEECCCSSCCSSCCTTSSEEEC--SCGGGCCHHHHT----------TEE
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCC-EEEEEecCCcccccchhhhhhhcc--CCCeeEEeCccc----------cCC
Confidence            3467999999999999999999999999 99999997652    222211110  014555666655          899


Q ss_pred             EEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCc
Q 021819           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (307)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (307)
                      +|||+|+..............++ |+.++.+++++|++.++++|||+||.+ +|+...  ..+++|+++..|.      +
T Consensus        72 ~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~-v~~~~~--~~~~~E~~~~~p~------~  141 (321)
T 3vps_A           72 LVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCE-VYGQAD--TLPTPEDSPLSPR------S  141 (321)
T ss_dssp             EEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGG-GGCSCS--SSSBCTTSCCCCC------S
T ss_pred             EEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHH-HhCCCC--CCCCCCCCCCCCC------C
Confidence            99999997653222334456677 999999999999999999999999966 455433  3678898876664      7


Q ss_pred             cHHHHHHHHHHHHHHHHHhcCC-cEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC---CCcccCcccHHHHHHHH
Q 021819          163 WYPVSKTLAEKAAWEFAEKHGV-DVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQ  238 (307)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~i-~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~dva~~~  238 (307)
                      .|+.+|..+|.+++.+++++++ +++++||+.+|||..... ..+..++.....+.+...   +...++++|++|+|+++
T Consensus       142 ~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~  220 (321)
T 3vps_A          142 PYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPD-ALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKL  220 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTT-SHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCC-ChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHH
Confidence            8999999999999999988899 999999999999987653 456677777777766443   44789999999999999


Q ss_pred             HHhhcCCCCCceEEec-CCcccHHHHHHHHHHhCCCCC
Q 021819          239 VLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFP  275 (307)
Q Consensus       239 ~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~  275 (307)
                      +.+++++.. |.|+++ ++.+++.|+++.+. .+ +.+
T Consensus       221 ~~~~~~~~~-g~~~i~~~~~~s~~e~~~~i~-~~-g~~  255 (321)
T 3vps_A          221 VALANRPLP-SVVNFGSGQSLSVNDVIRILQ-AT-SPA  255 (321)
T ss_dssp             HHGGGSCCC-SEEEESCSCCEEHHHHHHHHH-TT-CTT
T ss_pred             HHHHhcCCC-CeEEecCCCcccHHHHHHHHH-Hh-CCC
Confidence            999998877 488876 56799999999999 88 444

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=1.1e-35  Score=245.84  Aligned_cols=221  Identities=20%  Similarity=0.227  Sum_probs=172.2

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      ||+|+|||||||||++|+++|+++|+ +|++++|+++....+.       .++.++.+|++|++++.++++++|+|||+|
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-------~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a   75 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGF-EVTAVVRHPEKIKIEN-------EHLKVKKADVSSLDEVCEVCKGADAVISAF   75 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTC-EEEEECSCGGGCCCCC-------TTEEEECCCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEcCcccchhcc-------CceEEEEecCCCHHHHHHHhcCCCEEEEeC
Confidence            57999999999999999999999999 9999999866544332       179999999999999999999999999999


Q ss_pred             cCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHH
Q 021819           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (307)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (307)
                      +....      ....+++|+.++.+++++|++.++++|||+||.+++++.+.    ...|+++..|.      ++|+.+|
T Consensus        76 ~~~~~------~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~----~~~~~~~~~p~------~~Y~~sK  139 (227)
T 3dhn_A           76 NPGWN------NPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPG----LRLMDSGEVPE------NILPGVK  139 (227)
T ss_dssp             CC------------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETT----EEGGGTTCSCG------GGHHHHH
T ss_pred             cCCCC------ChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCC----CccccCCcchH------HHHHHHH
Confidence            86421      22478999999999999999999999999999876665433    22344444443      6799999


Q ss_pred             HHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCCCCC
Q 021819          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAAS  248 (307)
Q Consensus       169 ~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~~~  248 (307)
                      ..+|.+++.++++.+++++++||+.+||+........        ............+++++++|+|++++.+++++...
T Consensus       140 ~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~~~~  211 (227)
T 3dhn_A          140 ALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTGRYR--------LGKDDMIVDIVGNSHISVEDYAAAMIDELEHPKHH  211 (227)
T ss_dssp             HHHHHHHHTGGGCCSSEEEEEECCSEEESCCCCCCCE--------EESSBCCCCTTSCCEEEHHHHHHHHHHHHHSCCCC
T ss_pred             HHHHHHHHHHhhccCccEEEEeCCcccCCCcccccee--------ecCCCcccCCCCCcEEeHHHHHHHHHHHHhCcccc
Confidence            9999999888777899999999999999986543111        11222222233489999999999999999999876


Q ss_pred             c-eEEecC-CcccHH
Q 021819          249 G-RYLCTN-GIYQFG  261 (307)
Q Consensus       249 g-~~~~~~-~~~~~~  261 (307)
                      | +|++++ ++.++.
T Consensus       212 g~~~~~~~~~~~~~~  226 (227)
T 3dhn_A          212 QERFTIGYLEHHHHH  226 (227)
T ss_dssp             SEEEEEECCSCCC--
T ss_pred             CcEEEEEeehhcccC
Confidence            6 577654 566654

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=1.2e-35  Score=262.20  Aligned_cols=250  Identities=19%  Similarity=0.233  Sum_probs=195.4

Q ss_pred             EEEEeCCchhhHHHHHHHHHHC-CCCeEEEEeCCCC--CCcccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEEE
Q 021819           11 TVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGS--DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVF   85 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~vi   85 (307)
                      +||||||+||||++|++.|+++ |+ +|++++|+..  ..+.+..+..  ..++.++.+|++|++++.++++  ++|+||
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   78 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQD-TVVNIDKLTYAGNLESLSDISE--SNRYNFEHADICDSAEITRIFEQYQPDAVM   78 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSC-EEEEEECCCTTCCGGGGTTTTT--CTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCC-eEEEEecCCCCCchhhhhhhhc--CCCeEEEECCCCCHHHHHHHHhhcCCCEEE
Confidence            7999999999999999999998 78 9999998652  2223322211  1278999999999999999998  899999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhc--CCc-------EEEEecCcceeccCCCCCC--------ccccc
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF--GVR-------RVVVTSSISAIVPNPGWKG--------KVFDE  148 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-------~~v~iSS~~~~~~~~~~~~--------~~~~E  148 (307)
                      |+||........+++...+++|+.++.+++++|.+.  +++       +|||+||.+. |+......        .+++|
T Consensus        79 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v-~g~~~~~~~~~~~~~~~~~~E  157 (361)
T 1kew_A           79 HLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEV-YGDLPHPDEVENSVTLPLFTE  157 (361)
T ss_dssp             ECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGG-GCCCCCGGGSCTTSCCCCBCT
T ss_pred             ECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHH-hCCCcccccccccccCCCCCC
Confidence            999975421122345788999999999999999988  776       9999999654 44322100        16778


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC---CCcc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHW  225 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~  225 (307)
                      +++..+.      +.|+.+|.++|.+++.++++.+++++++||+.|||+..... ..+..++.....+.+...   +.+.
T Consensus       158 ~~~~~~~------~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  230 (361)
T 1kew_A          158 TTAYAPS------SPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQI  230 (361)
T ss_dssp             TSCCCCC------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHHTCCEEEETTSCCE
T ss_pred             CCCCCCC------CccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcc-cHHHHHHHHHHcCCCceEcCCCcee
Confidence            7765443      68999999999999999888899999999999999986432 345566667777665432   3467


Q ss_pred             cCcccHHHHHHHHHHhhcCCCCCceEEecC-CcccHHHHHHHHHHhC
Q 021819          226 LGAVPVKDVAKAQVLLFESPAASGRYLCTN-GIYQFGDFAERVSKLF  271 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~  271 (307)
                      +++++++|+|++++.+++.+..++.|++++ +.+++.|+++.+.+.+
T Consensus       231 ~~~i~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~  277 (361)
T 1kew_A          231 RDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLL  277 (361)
T ss_dssp             EEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHH
T ss_pred             EeeEEHHHHHHHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHHHHHh
Confidence            899999999999999998765555788765 5699999999998877

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-36  Score=265.64  Aligned_cols=254  Identities=16%  Similarity=0.187  Sum_probs=189.8

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC--cccccCCCCCCCceEEEEcccCChhHHHHHhcC--ccEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGV   84 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~--~d~v   84 (307)
                      ||+|||||||||||++|++.|+++|+ +|++++|+....  .....+.. .. ++.++.+|++|++++.+++++  +|+|
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~l~~-~~-~~~~~~~Dl~d~~~~~~~~~~~~~d~v   77 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRKGATDNLHWLSS-LG-NFEFVHGDIRNKNDVTRLITKYMPDSC   77 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSTTHHHHHHHHHT-TC-CCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCC-EEEEEeCCCccCchhhhhhhcc-CC-ceEEEEcCCCCHHHHHHHHhccCCCEE
Confidence            46899999999999999999999999 999999853221  11111111 11 588999999999999999987  9999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEecCcceeccCCCCC--------------CcccccC
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSSISAIVPNPGWK--------------GKVFDET  149 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~iSS~~~~~~~~~~~--------------~~~~~E~  149 (307)
                      ||+||........+++...+++|+.++.+++++|.+.+++ +|||+||.++ |+.....              ..+++|+
T Consensus        78 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v-~g~~~~~~~~e~~~~~~~~~~~~~~~e~  156 (347)
T 1orr_A           78 FHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKV-YGDLEQYKYNETETRYTCVDKPNGYDES  156 (347)
T ss_dssp             EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGG-GTTCTTSCEEECSSCEEETTCTTCBCTT
T ss_pred             EECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHH-hCCCCcCCcccccccccccccccCcccc
Confidence            9999975431112345788999999999999999998875 9999999664 4432210              0124454


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC--CcchHHHHHHHHcCC-----CCC--
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY--LNASCAVLQQLLQGS-----KDT--  220 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~--~~~~~~~~~~~~~~~-----~~~--  220 (307)
                      ++..+      .+.|+.+|.++|.+++.++++.+++++++||+.|||+.....  ...+..++.....+.     +..  
T Consensus       157 ~~~~~------~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (347)
T 1orr_A          157 TQLDF------HSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTIS  230 (347)
T ss_dssp             SCCCC------CHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred             CCCCC------CCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEe
Confidence            44333      267999999999999999888899999999999999986442  123445555554443     322  


Q ss_pred             -CCCcccCcccHHHHHHHHHHhhcC-CCCCc-eEEecCC---cccHHHHHHHHHHhCC
Q 021819          221 -QEYHWLGAVPVKDVAKAQVLLFES-PAASG-RYLCTNG---IYQFGDFAERVSKLFP  272 (307)
Q Consensus       221 -~~~~~~~~i~~~dva~~~~~~~~~-~~~~g-~~~~~~~---~~~~~~~~~~~~~~~~  272 (307)
                       .+.+.+++++++|+|++++.++++ +...| .|+++++   ++++.|+++.+.+.++
T Consensus       231 g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g  288 (347)
T 1orr_A          231 GNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCN  288 (347)
T ss_dssp             SSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHT
T ss_pred             cCCcceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhC
Confidence             244788999999999999999986 22334 6888764   4899999999999983

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=7.4e-36  Score=262.34  Aligned_cols=259  Identities=21%  Similarity=0.191  Sum_probs=192.8

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC------C-cccccCCCCCCCceEEEEcccCChhHHHHHhc--
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD------S-SHLFALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~------~-~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--   79 (307)
                      +|+|+|||||||||++|+++|+++|+ +|++++|+...      . +.+..+......++.++.+|++|++++.++++  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGY-LPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTC-CEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc
Confidence            36899999999999999999999999 89999885433      1 11111100001167899999999999999998  


Q ss_pred             CccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcc
Q 021819           80 GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKS  159 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~  159 (307)
                      ++|+|||+|+........+++.+.+++|+.++.+++++|++.++++|||+||.+ +|+...  ..+++|+++..|.    
T Consensus        81 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~-~~g~~~--~~~~~E~~~~~p~----  153 (348)
T 1ek6_A           81 SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSAT-VYGNPQ--YLPLDEAHPTGGC----  153 (348)
T ss_dssp             CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGG-GGCSCS--SSSBCTTSCCCCC----
T ss_pred             CCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHH-HhCCCC--CCCcCCCCCCCCC----
Confidence            899999999975432122345688999999999999999999999999999965 454433  3678888875541    


Q ss_pred             cCccHHHHHHHHHHHHHHHHHh-cCCcEEEEecCceeCCCCCC---------CCcchHHHHHHHH-cCCCCC--------
Q 021819          160 RKKWYPVSKTLAEKAAWEFAEK-HGVDVVAIHPATCLGPLMQP---------YLNASCAVLQQLL-QGSKDT--------  220 (307)
Q Consensus       160 ~~~~y~~sK~~~e~~~~~~~~~-~~i~~~ivrp~~v~g~~~~~---------~~~~~~~~~~~~~-~~~~~~--------  220 (307)
                       .+.|+.+|.++|.+++.++++ .+++++++||+++||+...+         ....+..++.... .+.++.        
T Consensus       154 -~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  232 (348)
T 1ek6_A          154 -TNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDT  232 (348)
T ss_dssp             -SSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSS
T ss_pred             -CCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccC
Confidence             268999999999999998877 23999999999999995321         1123334444443 333221        


Q ss_pred             -CCCcccCcccHHHHHHHHHHhhcCC--CCC-ceEEec-CCcccHHHHHHHHHHhCCCCCCC
Q 021819          221 -QEYHWLGAVPVKDVAKAQVLLFESP--AAS-GRYLCT-NGIYQFGDFAERVSKLFPEFPVH  277 (307)
Q Consensus       221 -~~~~~~~~i~~~dva~~~~~~~~~~--~~~-g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  277 (307)
                       .+.+.++|+|++|+|++++.+++++  ..+ +.|+++ ++.+++.|+++.+.+.+ +.+.+
T Consensus       233 ~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~-g~~~~  293 (348)
T 1ek6_A          233 EDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKAS-GKKIP  293 (348)
T ss_dssp             SSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHH-CSCCC
T ss_pred             CCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHh-CCCCc
Confidence             2346789999999999999999765  233 478875 56799999999999998 44443

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=8.2e-36  Score=258.42  Aligned_cols=241  Identities=19%  Similarity=0.191  Sum_probs=188.1

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcC--ccEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGVF   85 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~--~d~vi   85 (307)
                      +||+|+|||||||||++|+++|+++|+       +.  .....         .+..+.+|++|++++.+++++  +|+||
T Consensus         5 ~~~~vlVtGatG~iG~~l~~~L~~~g~-------~~--~~~~~---------~~~~~~~D~~d~~~~~~~~~~~~~d~Vi   66 (319)
T 4b8w_A            5 QSMRILVTGGSGLVGKAIQKVVADGAG-------LP--GEDWV---------FVSSKDADLTDTAQTRALFEKVQPTHVI   66 (319)
T ss_dssp             CCCEEEEETCSSHHHHHHHHHHHTTTC-------CT--TCEEE---------ECCTTTCCTTSHHHHHHHHHHSCCSEEE
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhcCC-------cc--ccccc---------ccCceecccCCHHHHHHHHhhcCCCEEE
Confidence            467999999999999999999999987       11  11000         344557999999999999986  99999


Q ss_pred             EeccCCCC-CCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCC----Cchhhhccc
Q 021819           86 HVASPCTL-EDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW----TDLEYCKSR  160 (307)
Q Consensus        86 ~~a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~----~~~~~~~~~  160 (307)
                      |+|+.... ....+++...+++|+.++.+++++|++.++++|||+||.+ +|+...  ..+++|+++    ..|.     
T Consensus        67 h~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~-vyg~~~--~~~~~E~~~~~~~~~p~-----  138 (319)
T 4b8w_A           67 HLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTC-IFPDKT--TYPIDETMIHNGPPHNS-----  138 (319)
T ss_dssp             ECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGG-GSCSSC--CSSBCGGGGGBSCCCSS-----
T ss_pred             ECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchh-hcCCCC--CCCccccccccCCCCCC-----
Confidence            99998542 1123456788999999999999999999999999999965 555433  367888873    2222     


Q ss_pred             CccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC---CcchHHHHHH----HHcCCCCCC---CCcccCccc
Q 021819          161 KKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQ----LLQGSKDTQ---EYHWLGAVP  230 (307)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~---~~~~~~~~~~----~~~~~~~~~---~~~~~~~i~  230 (307)
                      ..+|+.+|.++|.+++.++++.+++++++||++||||.....   ...+..++.+    ...+.+..+   +.+.++++|
T Consensus       139 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~  218 (319)
T 4b8w_A          139 NFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIY  218 (319)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEE
T ss_pred             cchHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEe
Confidence            125999999999999999988999999999999999987542   2344555555    666766543   447889999


Q ss_pred             HHHHHHHHHHhhcCCCC-C-ceEEec-CCcccHHHHHHHHHHhCCCCC
Q 021819          231 VKDVAKAQVLLFESPAA-S-GRYLCT-NGIYQFGDFAERVSKLFPEFP  275 (307)
Q Consensus       231 ~~dva~~~~~~~~~~~~-~-g~~~~~-~~~~~~~~~~~~~~~~~~~~~  275 (307)
                      ++|+|++++.+++++.. . +.|+++ ++.+++.|+++.+.+.+ +.+
T Consensus       219 v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~-g~~  265 (319)
T 4b8w_A          219 SLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAM-DFH  265 (319)
T ss_dssp             HHHHHHHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHT-TCC
T ss_pred             HHHHHHHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHh-CCC
Confidence            99999999999987543 2 368765 57899999999999999 444

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=2e-35  Score=260.61  Aligned_cols=245  Identities=17%  Similarity=0.155  Sum_probs=193.8

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCC-CCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-----C
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----G   80 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----~   80 (307)
                      .++|+|+|||||||||++|+++|+++| + +|++++|+..... ...+.     ++. +.+|++|++.+.++++     +
T Consensus        44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~-~~~~~-----~~~-~~~d~~~~~~~~~~~~~~~~~~  115 (357)
T 2x6t_A           44 IEGRMIIVTGGAGFIGSNIVKALNDKGIT-DILVVDNLKDGTK-FVNLV-----DLN-IADYMDKEDFLIQIMAGEEFGD  115 (357)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCC-CEEEEECCSSGGG-GGGTT-----TSC-CSEEEEHHHHHHHHHTTCCCSS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCc-EEEEEecCCCcch-hhccc-----Cce-EeeecCcHHHHHHHHhhcccCC
Confidence            345799999999999999999999999 7 8999998754421 11121     233 6789999999999887     5


Q ss_pred             ccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhccc
Q 021819           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR  160 (307)
Q Consensus        81 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  160 (307)
                      +|+|||+|+....  ...++.+.+++|+.++.+++++|.+.++ +|||+||.++ |+...  ..+++|+++..|.     
T Consensus       116 ~d~Vih~A~~~~~--~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v-~g~~~--~~~~~E~~~~~p~-----  184 (357)
T 2x6t_A          116 VEAIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAAT-YGGRT--SDFIESREYEKPL-----  184 (357)
T ss_dssp             CCEEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGG-GCSCS--SCCCSSGGGCCCS-----
T ss_pred             CCEEEECCcccCC--ccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHH-hCCCC--CCCcCCcCCCCCC-----
Confidence            9999999997654  3456788999999999999999999988 9999999664 54332  2467888765553     


Q ss_pred             CccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC---CcchHHHHHHHHcCCCCCC---CCc-ccCcccHHH
Q 021819          161 KKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDTQ---EYH-WLGAVPVKD  233 (307)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~-~~~~i~~~d  233 (307)
                       +.|+.+|.++|.+++.++++.+++++++||+.||||.....   ...+..++.....+.+...   +.. .+++++++|
T Consensus       185 -~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  263 (357)
T 2x6t_A          185 -NVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGD  263 (357)
T ss_dssp             -SHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHH
T ss_pred             -ChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHH
Confidence             68999999999999998888899999999999999986532   2445566677777765432   235 789999999


Q ss_pred             HHHHHHHhhcCCCCCceEEec-CCcccHHHHHHHHHHhCC
Q 021819          234 VAKAQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFP  272 (307)
Q Consensus       234 va~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~  272 (307)
                      +|++++.+++++. ++.|+++ ++.+++.|+++.+.+.++
T Consensus       264 va~ai~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g  302 (357)
T 2x6t_A          264 VADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHK  302 (357)
T ss_dssp             HHHHHHHHHHHCC-CEEEEESCSCCEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhcCC-CCeEEecCCCcccHHHHHHHHHHHcC
Confidence            9999999998776 6678876 467999999999999994

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=3e-35  Score=262.98  Aligned_cols=259  Identities=20%  Similarity=0.211  Sum_probs=192.9

Q ss_pred             cEEEEeCCchhhHHHHHHHHH-HCCCCeEEEEeCCCCCC---------cccc----cCCCC-CCCc---eEEEEcccCCh
Q 021819           10 ETVCVTGANGFIGTWLVKTLL-DNNYTSINATVFPGSDS---------SHLF----ALPGA-GDAN---LRVFEADVLDS   71 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~-~~g~~~V~~~~r~~~~~---------~~~~----~~~~~-~~~~---~~~i~~D~~d~   71 (307)
                      |+|||||||||||++|+++|+ ++|+ +|++++|+....         +.+.    .+... ...+   +.++.+|++|+
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNH-SVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCC-EEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCC-EEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            589999999999999999999 9999 999999865432         1121    11100 0013   88999999999


Q ss_pred             hHHHHHhc--C-ccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCC-----CC
Q 021819           72 GAVSRAVE--G-CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW-----KG  143 (307)
Q Consensus        72 ~~~~~~~~--~-~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~-----~~  143 (307)
                      +++.++++  + +|+|||+|+........+++...+++|+.++.+++++|++.++++|||+||.+ +|+....     ..
T Consensus        82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~-v~g~~~~~~~~~~~  160 (397)
T 1gy8_A           82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAA-IFGNPTMGSVSTNA  160 (397)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGG-GTBSCCC-----CC
T ss_pred             HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHH-HhCCCCcccccccc
Confidence            99999987  6 99999999976432112345788999999999999999999999999999955 4543320     12


Q ss_pred             cccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCC--------CCcchHHHH----H
Q 021819          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP--------YLNASCAVL----Q  211 (307)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~--------~~~~~~~~~----~  211 (307)
                      .+++|+++..|.      +.|+.+|.++|.+++.++++.+++++++||+.|||+....        ....+..++    .
T Consensus       161 ~~~~E~~~~~p~------~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~  234 (397)
T 1gy8_A          161 EPIDINAKKSPE------SPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMS  234 (397)
T ss_dssp             CCBCTTSCCBCS------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHH
T ss_pred             cCcCccCCCCCC------CchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHH
Confidence            578888876553      6899999999999999988889999999999999997532        122333333    1


Q ss_pred             HHHcCCC------------CC---------CCCcccCcccHHHHHHHHHHhhcCCC-C-----C---ceEEec-CCcccH
Q 021819          212 QLLQGSK------------DT---------QEYHWLGAVPVKDVAKAQVLLFESPA-A-----S---GRYLCT-NGIYQF  260 (307)
Q Consensus       212 ~~~~~~~------------~~---------~~~~~~~~i~~~dva~~~~~~~~~~~-~-----~---g~~~~~-~~~~~~  260 (307)
                      +...+..            +.         .+.+.++|+|++|+|++++.+++++. .     .   +.|+++ ++++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~  314 (397)
T 1gy8_A          235 DIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSV  314 (397)
T ss_dssp             HHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEH
T ss_pred             HHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccH
Confidence            4334332            11         23467899999999999999987543 1     2   578875 567999


Q ss_pred             HHHHHHHHHhCCCCCCC
Q 021819          261 GDFAERVSKLFPEFPVH  277 (307)
Q Consensus       261 ~~~~~~~~~~~~~~~~~  277 (307)
                      .|+++.+.+.+ +.+.+
T Consensus       315 ~e~~~~i~~~~-g~~~~  330 (397)
T 1gy8_A          315 REVIEVARKTT-GHPIP  330 (397)
T ss_dssp             HHHHHHHHHHH-CCCCC
T ss_pred             HHHHHHHHHHh-CCCCC
Confidence            99999999998 44443

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=6.5e-36  Score=255.79  Aligned_cols=229  Identities=14%  Similarity=0.121  Sum_probs=182.7

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcC-ccEEEEe
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG-CKGVFHV   87 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-~d~vi~~   87 (307)
                      ||+|+||| +||||++|++.|+++|+ +|++++|+.+...          .+++++.+|++|.+++.+++++ +|+|||+
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~----------~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~   70 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGH-EVTGLRRSAQPMP----------AGVQTLIADVTRPDTLASIVHLRPEILVYC   70 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTC-CEEEEECTTSCCC----------TTCCEEECCTTCGGGCTTGGGGCCSEEEEC
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCC-EEEEEeCCccccc----------cCCceEEccCCChHHHHHhhcCCCCEEEEe
Confidence            56899999 59999999999999999 9999999765521          1788999999999999999987 9999999


Q ss_pred             ccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHH
Q 021819           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (307)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (307)
                      |+...     ......+++|+.++.+++++|++.++++|||+||.+ +|+...  +.+++|+++..|.      +.|+.+
T Consensus        71 a~~~~-----~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~-vyg~~~--~~~~~E~~~~~p~------~~Y~~s  136 (286)
T 3gpi_A           71 VAASE-----YSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTG-VYGQEV--EEWLDEDTPPIAK------DFSGKR  136 (286)
T ss_dssp             HHHHH-----HC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGG-GCCCCC--SSEECTTSCCCCC------SHHHHH
T ss_pred             CCCCC-----CCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccE-EEcCCC--CCCCCCCCCCCCC------ChhhHH
Confidence            98632     234678899999999999999999999999999965 455443  3688999877664      789999


Q ss_pred             HHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCC-CCCCCcccCcccHHHHHHHHHHhhcC--
Q 021819          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK-DTQEYHWLGAVPVKDVAKAQVLLFES--  244 (307)
Q Consensus       168 K~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~dva~~~~~~~~~--  244 (307)
                      |.++|.+ +.    . ++++++||+.+||+...       .++..+.. .. ...++..++++|++|+|++++.++++  
T Consensus       137 K~~~E~~-~~----~-~~~~ilR~~~v~G~~~~-------~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  202 (286)
T 3gpi_A          137 MLEAEAL-LA----A-YSSTILRFSGIYGPGRL-------RMIRQAQT-PEQWPARNAWTNRIHRDDGAAFIAYLIQQRS  202 (286)
T ss_dssp             HHHHHHH-GG----G-SSEEEEEECEEEBTTBC-------HHHHHTTC-GGGSCSSBCEECEEEHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHH-Hh----c-CCeEEEecccccCCCch-------hHHHHHHh-cccCCCcCceeEEEEHHHHHHHHHHHHhhhc
Confidence            9999998 53    3 99999999999999854       23333333 22 22345788999999999999999988  


Q ss_pred             -CCCCceEEecC-CcccHHHHHHHHHHhCCCCCCCc
Q 021819          245 -PAASGRYLCTN-GIYQFGDFAERVSKLFPEFPVHR  278 (307)
Q Consensus       245 -~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  278 (307)
                       ...++.|++++ +.+++.|+++.+.+.+ +.+.+.
T Consensus       203 ~~~~~~~~~~~~~~~~s~~e~~~~i~~~~-g~~~~~  237 (286)
T 3gpi_A          203 HAVPERLYIVTDNQPLPVHDLLRWLADRQ-GIAYPA  237 (286)
T ss_dssp             TSCCCSEEEECCSCCEEHHHHHHHHHHHT-TCCCCC
T ss_pred             cCCCCceEEEeCCCCCCHHHHHHHHHHHc-CCCCCC
Confidence             35556888774 6799999999999999 554443

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=7.1e-35  Score=258.74  Aligned_cols=254  Identities=16%  Similarity=0.135  Sum_probs=196.3

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC--cccccCCCC----CCCceEEEEcccCChhHHHHHhcC--c
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGA----GDANLRVFEADVLDSGAVSRAVEG--C   81 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~~~~~~~~~----~~~~~~~i~~D~~d~~~~~~~~~~--~   81 (307)
                      |+|+|||||||||++|++.|+++|+ +|++++|+....  ..+..+...    ...++.++.+|++|++++.+++++  +
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~  103 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGY-EVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP  103 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCC
Confidence            6899999999999999999999999 999999975431  112221100    112688999999999999999885  6


Q ss_pred             cEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCC---cEEEEecCcceeccCCCCCCcccccCCCCchhhhc
Q 021819           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV---RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK  158 (307)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~  158 (307)
                      |+||||||........+++...+++|+.++.+++++|.+.++   ++|||+||.++ |+...  ..+++|+++..+.   
T Consensus       104 d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~-~~~~~--~~~~~E~~~~~~~---  177 (375)
T 1t2a_A          104 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSEL-YGKVQ--EIPQKETTPFYPR---  177 (375)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGG-TCSCS--SSSBCTTSCCCCC---
T ss_pred             CEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhh-hCCCC--CCCCCccCCCCCC---
Confidence            999999997543211234577899999999999999999887   79999999665 44322  2578888776553   


Q ss_pred             ccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCC--cchHHHHHHHHcCCCC--CC--CCcccCcccHH
Q 021819          159 SRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKD--TQ--EYHWLGAVPVK  232 (307)
Q Consensus       159 ~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~--~~--~~~~~~~i~~~  232 (307)
                         +.|+.+|.++|.+++.++++++++++++||+.+|||......  ..+..++.....+...  ..  +++.++|+|++
T Consensus       178 ---~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~  254 (375)
T 1t2a_A          178 ---SPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAK  254 (375)
T ss_dssp             ---SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHH
T ss_pred             ---ChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHH
Confidence               689999999999999998888999999999999999754321  2234455555666432  12  35789999999


Q ss_pred             HHHHHHHHhhcCCCCCceEEec-CCcccHHHHHHHHHHhCCCCC
Q 021819          233 DVAKAQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFP  275 (307)
Q Consensus       233 dva~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~  275 (307)
                      |+|++++.+++++.. +.|+++ ++.+++.|+++.+.+.+ +.+
T Consensus       255 Dva~a~~~~~~~~~~-~~~ni~~~~~~s~~e~~~~i~~~~-g~~  296 (375)
T 1t2a_A          255 DYVEAMWLMLQNDEP-EDFVIATGEVHSVREFVEKSFLHI-GKT  296 (375)
T ss_dssp             HHHHHHHHHHHSSSC-CCEEECCSCCEEHHHHHHHHHHHT-TCC
T ss_pred             HHHHHHHHHHhcCCC-ceEEEeCCCcccHHHHHHHHHHHh-CCC
Confidence            999999999987653 778765 56799999999999999 554

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-34  Score=256.20  Aligned_cols=255  Identities=16%  Similarity=0.151  Sum_probs=195.5

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC--cccccCCCC---CCCceEEEEcccCChhHHHHHhcC--c
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGA---GDANLRVFEADVLDSGAVSRAVEG--C   81 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~~~~~~~~~---~~~~~~~i~~D~~d~~~~~~~~~~--~   81 (307)
                      ||+|+|||||||||++|+++|+++|+ +|++++|+....  ..+..+...   ...++.++.+|++|++++.+++++  +
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   79 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQP   79 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCC
Confidence            46999999999999999999999999 999999975431  122221110   012688999999999999999875  6


Q ss_pred             cEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCC---cEEEEecCcceeccCCCCCCcccccCCCCchhhhc
Q 021819           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV---RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK  158 (307)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~  158 (307)
                      |+|||+||........+++...+++|+.++.+++++|.+.++   ++|||+||.+. |+...  ..+++|+++..+.   
T Consensus        80 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v-~g~~~--~~~~~E~~~~~~~---  153 (372)
T 1db3_A           80 DEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSEL-YGLVQ--EIPQKETTPFYPR---  153 (372)
T ss_dssp             SEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGG-GTTCC--SSSBCTTSCCCCC---
T ss_pred             CEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhh-hCCCC--CCCCCccCCCCCC---
Confidence            999999998665444556678899999999999999999887   79999999654 54333  2578888776553   


Q ss_pred             ccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCC--cchHHHHHHHHcCCCC--CC--CCcccCcccHH
Q 021819          159 SRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKD--TQ--EYHWLGAVPVK  232 (307)
Q Consensus       159 ~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~--~~--~~~~~~~i~~~  232 (307)
                         +.|+.+|.++|.+++.++++++++++++||+++|||......  ..+..++.....+...  ..  +++.++++|++
T Consensus       154 ---~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~  230 (372)
T 1db3_A          154 ---SPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAK  230 (372)
T ss_dssp             ---SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHH
T ss_pred             ---ChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHH
Confidence               689999999999999998888999999999999999764321  2234455556666532  22  35788999999


Q ss_pred             HHHHHHHHhhcCCCCCceEEec-CCcccHHHHHHHHHHhCCCCC
Q 021819          233 DVAKAQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFP  275 (307)
Q Consensus       233 dva~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~  275 (307)
                      |+|++++.+++++. .+.|+++ ++.+++.|+++.+.+.+ +.+
T Consensus       231 Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~-g~~  272 (372)
T 1db3_A          231 DYVKMQWMMLQQEQ-PEDFVIATGVQYSVRQFVEMAAAQL-GIK  272 (372)
T ss_dssp             HHHHHHHHTTSSSS-CCCEEECCCCCEEHHHHHHHHHHTT-TEE
T ss_pred             HHHHHHHHHHhcCC-CceEEEcCCCceeHHHHHHHHHHHh-CCC
Confidence            99999999998765 3678765 56799999999999999 443

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-35  Score=254.46  Aligned_cols=226  Identities=18%  Similarity=0.161  Sum_probs=187.3

Q ss_pred             Cc-EEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEEE
Q 021819            9 EE-TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVF   85 (307)
Q Consensus         9 ~~-~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~vi   85 (307)
                      |+ +|+|||||||||++|++.|+++|+ +|++++|.                     ++|++|.+++.++++  ++|+||
T Consensus         4 M~m~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~---------------------~~D~~d~~~~~~~~~~~~~d~vi   61 (287)
T 3sc6_A            4 MKERVIITGANGQLGKQLQEELNPEEY-DIYPFDKK---------------------LLDITNISQVQQVVQEIRPHIII   61 (287)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHSCTTTE-EEEEECTT---------------------TSCTTCHHHHHHHHHHHCCSEEE
T ss_pred             ceeEEEEECCCCHHHHHHHHHHHhCCC-EEEEeccc---------------------ccCCCCHHHHHHHHHhcCCCEEE
Confidence            44 999999999999999999999999 99999882                     179999999999998  699999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHH
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (307)
                      |+|+.........++...+++|+.++.+++++|++.++ +|||+||... |+...  ..+++|+++..|.      +.|+
T Consensus        62 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~v-y~~~~--~~~~~E~~~~~p~------~~Y~  131 (287)
T 3sc6_A           62 HCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYV-FQGDR--PEGYDEFHNPAPI------NIYG  131 (287)
T ss_dssp             ECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGG-SCCCC--SSCBCTTSCCCCC------SHHH
T ss_pred             ECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhh-cCCCC--CCCCCCCCCCCCC------CHHH
Confidence            99998764333456788999999999999999999987 7999999664 44333  3688999877664      6899


Q ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC-CCcccCcccHHHHHHHHHHhhcC
Q 021819          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ-EYHWLGAVPVKDVAKAQVLLFES  244 (307)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~dva~~~~~~~~~  244 (307)
                      .+|.++|.+++.+    ..+++++||+.||||...   ..+..++.....+.+... +++.++++|++|+|++++.++++
T Consensus       132 ~sK~~~E~~~~~~----~~~~~ilR~~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  204 (287)
T 3sc6_A          132 ASKYAGEQFVKEL----HNKYFIVRTSWLYGKYGN---NFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHT  204 (287)
T ss_dssp             HHHHHHHHHHHHH----CSSEEEEEECSEECSSSC---CHHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHh----CCCcEEEeeeeecCCCCC---cHHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhC
Confidence            9999999999854    558999999999998754   345566666666665543 55889999999999999999998


Q ss_pred             CCCCceEEecC-CcccHHHHHHHHHHhCCCCC
Q 021819          245 PAASGRYLCTN-GIYQFGDFAERVSKLFPEFP  275 (307)
Q Consensus       245 ~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~  275 (307)
                      +. .|.|++++ +.+++.|+++.+.+.+ +.+
T Consensus       205 ~~-~~~~~i~~~~~~s~~e~~~~i~~~~-g~~  234 (287)
T 3sc6_A          205 SL-YGTYHVSNTGSCSWFEFAKKIFSYA-NMK  234 (287)
T ss_dssp             CC-CEEEECCCBSCEEHHHHHHHHHHHH-TCC
T ss_pred             CC-CCeEEEcCCCcccHHHHHHHHHHHc-CCC
Confidence            87 67898765 6699999999999999 443

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=1.7e-34  Score=253.26  Aligned_cols=253  Identities=22%  Similarity=0.297  Sum_probs=191.1

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCc-ccccCCCCCCCceEEEEcccCChhHHHHHhcCccEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS-HLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~v   84 (307)
                      ..++|+|+|||||||||++|+++|+++|+ +|++++|+..... .+..+..  ..++.++.+|+.+..     +.++|+|
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~-----~~~~d~v   95 (343)
T 2b69_A           24 EKDRKRILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIG--HENFELINHDVVEPL-----YIEVDQI   95 (343)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCGGGTGGGTT--CTTEEEEECCTTSCC-----CCCCSEE
T ss_pred             ccCCCEEEEEcCccHHHHHHHHHHHHCCC-EEEEEeCCCccchhhhhhhcc--CCceEEEeCccCChh-----hcCCCEE
Confidence            34678999999999999999999999999 9999999654321 2222111  116899999998863     5789999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccH
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (307)
                      ||+|+.........++...+++|+.++.+++++|++.++ +|||+||.+ +|+...  ..+++|+.+..... ..+.+.|
T Consensus        96 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~-v~g~~~--~~~~~E~~~~~~~~-~~~~~~Y  170 (343)
T 2b69_A           96 YHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSE-VYGDPE--VHPQSEDYWGHVNP-IGPRACY  170 (343)
T ss_dssp             EECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGG-GGBSCS--SSSBCTTCCCBCCS-SSTTHHH
T ss_pred             EECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHH-HhCCCC--CCCCcccccccCCC-CCCCCch
Confidence            999997543222344578899999999999999999886 899999965 455433  25677775322110 1123679


Q ss_pred             HHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC-CcchHHHHHHHHcCCCCCC---CCcccCcccHHHHHHHHHH
Q 021819          165 PVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY-LNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQVL  240 (307)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~dva~~~~~  240 (307)
                      +.+|.++|.+++.++++.+++++++||+.||||..... ...+..++.....+.+..+   +.+.+++++++|+|++++.
T Consensus       171 ~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~  250 (343)
T 2b69_A          171 DEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVA  250 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHH
Confidence            99999999999998888899999999999999976543 2345566677777766432   3478899999999999999


Q ss_pred             hhcCCCCCceEEecC-CcccHHHHHHHHHHhCC
Q 021819          241 LFESPAASGRYLCTN-GIYQFGDFAERVSKLFP  272 (307)
Q Consensus       241 ~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~  272 (307)
                      +++.+. .+.|++++ +.+++.|+++.+.+.++
T Consensus       251 ~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g  282 (343)
T 2b69_A          251 LMNSNV-SSPVNLGNPEEHTILEFAQLIKNLVG  282 (343)
T ss_dssp             HHTSSC-CSCEEESCCCEEEHHHHHHHHHHHHT
T ss_pred             HHhcCC-CCeEEecCCCCCcHHHHHHHHHHHhC
Confidence            998654 56787664 67999999999999983

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=100.00  E-value=1.2e-34  Score=254.08  Aligned_cols=253  Identities=16%  Similarity=0.165  Sum_probs=197.3

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCc--ccccCCCCCCCceEEEEcccCChhHHHHHhcC--ccEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS--HLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGV   84 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~--~d~v   84 (307)
                      +|+|+|||||||||++|+++|+++|+ +|++++|+.....  .+..+.. . .+++++.+|++|++++.+++++  +|+|
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   79 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGY-EVYGADRRSGEFASWRLKELGI-E-NDVKIIHMDLLEFSNIIRTIEKVQPDEV   79 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCCSTTTTHHHHHTTC-T-TTEEECCCCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcccccccHhhccc-c-CceeEEECCCCCHHHHHHHHHhcCCCEE
Confidence            56999999999999999999999999 9999999765432  2222211 1 1688999999999999999885  6999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCC-cEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCcc
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV-RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (307)
                      ||+||........+++...+++|+.++.+++++|.+.++ ++|||+||.+ +|+...  ..+++|+++..+.      +.
T Consensus        80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~-vyg~~~--~~~~~e~~~~~~~------~~  150 (345)
T 2z1m_A           80 YNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSE-MFGKVQ--EIPQTEKTPFYPR------SP  150 (345)
T ss_dssp             EECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGG-GGCSCS--SSSBCTTSCCCCC------SH
T ss_pred             EECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechh-hcCCCC--CCCCCccCCCCCC------Ch
Confidence            999997643222455788999999999999999998886 8999999965 455433  2567888765553      68


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCC--cchHHHHHHHHcCCCCC--C--CCcccCcccHHHHHHH
Q 021819          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKDT--Q--EYHWLGAVPVKDVAKA  237 (307)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~--~--~~~~~~~i~~~dva~~  237 (307)
                      |+.+|..+|.+++.++++.+++++++|+.++|||+.....  ..+..++.+...+....  .  +...++++|++|+|++
T Consensus       151 Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a  230 (345)
T 2z1m_A          151 YAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEA  230 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHH
Confidence            9999999999999998888999999999999999854321  11233344445554322  2  3467889999999999


Q ss_pred             HHHhhcCCCCCceEEec-CCcccHHHHHHHHHHhCCCCC
Q 021819          238 QVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFP  275 (307)
Q Consensus       238 ~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~  275 (307)
                      ++++++++.. +.|+++ ++.+++.|+++.+.+.+ +.+
T Consensus       231 ~~~~~~~~~~-~~~~i~~~~~~s~~e~~~~i~~~~-g~~  267 (345)
T 2z1m_A          231 MWLMMQQPEP-DDYVIATGETHTVREFVEKAAKIA-GFD  267 (345)
T ss_dssp             HHHHHTSSSC-CCEEECCSCCEEHHHHHHHHHHHT-TCC
T ss_pred             HHHHHhCCCC-ceEEEeCCCCccHHHHHHHHHHHh-CCC
Confidence            9999987653 678765 56799999999999999 544

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=3e-34  Score=250.44  Aligned_cols=240  Identities=21%  Similarity=0.218  Sum_probs=187.3

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccc-ccCCCCCCCceEEEEcccCChhHHHHHhc--CccE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE--GCKG   83 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~   83 (307)
                      +++|+|+|||||||||++|+++|+++|+ +|++++|+....... ..+     .++.++.+|++|.+++.++++  ++|+
T Consensus        18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~l-----~~v~~~~~Dl~d~~~~~~~~~~~~~D~   91 (330)
T 2pzm_A           18 GSHMRILITGGAGCLGSNLIEHWLPQGH-EILVIDNFATGKREVLPPV-----AGLSVIEGSVTDAGLLERAFDSFKPTH   91 (330)
T ss_dssp             TTCCEEEEETTTSHHHHHHHHHHGGGTC-EEEEEECCSSSCGGGSCSC-----TTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCccchhhhhcc-----CCceEEEeeCCCHHHHHHHHhhcCCCE
Confidence            4568999999999999999999999999 999999965443211 111     178999999999999999998  9999


Q ss_pred             EEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCcc
Q 021819           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (307)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (307)
                      ||||||..... ...++ . +++|+.++.+++++|.+.++++|||+||.++ |+.......+++|++  .+      .+.
T Consensus        92 vih~A~~~~~~-~~~~~-~-~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~-~~~~~~~~~~~~E~~--~~------~~~  159 (330)
T 2pzm_A           92 VVHSAAAYKDP-DDWAE-D-AATNVQGSINVAKAASKAGVKRLLNFQTALC-YGRPATVPIPIDSPT--AP------FTS  159 (330)
T ss_dssp             EEECCCCCSCT-TCHHH-H-HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGG-GCSCSSSSBCTTCCC--CC------CSH
T ss_pred             EEECCccCCCc-cccCh-h-HHHHHHHHHHHHHHHHHcCCCEEEEecCHHH-hCCCccCCCCcCCCC--CC------CCh
Confidence            99999976542 22233 3 8999999999999999999899999999764 443221012677776  22      267


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCc-ccCcccHHHHHH-HHHHh
Q 021819          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH-WLGAVPVKDVAK-AQVLL  241 (307)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~dva~-~~~~~  241 (307)
                      |+.+|.++|.+++.+    +++++++||+++|||+.  .......++.....+. ...++. .+++++++|+|+ +++.+
T Consensus       160 Y~~sK~~~e~~~~~~----~~~~~~iR~~~v~gp~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~Dva~~a~~~~  232 (330)
T 2pzm_A          160 YGISKTAGEAFLMMS----DVPVVSLRLANVTGPRL--AIGPIPTFYKRLKAGQ-KCFCSDTVRDFLDMSDFLAIADLSL  232 (330)
T ss_dssp             HHHHHHHHHHHHHTC----SSCEEEEEECEEECTTC--CSSHHHHHHHHHHTTC-CCCEESCEECEEEHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHc----CCCEEEEeeeeeECcCC--CCCHHHHHHHHHHcCC-EEeCCCCEecceeHHHHHHHHHHHH
Confidence            999999999998743    89999999999999985  2234455566666655 223222 789999999999 99999


Q ss_pred             hcCCCCCceEEecC-CcccHHHHHHHHHHhCC
Q 021819          242 FESPAASGRYLCTN-GIYQFGDFAERVSKLFP  272 (307)
Q Consensus       242 ~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~  272 (307)
                      ++++. ++.|++++ ..+++.|+++.+.+.++
T Consensus       233 ~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g  263 (330)
T 2pzm_A          233 QEGRP-TGVFNVSTGEGHSIKEVFDVVLDYVG  263 (330)
T ss_dssp             STTCC-CEEEEESCSCCEEHHHHHHHHHHHHT
T ss_pred             hhcCC-CCEEEeCCCCCCCHHHHHHHHHHHhC
Confidence            98766 55788765 67999999999999983

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=100.00  E-value=4.9e-35  Score=267.30  Aligned_cols=274  Identities=20%  Similarity=0.173  Sum_probs=200.8

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHC---CCCeEEEEeCCCCCCccccc---CCCC------------CCCceEEEEccc
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDN---NYTSINATVFPGSDSSHLFA---LPGA------------GDANLRVFEADV   68 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~---g~~~V~~~~r~~~~~~~~~~---~~~~------------~~~~~~~i~~D~   68 (307)
                      .++|+|+|||||||||++|+++|+++   |+ +|++++|+.........   ....            ...++.++.+|+
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~-~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl  149 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDG-RLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK  149 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTC-EEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCC-EEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence            45889999999999999999999999   88 99999997654321111   0000            012799999999


Q ss_pred             C------ChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCC
Q 021819           69 L------DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWK  142 (307)
Q Consensus        69 ~------d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~  142 (307)
                      +      |.+++.++++++|+||||||....    ..+.+.+++|+.++.+++++|.+.++++|||+||.+ +|+...  
T Consensus       150 ~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~----~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~-v~~~~~--  222 (478)
T 4dqv_A          150 SEPDLGLDQPMWRRLAETVDLIVDSAAMVNA----FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTAD-VGAAIE--  222 (478)
T ss_dssp             TSGGGGCCHHHHHHHHHHCCEEEECCSSCSB----SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGG-GGTTSC--
T ss_pred             CCcccCCCHHHHHHHHcCCCEEEECccccCC----cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehh-hcCccC--
Confidence            8      667899999999999999998764    445688999999999999999999999999999965 455433  


Q ss_pred             CcccccCCCCchhhhc-----ccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCC-C---CCcchHHHHHHH
Q 021819          143 GKVFDETSWTDLEYCK-----SRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ-P---YLNASCAVLQQL  213 (307)
Q Consensus       143 ~~~~~E~~~~~~~~~~-----~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~-~---~~~~~~~~~~~~  213 (307)
                      ..+++|+++..+..+.     ...+.|+.+|.++|.+++.++++.+++++++||++|||+... +   ....+..++...
T Consensus       223 ~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~  302 (478)
T 4dqv_A          223 PSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSL  302 (478)
T ss_dssp             TTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHH
T ss_pred             CCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHH
Confidence            2577888765443210     112459999999999999998878999999999999998652 2   123344444443


Q ss_pred             Hc-CCC-CCC---------CCcccCcccHHHHHHHHHHhhcC----CCC-CceEEecC-Cc--ccHHHHHHHHHHhCCCC
Q 021819          214 LQ-GSK-DTQ---------EYHWLGAVPVKDVAKAQVLLFES----PAA-SGRYLCTN-GI--YQFGDFAERVSKLFPEF  274 (307)
Q Consensus       214 ~~-~~~-~~~---------~~~~~~~i~~~dva~~~~~~~~~----~~~-~g~~~~~~-~~--~~~~~~~~~~~~~~~~~  274 (307)
                      .. +.. ..+         ++..++++|++|+|++++.++..    +.. .+.|++++ +.  +++.|+++.+.+.  +.
T Consensus       303 ~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~--g~  380 (478)
T 4dqv_A          303 MATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA--GY  380 (478)
T ss_dssp             HHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT--TC
T ss_pred             HHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc--CC
Confidence            33 221 111         14678999999999999999875    333 34798765 55  9999999999985  45


Q ss_pred             CCCc--cccCCchHHHHH
Q 021819          275 PVHR--FVFQSPLRFILW  290 (307)
Q Consensus       275 ~~~~--~~~~~~~~~~~~  290 (307)
                      +.+.  +++.|+.++...
T Consensus       381 ~~~~i~~~~~w~~~l~~~  398 (478)
T 4dqv_A          381 PIRRIDDFAEWLQRFEAS  398 (478)
T ss_dssp             SCEEESSHHHHHHHHHHH
T ss_pred             CcccCCCHHHHHHHHHHH
Confidence            4443  234455554443

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=4.4e-35  Score=253.30  Aligned_cols=241  Identities=17%  Similarity=0.167  Sum_probs=184.7

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCC-CCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcC-----ccEE
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG-----CKGV   84 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----~d~v   84 (307)
                      +|+|||||||||++|+++|+++| + +|++++|++.... ...+.     ++. +.+|++|.+.+.+++++     +|+|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~-~~~~~-----~~~-~~~d~~~~~~~~~~~~~~~~~~~d~v   72 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGIT-DILVVDNLKDGTK-FVNLV-----DLN-IADYMDKEDFLIQIMAGEEFGDVEAI   72 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCC-CEEEEECCSSGGG-GHHHH-----TSC-CSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCc-EEEEEccCCCCch-hhhcC-----cce-eccccccHHHHHHHHhccccCCCcEE
Confidence            48999999999999999999999 7 8999998754421 11111     223 67899999999999875     9999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccH
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (307)
                      ||+|+....  ...+....+++|+.++.+++++|++.++ +|||+||.+ +|+...  ..+++|+++..|.      +.|
T Consensus        73 i~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~-v~g~~~--~~~~~E~~~~~p~------~~Y  140 (310)
T 1eq2_A           73 FHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAA-TYGGRT--SDFIESREYEKPL------NVY  140 (310)
T ss_dssp             EECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGG-GGTTCC--SCBCSSGGGCCCS------SHH
T ss_pred             EECcccccC--cccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHH-HhCCCC--CCCCCCCCCCCCC------Chh
Confidence            999997654  3456778999999999999999999998 999999965 454333  2477888765553      689


Q ss_pred             HHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC---CcchHHHHHHHHcCCCCCC---CCc-ccCcccHHHHHHH
Q 021819          165 PVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDTQ---EYH-WLGAVPVKDVAKA  237 (307)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~-~~~~i~~~dva~~  237 (307)
                      +.+|..+|.+++.++++.+++++++||+.||||.....   ...+..++.....+.+...   +.. .++++|++|+|++
T Consensus       141 ~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~  220 (310)
T 1eq2_A          141 GYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADV  220 (310)
T ss_dssp             HHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHH
Confidence            99999999999998877899999999999999986421   2445667777777765443   336 8899999999999


Q ss_pred             HHHhhcCCCCCceEEec-CCcccHHHHHHHHHHhCC
Q 021819          238 QVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFP  272 (307)
Q Consensus       238 ~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~  272 (307)
                      ++.+++++. .+.|+++ ++.+++.|+++.+.+.++
T Consensus       221 ~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g  255 (310)
T 1eq2_A          221 NLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHK  255 (310)
T ss_dssp             HHHHHHHCC-CEEEEESCSCCBCHHHHHHHC-----
T ss_pred             HHHHHhcCC-CCeEEEeCCCccCHHHHHHHHHHHcC
Confidence            999998776 6678876 468999999999999983

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=100.00  E-value=1.2e-34  Score=251.52  Aligned_cols=244  Identities=24%  Similarity=0.306  Sum_probs=189.4

Q ss_pred             EEEEeCCchhhHHHHHHHHHHC--CCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEEEE
Q 021819           11 TVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~vi~   86 (307)
                      +|+|||||||||++|+++|+++  |+ +|++++|+.....           ++.++.+|++|++++.++++  ++|+|||
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~-----------~~~~~~~D~~d~~~~~~~~~~~~~d~vih   68 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKK-NVIASDIVQRDTG-----------GIKFITLDVSNRDEIDRAVEKYSIDAIFH   68 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGG-GEEEEESSCCCCT-----------TCCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCC-EEEEecCCCcccc-----------CceEEEecCCCHHHHHHHHhhcCCcEEEE
Confidence            4899999999999999999998  78 8999988654321           35688999999999999998  8999999


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHH
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (307)
                      +|+..... ...++...+++|+.++.+++++|++.++++|||+||.+++.....  ..+.+|+++..|.      +.|+.
T Consensus        69 ~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~--~~~~~e~~~~~p~------~~Y~~  139 (317)
T 3ajr_A           69 LAGILSAK-GEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETP--KNKVPSITITRPR------TMFGV  139 (317)
T ss_dssp             CCCCCHHH-HHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSC--SSSBCSSSCCCCC------SHHHH
T ss_pred             CCcccCCc-cccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCC--CCCccccccCCCC------chHHH
Confidence            99874321 113456789999999999999999999999999999765433212  2456677655543      68999


Q ss_pred             HHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC---CcchHHHHHHHHcCCCC-CC--CCcccCcccHHHHHHHHHH
Q 021819          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKD-TQ--EYHWLGAVPVKDVAKAQVL  240 (307)
Q Consensus       167 sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~-~~--~~~~~~~i~~~dva~~~~~  240 (307)
                      +|.++|.+++.++++++++++++||+.+||+.....   .......+.+...+... ..  ++..++++|++|+|++++.
T Consensus       140 sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  219 (317)
T 3ajr_A          140 TKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVD  219 (317)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHH
Confidence            999999999988888899999999999999764322   12223333333333332 22  4578899999999999999


Q ss_pred             hhcCCCC----CceEEecCCcccHHHHHHHHHHhCCCCC
Q 021819          241 LFESPAA----SGRYLCTNGIYQFGDFAERVSKLFPEFP  275 (307)
Q Consensus       241 ~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (307)
                      +++++..    ++.|+++++.+++.|+++.+.+.++..+
T Consensus       220 ~l~~~~~~~~~g~~~~i~~~~~s~~e~~~~i~~~~~~~~  258 (317)
T 3ajr_A          220 LYEADRDKLVLRNGYNVTAYTFTPSELYSKIKERIPEFE  258 (317)
T ss_dssp             HHHCCGGGCSSCSCEECCSEEECHHHHHHHHHTTCCSCC
T ss_pred             HHhCCccccccCceEecCCccccHHHHHHHHHHHCCccc
Confidence            9987653    2579988878999999999999995433

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=1.2e-33  Score=246.92  Aligned_cols=241  Identities=22%  Similarity=0.199  Sum_probs=185.2

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCc-ccccCCCCCCCceEEEEcccCChhHHHHHhcC--cc
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS-HLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CK   82 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~--~d   82 (307)
                      ..+||+|+|||||||||++|+++|+++|+ +|++++|+..... .+..+     .++.++.+|++|++++.+++++  +|
T Consensus        18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~l~~~-----~~~~~~~~Dl~d~~~~~~~~~~~~~D   91 (333)
T 2q1w_A           18 GSHMKKVFITGICGQIGSHIAELLLERGD-KVVGIDNFATGRREHLKDH-----PNLTFVEGSIADHALVNQLIGDLQPD   91 (333)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCGGGSCCC-----TTEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCCccchhhHhhc-----CCceEEEEeCCCHHHHHHHHhccCCc
Confidence            34688999999999999999999999999 9999999754322 22211     1788999999999999999987  99


Q ss_pred             EEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccC-CCCCCcccccCCCCchhhhcccC
Q 021819           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPN-PGWKGKVFDETSWTDLEYCKSRK  161 (307)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~-~~~~~~~~~E~~~~~~~~~~~~~  161 (307)
                      +|||+||..... ...++ . +++|+.++.+++++|.+.++++|||+||.++ |+. +.....+++|++  .|.     .
T Consensus        92 ~vih~A~~~~~~-~~~~~-~-~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~-~g~~~~~~~~~~~E~~--~p~-----~  160 (333)
T 2q1w_A           92 AVVHTAASYKDP-DDWYN-D-TLTNCVGGSNVVQAAKKNNVGRFVYFQTALC-YGVKPIQQPVRLDHPR--NPA-----N  160 (333)
T ss_dssp             EEEECCCCCSCT-TCHHH-H-HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGG-GCSCCCSSSBCTTSCC--CCT-----T
T ss_pred             EEEECceecCCC-ccCCh-H-HHHHHHHHHHHHHHHHHhCCCEEEEECcHHH-hCCCcccCCCCcCCCC--CCC-----C
Confidence            999999976542 22222 3 8999999999999999999999999999654 441 101112677775  221     1


Q ss_pred             ccHHHHHHHHHHHHHH-HHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC-CCcccCcccHHHHHHHHH
Q 021819          162 KWYPVSKTLAEKAAWE-FAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ-EYHWLGAVPVKDVAKAQV  239 (307)
Q Consensus       162 ~~y~~sK~~~e~~~~~-~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~dva~~~~  239 (307)
                      +.|+.+|.++|.+++. +    . +++++||+++|||...  ...+..++.....+. ... +...+++++++|+|++++
T Consensus       161 ~~Y~~sK~~~E~~~~~s~----~-~~~ilR~~~v~gp~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~Dva~ai~  232 (333)
T 2q1w_A          161 SSYAISKSANEDYLEYSG----L-DFVTFRLANVVGPRNV--SGPLPIFFQRLSEGK-KCFVTKARRDFVFVKDLARATV  232 (333)
T ss_dssp             CHHHHHHHHHHHHHHHHT----C-CEEEEEESEEESTTCC--SSHHHHHHHHHHTTC-CCEEEECEECEEEHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHhhh----C-CeEEEeeceEECcCCc--CcHHHHHHHHHHcCC-eeeCCCceEeeEEHHHHHHHHH
Confidence            5799999999999975 4    2 8999999999999832  244556666666655 222 356789999999999999


Q ss_pred             HhhcCCCCCceEEecC-CcccHHHHHHHHHHhCC
Q 021819          240 LLFESPAASGRYLCTN-GIYQFGDFAERVSKLFP  272 (307)
Q Consensus       240 ~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~  272 (307)
                      .+++++. ++.|++++ +.+++.|+++.+.+.++
T Consensus       233 ~~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g  265 (333)
T 2q1w_A          233 RAVDGVG-HGAYHFSSGTDVAIKELYDAVVEAMA  265 (333)
T ss_dssp             HHHTTCC-CEEEECSCSCCEEHHHHHHHHHHHTT
T ss_pred             HHHhcCC-CCEEEeCCCCCccHHHHHHHHHHHhC
Confidence            9998876 56788764 67999999999999993

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=100.00  E-value=4.1e-35  Score=257.06  Aligned_cols=236  Identities=16%  Similarity=0.120  Sum_probs=189.0

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHC-CCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      +++|+|+||||||+||++|+++|+++ |+.+|++++|++.+...+..... . .++.++.+|++|.+++.++++++|+||
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~-~-~~v~~~~~Dl~d~~~l~~~~~~~D~Vi   96 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN-D-PRMRFFIGDVRDLERLNYALEGVDICI   96 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC-C-TTEEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc-C-CCEEEEECCCCCHHHHHHHHhcCCEEE
Confidence            45789999999999999999999999 96689999997554332221110 1 178999999999999999999999999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHH
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (307)
                      |+||..........+.+.+++|+.|+.+++++|.+.++++||++||..++.+                       .+.|+
T Consensus        97 h~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~p-----------------------~~~Y~  153 (344)
T 2gn4_A           97 HAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAANP-----------------------INLYG  153 (344)
T ss_dssp             ECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSSC-----------------------CSHHH
T ss_pred             ECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCCC-----------------------ccHHH
Confidence            9999764321122356899999999999999999999999999999654211                       15799


Q ss_pred             HHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCC-CCCC--CCcccCcccHHHHHHHHH
Q 021819          166 VSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS-KDTQ--EYHWLGAVPVKDVAKAQV  239 (307)
Q Consensus       166 ~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~i~~~dva~~~~  239 (307)
                      .+|.++|.+++.+++.   .+++++++||++|||+..    ..+..+...+..+. +..+  +...++|++++|+|++++
T Consensus       154 ~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~----~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~  229 (344)
T 2gn4_A          154 ATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRG----SVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVL  229 (344)
T ss_dssp             HHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTT----SHHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCC----CHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHH
Confidence            9999999999887653   589999999999999873    34556666777776 4443  446788999999999999


Q ss_pred             HhhcCCCCCceEEecCCcccHHHHHHHHHHhC
Q 021819          240 LLFESPAASGRYLCTNGIYQFGDFAERVSKLF  271 (307)
Q Consensus       240 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  271 (307)
                      .+++++..+..|++.+..+++.|+++.+.+..
T Consensus       230 ~~l~~~~~g~~~~~~~~~~s~~el~~~i~~~~  261 (344)
T 2gn4_A          230 KSLKRMHGGEIFVPKIPSMKMTDLAKALAPNT  261 (344)
T ss_dssp             HHHHHCCSSCEEEECCCEEEHHHHHHHHCTTC
T ss_pred             HHHhhccCCCEEecCCCcEEHHHHHHHHHHhC
Confidence            99987655457888877899999999998765

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=1.3e-34  Score=251.56  Aligned_cols=237  Identities=16%  Similarity=0.175  Sum_probs=187.0

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~vi~   86 (307)
                      +|+|+|||||||||++|+++|+++|+ +|++++|+.                    .+|++|.+++.++++  ++|+|||
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~-~v~~~~r~~--------------------~~D~~d~~~~~~~~~~~~~d~vih   61 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGD-VELVLRTRD--------------------ELNLLDSRAVHDFFASERIDQVYL   61 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTT-EEEECCCTT--------------------TCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEecCc--------------------cCCccCHHHHHHHHHhcCCCEEEE
Confidence            46999999999999999999999999 888877642                    169999999999998  9999999


Q ss_pred             eccCCCC-CCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCC----CchhhhcccC
Q 021819           87 VASPCTL-EDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW----TDLEYCKSRK  161 (307)
Q Consensus        87 ~a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~----~~~~~~~~~~  161 (307)
                      +|+.... .....+....+++|+.++.+++++|++.++++|||+||... |+...  ..+++|+++    ..|.     .
T Consensus        62 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~v-yg~~~--~~~~~E~~~~~~~~~p~-----~  133 (321)
T 1e6u_A           62 AAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCI-YPKLA--KQPMAESELLQGTLEPT-----N  133 (321)
T ss_dssp             CCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGG-SCTTC--CSSBCGGGTTSSCCCGG-----G
T ss_pred             cCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHH-cCCCC--CCCcCccccccCCCCCC-----C
Confidence            9987532 00122456789999999999999999999999999999664 44332  357788763    2221     1


Q ss_pred             ccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC---CcchHHHHHHHHc----C-CCCC---CCCcccCccc
Q 021819          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQ----G-SKDT---QEYHWLGAVP  230 (307)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~---~~~~~~~~~~~~~----~-~~~~---~~~~~~~~i~  230 (307)
                      +.|+.+|..+|.+++.++++.+++++++||+.|||+.....   ...+..++..+..    + .+..   .++..++|+|
T Consensus       134 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~  213 (321)
T 1e6u_A          134 EPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLH  213 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEE
T ss_pred             CccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEE
Confidence            47999999999999998888899999999999999987532   2345556665543    2 3332   2457889999


Q ss_pred             HHHHHHHHHHhhcCCCC---------CceEEec-CCcccHHHHHHHHHHhCCCCC
Q 021819          231 VKDVAKAQVLLFESPAA---------SGRYLCT-NGIYQFGDFAERVSKLFPEFP  275 (307)
Q Consensus       231 ~~dva~~~~~~~~~~~~---------~g~~~~~-~~~~~~~~~~~~~~~~~~~~~  275 (307)
                      ++|+|++++.+++++..         .+.|+++ ++.+++.|+++.+.+.+ +.+
T Consensus       214 v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~-g~~  267 (321)
T 1e6u_A          214 VDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVV-GYK  267 (321)
T ss_dssp             HHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHH-TCC
T ss_pred             HHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHh-CCC
Confidence            99999999999988754         3678875 56799999999999998 443

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.9e-34  Score=252.81  Aligned_cols=248  Identities=16%  Similarity=0.093  Sum_probs=195.7

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCC-------CCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNN-------YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g-------~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~   79 (307)
                      +++|+|+||||+||||++|+++|+++|       + +|++++|+.......      ...++.++.+|++|++++.++++
T Consensus        12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~-~V~~~~r~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~   84 (342)
T 2hrz_A           12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVE-KFTLIDVFQPEAPAG------FSGAVDARAADLSAPGEAEKLVE   84 (342)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEE-EEEEEESSCCCCCTT------CCSEEEEEECCTTSTTHHHHHHH
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCc-eEEEEEccCCccccc------cCCceeEEEcCCCCHHHHHHHHh
Confidence            357799999999999999999999999       6 899999975433210      11178899999999999999885


Q ss_pred             -CccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcC-----CcEEEEecCcceeccCCCCCCcccccCCCCc
Q 021819           80 -GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-----VRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~  153 (307)
                       ++|+|||+||.... ...+++...+++|+.++.+++++|++.+     +++|||+||.++ |+...  ..+++|+++..
T Consensus        85 ~~~d~vih~A~~~~~-~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~-~~~~~--~~~~~E~~~~~  160 (342)
T 2hrz_A           85 ARPDVIFHLAAIVSG-EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAV-FGAPL--PYPIPDEFHTT  160 (342)
T ss_dssp             TCCSEEEECCCCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGG-CCSSC--CSSBCTTCCCC
T ss_pred             cCCCEEEECCccCcc-cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHh-hCCCC--CCCcCCCCCCC
Confidence             89999999997531 1123457889999999999999998876     789999999754 44332  25788988766


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeC-CCCCCC--CcchHHHHHHHHcCCCCCC---CCcccC
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLG-PLMQPY--LNASCAVLQQLLQGSKDTQ---EYHWLG  227 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g-~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~  227 (307)
                      +.      +.|+.+|.++|.+++.++++.+++++++|++.+|| |+....  ...+..++.....+.+..+   +....+
T Consensus       161 ~~------~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (342)
T 2hrz_A          161 PL------TSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHW  234 (342)
T ss_dssp             CS------SHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEE
T ss_pred             Cc------chHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCcccee
Confidence            54      68999999999999999888899999999999998 654322  2344556666666665332   235567


Q ss_pred             cccHHHHHHHHHHhhcCCC----CCceEEecCCcccHHHHHHHHHHhC
Q 021819          228 AVPVKDVAKAQVLLFESPA----ASGRYLCTNGIYQFGDFAERVSKLF  271 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~  271 (307)
                      +++++|+|++++.+++.+.    ..+.|+++++.+++.|+++.+.+.+
T Consensus       235 ~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~g~~~s~~e~~~~i~~~~  282 (342)
T 2hrz_A          235 HASPRSAVGFLIHGAMIDVEKVGPRRNLSMPGLSATVGEQIEALRKVA  282 (342)
T ss_dssp             EECHHHHHHHHHHHHHSCHHHHCSCCEEECCCEEEEHHHHHHHHHHHH
T ss_pred             eEehHHHHHHHHHHHhccccccCCccEEEcCCCCCCHHHHHHHHHHHc
Confidence            8999999999999998764    3457888877899999999999988

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=100.00  E-value=1.1e-34  Score=251.58  Aligned_cols=236  Identities=19%  Similarity=0.196  Sum_probs=160.7

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcC--ccEEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGVFH   86 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~--~d~vi~   86 (307)
                      +|+|+|||||||||++|+++|+++|+ +|++++|+...           . +  ++.+|++|++++.+++++  +|+|||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-----------~-~--~~~~Dl~d~~~~~~~~~~~~~d~vih   66 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNW-HAVGCGFRRAR-----------P-K--FEQVNLLDSNAVHHIIHDFQPHVIVH   66 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEC--------------------------------CHHHHHHHCCSEEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCC-eEEEEccCCCC-----------C-C--eEEecCCCHHHHHHHHHhhCCCEEEE
Confidence            46899999999999999999999999 99999986432           0 3  677999999999888874  899999


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHH
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (307)
                      +||.........++...+++|+.++.+++++|.+.++ +|||+||..+ |+..   ..+++|+++..+.      +.|+.
T Consensus        67 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v-~~~~---~~~~~E~~~~~~~------~~Y~~  135 (315)
T 2ydy_A           67 CAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYV-FDGT---NPPYREEDIPAPL------NLYGK  135 (315)
T ss_dssp             CC-------------------CHHHHHHHHHHHHHTC-EEEEEEEGGG-SCSS---SCSBCTTSCCCCC------SHHHH
T ss_pred             CCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHH-cCCC---CCCCCCCCCCCCc------CHHHH
Confidence            9997654333456778999999999999999999886 8999999765 4332   3678888876553      68999


Q ss_pred             HHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHH-cCCCCC-CCCcccCcccHHHHHHHHHHhhcC
Q 021819          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLL-QGSKDT-QEYHWLGAVPVKDVAKAQVLLFES  244 (307)
Q Consensus       167 sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~i~~~dva~~~~~~~~~  244 (307)
                      +|..+|.+++.+    +++++++||+.|||+........+..++.... .+.+.. .+++.+++++++|+|++++.++++
T Consensus       136 sK~~~e~~~~~~----~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  211 (315)
T 2ydy_A          136 TKLDGEKAVLEN----NLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEK  211 (315)
T ss_dssp             HHHHHHHHHHHH----CTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh----CCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHHHh
Confidence            999999999754    68899999999999987632123333445555 454432 245788999999999999999875


Q ss_pred             C----CCCceEEecC-CcccHHHHHHHHHHhCCCCC
Q 021819          245 P----AASGRYLCTN-GIYQFGDFAERVSKLFPEFP  275 (307)
Q Consensus       245 ~----~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~  275 (307)
                      +    ..++.|++++ +.+++.|+++.+.+.+ +.+
T Consensus       212 ~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~-g~~  246 (315)
T 2ydy_A          212 RMLDPSIKGTFHWSGNEQMTKYEMACAIADAF-NLP  246 (315)
T ss_dssp             HHTCTTCCEEEECCCSCCBCHHHHHHHHHHHT-TCC
T ss_pred             hccccCCCCeEEEcCCCcccHHHHHHHHHHHh-CCC
Confidence            3    4456788764 6799999999999999 443

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=100.00  E-value=2.6e-34  Score=243.41  Aligned_cols=212  Identities=21%  Similarity=0.256  Sum_probs=177.1

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      ||+|+||||+||||++|++.|+++|+ +|++++|++.....         .++.++.+|++|.+++.++++++|+|||||
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~~---------~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~A   72 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAE-ILRLADLSPLDPAG---------PNEECVQCDLADANAVNAMVAGCDGIVHLG   72 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEE-EEEEEESSCCCCCC---------TTEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCC-EEEEEecCCccccC---------CCCEEEEcCCCCHHHHHHHHcCCCEEEECC
Confidence            57999999999999999999999999 99999997655431         178999999999999999999999999999


Q ss_pred             cCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHH
Q 021819           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (307)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (307)
                      |...    .+++.+.+++|+.++.+++++|++++.++|||+||..++...+.  ..+++|+.+..+.      +.|+.+|
T Consensus        73 g~~~----~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~--~~~~~e~~~~~~~------~~Y~~sK  140 (267)
T 3rft_A           73 GISV----EKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQ--TERLGPDVPARPD------GLYGVSK  140 (267)
T ss_dssp             SCCS----CCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBT--TSCBCTTSCCCCC------SHHHHHH
T ss_pred             CCcC----cCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCC--CCCCCCCCCCCCC------ChHHHHH
Confidence            9843    35678999999999999999999999999999999776543333  3578888766554      6899999


Q ss_pred             HHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCCCCC
Q 021819          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAAS  248 (307)
Q Consensus       169 ~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~~~  248 (307)
                      ..+|.+++.++++++++++++||+.|+|+.....                     ...+|++++|+++++..+++.+...
T Consensus       141 ~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~~~~~---------------------~~~~~~~~~d~a~~~~~~~~~~~~~  199 (267)
T 3rft_A          141 CFGENLARMYFDKFGQETALVRIGSCTPEPNNYR---------------------MLSTWFSHDDFVSLIEAVFRAPVLG  199 (267)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECBCSSSCCSTT---------------------HHHHBCCHHHHHHHHHHHHHCSCCC
T ss_pred             HHHHHHHHHHHHHhCCeEEEEEeecccCCCCCCC---------------------ceeeEEcHHHHHHHHHHHHhCCCCC
Confidence            9999999999988999999999999998743321                     3456899999999999999988765


Q ss_pred             c-e-EEecCCcccHHHH
Q 021819          249 G-R-YLCTNGIYQFGDF  263 (307)
Q Consensus       249 g-~-~~~~~~~~~~~~~  263 (307)
                      + . |+++++..++.++
T Consensus       200 ~~~~~~~s~~~~~~~~~  216 (267)
T 3rft_A          200 CPVVWGASANDAGWWDN  216 (267)
T ss_dssp             SCEEEECCCCTTCCBCC
T ss_pred             ceEEEEeCCCCCCcccC
Confidence            4 3 5666666555544

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=100.00  E-value=4.1e-34  Score=254.37  Aligned_cols=253  Identities=15%  Similarity=0.119  Sum_probs=193.9

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC--cccccCCCC---CCC-ceEEEEcccCChhHHHHHhcC--c
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGA---GDA-NLRVFEADVLDSGAVSRAVEG--C   81 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~~~~~~~~~---~~~-~~~~i~~D~~d~~~~~~~~~~--~   81 (307)
                      |+|+|||||||||++|++.|+++|+ +|++++|+....  ..+..+...   ... ++.++.+|++|.+++.+++++  +
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~  107 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP  107 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCC
Confidence            6999999999999999999999999 999999976541  111111110   011 578899999999999999885  6


Q ss_pred             cEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc-----EEEEecCcceeccCCCCCCcccccCCCCchhh
Q 021819           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-----RVVVTSSISAIVPNPGWKGKVFDETSWTDLEY  156 (307)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~  156 (307)
                      |+|||+||........+++...+++|+.++.+++++|.+.+++     +|||+||.++ |+...  . +++|+++..+. 
T Consensus       108 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~v-yg~~~--~-~~~E~~~~~~~-  182 (381)
T 1n7h_A          108 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEM-FGSTP--P-PQSETTPFHPR-  182 (381)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGG-GTTSC--S-SBCTTSCCCCC-
T ss_pred             CEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHH-hCCCC--C-CCCCCCCCCCC-
Confidence            9999999975432112345788999999999999999887655     9999999654 54333  2 78888766553 


Q ss_pred             hcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCC--cchHHHHHHHHcCCCCC--C--CCcccCccc
Q 021819          157 CKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKDT--Q--EYHWLGAVP  230 (307)
Q Consensus       157 ~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~--~--~~~~~~~i~  230 (307)
                           +.|+.+|..+|.+++.++.+++++++++|++++|||+.....  ..+..++.....+....  .  +...++|++
T Consensus       183 -----~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~  257 (381)
T 1n7h_A          183 -----SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGF  257 (381)
T ss_dssp             -----SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEE
T ss_pred             -----CchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEE
Confidence                 689999999999999998888999999999999999864321  12334455555554322  2  347889999


Q ss_pred             HHHHHHHHHHhhcCCCCCceEEec-CCcccHHHHHHHHHHhCCCCC
Q 021819          231 VKDVAKAQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFP  275 (307)
Q Consensus       231 ~~dva~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~  275 (307)
                      ++|+|++++.+++++. .+.|+++ ++.+++.|+++.+.+.+ +.+
T Consensus       258 v~Dva~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~-g~~  301 (381)
T 1n7h_A          258 AGDYVEAMWLMLQQEK-PDDYVVATEEGHTVEEFLDVSFGYL-GLN  301 (381)
T ss_dssp             HHHHHHHHHHHHTSSS-CCEEEECCSCEEEHHHHHHHHHHHT-TCC
T ss_pred             HHHHHHHHHHHHhCCC-CCeEEeeCCCCCcHHHHHHHHHHHc-CCC
Confidence            9999999999998765 3778765 46799999999999999 443

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=100.00  E-value=4.4e-34  Score=270.79  Aligned_cols=256  Identities=18%  Similarity=0.270  Sum_probs=198.5

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHC-CCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhH-HHHHhcCccEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA-VSRAVEGCKGV   84 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~-~~~~~~~~d~v   84 (307)
                      .++|+|+|||||||||++|+++|+++ |+ +|++++|+......+..    . .+++++.+|++|.++ +.++++++|+|
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~-~V~~~~r~~~~~~~~~~----~-~~v~~v~~Dl~d~~~~~~~~~~~~D~V  386 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHY-EVYGLDIGSDAISRFLN----H-PHFHFVEGDISIHSEWIEYHVKKCDVV  386 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSE-EEEEEESCCTTTGGGTT----C-TTEEEEECCTTTCHHHHHHHHHHCSEE
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCC-EEEEEEcCchhhhhhcc----C-CceEEEECCCCCcHHHHHHhhcCCCEE
Confidence            35789999999999999999999998 78 99999997655433211    1 178999999999765 77788899999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhh-cccCcc
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC-KSRKKW  163 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~-~~~~~~  163 (307)
                      ||+||.........++.+.+++|+.++.+++++|.+.+ ++|||+||.++ |+...  ..+++|+++.....+ ..+.+.
T Consensus       387 ih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~v-yg~~~--~~~~~E~~~~~~~~p~~~p~~~  462 (660)
T 1z7e_A          387 LPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEV-YGMCS--DKYFDEDHSNLIVGPVNKPRWI  462 (660)
T ss_dssp             EECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGG-GBTCC--SSSBCTTTCCEEECCTTCTTHH
T ss_pred             EECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHH-cCCCC--CcccCCCccccccCcccCCCCC
Confidence            99999754321223456789999999999999999998 89999999664 54333  256788875321110 112357


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCC-------CCcchHHHHHHHHcCCCCCC---CCcccCcccHHH
Q 021819          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQP-------YLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKD  233 (307)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~-------~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~d  233 (307)
                      |+.+|.++|.+++.++++.+++++++||++|||+....       ....+..++.....+.+...   +++.++|+|++|
T Consensus       463 Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~D  542 (660)
T 1z7e_A          463 YSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRD  542 (660)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHH
T ss_pred             cHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHH
Confidence            99999999999999888889999999999999998643       12345667777777776543   347889999999


Q ss_pred             HHHHHHHhhcCCC---CCceEEecCC--cccHHHHHHHHHHhCC
Q 021819          234 VAKAQVLLFESPA---ASGRYLCTNG--IYQFGDFAERVSKLFP  272 (307)
Q Consensus       234 va~~~~~~~~~~~---~~g~~~~~~~--~~~~~~~~~~~~~~~~  272 (307)
                      +|++++.+++++.   .++.|+++++  .+++.|+++.+.+.++
T Consensus       543 va~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g  586 (660)
T 1z7e_A          543 GIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFE  586 (660)
T ss_dssp             HHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhc
Confidence            9999999998764   3346887754  6999999999998873

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=9.2e-34  Score=248.07  Aligned_cols=258  Identities=19%  Similarity=0.174  Sum_probs=186.9

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC-cccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEEEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~vi~   86 (307)
                      |+|+|||||||||++|+++|+++|+ +|++++|..... ..+..+......++.++.+|++|++++.++++  ++|+|||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih   79 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGH-DVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIH   79 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEE
Confidence            3799999999999999999999999 899988743221 11111000000157889999999999998887  5999999


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHH
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (307)
                      +||........+.+.+.+++|+.++.+++++|++.++++|||+||.+ +|+...  ..+++|+++..+.     .+.|+.
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~-~~g~~~--~~~~~e~~~~~~~-----~~~Y~~  151 (338)
T 1udb_A           80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSAT-VYGDNP--KIPYVESFPTGTP-----QSPYGK  151 (338)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGG-GGCSCC--SSSBCTTSCCCCC-----SSHHHH
T ss_pred             CCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHH-HhCCCC--CCCcCcccCCCCC-----CChHHH
Confidence            99975421112234678899999999999999998889999999965 454333  3577887765331     267999


Q ss_pred             HHHHHHHHHHHHHHhc-CCcEEEEecCceeCCCCCCC--------CcchHHHHHHHHcC--CCCC---------CCCccc
Q 021819          167 SKTLAEKAAWEFAEKH-GVDVVAIHPATCLGPLMQPY--------LNASCAVLQQLLQG--SKDT---------QEYHWL  226 (307)
Q Consensus       167 sK~~~e~~~~~~~~~~-~i~~~ivrp~~v~g~~~~~~--------~~~~~~~~~~~~~~--~~~~---------~~~~~~  226 (307)
                      +|.++|.+++.++++. +++++++||+++||+.....        ...+...+.+...+  ....         .+.+.+
T Consensus       152 sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~  231 (338)
T 1udb_A          152 SKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVR  231 (338)
T ss_dssp             HHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEE
T ss_pred             HHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceee
Confidence            9999999999988776 89999999999999853110        12222333333322  2111         134678


Q ss_pred             CcccHHHHHHHHHHhhcCC--CCC-ceEEec-CCcccHHHHHHHHHHhCCCCCCC
Q 021819          227 GAVPVKDVAKAQVLLFESP--AAS-GRYLCT-NGIYQFGDFAERVSKLFPEFPVH  277 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~--~~~-g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  277 (307)
                      +|+|++|+|++++.+++.+  ... +.|+++ ++++++.|+++.+.+.+ +.+.+
T Consensus       232 ~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~-g~~~~  285 (338)
T 1udb_A          232 DYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKAC-GKPVN  285 (338)
T ss_dssp             CEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHH-TSCCC
T ss_pred             eeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHh-CCCCc
Confidence            9999999999999998753  222 468875 56799999999999988 44443

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=100.00  E-value=3.8e-34  Score=258.27  Aligned_cols=256  Identities=19%  Similarity=0.164  Sum_probs=192.7

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCC------------CCCCCceEEEEcccCCh
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP------------GAGDANLRVFEADVLDS   71 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~------------~~~~~~~~~i~~D~~d~   71 (307)
                      |....+|+|+|||||||||++|+++|+++|+ +|++++|+.........+.            .....++.++.+|++|+
T Consensus        64 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~  142 (427)
T 4f6c_A           64 LSHRPLGNTLLTGATGFLGAYLIEALQGYSH-RIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECM  142 (427)
T ss_dssp             SCCCCCEEEEEECTTSHHHHHHHHHHTTTEE-EEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---
T ss_pred             CCCCCCCEEEEecCCcHHHHHHHHHHHcCCC-EEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCc
Confidence            3345678999999999999999999998999 9999999876221111000            00011789999999998


Q ss_pred             hHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccC--CCCCCcccccC
Q 021819           72 GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPN--PGWKGKVFDET  149 (307)
Q Consensus        72 ~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~--~~~~~~~~~E~  149 (307)
                      +++. .+.++|+||||||....   ..++...+++|+.++.+++++|.+ ++++|||+||..+ +..  ......+++|+
T Consensus       143 ~~l~-~~~~~d~Vih~A~~~~~---~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~  216 (427)
T 4f6c_A          143 DDVV-LPENMDTIIHAGARTDH---FGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEA  216 (427)
T ss_dssp             CCCC-CSSCCSEEEECCCCC----------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG-GSEECSSCSCCEECTT
T ss_pred             ccCC-CcCCCCEEEECCcccCC---CCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh-CCCccCCCCCcccccc
Confidence            8887 77899999999998653   345678999999999999999999 7789999999776 221  11134688898


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCC------cchHHHHHHHHcCCCCCC--
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL------NASCAVLQQLLQGSKDTQ--  221 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~------~~~~~~~~~~~~~~~~~~--  221 (307)
                      ++..+.   ...+.|+.+|.++|.+++.+++ .|++++++||+.|||+......      ..+..++.....+.+...  
T Consensus       217 ~~~~~~---~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (427)
T 4f6c_A          217 DVYKGQ---LLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSM  292 (427)
T ss_dssp             CSCSSC---CCCSHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHH
T ss_pred             ccccCC---CCCCchHHHHHHHHHHHHHHHH-cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCcc
Confidence            874321   1337899999999999998754 6999999999999999876531      235567777777666554  


Q ss_pred             CCcccCcccHHHHHHHHHHhhcCCCCCceEEec-CCcccHHHHHHHHHHhC
Q 021819          222 EYHWLGAVPVKDVAKAQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLF  271 (307)
Q Consensus       222 ~~~~~~~i~~~dva~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~  271 (307)
                      ++..++|++++|+|++++.++..+..++.|+++ ++++++.|+++.+.+ +
T Consensus       293 ~~~~~~~v~v~DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~-~  342 (427)
T 4f6c_A          293 AEMPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR-K  342 (427)
T ss_dssp             HTCEECCEEHHHHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS-S
T ss_pred             ccceEEEeeHHHHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH-c
Confidence            468899999999999999999987755678875 567999999999998 5

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=100.00  E-value=3.2e-34  Score=238.51  Aligned_cols=217  Identities=19%  Similarity=0.232  Sum_probs=171.0

Q ss_pred             cccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCce-EEEEcccCChhHHHHHhcCccE
Q 021819            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANL-RVFEADVLDSGAVSRAVEGCKG   83 (307)
Q Consensus         5 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~i~~D~~d~~~~~~~~~~~d~   83 (307)
                      ..+++|+|+||||||+||++|+++|+++|+ +|++++|+++....+...      ++ +++.+|++  +++.+.+.++|+
T Consensus        17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~------~~~~~~~~Dl~--~~~~~~~~~~D~   87 (236)
T 3e8x_A           17 LYFQGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRER------GASDIVVANLE--EDFSHAFASIDA   87 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHT------TCSEEEECCTT--SCCGGGGTTCSE
T ss_pred             cCcCCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHhC------CCceEEEcccH--HHHHHHHcCCCE
Confidence            345688999999999999999999999999 999999987665544432      68 89999998  678888899999


Q ss_pred             EEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCcc
Q 021819           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (307)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (307)
                      |||+||....    .++...+++|+.++.+++++|++.++++||++||.++..+          |..+ .+      ...
T Consensus        88 vi~~ag~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~----------~~~~-~~------~~~  146 (236)
T 3e8x_A           88 VVFAAGSGPH----TGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP----------DQGP-MN------MRH  146 (236)
T ss_dssp             EEECCCCCTT----SCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG----------GGSC-GG------GHH
T ss_pred             EEECCCCCCC----CCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC----------CCCh-hh------hhh
Confidence            9999997543    5678899999999999999999999999999999543211          1111 11      257


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhc
Q 021819          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE  243 (307)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~  243 (307)
                      |+.+|.++|.+++    ..+++++++||+.++|+.........             ......+++++++|+|++++.+++
T Consensus       147 Y~~sK~~~e~~~~----~~gi~~~~lrpg~v~~~~~~~~~~~~-------------~~~~~~~~~i~~~Dva~~~~~~~~  209 (236)
T 3e8x_A          147 YLVAKRLADDELK----RSSLDYTIVRPGPLSNEESTGKVTVS-------------PHFSEITRSITRHDVAKVIAELVD  209 (236)
T ss_dssp             HHHHHHHHHHHHH----HSSSEEEEEEECSEECSCCCSEEEEE-------------SSCSCCCCCEEHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHH----HCCCCEEEEeCCcccCCCCCCeEEec-------------cCCCcccCcEeHHHHHHHHHHHhc
Confidence            9999999999886    67999999999999998654321110             112246889999999999999999


Q ss_pred             CCCCCc-eEEecCCcccHHHHHHHHH
Q 021819          244 SPAASG-RYLCTNGIYQFGDFAERVS  268 (307)
Q Consensus       244 ~~~~~g-~~~~~~~~~~~~~~~~~~~  268 (307)
                      ++...| .|++.++..++.|+++.+.
T Consensus       210 ~~~~~g~~~~v~~~~~~~~e~~~~i~  235 (236)
T 3e8x_A          210 QQHTIGKTFEVLNGDTPIAKVVEQLG  235 (236)
T ss_dssp             CGGGTTEEEEEEECSEEHHHHHHTC-
T ss_pred             CccccCCeEEEeCCCcCHHHHHHHhc
Confidence            876555 6887766799999988764

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=100.00  E-value=4.5e-34  Score=245.02  Aligned_cols=226  Identities=18%  Similarity=0.157  Sum_probs=182.0

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVF   85 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~vi   85 (307)
                      ..++|+|||||||||++|++.|+++|+ +|++++|+                     .+|++|.+++.++++  ++|+||
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~---------------------~~Dl~d~~~~~~~~~~~~~d~vi   68 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNV-EVIPTDVQ---------------------DLDITNVLAVNKFFNEKKPNVVI   68 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSE-EEEEECTT---------------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCC-eEEeccCc---------------------cCCCCCHHHHHHHHHhcCCCEEE
Confidence            357999999999999999999999999 99999885                     179999999999998  799999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHH
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (307)
                      |+||.........++...+++|+.++.+++++|++.++ +|||+||.+. |+...  ..+++|+++..+.      +.|+
T Consensus        69 h~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v-~~~~~--~~~~~E~~~~~~~------~~Y~  138 (292)
T 1vl0_A           69 NCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYV-FDGEA--KEPITEFDEVNPQ------SAYG  138 (292)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGG-SCSCC--SSCBCTTSCCCCC------SHHH
T ss_pred             ECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHe-ECCCC--CCCCCCCCCCCCc------cHHH
Confidence            99997543112234678899999999999999999887 9999999664 44322  2578888876553      6899


Q ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCC-CCCcccCcccHHHHHHHHHHhhcC
Q 021819          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEYHWLGAVPVKDVAKAQVLLFES  244 (307)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~dva~~~~~~~~~  244 (307)
                      .+|..+|.+++.+    +.+++++||+.|||+ ..   .....++.....+.+.. .+++.+++++++|+|++++.++++
T Consensus       139 ~sK~~~E~~~~~~----~~~~~~lR~~~v~G~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  210 (292)
T 1vl0_A          139 KTKLEGENFVKAL----NPKYYIVRTAWLYGD-GN---NFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDE  210 (292)
T ss_dssp             HHHHHHHHHHHHH----CSSEEEEEECSEESS-SS---CHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhh----CCCeEEEeeeeeeCC-Cc---ChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHHhc
Confidence            9999999999754    468999999999999 32   34455556666665543 355778999999999999999987


Q ss_pred             CCCCceEEecC-CcccHHHHHHHHHHhCCCCC
Q 021819          245 PAASGRYLCTN-GIYQFGDFAERVSKLFPEFP  275 (307)
Q Consensus       245 ~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~  275 (307)
                      + .++.|++++ +.+++.|+++.+.+.+ +.+
T Consensus       211 ~-~~~~~~i~~~~~~s~~e~~~~i~~~~-g~~  240 (292)
T 1vl0_A          211 K-NYGTFHCTCKGICSWYDFAVEIFRLT-GID  240 (292)
T ss_dssp             T-CCEEEECCCBSCEEHHHHHHHHHHHH-CCC
T ss_pred             C-CCcEEEecCCCCccHHHHHHHHHHHh-CCC
Confidence            6 556788765 6799999999999998 444

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=100.00  E-value=4.1e-34  Score=246.07  Aligned_cols=226  Identities=16%  Similarity=0.113  Sum_probs=183.1

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcC--ccEEEEe
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGVFHV   87 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~--~d~vi~~   87 (307)
                      |+|+|||||||||++|+++|+ +|+ +|++++|+..                 .+.+|++|++++.+++++  +|+|||+
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~-~V~~~~r~~~-----------------~~~~D~~d~~~~~~~~~~~~~d~vih~   61 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVG-NLIALDVHSK-----------------EFCGDFSNPKGVAETVRKLRPDVIVNA   61 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTS-EEEEECTTCS-----------------SSCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCC-eEEEeccccc-----------------cccccCCCHHHHHHHHHhcCCCEEEEC
Confidence            379999999999999999999 898 9999998651                 235899999999999986  9999999


Q ss_pred             ccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHH
Q 021819           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (307)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (307)
                      |+.........++...+++|+.++.+++++|++.++ +|||+||.+. |+...  ..+++|+++..|.      +.|+.+
T Consensus        62 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v-y~~~~--~~~~~E~~~~~p~------~~Y~~s  131 (299)
T 1n2s_A           62 AAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYV-FPGTG--DIPWQETDATSPL------NVYGKT  131 (299)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGG-SCCCT--TCCBCTTSCCCCS------SHHHHH
T ss_pred             cccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccE-EeCCC--CCCCCCCCCCCCc------cHHHHH
Confidence            997553222355678899999999999999999887 8999999654 44333  2578888876654      689999


Q ss_pred             HHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCC-CCCcccCcccHHHHHHHHHHhhcCC-
Q 021819          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEYHWLGAVPVKDVAKAQVLLFESP-  245 (307)
Q Consensus       168 K~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~dva~~~~~~~~~~-  245 (307)
                      |.++|.+++.+    ..+++++||+.+||+...   .....++.....+.+.. .+++.++++|++|+|++++.+++++ 
T Consensus       132 K~~~E~~~~~~----~~~~~ilRp~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  204 (299)
T 1n2s_A          132 KLAGEKALQDN----CPKHLIFRTSWVYAGKGN---NFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVAL  204 (299)
T ss_dssp             HHHHHHHHHHH----CSSEEEEEECSEECSSSC---CHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHh----CCCeEEEeeeeecCCCcC---cHHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHHhc
Confidence            99999999754    459999999999999754   34555666666666543 3557899999999999999999876 


Q ss_pred             -C--CCceEEecC-CcccHHHHHHHHHHhC
Q 021819          246 -A--ASGRYLCTN-GIYQFGDFAERVSKLF  271 (307)
Q Consensus       246 -~--~~g~~~~~~-~~~~~~~~~~~~~~~~  271 (307)
                       .  ..+.|++++ +.+++.|+++.+.+.+
T Consensus       205 ~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~  234 (299)
T 1n2s_A          205 NKPEVAGLYHLVAGGTTTWHDYAALVFDEA  234 (299)
T ss_dssp             HCGGGCEEEECCCBSCEEHHHHHHHHHHHH
T ss_pred             cccccCceEEEeCCCCCCHHHHHHHHHHHh
Confidence             3  256788765 6799999999999887

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=100.00  E-value=3.4e-33  Score=240.29  Aligned_cols=242  Identities=16%  Similarity=0.107  Sum_probs=179.3

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEecc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a~   89 (307)
                      |||||||||||||++|+++|+++|+ +|+++.|++...            .+   ..|    +...+.++++|+|||+|+
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~-~V~~l~R~~~~~------------~~---~~~----~~~~~~l~~~d~vihla~   60 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGH-EVTLVSRKPGPG------------RI---TWD----ELAASGLPSCDAAVNLAG   60 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCTT------------EE---EHH----HHHHHCCCSCSEEEECCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCcC------------ee---ecc----hhhHhhccCCCEEEEecc
Confidence            4899999999999999999999999 999999975432            11   222    233456789999999998


Q ss_pred             CCCCCC---C-CChhhhhhhhhHHHHHHHHHHHHhcCC--cEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCcc
Q 021819           90 PCTLED---P-VDPEKELILPAVQGTLNVLEAAKRFGV--RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (307)
Q Consensus        90 ~~~~~~---~-~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (307)
                      ......   + .......++.|+.+|.++++++++.+.  ..+|+.||++ +|+...  +.+.+|+++..+.      ..
T Consensus        61 ~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~-vyg~~~--~~~~~E~~p~~~~------~~  131 (298)
T 4b4o_A           61 ENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVA-YYQPSL--TAEYDEDSPGGDF------DF  131 (298)
T ss_dssp             CCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGG-GSCCCS--SCCBCTTCCCSCS------SH
T ss_pred             CcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeee-eecCCC--CCcccccCCcccc------ch
Confidence            543221   1 122357788999999999999988764  4588888744 565444  3678888876654      46


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC--CCcccCcccHHHHHHHHHHh
Q 021819          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ--EYHWLGAVPVKDVAKAQVLL  241 (307)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~dva~~~~~~  241 (307)
                      |+..+...|...  +....+++++++||+.||||..    ..+..++.....+....+  +++.++|||++|+|+++.++
T Consensus       132 ~~~~~~~~e~~~--~~~~~~~~~~~~r~~~v~g~~~----~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~  205 (298)
T 4b4o_A          132 FSNLVTKWEAAA--RLPGDSTRQVVVRSGVVLGRGG----GAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHA  205 (298)
T ss_dssp             HHHHHHHHHHHH--CCSSSSSEEEEEEECEEECTTS----HHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHH--HhhccCCceeeeeeeeEEcCCC----CchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHH
Confidence            777777666543  2235689999999999999974    233444544555544443  55899999999999999999


Q ss_pred             hcCCCCCceEEec-CCcccHHHHHHHHHHhCCCCCCCccccCCchHH
Q 021819          242 FESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFPVHRFVFQSPLRF  287 (307)
Q Consensus       242 ~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (307)
                      ++++...|.||++ ++++|+.|+++.+.+.+ +.+...+.|.++.++
T Consensus       206 ~~~~~~~g~yn~~~~~~~t~~e~~~~ia~~l-grp~~~pvP~~~~~~  251 (298)
T 4b4o_A          206 LEANHVHGVLNGVAPSSATNAEFAQTFGAAL-GRRAFIPLPSAVVQA  251 (298)
T ss_dssp             HHCTTCCEEEEESCSCCCBHHHHHHHHHHHH-TCCCCCCBCHHHHHH
T ss_pred             HhCCCCCCeEEEECCCccCHHHHHHHHHHHh-CcCCcccCCHHHHHH
Confidence            9999888999875 57799999999999999 666555566555443

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=100.00  E-value=1.4e-33  Score=241.32  Aligned_cols=222  Identities=15%  Similarity=0.122  Sum_probs=177.2

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      ||+|+|||| ||||++|+++|+++|+ +|++++|++.....+...      +++++.+|++|.+     +.++|+|||+|
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~------~~~~~~~D~~d~~-----~~~~d~vi~~a   71 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRAS------GAEPLLWPGEEPS-----LDGVTHLLIST   71 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHHT------TEEEEESSSSCCC-----CTTCCEEEECC
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhhC------CCeEEEecccccc-----cCCCCEEEECC
Confidence            569999998 9999999999999999 999999987655444332      7899999999954     78999999999


Q ss_pred             cCCCCCCCCChhhhhhhhhHHHHHHHHHHHHh--cCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHH
Q 021819           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKR--FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (307)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (307)
                      +.....   +          ..+.+++++|++  .++++|||+||.+ +|+...  ..+++|+++..|.      +.|+.
T Consensus        72 ~~~~~~---~----------~~~~~l~~a~~~~~~~~~~~v~~Ss~~-vyg~~~--~~~~~E~~~~~p~------~~Y~~  129 (286)
T 3ius_A           72 APDSGG---D----------PVLAALGDQIAARAAQFRWVGYLSTTA-VYGDHD--GAWVDETTPLTPT------AARGR  129 (286)
T ss_dssp             CCBTTB---C----------HHHHHHHHHHHHTGGGCSEEEEEEEGG-GGCCCT--TCEECTTSCCCCC------SHHHH
T ss_pred             Cccccc---c----------HHHHHHHHHHHhhcCCceEEEEeecce-ecCCCC--CCCcCCCCCCCCC------CHHHH
Confidence            875431   1          135789999988  6789999999965 555443  3688999877665      68999


Q ss_pred             HHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC--CCcccCcccHHHHHHHHHHhhcC
Q 021819          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ--EYHWLGAVPVKDVAKAQVLLFES  244 (307)
Q Consensus       167 sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~dva~~~~~~~~~  244 (307)
                      +|.++|.+++.+   .+++++++||+.+||+......        .+..+....+  +++.++++|++|+|++++.++++
T Consensus       130 sK~~~E~~~~~~---~~~~~~ilRp~~v~G~~~~~~~--------~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  198 (286)
T 3ius_A          130 WRVMAEQQWQAV---PNLPLHVFRLAGIYGPGRGPFS--------KLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMAR  198 (286)
T ss_dssp             HHHHHHHHHHHS---TTCCEEEEEECEEEBTTBSSST--------TSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhh---cCCCEEEEeccceECCCchHHH--------HHhcCCccccCCCCcccceEEHHHHHHHHHHHHhC
Confidence            999999999854   5999999999999999865421        2233443333  34788999999999999999999


Q ss_pred             CCCCceEEec-CCcccHHHHHHHHHHhCCCCCCC
Q 021819          245 PAASGRYLCT-NGIYQFGDFAERVSKLFPEFPVH  277 (307)
Q Consensus       245 ~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  277 (307)
                      +..++.|+++ ++.+++.|+++.+.+.+ +.+.+
T Consensus       199 ~~~g~~~~i~~~~~~s~~e~~~~i~~~~-g~~~~  231 (286)
T 3ius_A          199 PDPGAVYNVCDDEPVPPQDVIAYAAELQ-GLPLP  231 (286)
T ss_dssp             CCTTCEEEECCSCCBCHHHHHHHHHHHH-TCCCC
T ss_pred             CCCCCEEEEeCCCCccHHHHHHHHHHHc-CCCCC
Confidence            8866688876 56799999999999999 55544

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=100.00  E-value=2.3e-33  Score=230.66  Aligned_cols=210  Identities=18%  Similarity=0.234  Sum_probs=170.4

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCC-hhHHHHHhcCccEEEEec
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD-SGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d-~~~~~~~~~~~d~vi~~a   88 (307)
                      |+|+|||||||||+++++.|+++|+ +|++++|++......        .+++++.+|++| ++++.++++++|+|||+|
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~--------~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~a   71 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY--------NNVKAVHFDVDWTPEEMAKQLHGMDAIINVS   71 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC--------TTEEEEECCTTSCHHHHHTTTTTCSEEEECC
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc--------CCceEEEecccCCHHHHHHHHcCCCEEEECC
Confidence            3899999999999999999999999 999999986554332        179999999999 999999999999999999


Q ss_pred             cCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHH
Q 021819           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (307)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (307)
                      |....        ..+++|+.++.+++++|++.++++||++||..+...      .+..| ++.      .+...|+.+|
T Consensus        72 g~~~~--------~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~------~~~~e-~~~------~~~~~Y~~sK  130 (219)
T 3dqp_A           72 GSGGK--------SLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQP------EKWIG-AGF------DALKDYYIAK  130 (219)
T ss_dssp             CCTTS--------SCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCG------GGCCS-HHH------HHTHHHHHHH
T ss_pred             cCCCC--------CcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCC------Ccccc-ccc------ccccHHHHHH
Confidence            97542        378899999999999999999999999999654321      23334 211      2236899999


Q ss_pred             HHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCCCCC
Q 021819          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAAS  248 (307)
Q Consensus       169 ~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~~~  248 (307)
                      .++|++++   +..+++++++||+.+||+.......                .+...+++++++|+|++++.+++++...
T Consensus       131 ~~~e~~~~---~~~~i~~~ilrp~~v~g~~~~~~~~----------------~~~~~~~~i~~~Dva~~i~~~l~~~~~~  191 (219)
T 3dqp_A          131 HFADLYLT---KETNLDYTIIQPGALTEEEATGLID----------------INDEVSASNTIGDVADTIKELVMTDHSI  191 (219)
T ss_dssp             HHHHHHHH---HSCCCEEEEEEECSEECSCCCSEEE----------------ESSSCCCCEEHHHHHHHHHHHHTCGGGT
T ss_pred             HHHHHHHH---hccCCcEEEEeCceEecCCCCCccc----------------cCCCcCCcccHHHHHHHHHHHHhCcccc
Confidence            99999985   3679999999999999986543311                1246789999999999999999987765


Q ss_pred             c-eEEecCCcccHHHHHHHHH
Q 021819          249 G-RYLCTNGIYQFGDFAERVS  268 (307)
Q Consensus       249 g-~~~~~~~~~~~~~~~~~~~  268 (307)
                      | .|++.++..++.|+.+.-.
T Consensus       192 g~~~~i~~g~~~~~e~~~~~~  212 (219)
T 3dqp_A          192 GKVISMHNGKTAIKEALESLL  212 (219)
T ss_dssp             TEEEEEEECSEEHHHHHHTTT
T ss_pred             CcEEEeCCCCccHHHHHHHHH
Confidence            5 6888777799988766543

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=100.00  E-value=4.6e-33  Score=256.38  Aligned_cols=253  Identities=19%  Similarity=0.165  Sum_probs=191.8

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccC------------CCCCCCceEEEEcccCChhHHH
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL------------PGAGDANLRVFEADVLDSGAVS   75 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~------------~~~~~~~~~~i~~D~~d~~~~~   75 (307)
                      .+|+|+|||||||||++|+++|+++|+ +|++++|+.........+            ......+++++.+|++|++.+.
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSH-RIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEE-EEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCC-EEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC
Confidence            468999999999999999999988899 999999977632111000            0000117999999999987777


Q ss_pred             HHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccC--CCCCCcccccCCCCc
Q 021819           76 RAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPN--PGWKGKVFDETSWTD  153 (307)
Q Consensus        76 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~--~~~~~~~~~E~~~~~  153 (307)
                       +..++|+|||||+....   ..++...+++|+.++.+++++|.+ +.++|||+||.++ +..  ......+++|+++..
T Consensus       228 -~~~~~D~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~  301 (508)
T 4f6l_B          228 -LPENMDTIIHAGARTDH---FGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYK  301 (508)
T ss_dssp             -CSSCCSEEEECCCC-----------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCT-TSEECTTCSCCEECTTCSCS
T ss_pred             -CccCCCEEEECCceecC---CCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhh-ccCCccCCcCcccccccccc
Confidence             77899999999997643   345678899999999999999998 6689999999775 211  111246888988743


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC------CcchHHHHHHHHcCCCCCC--CCcc
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY------LNASCAVLQQLLQGSKDTQ--EYHW  225 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~------~~~~~~~~~~~~~~~~~~~--~~~~  225 (307)
                      +.   ...+.|+.+|+.+|.+++.+++ .|++++++||+.|||+...+.      ...+..++...........  +++.
T Consensus       302 ~~---~~~~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~  377 (508)
T 4f6l_B          302 GQ---LLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMP  377 (508)
T ss_dssp             SB---CCCSHHHHHHHHHHHHHHHHHH-TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSE
T ss_pred             cc---cCCCcHHHHHHHHHHHHHHHHH-cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCce
Confidence            21   1337899999999999998754 699999999999999987654      1235566777666655444  4688


Q ss_pred             cCcccHHHHHHHHHHhhcCCCCCceEEecC-CcccHHHHHHHHHHhC
Q 021819          226 LGAVPVKDVAKAQVLLFESPAASGRYLCTN-GIYQFGDFAERVSKLF  271 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~  271 (307)
                      ++|++++|+|++++.++.++..++.|++++ +.+++.|+++.+.+..
T Consensus       378 ~~~v~v~DvA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~  424 (508)
T 4f6l_B          378 VDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE  424 (508)
T ss_dssp             EECEEHHHHHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC
T ss_pred             EEEEcHHHHHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC
Confidence            999999999999999998877656788764 6799999999999765

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=100.00  E-value=4.4e-32  Score=239.64  Aligned_cols=242  Identities=14%  Similarity=0.138  Sum_probs=186.0

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCC-----CCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcC---c
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNN-----YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG---C   81 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g-----~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~---~   81 (307)
                      |+|+|||||||||++|+++|+++|     + +|++++|+..... ..      ..+++++.+|++|++++.+++++   +
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~-~V~~~~r~~~~~~-~~------~~~~~~~~~Dl~d~~~~~~~~~~~~~~   73 (364)
T 2v6g_A            2 SVALIVGVTGIIGNSLAEILPLADTPGGPW-KVYGVARRTRPAW-HE------DNPINYVQCDISDPDDSQAKLSPLTDV   73 (364)
T ss_dssp             EEEEEETTTSHHHHHHHHHTTSTTCTTCSE-EEEEEESSCCCSC-CC------SSCCEEEECCTTSHHHHHHHHTTCTTC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCCce-EEEEEeCCCCccc-cc------cCceEEEEeecCCHHHHHHHHhcCCCC
Confidence            689999999999999999999999     8 9999999765543 11      11788999999999999999988   9


Q ss_pred             cEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEE-------EecCcceeccCCCCCCcccccCCCC
Q 021819           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVV-------VTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v-------~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      |+|||+|+...     .+....+++|+.++.+++++|++.  ++++||       |+||.+ +|+.......+++|+++.
T Consensus        74 d~vih~a~~~~-----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~-vyg~~~~~~~~~~E~~~~  147 (364)
T 2v6g_A           74 THVFYVTWANR-----STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFE-SYGKIESHDPPYTEDLPR  147 (364)
T ss_dssp             CEEEECCCCCC-----SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGG-GTTTSCCCCSSBCTTSCC
T ss_pred             CEEEECCCCCc-----chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechh-hccccccCCCCCCccccC
Confidence            99999999753     346789999999999999999998  789998       788855 454432123578888765


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHhcC-CcEEEEecCceeCCCCCCCCcc-hHH-HHHHH--HcCCCCCC-CC---
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG-VDVVAIHPATCLGPLMQPYLNA-SCA-VLQQL--LQGSKDTQ-EY---  223 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~-i~~~ivrp~~v~g~~~~~~~~~-~~~-~~~~~--~~~~~~~~-~~---  223 (307)
                      .+.     .+.|    ..+|.+++.+++.++ ++++++||+.|||+........ ... ++...  ..+.+..+ ++   
T Consensus       148 ~~~-----~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~  218 (364)
T 2v6g_A          148 LKY-----MNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAA  218 (364)
T ss_dssp             CSS-----CCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHH
T ss_pred             Ccc-----chhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCccc
Confidence            542     1456    357888888776676 9999999999999987643232 222 23333  25655443 22   


Q ss_pred             --cccCcccHHHHHHHHHHhhcCCCCCc-eEEecC-CcccHHHHHHHHHHhCCCCC
Q 021819          224 --HWLGAVPVKDVAKAQVLLFESPAASG-RYLCTN-GIYQFGDFAERVSKLFPEFP  275 (307)
Q Consensus       224 --~~~~~i~~~dva~~~~~~~~~~~~~g-~~~~~~-~~~~~~~~~~~~~~~~~~~~  275 (307)
                        ...++++++|+|++++.+++++...| .|++++ +.+++.|+++.+.+.+ +.+
T Consensus       219 ~~~~~~~~~v~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~-g~~  273 (364)
T 2v6g_A          219 WDGYSDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQF-GVE  273 (364)
T ss_dssp             HHSCBCCEEHHHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHH-TCC
T ss_pred             ccccCCCCcHHHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHh-CCC
Confidence              45778889999999999999876445 788765 5799999999999999 444

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=100.00  E-value=3e-33  Score=236.92  Aligned_cols=218  Identities=19%  Similarity=0.249  Sum_probs=175.7

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      ||+|+|||||||||++|+++|+++|+ +|++++|++....  .      . ++.++.+|++|++++.++++++|+|||+|
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~--~------~-~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a   71 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAH-EVRLSDIVDLGAA--E------A-HEEIVACDLADAQAVHDLVKDCDGIIHLG   71 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEE-EEEECCSSCCCCC--C------T-TEEECCCCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCC-EEEEEeCCCcccc--C------C-CccEEEccCCCHHHHHHHHcCCCEEEECC
Confidence            46899999999999999999999998 9999999764321  1      1 67899999999999999999999999999


Q ss_pred             cCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHH
Q 021819           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (307)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (307)
                      +...    ...+...+++|+.++.+++++|.+.++++|||+||..++...+.  ..+++|+++..+.      +.|+.+|
T Consensus        72 ~~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~--~~~~~E~~~~~~~------~~Y~~sK  139 (267)
T 3ay3_A           72 GVSV----ERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPR--TTRIDTEVPRRPD------SLYGLSK  139 (267)
T ss_dssp             SCCS----CCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBT--TSCBCTTSCCCCC------SHHHHHH
T ss_pred             cCCC----CCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCC--CCCCCCCCCCCCC------ChHHHHH
Confidence            9752    34567899999999999999999999999999999765433232  3578888876654      6899999


Q ss_pred             HHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCCCCC
Q 021819          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAAS  248 (307)
Q Consensus       169 ~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~~~  248 (307)
                      ..+|.+++.++++.+++++++||+.+|+....                     +...+++++++|+|++++.+++++...
T Consensus       140 ~~~e~~~~~~~~~~gi~~~~lrp~~v~~~~~~---------------------~~~~~~~~~~~dva~~~~~~~~~~~~~  198 (267)
T 3ay3_A          140 CFGEDLASLYYHKFDIETLNIRIGSCFPKPKD---------------------ARMMATWLSVDDFMRLMKRAFVAPKLG  198 (267)
T ss_dssp             HHHHHHHHHHHHTTCCCEEEEEECBCSSSCCS---------------------HHHHHHBCCHHHHHHHHHHHHHSSCCC
T ss_pred             HHHHHHHHHHHHHcCCCEEEEeceeecCCCCC---------------------CCeeeccccHHHHHHHHHHHHhCCCCC
Confidence            99999999888888999999999999843110                     012467899999999999999987653


Q ss_pred             -ceEEec-CCcccHHHHHHHHHHhC
Q 021819          249 -GRYLCT-NGIYQFGDFAERVSKLF  271 (307)
Q Consensus       249 -g~~~~~-~~~~~~~~~~~~~~~~~  271 (307)
                       +.|++. +...++.++.+.  +.+
T Consensus       199 ~~~~~~~~~~~~~~~d~~~~--~~l  221 (267)
T 3ay3_A          199 CTVVYGASANTESWWDNDKS--AFL  221 (267)
T ss_dssp             EEEEEECCSCSSCCBCCGGG--GGG
T ss_pred             ceeEecCCCccccccCHHHH--HHc
Confidence             456554 455677676666  555

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=100.00  E-value=3.2e-32  Score=259.87  Aligned_cols=263  Identities=16%  Similarity=0.132  Sum_probs=190.9

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCc-ccccCCCCCCCceEEEEcccCChhHHHHHhc--Ccc
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS-HLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCK   82 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d   82 (307)
                      ..++|+|+|||||||||++|+++|+++|+ +|++++|+..... ....+......++.++.+|++|++++.++++  ++|
T Consensus         8 ~~~~~~ilVTGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D   86 (699)
T 1z45_A            8 ESTSKIVLVTGGAGYIGSHTVVELIENGY-DCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKID   86 (699)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCC
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCC
Confidence            45578999999999999999999999999 9999998654321 1111000000167889999999999999998  899


Q ss_pred             EEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCC--CCCcccccCCCCchhhhccc
Q 021819           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPG--WKGKVFDETSWTDLEYCKSR  160 (307)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~--~~~~~~~E~~~~~~~~~~~~  160 (307)
                      +|||+||........+...+.+++|+.++.+++++|++.++++||++||.++ |+...  ....+++|+++..+.     
T Consensus        87 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~v-yg~~~~~~~~~~~~E~~~~~p~-----  160 (699)
T 1z45_A           87 SVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATV-YGDATRFPNMIPIPEECPLGPT-----  160 (699)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGG-GCCGGGSTTCCSBCTTSCCCCC-----
T ss_pred             EEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHH-hCCCccccccCCccccCCCCCC-----
Confidence            9999999754311112345789999999999999999999999999999654 44321  012456777665543     


Q ss_pred             CccHHHHHHHHHHHHHHHHHh--cCCcEEEEecCceeCCCCCCC--------CcchHHHHHHHHcC--CCCC-C------
Q 021819          161 KKWYPVSKTLAEKAAWEFAEK--HGVDVVAIHPATCLGPLMQPY--------LNASCAVLQQLLQG--SKDT-Q------  221 (307)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~--~~i~~~ivrp~~v~g~~~~~~--------~~~~~~~~~~~~~~--~~~~-~------  221 (307)
                       +.|+.+|.++|.+++.++++  .+++++++||+.+||+.....        ...+..++.+...+  .++. .      
T Consensus       161 -~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  239 (699)
T 1z45_A          161 -NPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDS  239 (699)
T ss_dssp             -SHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------
T ss_pred             -ChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccC
Confidence             68999999999999988776  699999999999999864321        12233344444432  2322 2      


Q ss_pred             --CCcccCcccHHHHHHHHHHhhcCC------C-CCceEEec-CCcccHHHHHHHHHHhCCCCCCC
Q 021819          222 --EYHWLGAVPVKDVAKAQVLLFESP------A-ASGRYLCT-NGIYQFGDFAERVSKLFPEFPVH  277 (307)
Q Consensus       222 --~~~~~~~i~~~dva~~~~~~~~~~------~-~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  277 (307)
                        +.+.++|+|++|+|++++.+++..      . ..+.|+++ ++.+++.|+++.+.+.+ +.+.+
T Consensus       240 ~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~-g~~~~  304 (699)
T 1z45_A          240 RDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKAS-GIDLP  304 (699)
T ss_dssp             CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHH-TCCCC
T ss_pred             CCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHh-CCCCC
Confidence              346789999999999999988642      1 12468765 56799999999999988 44433

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=100.00  E-value=1.1e-32  Score=227.39  Aligned_cols=213  Identities=11%  Similarity=0.030  Sum_probs=163.0

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEecc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a~   89 (307)
                      |+|+|||||||||++|+++|+++|+ +|++++|++.....+...      +++++.+|++|+++  +.+.++|+|||+||
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~------~~~~~~~D~~d~~~--~~~~~~d~vi~~ag   71 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQKAADRLGA------TVATLVKEPLVLTE--ADLDSVDAVVDALS   71 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHTCT------TSEEEECCGGGCCH--HHHTTCSEEEECCC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEecccccccccCC------CceEEecccccccH--hhcccCCEEEECCc
Confidence            3799999999999999999999999 999999976554433221      78999999999887  77899999999999


Q ss_pred             CCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHH
Q 021819           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (307)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (307)
                      ....       ......|+.++.+++++|++.+ ++||++||+++++........+.+|+.++.+      .+.|+.+|.
T Consensus        72 ~~~~-------~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~------~~~y~~sK~  137 (224)
T 3h2s_A           72 VPWG-------SGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAAS------QPWYDGALY  137 (224)
T ss_dssp             CCTT-------SSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGG------STTHHHHHH
T ss_pred             cCCC-------cchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCcc------chhhHHHHH
Confidence            8521       1235789999999999999999 9999999987777655432234445443333      268999999


Q ss_pred             HHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCCCCCc
Q 021819          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASG  249 (307)
Q Consensus       170 ~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~~~g  249 (307)
                      .+|.+ +.+.+..+++++++||+.+||+.....  ..       ........+....++++++|+|++++.+++++...|
T Consensus       138 ~~e~~-~~~~~~~~i~~~ivrp~~v~g~~~~~~--~~-------~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g  207 (224)
T 3h2s_A          138 QYYEY-QFLQMNANVNWIGISPSEAFPSGPATS--YV-------AGKDTLLVGEDGQSHITTGNMALAILDQLEHPTAIR  207 (224)
T ss_dssp             HHHHH-HHHTTCTTSCEEEEEECSBCCCCCCCC--EE-------EESSBCCCCTTSCCBCCHHHHHHHHHHHHHSCCCTT
T ss_pred             HHHHH-HHHHhcCCCcEEEEcCccccCCCcccC--ce-------ecccccccCCCCCceEeHHHHHHHHHHHhcCccccC
Confidence            99954 445556799999999999999854322  11       112223334566789999999999999999988765


Q ss_pred             -eEEecC
Q 021819          250 -RYLCTN  255 (307)
Q Consensus       250 -~~~~~~  255 (307)
                       .|++.+
T Consensus       208 ~~~~~~~  214 (224)
T 3h2s_A          208 DRIVVRD  214 (224)
T ss_dssp             SEEEEEE
T ss_pred             CEEEEec
Confidence             587654

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=100.00  E-value=6.5e-32  Score=229.26  Aligned_cols=227  Identities=15%  Similarity=0.147  Sum_probs=178.3

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcC--ccEEEEe
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGVFHV   87 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~--~d~vi~~   87 (307)
                      |+|+|||||||||++|+++|+ +|+ +|++++|++...          . +   +.+|++|++++.+++++  +|+|||+
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~-~V~~~~r~~~~~----------~-~---~~~Dl~~~~~~~~~~~~~~~d~vi~~   64 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLS-ERH-EVIKVYNSSEIQ----------G-G---YKLDLTDFPRLEDFIIKKRPDVIINA   64 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHT-TTS-CEEEEESSSCCT----------T-C---EECCTTSHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCChhHHHHHHHHh-cCC-eEEEecCCCcCC----------C-C---ceeccCCHHHHHHHHHhcCCCEEEEC
Confidence            379999999999999999999 487 899999976321          1 4   78999999999999886  9999999


Q ss_pred             ccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHH
Q 021819           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (307)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (307)
                      ||........+++...+++|+.++.+++++|++.+. +|||+||..++.+. .   .+++|+++..+.      +.|+.+
T Consensus        65 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~-~---~~~~e~~~~~~~------~~Y~~s  133 (273)
T 2ggs_A           65 AAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGE-K---GNYKEEDIPNPI------NYYGLS  133 (273)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSS-S---CSBCTTSCCCCS------SHHHHH
T ss_pred             CcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCC-C---CCcCCCCCCCCC------CHHHHH
Confidence            997543211235678899999999999999999886 89999997654322 1   367888765553      689999


Q ss_pred             HHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC-CCcccCcccHHHHHHHHHHhhcCCC
Q 021819          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ-EYHWLGAVPVKDVAKAQVLLFESPA  246 (307)
Q Consensus       168 K~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~dva~~~~~~~~~~~  246 (307)
                      |.++|.+++     . ++++++||+.|||+     ......++.....+.+... ++ .+++++++|+|++++.+++++.
T Consensus       134 K~~~e~~~~-----~-~~~~~iR~~~v~G~-----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~i~~~~~~~~  201 (273)
T 2ggs_A          134 KLLGETFAL-----Q-DDSLIIRTSGIFRN-----KGFPIYVYKTLKEGKTVFAFKG-YYSPISARKLASAILELLELRK  201 (273)
T ss_dssp             HHHHHHHHC-----C-TTCEEEEECCCBSS-----SSHHHHHHHHHHTTCCEEEESC-EECCCBHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHh-----C-CCeEEEeccccccc-----cHHHHHHHHHHHcCCCEEeecC-CCCceEHHHHHHHHHHHHhcCc
Confidence            999999985     2 88999999999982     1233344455555554332 33 7899999999999999998764


Q ss_pred             CCceEEecCCcccHHHHHHHHHHhCCCCCCC
Q 021819          247 ASGRYLCTNGIYQFGDFAERVSKLFPEFPVH  277 (307)
Q Consensus       247 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (307)
                       .|.|+++++.+++.|+++.+.+.+ +.+.+
T Consensus       202 -~g~~~i~~~~~s~~e~~~~~~~~~-g~~~~  230 (273)
T 2ggs_A          202 -TGIIHVAGERISRFELALKIKEKF-NLPGE  230 (273)
T ss_dssp             -CEEEECCCCCEEHHHHHHHHHHHT-TCCSC
T ss_pred             -CCeEEECCCcccHHHHHHHHHHHh-CCChh
Confidence             568888777799999999999999 55433

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=100.00  E-value=6.1e-32  Score=239.32  Aligned_cols=209  Identities=20%  Similarity=0.185  Sum_probs=176.5

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEecc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a~   89 (307)
                      |+|+|||||||||++|+++|+++|+.+|++++|+                         +|++++.++++++|+|||+|+
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------------~d~~~l~~~~~~~d~Vih~a~   55 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------------TKEEELESALLKADFIVHLAG   55 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------------CCHHHHHHHHHHCSEEEECCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------------CCHHHHHHHhccCCEEEECCc
Confidence            4899999999999999999999987345544332                         688999999999999999999


Q ss_pred             CCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHH
Q 021819           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (307)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (307)
                      ....    +.....+++|+.++.+++++|++.+++ +|||+||..+ ++  .                     +.|+.+|
T Consensus        56 ~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~-~~--~---------------------~~Y~~sK  107 (369)
T 3st7_A           56 VNRP----EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQA-TQ--D---------------------NPYGESK  107 (369)
T ss_dssp             SBCT----TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGG-GS--C---------------------SHHHHHH
T ss_pred             CCCC----CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhh-cC--C---------------------CCchHHH
Confidence            7653    345678899999999999999999987 9999999664 32  1                     6799999


Q ss_pred             HHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC-CcchHHHHHHHHcCCCCCC--CCcccCcccHHHHHHHHHHhhcCC
Q 021819          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY-LNASCAVLQQLLQGSKDTQ--EYHWLGAVPVKDVAKAQVLLFESP  245 (307)
Q Consensus       169 ~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~dva~~~~~~~~~~  245 (307)
                      .++|.+++.++++.+++++++||+++||+..... ...+..++.....+.+..+  ++..++++|++|+|++++.+++++
T Consensus       108 ~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~  187 (369)
T 3st7_A          108 LQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGT  187 (369)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCC
Confidence            9999999999988999999999999999977554 3566777777778777655  457889999999999999999988


Q ss_pred             CC--CceEEecC-CcccHHHHHHHHHHhC
Q 021819          246 AA--SGRYLCTN-GIYQFGDFAERVSKLF  271 (307)
Q Consensus       246 ~~--~g~~~~~~-~~~~~~~~~~~~~~~~  271 (307)
                      ..  ++.|++++ +.+++.|+++.+.+.+
T Consensus       188 ~~~~~~~~~i~~~~~~s~~e~~~~~~~~~  216 (369)
T 3st7_A          188 PTIENGVPTVPNVFKVTLGEIVDLLYKFK  216 (369)
T ss_dssp             CCEETTEECCSCCEEEEHHHHHHHHHHHH
T ss_pred             cccCCceEEeCCCCceeHHHHHHHHHHHh
Confidence            77  56787764 6799999999999988

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.98  E-value=4.7e-32  Score=227.34  Aligned_cols=228  Identities=20%  Similarity=0.149  Sum_probs=169.7

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHC--CCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      +||+|+||||+|+||++|+++|+++  |+ +|++++|++.....+   .    .++.++.+|++|++++.++++++|+||
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~-~V~~~~r~~~~~~~~---~----~~~~~~~~D~~d~~~~~~~~~~~d~vi   74 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGKEKI---G----GEADVFIGDITDADSINPAFQGIDALV   74 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTC-EEEEEESCHHHHHHT---T----CCTTEEECCTTSHHHHHHHHTTCSEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCc-EEEEEEcCCCchhhc---C----CCeeEEEecCCCHHHHHHHHcCCCEEE
Confidence            3679999999999999999999999  78 999999975443222   1    167789999999999999999999999


Q ss_pred             EeccCCCCCC-------------CCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           86 HVASPCTLED-------------PVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        86 ~~a~~~~~~~-------------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      |+||......             ..+.+...+++|+.++.+++++|++.++++||++||.++..           |..+ 
T Consensus        75 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~-----------~~~~-  142 (253)
T 1xq6_A           75 ILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTN-----------PDHP-  142 (253)
T ss_dssp             ECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTC-----------TTCG-
T ss_pred             EeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCC-----------CCCc-
Confidence            9999753210             01122356799999999999999999999999999965421           1111 


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHH
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK  232 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  232 (307)
                      ...|.   ...|+.+|..+|.+++    ..+++++++||+.++|+..... ...        .+..........++++++
T Consensus       143 ~~~~~---~~~y~~sK~~~e~~~~----~~~i~~~~vrpg~v~~~~~~~~-~~~--------~~~~~~~~~~~~~~~~~~  206 (253)
T 1xq6_A          143 LNKLG---NGNILVWKRKAEQYLA----DSGTPYTIIRAGGLLDKEGGVR-ELL--------VGKDDELLQTDTKTVPRA  206 (253)
T ss_dssp             GGGGG---GCCHHHHHHHHHHHHH----TSSSCEEEEEECEEECSCSSSS-CEE--------EESTTGGGGSSCCEEEHH
T ss_pred             ccccc---chhHHHHHHHHHHHHH----hCCCceEEEecceeecCCcchh-hhh--------ccCCcCCcCCCCcEEcHH
Confidence            11121   1358889999998886    5799999999999999875322 111        001111112245689999


Q ss_pred             HHHHHHHHhhcCCCCCc-eEEecCC----cccHHHHHHHHHHhC
Q 021819          233 DVAKAQVLLFESPAASG-RYLCTNG----IYQFGDFAERVSKLF  271 (307)
Q Consensus       233 dva~~~~~~~~~~~~~g-~~~~~~~----~~~~~~~~~~~~~~~  271 (307)
                      |+|++++++++++...| .|+++++    .+++.|+++.+.+.+
T Consensus       207 Dva~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~  250 (253)
T 1xq6_A          207 DVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVT  250 (253)
T ss_dssp             HHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCC
T ss_pred             HHHHHHHHHHcCccccCCEEEecCCCcCCCCCHHHHHHHHHHHh
Confidence            99999999998876544 6776542    489999999999888

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.98  E-value=7.1e-32  Score=248.64  Aligned_cols=242  Identities=15%  Similarity=0.117  Sum_probs=174.2

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      ||+|||||||||||++|++.|+++|+ +|++++|+.....              .+.+|+.+.  +.++++++|+|||+|
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~-~V~~l~R~~~~~~--------------~v~~d~~~~--~~~~l~~~D~Vih~A  209 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGH-EVIQLVRKEPKPG--------------KRFWDPLNP--ASDLLDGADVLVHLA  209 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSSCCTT--------------CEECCTTSC--CTTTTTTCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCCcc--------------ceeecccch--hHHhcCCCCEEEECC
Confidence            78999999999999999999999999 9999999765421              245777643  456678999999999


Q ss_pred             cCCCCCC-CCChhhhhhhhhHHHHHHHHHH-HHhcCCcEEEEecCcceecc-CCCCCCcccccCCCCchhhhcccCccHH
Q 021819           89 SPCTLED-PVDPEKELILPAVQGTLNVLEA-AKRFGVRRVVVTSSISAIVP-NPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (307)
Q Consensus        89 ~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~-~~~~~~~~~v~iSS~~~~~~-~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (307)
                      +...... ........+++|+.++.+++++ +++.++++|||+||++ +|+ ...  ..+++|+++...       +.|+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~-vyg~~~~--~~~~~E~~~~~~-------~~y~  279 (516)
T 3oh8_A          210 GEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVG-FYGHDRG--DEILTEESESGD-------DFLA  279 (516)
T ss_dssp             CC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGG-GGCSEEE--EEEECTTSCCCS-------SHHH
T ss_pred             CCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcce-EecCCCC--CCccCCCCCCCc-------ChHH
Confidence            9764322 2334577899999999999999 5666789999999966 454 222  357888886522       5799


Q ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC--CCcccCcccHHHHHHHHHHhhc
Q 021819          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ--EYHWLGAVPVKDVAKAQVLLFE  243 (307)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~dva~~~~~~~~  243 (307)
                      .+|...|.++. +++..|++++++||+.|||+..    ..+..+......+....+  +++.++|+|++|+|++++.+++
T Consensus       280 ~~~~~~E~~~~-~~~~~gi~~~ilRp~~v~Gp~~----~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~  354 (516)
T 3oh8_A          280 EVCRDWEHATA-PASDAGKRVAFIRTGVALSGRG----GMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIV  354 (516)
T ss_dssp             HHHHHHHHTTH-HHHHTTCEEEEEEECEEEBTTB----SHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH-HHHhCCCCEEEEEeeEEECCCC----ChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHh
Confidence            99999987764 3446799999999999999973    233344433333333333  4578999999999999999999


Q ss_pred             CCCCCceEEec-CCcccHHHHHHHHHHhCCCCCCCccccCC
Q 021819          244 SPAASGRYLCT-NGIYQFGDFAERVSKLFPEFPVHRFVFQS  283 (307)
Q Consensus       244 ~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (307)
                      ++...|.|+++ ++.+++.|+++.+.+.+ +.+.+...+.+
T Consensus       355 ~~~~~g~~ni~~~~~~s~~el~~~i~~~~-g~~~~~~~p~~  394 (516)
T 3oh8_A          355 DAQISGPINAVAPNPVSNADMTKILATSM-HRPAFIQIPSL  394 (516)
T ss_dssp             CTTCCEEEEESCSCCEEHHHHHHHTTC--------------
T ss_pred             CcccCCcEEEECCCCCCHHHHHHHHHHHh-CCCCCCCCCHH
Confidence            88877888765 57799999999999998 55544444433

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.98  E-value=1.4e-31  Score=220.07  Aligned_cols=211  Identities=11%  Similarity=0.109  Sum_probs=145.7

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEecc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a~   89 (307)
                      |+|+|||||||||++|++.|+++|+ +|++++|+++....+.       .+++++.+|++|+++  +.+.++|+|||+||
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~-------~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag   70 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTH-------KDINILQKDIFDLTL--SDLSDQNVVVDAYG   70 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHC-------SSSEEEECCGGGCCH--HHHTTCSEEEECCC
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCchhhhhcc-------CCCeEEeccccChhh--hhhcCCCEEEECCc
Confidence            4799999999999999999999999 9999999876544332       178999999999887  77899999999999


Q ss_pred             CCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHH
Q 021819           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (307)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (307)
                      ....         ....|+.++.+++++|++.+++++|++||.+++++.+..  .+..|+.+..+.      ..|+.+|.
T Consensus        71 ~~~~---------~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~--~~~~~~~~~~~~------~~y~~~k~  133 (221)
T 3ew7_A           71 ISPD---------EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDG--NTLLESKGLREA------PYYPTARA  133 (221)
T ss_dssp             SSTT---------TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC---------------------C------CCSCCHHH
T ss_pred             CCcc---------ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCC--ccccccCCCCCH------HHHHHHHH
Confidence            8421         356799999999999999988999999998887765542  345555544443      67999999


Q ss_pred             HHHHHHHHHHH-hcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCCCCC
Q 021819          170 LAEKAAWEFAE-KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAAS  248 (307)
Q Consensus       170 ~~e~~~~~~~~-~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~~~  248 (307)
                      .+|.+ ..+.+ ..+++++++||+.+||+.....     .+.   ..+..........++++++|+|++++.+++++...
T Consensus       134 ~~e~~-~~~~~~~~gi~~~ivrp~~v~g~~~~~~-----~~~---~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~  204 (221)
T 3ew7_A          134 QAKQL-EHLKSHQAEFSWTYISPSAMFEPGERTG-----DYQ---IGKDHLLFGSDGNSFISMEDYAIAVLDEIERPNHL  204 (221)
T ss_dssp             HHHHH-HHHHTTTTTSCEEEEECSSCCCCC-----------------------------CCCHHHHHHHHHHHHHSCSCT
T ss_pred             HHHHH-HHHHhhccCccEEEEeCcceecCCCccC-----ceE---eccccceecCCCCceEeHHHHHHHHHHHHhCcccc
Confidence            99986 33333 6799999999999999843211     000   11122222223347899999999999999998876


Q ss_pred             c-eEEecCC
Q 021819          249 G-RYLCTNG  256 (307)
Q Consensus       249 g-~~~~~~~  256 (307)
                      | .|++.+.
T Consensus       205 g~~~~~~~~  213 (221)
T 3ew7_A          205 NEHFTVAGK  213 (221)
T ss_dssp             TSEEECCC-
T ss_pred             CCEEEECCC
Confidence            6 5887654

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.97  E-value=6.3e-31  Score=224.82  Aligned_cols=218  Identities=18%  Similarity=0.196  Sum_probs=171.8

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHC--CCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      |+|+|||||||||++|++.|+++  |+ +|++++|++.....+...      +++++.+|++|++++.++++++|+|||+
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~l~~~------~~~~~~~D~~d~~~l~~~~~~~d~vi~~   73 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPAS-QIIAIVRNVEKASTLADQ------GVEVRHGDYNQPESLQKAFAGVSKLLFI   73 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTTHHHHHT------TCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCC-eEEEEEcCHHHHhHHhhc------CCeEEEeccCCHHHHHHHHhcCCEEEEc
Confidence            47999999999999999999998  88 999999987655443321      6789999999999999999999999999


Q ss_pred             ccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHH
Q 021819           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (307)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (307)
                      |+.. .    .   .  ++|+.++.+++++|++.++++|||+||.++ +.  .             +       ..|+.+
T Consensus        74 a~~~-~----~---~--~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~-~~--~-------------~-------~~y~~~  120 (287)
T 2jl1_A           74 SGPH-Y----D---N--TLLIVQHANVVKAARDAGVKHIAYTGYAFA-EE--S-------------I-------IPLAHV  120 (287)
T ss_dssp             CCCC-S----C---H--HHHHHHHHHHHHHHHHTTCSEEEEEEETTG-GG--C-------------C-------STHHHH
T ss_pred             CCCC-c----C---c--hHHHHHHHHHHHHHHHcCCCEEEEECCCCC-CC--C-------------C-------CchHHH
Confidence            9852 1    1   1  679999999999999999999999999654 21  1             1       369999


Q ss_pred             HHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCC-CCCCcccCcccHHHHHHHHHHhhcCCC
Q 021819          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD-TQEYHWLGAVPVKDVAKAQVLLFESPA  246 (307)
Q Consensus       168 K~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~dva~~~~~~~~~~~  246 (307)
                      |..+|.+++    ..+++++++||+.++|+...   ..+...   ...+... ..+++.+++++++|+|++++.+++++.
T Consensus       121 K~~~E~~~~----~~~~~~~ilrp~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  190 (287)
T 2jl1_A          121 HLATEYAIR----TTNIPYTFLRNALYTDFFVN---EGLRAS---TESGAIVTNAGSGIVNSVTRNELALAAATVLTEEG  190 (287)
T ss_dssp             HHHHHHHHH----HTTCCEEEEEECCBHHHHSS---GGGHHH---HHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSS
T ss_pred             HHHHHHHHH----HcCCCeEEEECCEeccccch---hhHHHH---hhCCceeccCCCCccCccCHHHHHHHHHHHhcCCC
Confidence            999999886    47999999999988876421   122222   1223222 234578899999999999999998865


Q ss_pred             CCc-eEEecC-CcccHHHHHHHHHHhCCCCCCCc
Q 021819          247 ASG-RYLCTN-GIYQFGDFAERVSKLFPEFPVHR  278 (307)
Q Consensus       247 ~~g-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  278 (307)
                      ..| .|++++ +.+++.|+++.+.+.+ +.+.+.
T Consensus       191 ~~g~~~~i~~~~~~s~~e~~~~i~~~~-g~~~~~  223 (287)
T 2jl1_A          191 HENKTYNLVSNQPWTFDELAQILSEVS-GKKVVH  223 (287)
T ss_dssp             CTTEEEEECCSSCBCHHHHHHHHHHHH-SSCCEE
T ss_pred             CCCcEEEecCCCcCCHHHHHHHHHHHH-CCcceE
Confidence            445 687765 5899999999999999 555443

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.97  E-value=4.6e-31  Score=225.09  Aligned_cols=240  Identities=16%  Similarity=0.125  Sum_probs=169.2

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      .++|+++||||+|+||++++++|+++|+ +|++++|+.+..+.+.....   .++.++.+|++|.+++.++++       
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   78 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGD-TVIGTARRTEALDDLVAAYP---DRAEAISLDVTDGERIDVVAADVLARYG   78 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHCT---TTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcc---CCceEEEeeCCCHHHHHHHHHHHHHhCC
Confidence            3478999999999999999999999999 99999998766544332211   178999999999999988876       


Q ss_pred             CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHH----HHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLN----VLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~----l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                      ++|+||||||....    ....+++...+++|+.++.+    +++.+++.+.++||++||..+..+.+..          
T Consensus        79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~----------  148 (281)
T 3m1a_A           79 RVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGF----------  148 (281)
T ss_dssp             CCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTC----------
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCc----------
Confidence            78999999997543    22334567899999999554    4445566677899999997775543332          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCC----cchHHHHHHHHcCCCCCCCCc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL----NASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~  224 (307)
                                ..|+.+|.+.|.+.+.++.+   .|+++++++||.|.++......    .....+...............
T Consensus       149 ----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (281)
T 3m1a_A          149 ----------SAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSD  218 (281)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC--
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhcc
Confidence                      57999999999999988877   6999999999999987643321    011111111110000011113


Q ss_pred             ccCcccHHHHHHHHHHhhcCCCCCceEEecCC-cccHHHHHHHHHHh
Q 021819          225 WLGAVPVKDVAKAQVLLFESPAASGRYLCTNG-IYQFGDFAERVSKL  270 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~  270 (307)
                      ...+.+++|+|++++++++.+...+.|+++++ ...+.+....+.+.
T Consensus       219 ~~~~~~~~dva~a~~~~~~~~~~~~~~~l~s~~~~~i~g~~~~i~~~  265 (281)
T 3m1a_A          219 GSQPGDPAKAAAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAE  265 (281)
T ss_dssp             ---CBCHHHHHHHHHHHHHSSSCCSEEEESHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHhCCCCCeEEecCchHHHHHHHHHHHHHHH
Confidence            45678999999999999998877777766544 34445555555443

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.97  E-value=5.2e-30  Score=219.38  Aligned_cols=215  Identities=19%  Similarity=0.252  Sum_probs=164.2

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHC-CCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      |+|+||||||+||++|++.|+++ |+ +|++++|+++....+...      +++++.+|++|++++.++++++|+|||+|
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~-~V~~~~R~~~~~~~~~~~------~v~~~~~D~~d~~~l~~~~~~~d~vi~~a   73 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHID-HFHIGVRNVEKVPDDWRG------KVSVRQLDYFNQESMVEAFKGMDTVVFIP   73 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCT-TEEEEESSGGGSCGGGBT------TBEEEECCTTCHHHHHHHTTTCSEEEECC
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCC-cEEEEECCHHHHHHhhhC------CCEEEEcCCCCHHHHHHHHhCCCEEEEeC
Confidence            37999999999999999999998 88 999999987665444322      78999999999999999999999999999


Q ss_pred             cCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHH
Q 021819           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (307)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (307)
                      +....          ...|+.++.+++++|++.++++|||+||.+..   ..                     .+|..++
T Consensus        74 ~~~~~----------~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~---~~---------------------~~~~~~~  119 (289)
T 3e48_A           74 SIIHP----------SFKRIPEVENLVYAAKQSGVAHIIFIGYYADQ---HN---------------------NPFHMSP  119 (289)
T ss_dssp             CCCCS----------HHHHHHHHHHHHHHHHHTTCCEEEEEEESCCS---TT---------------------CCSTTHH
T ss_pred             CCCcc----------chhhHHHHHHHHHHHHHcCCCEEEEEcccCCC---CC---------------------CCCccch
Confidence            86432          13488999999999999999999999984321   11                     1122222


Q ss_pred             --HHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCC--CCCCcccCcccHHHHHHHHHHhhcC
Q 021819          169 --TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD--TQEYHWLGAVPVKDVAKAQVLLFES  244 (307)
Q Consensus       169 --~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~dva~~~~~~~~~  244 (307)
                        ..+|..+    ++.+++++++||+.++|+.        ..++.....+...  ..++..+++++++|+|++++.++.+
T Consensus       120 ~~~~~e~~~----~~~g~~~~ilrp~~~~~~~--------~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~  187 (289)
T 3e48_A          120 YFGYASRLL----STSGIDYTYVRMAMYMDPL--------KPYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKN  187 (289)
T ss_dssp             HHHHHHHHH----HHHCCEEEEEEECEESTTH--------HHHHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHC
T ss_pred             hHHHHHHHH----HHcCCCEEEEecccccccc--------HHHHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcC
Confidence              2333333    3579999999999999873        1223333322222  2356788999999999999999998


Q ss_pred             CCCCc-eEEecCCcccHHHHHHHHHHhCCCCCCCc
Q 021819          245 PAASG-RYLCTNGIYQFGDFAERVSKLFPEFPVHR  278 (307)
Q Consensus       245 ~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (307)
                      +...| .|+++++.+++.|+++.+.+.+ +.+++.
T Consensus       188 ~~~~g~~~~~~~~~~s~~e~~~~~~~~~-g~~~~~  221 (289)
T 3e48_A          188 PDTWGKRYLLSGYSYDMKELAAILSEAS-GTEIKY  221 (289)
T ss_dssp             GGGTTCEEEECCEEEEHHHHHHHHHHHH-TSCCEE
T ss_pred             CCcCCceEEeCCCcCCHHHHHHHHHHHH-CCceeE
Confidence            76644 6877777899999999999999 555443

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.97  E-value=2.5e-30  Score=215.64  Aligned_cols=209  Identities=17%  Similarity=0.082  Sum_probs=160.5

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCC-eEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYT-SINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      ++|+|+||||+|+||++++++|+++|+. +|++++|++.........      ++.++.+|++|++++.++++++|+|||
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~------~~~~~~~D~~d~~~~~~~~~~~d~vi~   90 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYK------NVNQEVVDFEKLDDYASAFQGHDVGFC   90 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGG------GCEEEECCGGGGGGGGGGGSSCSEEEE
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccC------CceEEecCcCCHHHHHHHhcCCCEEEE
Confidence            4679999999999999999999999973 788999976554332211      678999999999999999999999999


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHH
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (307)
                      |||....   ...+...+++|+.++.+++++|++.++++||++||.+++ ....                     ..|+.
T Consensus        91 ~ag~~~~---~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~-~~~~---------------------~~Y~~  145 (242)
T 2bka_A           91 CLGTTRG---KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGAD-KSSN---------------------FLYLQ  145 (242)
T ss_dssp             CCCCCHH---HHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCC-TTCS---------------------SHHHH
T ss_pred             CCCcccc---cCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCC-CCCc---------------------chHHH
Confidence            9997432   123567889999999999999999998999999996653 2111                     46999


Q ss_pred             HHHHHHHHHHHHHHhcCC-cEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCC
Q 021819          167 SKTLAEKAAWEFAEKHGV-DVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (307)
Q Consensus       167 sK~~~e~~~~~~~~~~~i-~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~  245 (307)
                      +|...|.+++    ..++ +++++||+.++|+.....  ....+........+...  ....+++++|+|+++++++.++
T Consensus       146 sK~~~e~~~~----~~~~~~~~~vrpg~v~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~dva~~~~~~~~~~  217 (242)
T 2bka_A          146 VKGEVEAKVE----ELKFDRYSVFRPGVLLCDRQESR--PGEWLVRKFFGSLPDSW--ASGHSVPVVTVVRAMLNNVVRP  217 (242)
T ss_dssp             HHHHHHHHHH----TTCCSEEEEEECCEEECTTGGGS--HHHHHHHHHHCSCCTTG--GGGTEEEHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHH----hcCCCCeEEEcCceecCCCCCCc--HHHHHHHHhhcccCccc--cCCcccCHHHHHHHHHHHHhCc
Confidence            9999999886    4578 599999999999975321  12222333332222111  1345899999999999999988


Q ss_pred             CCCceEEecC
Q 021819          246 AASGRYLCTN  255 (307)
Q Consensus       246 ~~~g~~~~~~  255 (307)
                      ...|.+++.+
T Consensus       218 ~~~~~~~~~~  227 (242)
T 2bka_A          218 RDKQMELLEN  227 (242)
T ss_dssp             CCSSEEEEEH
T ss_pred             cccCeeEeeH
Confidence            8777777654

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.97  E-value=2.9e-30  Score=220.54  Aligned_cols=213  Identities=20%  Similarity=0.195  Sum_probs=162.6

Q ss_pred             EEEEeCCchhhHHHHHHHHHHC--CCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819           11 TVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      +|+|||||||||++|++.|+++  |+ +|++++|++.....+...      ++.++.+|++|++++.++++++|+|||+|
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~~------~~~~~~~D~~d~~~~~~~~~~~d~vi~~a   73 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPAS-QIVAIVRNPAKAQALAAQ------GITVRQADYGDEAALTSALQGVEKLLLIS   73 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTCHHHHHT------TCEEEECCTTCHHHHHHHTTTCSEEEECC
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCc-eEEEEEcChHhhhhhhcC------CCeEEEcCCCCHHHHHHHHhCCCEEEEeC
Confidence            4899999999999999999998  88 999999987655443321      67899999999999999999999999999


Q ss_pred             cCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHH
Q 021819           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (307)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (307)
                      +...            ..|+.++.+++++|++.++++|||+||.++ +.  .             +       ..|+.+|
T Consensus        74 ~~~~------------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~-~~--~-------------~-------~~y~~sK  118 (286)
T 2zcu_A           74 SSEV------------GQRAPQHRNVINAAKAAGVKFIAYTSLLHA-DT--S-------------P-------LGLADEH  118 (286)
T ss_dssp             --------------------CHHHHHHHHHHHHTCCEEEEEEETTT-TT--C-------------C-------STTHHHH
T ss_pred             CCCc------------hHHHHHHHHHHHHHHHcCCCEEEEECCCCC-CC--C-------------c-------chhHHHH
Confidence            8521            147889999999999999999999999654 21  1             1       3699999


Q ss_pred             HHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCC-CCCCcccCcccHHHHHHHHHHhhcCCCC
Q 021819          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD-TQEYHWLGAVPVKDVAKAQVLLFESPAA  247 (307)
Q Consensus       169 ~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~dva~~~~~~~~~~~~  247 (307)
                      ..+|.+++    ..+++++++||+.++++..    ..+...   ...+... ..++..+++++++|+|++++.+++++..
T Consensus       119 ~~~e~~~~----~~~~~~~ilrp~~~~~~~~----~~~~~~---~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~  187 (286)
T 2zcu_A          119 IETEKMLA----DSGIVYTLLRNGWYSENYL----ASAPAA---LEHGVFIGAAGDGKIASATRADYAAAAARVISEAGH  187 (286)
T ss_dssp             HHHHHHHH----HHCSEEEEEEECCBHHHHH----TTHHHH---HHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSSC
T ss_pred             HHHHHHHH----HcCCCeEEEeChHHhhhhH----HHhHHh---hcCCceeccCCCCccccccHHHHHHHHHHHhcCCCC
Confidence            99999886    4699999999987766431    111111   1222221 2245788999999999999999988654


Q ss_pred             C-ceEEecC-CcccHHHHHHHHHHhCCCCCCC
Q 021819          248 S-GRYLCTN-GIYQFGDFAERVSKLFPEFPVH  277 (307)
Q Consensus       248 ~-g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  277 (307)
                      . +.|++++ +.+++.|+++.+.+.+ +.+.+
T Consensus       188 ~g~~~~i~~~~~~s~~e~~~~i~~~~-g~~~~  218 (286)
T 2zcu_A          188 EGKVYELAGDSAWTLTQLAAELTKQS-GKQVT  218 (286)
T ss_dssp             TTCEEEECCSSCBCHHHHHHHHHHHH-SSCCE
T ss_pred             CCceEEEeCCCcCCHHHHHHHHHHHH-CCCCc
Confidence            4 4688765 4799999999999999 55544

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.97  E-value=4.5e-29  Score=210.16  Aligned_cols=214  Identities=19%  Similarity=0.179  Sum_probs=164.5

Q ss_pred             ccccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--
Q 021819            2 ASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (307)
Q Consensus         2 ~~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--   79 (307)
                      .+|+.+++|+++||||+|+||+++++.|+++|+ +|++++|+.......         ++.++++|++|++++.++++  
T Consensus        21 ~~m~~~~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~---------~~~~~~~Dv~d~~~v~~~~~~~   90 (260)
T 3un1_A           21 QSMMRNQQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIKPSADP---------DIHTVAGDISKPETADRIVREG   90 (260)
T ss_dssp             HHHHHTTCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCCCCSST---------TEEEEESCTTSHHHHHHHHHHH
T ss_pred             hhhhCcCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccC---------ceEEEEccCCCHHHHHHHHHHH
Confidence            456677789999999999999999999999999 999999976543221         68899999999999988876  


Q ss_pred             -----CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCccc
Q 021819           80 -----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVF  146 (307)
Q Consensus        80 -----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~  146 (307)
                           ++|++|||||.....    ...+++.+.+++|+.++.++++++    ++.+.+++|++||..+.......     
T Consensus        91 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-----  165 (260)
T 3un1_A           91 IERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGM-----  165 (260)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTC-----
T ss_pred             HHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCC-----
Confidence                 789999999976532    233456889999999999999987    45667899999996653221111     


Q ss_pred             ccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCC
Q 021819          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (307)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (307)
                                   ....|+.+|...+.+.+.++.+.   |+++++++||.|+++.....   .   ........      
T Consensus       166 -------------~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---~---~~~~~~~~------  220 (260)
T 3un1_A          166 -------------PSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE---T---HSTLAGLH------  220 (260)
T ss_dssp             -------------CCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG---G---HHHHHTTS------
T ss_pred             -------------ccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH---H---HHHHhccC------
Confidence                         11469999999999999988876   89999999999999875431   1   11222222      


Q ss_pred             cccCcccHHHHHHHHHHhhcCCCCCceE-EecC
Q 021819          224 HWLGAVPVKDVAKAQVLLFESPAASGRY-LCTN  255 (307)
Q Consensus       224 ~~~~~i~~~dva~~~~~~~~~~~~~g~~-~~~~  255 (307)
                      ....+.+++|+|++++++.+.....|.. ++.+
T Consensus       221 p~~r~~~~~dva~av~~L~~~~~itG~~i~vdG  253 (260)
T 3un1_A          221 PVGRMGEIRDVVDAVLYLEHAGFITGEILHVDG  253 (260)
T ss_dssp             TTSSCBCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             CCCCCcCHHHHHHHHHHhcccCCCCCcEEEECC
Confidence            2356789999999999997766666764 4443

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.97  E-value=3.9e-29  Score=212.80  Aligned_cols=240  Identities=18%  Similarity=0.177  Sum_probs=174.9

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +++|+|+||||+|+||++++++|+++|+ +|++++|+....+.+........ ++.++.+|++|++++.++++       
T Consensus        14 l~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~   91 (278)
T 2bgk_A           14 LQDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPD-VISFVHCDVTKDEDVRNLVDTTIAKHG   91 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTT-TEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCChhHHHHHHHHhCCCC-ceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4578999999999999999999999999 89999987544332221111111 68899999999999988876       


Q ss_pred             CccEEEEeccCCCC------CCCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 GCKGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 ~~d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                      ++|+||||||....      ....+.+.+.+++|+.++.++++++..    .+.++||++||..+..+.+.         
T Consensus        92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---------  162 (278)
T 2bgk_A           92 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEG---------  162 (278)
T ss_dssp             CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTT---------
T ss_pred             CCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCC---------
Confidence            78999999997542      112245678999999999999998865    35679999999776443321         


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                                ....|+.+|...+.+.+.++.+   .|++++++|||.|+|+....................+    ....
T Consensus       163 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~----~~~~  228 (278)
T 2bgk_A          163 ----------VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAA----NLKG  228 (278)
T ss_dssp             ----------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTC----SSCS
T ss_pred             ----------CCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhccc----cccc
Confidence                      0156999999999999888765   5899999999999999765432212222333222111    1234


Q ss_pred             CcccHHHHHHHHHHhhcCC--CCCce-EEecC-CcccHHHHHHHHHHhC
Q 021819          227 GAVPVKDVAKAQVLLFESP--AASGR-YLCTN-GIYQFGDFAERVSKLF  271 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~--~~~g~-~~~~~-~~~~~~~~~~~~~~~~  271 (307)
                      .+++++|+|+++++++..+  ...|. +++.+ ..+++.|+++.+.+.+
T Consensus       229 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~  277 (278)
T 2bgk_A          229 TLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL  277 (278)
T ss_dssp             CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred             ccCCHHHHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence            6889999999999998653  33464 55554 4688999998877654

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.97  E-value=1.2e-29  Score=216.05  Aligned_cols=237  Identities=14%  Similarity=0.166  Sum_probs=157.7

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCC---CCCCCceEEEEcccCChhHHHHHhc----
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP---GAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      +++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+....   .....++.++.+|++|++++.++++    
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999 8999999754433221110   1111268899999999999988887    


Q ss_pred             ---CccEEEEeccCCCCC----C----CCChhhhhhhhhHHHHHHHHHHHHhc----CCcEEEEecCcce-eccCCCCCC
Q 021819           80 ---GCKGVFHVASPCTLE----D----PVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISA-IVPNPGWKG  143 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~~----~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~iSS~~~-~~~~~~~~~  143 (307)
                         ++|+||||||.....    .    ..+++...+++|+.++.++++++.+.    + ++||++||..+ ..+.+..  
T Consensus        83 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~--  159 (278)
T 1spx_A           83 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDF--  159 (278)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTS--
T ss_pred             HcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCCc--
Confidence               799999999975432    1    33456789999999999999988653    5 79999999765 4433221  


Q ss_pred             cccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCC---cch---HHHHHHHH
Q 021819          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL---NAS---CAVLQQLL  214 (307)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~---~~~---~~~~~~~~  214 (307)
                                        ..|+.+|...+.+.+.++.+   .|+++++++||.|+++......   ...   ........
T Consensus       160 ------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  221 (278)
T 1spx_A          160 ------------------PYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMK  221 (278)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHH
T ss_pred             ------------------cHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHH
Confidence                              56999999999999888765   5899999999999998643210   000   00022222


Q ss_pred             cCCCCCCCCcccCcccHHHHHHHHHHhhcCCC---CCce-EEecC-CcccHHHHHHHHHHhC
Q 021819          215 QGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA---ASGR-YLCTN-GIYQFGDFAERVSKLF  271 (307)
Q Consensus       215 ~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~---~~g~-~~~~~-~~~~~~~~~~~~~~~~  271 (307)
                      ...+      ...+++++|+|+++++++..+.   ..|. +++.+ ..+++.++++.+.+..
T Consensus       222 ~~~p------~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          222 ECVP------AGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             HHCT------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred             hcCC------CcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence            1111      2357899999999999887532   4465 45544 4688999998887654

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.97  E-value=1.9e-30  Score=212.43  Aligned_cols=204  Identities=16%  Similarity=0.139  Sum_probs=156.8

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      +|+|+||||||+||++++++|+++|+ .+|++++|++...         . .+++++.+|++|++++.+++  +|+|||+
T Consensus         5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~---------~-~~~~~~~~D~~~~~~~~~~~--~d~vi~~   72 (215)
T 2a35_A            5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE---------H-PRLDNPVGPLAELLPQLDGS--IDTAFCC   72 (215)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC---------C-TTEECCBSCHHHHGGGCCSC--CSEEEEC
T ss_pred             CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCccc---------C-CCceEEeccccCHHHHHHhh--hcEEEEC
Confidence            56999999999999999999999986 3899999976541         0 17888899999998888777  9999999


Q ss_pred             ccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHH
Q 021819           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (307)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (307)
                      |+....  ...++...+++|+.++.+++++|++.++++||++||..+ ++.+.                     ..|+.+
T Consensus        73 a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~-~~~~~---------------------~~y~~s  128 (215)
T 2a35_A           73 LGTTIK--EAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGA-DAKSS---------------------IFYNRV  128 (215)
T ss_dssp             CCCCHH--HHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTC-CTTCS---------------------SHHHHH
T ss_pred             eeeccc--cCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCccc-CCCCc---------------------cHHHHH
Confidence            987532  123567889999999999999999999999999999664 22111                     579999


Q ss_pred             HHHHHHHHHHHHHhcCCc-EEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCCC
Q 021819          168 KTLAEKAAWEFAEKHGVD-VVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA  246 (307)
Q Consensus       168 K~~~e~~~~~~~~~~~i~-~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~  246 (307)
                      |..+|.+++    ..+++ ++++||+.+||+.....  ..    .... +.........+++++++|+|++++.+++++.
T Consensus       129 K~~~e~~~~----~~~~~~~~~vrp~~v~g~~~~~~--~~----~~~~-~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  197 (215)
T 2a35_A          129 KGELEQALQ----EQGWPQLTIARPSLLFGPREEFR--LA----EILA-APIARILPGKYHGIEACDLARALWRLALEEG  197 (215)
T ss_dssp             HHHHHHHHT----TSCCSEEEEEECCSEESTTSCEE--GG----GGTT-CCCC----CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHH----HcCCCeEEEEeCceeeCCCCcch--HH----HHHH-HhhhhccCCCcCcEeHHHHHHHHHHHHhcCC
Confidence            999999886    45899 99999999999976421  11    1111 1111222246789999999999999999876


Q ss_pred             CCceEEecC-CcccH
Q 021819          247 ASGRYLCTN-GIYQF  260 (307)
Q Consensus       247 ~~g~~~~~~-~~~~~  260 (307)
                       .+.|++++ +.+++
T Consensus       198 -~~~~~i~~~~~~~~  211 (215)
T 2a35_A          198 -KGVRFVESDELRKL  211 (215)
T ss_dssp             -SEEEEEEHHHHHHH
T ss_pred             -CCceEEcHHHHHHh
Confidence             56787764 44444

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.97  E-value=5.4e-30  Score=224.89  Aligned_cols=225  Identities=14%  Similarity=0.096  Sum_probs=168.4

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCc-c---cccCCCCCCCceEEEEcccCChhHHHHHhc--Ccc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS-H---LFALPGAGDANLRVFEADVLDSGAVSRAVE--GCK   82 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~---~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d   82 (307)
                      +|+|+|||||||||++|++.|+++|+ +|++++|++.... .   +..+..   .+++++.+|++|.+++.++++  ++|
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~~~l~~---~~v~~~~~Dl~d~~~l~~~~~~~~~d   85 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHR-PTYILARPGPRSPSKAKIFKALED---KGAIIVYGLINEQEAMEKILKEHEID   85 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTC-CEEEEECSSCCCHHHHHHHHHHHH---TTCEEEECCTTCHHHHHHHHHHTTCC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCC-CEEEEECCCCCChhHHHHHHHHHh---CCcEEEEeecCCHHHHHHHHhhCCCC
Confidence            46899999999999999999999998 9999999763211 1   111110   178999999999999999999  999


Q ss_pred             EEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcC-CcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccC
Q 021819           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK  161 (307)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  161 (307)
                      +|||+++.               .|+.++.+++++|++.+ +++||+ |+.+          ...+|.++..+.      
T Consensus        86 ~Vi~~a~~---------------~n~~~~~~l~~aa~~~g~v~~~v~-S~~g----------~~~~e~~~~~p~------  133 (346)
T 3i6i_A           86 IVVSTVGG---------------ESILDQIALVKAMKAVGTIKRFLP-SEFG----------HDVNRADPVEPG------  133 (346)
T ss_dssp             EEEECCCG---------------GGGGGHHHHHHHHHHHCCCSEEEC-SCCS----------SCTTTCCCCTTH------
T ss_pred             EEEECCch---------------hhHHHHHHHHHHHHHcCCceEEee-cccC----------CCCCccCcCCCc------
Confidence            99999986               27888999999999999 999986 5321          123444444443      


Q ss_pred             ccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCC-C--CCcccCcccHHHHHHHH
Q 021819          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-Q--EYHWLGAVPVKDVAKAQ  238 (307)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~i~~~dva~~~  238 (307)
                      ..|+.+|..+|++++    +.+++++++||+.++|.......    ........+.... .  ++..++|++++|+|+++
T Consensus       134 ~~y~~sK~~~e~~l~----~~g~~~tivrpg~~~g~~~~~~~----~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~  205 (346)
T 3i6i_A          134 LNMYREKRRVRQLVE----ESGIPFTYICCNSIASWPYYNNI----HPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFT  205 (346)
T ss_dssp             HHHHHHHHHHHHHHH----HTTCCBEEEECCEESSCCCSCC---------CCCCSSCEEEETTSCCCEEEECHHHHHHHH
T ss_pred             chHHHHHHHHHHHHH----HcCCCEEEEEecccccccCcccc----ccccccCCCceEEEccCCCceEEecCHHHHHHHH
Confidence            579999999999887    47999999999999997643321    1110001122211 1  34688999999999999


Q ss_pred             HHhhcCCCCC-ceEEec--CCcccHHHHHHHHHHhCCCCCCCc
Q 021819          239 VLLFESPAAS-GRYLCT--NGIYQFGDFAERVSKLFPEFPVHR  278 (307)
Q Consensus       239 ~~~~~~~~~~-g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  278 (307)
                      +.++.++... +.|++.  ++.+++.|+++.+.+.+ +.+++.
T Consensus       206 ~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~-g~~~~~  247 (346)
T 3i6i_A          206 MKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKI-GRTLPR  247 (346)
T ss_dssp             HHHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHHH-TSCCCE
T ss_pred             HHHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHHH-CCCCce
Confidence            9999987654 456654  46799999999999999 665554

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.97  E-value=8.4e-29  Score=208.34  Aligned_cols=222  Identities=20%  Similarity=0.188  Sum_probs=159.8

Q ss_pred             cccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         5 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      +++++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+......   ..++.++++|++|+++++++++     
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   78 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGA-TVLGLDLKPPAGEEPAAEL---GAAVRFRNADVTNEADATAALAFAKQE   78 (257)
T ss_dssp             -CCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            456788999999999999999999999999 8999999776554433221   1168899999999999888876     


Q ss_pred             --CccEEEEeccCCCCC--------CCCChhhhhhhhhHHHHHHHHHHHHhc----------CCcEEEEecCcceeccCC
Q 021819           80 --GCKGVFHVASPCTLE--------DPVDPEKELILPAVQGTLNVLEAAKRF----------GVRRVVVTSSISAIVPNP  139 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~~v~iSS~~~~~~~~  139 (307)
                        ++|++|||||.....        ...+.+.+.+++|+.++.++++++...          +.++||++||..+..+.+
T Consensus        79 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~  158 (257)
T 3tpc_A           79 FGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQI  158 (257)
T ss_dssp             HSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT
T ss_pred             cCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCC
Confidence              789999999986532        123456889999999999999998653          457899999988766554


Q ss_pred             CCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcC
Q 021819          140 GWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQG  216 (307)
Q Consensus       140 ~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~  216 (307)
                      ..                    ..|+.+|...+.+.+.++.+   .|+++++++||.|.++......   ..........
T Consensus       159 ~~--------------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~---~~~~~~~~~~  215 (257)
T 3tpc_A          159 GQ--------------------AAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMP---QDVQDALAAS  215 (257)
T ss_dssp             TC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-----------------CC
T ss_pred             CC--------------------cchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCC---HHHHHHHHhc
Confidence            43                    57999999999998888776   6899999999999998654321   1111111111


Q ss_pred             CCCCCCCcccCcccHHHHHHHHHHhhcCCCCCceEEecCCcc
Q 021819          217 SKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIY  258 (307)
Q Consensus       217 ~~~~~~~~~~~~i~~~dva~~~~~~~~~~~~~g~~~~~~~~~  258 (307)
                      .+     ....+.+++|+|+++++++......|..+..++++
T Consensus       216 ~p-----~~~r~~~~~dva~~v~~l~s~~~itG~~i~vdGG~  252 (257)
T 3tpc_A          216 VP-----FPPRLGRAEEYAALVKHICENTMLNGEVIRLDGAL  252 (257)
T ss_dssp             SS-----SSCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTC
T ss_pred             CC-----CCCCCCCHHHHHHHHHHHcccCCcCCcEEEECCCc
Confidence            11     11457899999999999998766678765555443

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.96  E-value=1.5e-28  Score=199.71  Aligned_cols=199  Identities=17%  Similarity=0.145  Sum_probs=150.1

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEecc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a~   89 (307)
                      |+|+||||||+||++|+++|+++|+ +|++++|++.......      ..+++++.+|++|++++.++++++|+|||+|+
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   76 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEG------PRPAHVVVGDVLQAADVDKTVAGQDAVIVLLG   76 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSS------CCCSEEEESCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeChhhccccc------CCceEEEEecCCCHHHHHHHHcCCCEEEECcc
Confidence            5899999999999999999999998 9999999765443221      11788999999999999999999999999998


Q ss_pred             CCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHH
Q 021819           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT  169 (307)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~  169 (307)
                      .....       ...++|+.++.+++++|++.++++||++||.+. ++....  .      + .      ....|+.+|.
T Consensus        77 ~~~~~-------~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~-~~~~~~--~------~-~------~~~~y~~~K~  133 (206)
T 1hdo_A           77 TRNDL-------SPTTVMSEGARNIVAAMKAHGVDKVVACTSAFL-LWDPTK--V------P-P------RLQAVTDDHI  133 (206)
T ss_dssp             CTTCC-------SCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGG-TSCTTC--S------C-G------GGHHHHHHHH
T ss_pred             CCCCC-------CccchHHHHHHHHHHHHHHhCCCeEEEEeeeee-ccCccc--c------c-c------cchhHHHHHH
Confidence            75431       123589999999999999999999999999654 332211  0      0 0      1257999999


Q ss_pred             HHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcc-cCcccHHHHHHHHHHhhcCCCCC
Q 021819          170 LAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW-LGAVPVKDVAKAQVLLFESPAAS  248 (307)
Q Consensus       170 ~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~dva~~~~~~~~~~~~~  248 (307)
                      .+|.+++    ..+++++++||+.+............              ..... .++++++|+|++++.+++++...
T Consensus       134 ~~e~~~~----~~~i~~~~lrp~~~~~~~~~~~~~~~--------------~~~~~~~~~i~~~Dva~~~~~~~~~~~~~  195 (206)
T 1hdo_A          134 RMHKVLR----ESGLKYVAVMPPHIGDQPLTGAYTVT--------------LDGRGPSRVISKHDLGHFMLRCLTTDEYD  195 (206)
T ss_dssp             HHHHHHH----HTCSEEEEECCSEEECCCCCSCCEEE--------------SSSCSSCSEEEHHHHHHHHHHTTSCSTTT
T ss_pred             HHHHHHH----hCCCCEEEEeCCcccCCCCCcceEec--------------ccCCCCCCccCHHHHHHHHHHHhcCcccc
Confidence            9999885    57999999999998322211110000              01111 58999999999999999987655


Q ss_pred             c-eEEecCC
Q 021819          249 G-RYLCTNG  256 (307)
Q Consensus       249 g-~~~~~~~  256 (307)
                      | .|+++++
T Consensus       196 g~~~~i~~g  204 (206)
T 1hdo_A          196 GHSTYPSHQ  204 (206)
T ss_dssp             TCEEEEECC
T ss_pred             ccceeeecc
Confidence            5 5776653

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.96  E-value=2e-29  Score=221.45  Aligned_cols=224  Identities=16%  Similarity=0.118  Sum_probs=167.4

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC--cccccCCCCCCCceEEEEcc-cCChhHHHHHhcCccEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGAGDANLRVFEAD-VLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~i~~D-~~d~~~~~~~~~~~d~vi   85 (307)
                      +|+|+|||||||||++|++.|+++|+ +|++++|+++..  +.+...     .+++++.+| ++|++++.++++++|+||
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~l~~~-----~~v~~v~~D~l~d~~~l~~~~~~~d~Vi   78 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKGLIAEELQAI-----PNVTLFQGPLLNNVPLMDTLFEGAHLAF   78 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCSHHHHHHHTS-----TTEEEEESCCTTCHHHHHHHHTTCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCCChhhHHHHhhc-----CCcEEEECCccCCHHHHHHHHhcCCEEE
Confidence            46899999999999999999999999 899999976553  222211     168899999 999999999999999999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcC-CcEEEEecCcc-eeccCCCCCCcccccCCCCchhhhcccCcc
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSIS-AIVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~iSS~~-~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (307)
                      |+++...           ...|..+ .+++++|++.+ +++|||+||.. ..++...                    ...
T Consensus        79 ~~a~~~~-----------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~~--------------------~~~  126 (352)
T 1xgk_A           79 INTTSQA-----------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGPWP--------------------AVP  126 (352)
T ss_dssp             ECCCSTT-----------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSSCC--------------------CCT
T ss_pred             EcCCCCC-----------cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCCCC--------------------Ccc
Confidence            9987531           1346666 99999999998 99999999965 2222111                    156


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCC----CCCCCcccCcccH-HHHHHHH
Q 021819          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK----DTQEYHWLGAVPV-KDVAKAQ  238 (307)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~-~dva~~~  238 (307)
                      |+.+|..+|.+++    ..+++++++||+ +||+............ .....+..    ...+++.++++++ +|+|+++
T Consensus       127 y~~sK~~~E~~~~----~~gi~~~ivrpg-~~g~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai  200 (352)
T 1xgk_A          127 MWAPKFTVENYVR----QLGLPSTFVYAG-IYNNNFTSLPYPLFQM-ELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPAL  200 (352)
T ss_dssp             TTHHHHHHHHHHH----TSSSCEEEEEEC-EEGGGCBSSSCSSCBE-EECTTSCEEEEESSCTTSCEEEECHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH----HcCCCEEEEecc-eecCCchhcccccccc-cccCCCceEEeeccCCCCceeeEecHHHHHHHH
Confidence            9999999999986    459999999987 6887653321000000 00012222    1114578899999 9999999


Q ss_pred             HHhhcCCC---CCceEEecCCcccHHHHHHHHHHhCCCCCCC
Q 021819          239 VLLFESPA---ASGRYLCTNGIYQFGDFAERVSKLFPEFPVH  277 (307)
Q Consensus       239 ~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (307)
                      +.+++++.   .++.|+++++.+++.|+++.+.+.+ +.+.+
T Consensus       201 ~~~l~~~~~~~~g~~~~l~~~~~s~~e~~~~i~~~~-G~~~~  241 (352)
T 1xgk_A          201 LQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRAL-NRRVT  241 (352)
T ss_dssp             HHHHHHCHHHHTTCEEEECSEEECHHHHHHHHHHHH-TSCEE
T ss_pred             HHHHhCCchhhCCeEEEEecCCCCHHHHHHHHHHHH-CCCCc
Confidence            99998752   3457988888899999999999999 55544

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.96  E-value=1.8e-29  Score=217.14  Aligned_cols=225  Identities=17%  Similarity=0.140  Sum_probs=170.5

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCC-CCeEEEEeCCCCCCc--ccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSS--HLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      +|+|+||||||+||++++++|+++| + +|++++|++....  .+...      +++++.+|++|++++.++++++|+||
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-~V~~~~R~~~~~~~~~l~~~------~~~~~~~D~~d~~~l~~~~~~~d~vi   77 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTF-KVRVVTRNPRKKAAKELRLQ------GAEVVQGDQDDQVIMELALNGAYATF   77 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSS-EEEEEESCTTSHHHHHHHHT------TCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCc-eEEEEEcCCCCHHHHHHHHC------CCEEEEecCCCHHHHHHHHhcCCEEE
Confidence            4699999999999999999999998 8 9999999865531  12111      68899999999999999999999999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHH
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (307)
                      |+++....        ...+.|+.++.+++++|++.++++||++||. ++++...        ..         ....|+
T Consensus        78 ~~a~~~~~--------~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~-~~~~~~~--------~~---------~~~~y~  131 (299)
T 2wm3_A           78 IVTNYWES--------CSQEQEVKQGKLLADLARRLGLHYVVYSGLE-NIKKLTA--------GR---------LAAAHF  131 (299)
T ss_dssp             ECCCHHHH--------TCHHHHHHHHHHHHHHHHHHTCSEEEECCCC-CHHHHTT--------TS---------CCCHHH
T ss_pred             EeCCCCcc--------ccchHHHHHHHHHHHHHHHcCCCEEEEEcCc-cccccCC--------Cc---------ccCchh
Confidence            99875211        1245678899999999999999999997763 3333111        10         114699


Q ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCC--C--CCCCCcccCcccHHHHHHHHHHh
Q 021819          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS--K--DTQEYHWLGAVPVKDVAKAQVLL  241 (307)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~i~~~dva~~~~~~  241 (307)
                      .+|..+|.+++    ..+++++++||+.+||+.........      ...+.  .  ...++..+++++++|+|++++.+
T Consensus       132 ~sK~~~e~~~~----~~gi~~~ilrp~~~~~~~~~~~~~~~------~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  201 (299)
T 2wm3_A          132 DGKGEVEEYFR----DIGVPMTSVRLPCYFENLLSHFLPQK------APDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSL  201 (299)
T ss_dssp             HHHHHHHHHHH----HHTCCEEEEECCEEGGGGGTTTCCEE------CTTSSSEEECCCCTTSCEEEECGGGHHHHHHHH
T ss_pred             hHHHHHHHHHH----HCCCCEEEEeecHHhhhchhhcCCcc------cCCCCEEEEEecCCCCccceecHHHHHHHHHHH
Confidence            99999999886    45999999999999997543111100      01121  1  12255778999999999999999


Q ss_pred             hcCCC--CCceEEecCCcccHHHHHHHHHHhCCCCCCC
Q 021819          242 FESPA--ASGRYLCTNGIYQFGDFAERVSKLFPEFPVH  277 (307)
Q Consensus       242 ~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (307)
                      +.++.  .+..|+++++.+++.|+++.+.+.+ +.+++
T Consensus       202 l~~~~~~~g~~~~~~g~~~s~~e~~~~~~~~~-g~~~~  238 (299)
T 2wm3_A          202 LKMPEKYVGQNIGLSTCRHTAEEYAALLTKHT-RKVVH  238 (299)
T ss_dssp             HHSHHHHTTCEEECCSEEECHHHHHHHHHHHH-SSCEE
T ss_pred             HcChhhhCCeEEEeeeccCCHHHHHHHHHHHH-CCCce
Confidence            98752  2346888887899999999999999 55544

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.96  E-value=8.3e-29  Score=207.18  Aligned_cols=224  Identities=17%  Similarity=0.135  Sum_probs=169.1

Q ss_pred             CccccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-
Q 021819            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (307)
Q Consensus         1 m~~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-   79 (307)
                      |..|+++++|+++||||+|+||+++++.|+++|+ +|++.+|+.+..+.+.....   .+...+++|++|+++++++++ 
T Consensus         1 M~~~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~   76 (248)
T 3op4_A            1 MSQFMNLEGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGAQAISDYLG---DNGKGMALNVTNPESIEAVLKA   76 (248)
T ss_dssp             -CCTTCCTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHG---GGEEEEECCTTCHHHHHHHHHH
T ss_pred             CccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhc---ccceEEEEeCCCHHHHHHHHHH
Confidence            6777778899999999999999999999999999 89999997655443322111   157889999999999888876 


Q ss_pred             ------CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcc
Q 021819           80 ------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKV  145 (307)
Q Consensus        80 ------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~  145 (307)
                            ++|++|||||.....    ...+++.+.+++|+.++.++++++..    .+.++||++||..+..+.+..    
T Consensus        77 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~----  152 (248)
T 3op4_A           77 ITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQ----  152 (248)
T ss_dssp             HHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC----
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCC----
Confidence                  789999999976542    23445688999999999999998843    456799999998776655443    


Q ss_pred             cccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCC
Q 021819          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (307)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (307)
                                      ..|+.+|...+.+.+.++.+   .|+++++++||.|.++......   ...........+    
T Consensus       153 ----------------~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~p----  209 (248)
T 3op4_A          153 ----------------ANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALN---DEQRTATLAQVP----  209 (248)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSC---HHHHHHHHHTCT----
T ss_pred             ----------------hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcC---HHHHHHHHhcCC----
Confidence                            57999999999888888765   4899999999999998754431   222233333322    


Q ss_pred             CcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          223 YHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       223 ~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                        ...+.+++|+|+++++++...  ...|..+..+++
T Consensus       210 --~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdgG  244 (248)
T 3op4_A          210 --AGRLGDPREIASAVAFLASPEAAYITGETLHVNGG  244 (248)
T ss_dssp             --TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --CCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCC
Confidence              356789999999999988643  334765444443

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.96  E-value=6.8e-29  Score=209.42  Aligned_cols=225  Identities=20%  Similarity=0.194  Sum_probs=167.3

Q ss_pred             cccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc--
Q 021819            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE--   79 (307)
Q Consensus         3 ~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~--   79 (307)
                      +|+++++|+++||||+|+||+++++.|+++|+ +|++.+|+.+..+.... +......++.++++|++|+++++++++  
T Consensus         4 ~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (262)
T 3pk0_A            4 SMFDLQGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRA   82 (262)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            46677889999999999999999999999999 89999997655433221 111121278999999999999888876  


Q ss_pred             -----CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc----CCcEEEEecCccee-ccCCCCCCcc
Q 021819           80 -----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAI-VPNPGWKGKV  145 (307)
Q Consensus        80 -----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~iSS~~~~-~~~~~~~~~~  145 (307)
                           ++|++|||||.....    ...+++++.+++|+.++.++++++...    +.++||++||..+. .+.+..    
T Consensus        83 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~----  158 (262)
T 3pk0_A           83 VEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGW----  158 (262)
T ss_dssp             HHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTC----
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCC----
Confidence                 789999999976532    233456788999999999999988554    66899999997653 333322    


Q ss_pred             cccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCC
Q 021819          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (307)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (307)
                                      ..|+.+|...+.+.+.++.+   .|+++++++||.|+++.....   ...+........+    
T Consensus       159 ----------------~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p----  215 (262)
T 3pk0_A          159 ----------------SHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN---GEEYIASMARSIP----  215 (262)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT---CHHHHHHHHTTST----
T ss_pred             ----------------hhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc---CHHHHHHHHhcCC----
Confidence                            57999999999999988877   599999999999998754322   1233333333322    


Q ss_pred             CcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          223 YHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       223 ~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                        ...+.+++|+|+++++++...  ...|..+..+++
T Consensus       216 --~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG  250 (262)
T 3pk0_A          216 --AGALGTPEDIGHLAAFLATKEAGYITGQAIAVDGG  250 (262)
T ss_dssp             --TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --CCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence              345789999999999988643  345765444433

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.96  E-value=5.3e-29  Score=207.00  Aligned_cols=228  Identities=19%  Similarity=0.131  Sum_probs=162.8

Q ss_pred             cccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         5 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      +++++|+++||||+++||+++++.|+++|+ +|++.+|+.+..+.+.+ +...+. ++..+++|++|+++++++++    
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~-~~~~~~~Dvt~~~~v~~~~~~~~~   80 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGK-EVLGVKADVSKKKDVEEFVRRTFE   80 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999 89999997665443332 211122 78899999999999888775    


Q ss_pred             ---CccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccc
Q 021819           80 ---GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                         ++|++|||||....     +...++|++.+++|+.++.++.+++    ++++.++||++||+.+..+.+..      
T Consensus        81 ~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~------  154 (254)
T 4fn4_A           81 TYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAG------  154 (254)
T ss_dssp             HHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSC------
T ss_pred             HcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCC------
Confidence               67999999996542     2334567899999999998888877    44566899999998876655443      


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCc
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (307)
                                    ..|+.+|.....+.+.++.+   +||++++|.||.|.++.............+......+     .
T Consensus       155 --------------~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~-----~  215 (254)
T 4fn4_A          155 --------------APYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMS-----L  215 (254)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHT-----T
T ss_pred             --------------hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCC-----C
Confidence                          34556665555555554443   5999999999999988654432222222222211111     1


Q ss_pred             ccCcccHHHHHHHHHHhhcC--CCCCceEEecCCccc
Q 021819          225 WLGAVPVKDVAKAQVLLFES--PAASGRYLCTNGIYQ  259 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~~~  259 (307)
                      ...+..++|+|.++++++..  ....|..+..|+++|
T Consensus       216 ~~R~g~pediA~~v~fLaSd~a~~iTG~~i~VDGG~t  252 (254)
T 4fn4_A          216 SSRLAEPEDIANVIVFLASDEASFVNGDAVVVDGGLT  252 (254)
T ss_dssp             CCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCcCHHHHHHHHHHHhCchhcCCcCCEEEeCCCcc
Confidence            23467899999999988853  334577777777765

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.96  E-value=6.4e-29  Score=210.68  Aligned_cols=228  Identities=16%  Similarity=0.105  Sum_probs=164.9

Q ss_pred             CccccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-
Q 021819            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (307)
Q Consensus         1 m~~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-   79 (307)
                      |+.++++++|+++||||+|+||+++++.|+++|+ +|++++|+....+....+..... ++.++.+|++|.+++.++.+ 
T Consensus        23 m~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~  100 (273)
T 3uf0_A           23 MTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGVKEVADEIADGGG-SAEAVVADLADLEGAANVAEE  100 (273)
T ss_dssp             --CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHHHHHHHHHHTTTC-EEEEEECCTTCHHHHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHH
Confidence            3344456789999999999999999999999999 89888876433222222222222 78899999999998877754 


Q ss_pred             -----CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCccc
Q 021819           80 -----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVF  146 (307)
Q Consensus        80 -----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~  146 (307)
                           ++|+||||||.....    ...+++.+.+++|+.++.++++++    ++.+.++||++||..+..+.+..     
T Consensus       101 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~-----  175 (273)
T 3uf0_A          101 LAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNV-----  175 (273)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSC-----
T ss_pred             HHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCC-----
Confidence                 789999999986542    233456889999999999999987    44566899999998775544332     


Q ss_pred             ccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCC
Q 021819          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (307)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (307)
                                     ..|+.+|...+.+.+.++.+   .|+++++++||.|.++...... .............+     
T Consensus       176 ---------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p-----  234 (273)
T 3uf0_A          176 ---------------AAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALR-ADDERAAEITARIP-----  234 (273)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH-TSHHHHHHHHHHST-----
T ss_pred             ---------------hhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcc-cCHHHHHHHHhcCC-----
Confidence                           57999999999999988876   5899999999999987643210 01122222222222     


Q ss_pred             cccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          224 HWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       224 ~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                       ...+.+++|+|+++++++...  ...|..+..+++
T Consensus       235 -~~r~~~pedva~~v~~L~s~~a~~itG~~i~vdGG  269 (273)
T 3uf0_A          235 -AGRWATPEDMVGPAVFLASDAASYVHGQVLAVDGG  269 (273)
T ss_dssp             -TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -CCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECcC
Confidence             345789999999999988753  345765444443

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.96  E-value=1.6e-28  Score=209.31  Aligned_cols=235  Identities=20%  Similarity=0.142  Sum_probs=164.1

Q ss_pred             cccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc--
Q 021819            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE--   79 (307)
Q Consensus         3 ~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~--   79 (307)
                      +|+++++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+.. +..... ++.++++|++|+++++++++  
T Consensus        22 ~m~~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~   99 (283)
T 3v8b_A           22 SMMNQPSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAGG-QAIALEADVSDELQMRNAVRDL   99 (283)
T ss_dssp             -----CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTTC-CEEEEECCTTCHHHHHHHHHHH
T ss_pred             hhcCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHH
Confidence            46667789999999999999999999999999 89999997655443322 222222 78899999999999888776  


Q ss_pred             -----CccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceec--cCCCCCC
Q 021819           80 -----GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIV--PNPGWKG  143 (307)
Q Consensus        80 -----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~--~~~~~~~  143 (307)
                           ++|++|||||....     ....+++.+.+++|+.++.++++++    ++.+.++||++||..+..  +.+.   
T Consensus       100 ~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~---  176 (283)
T 3v8b_A          100 VLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPG---  176 (283)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTT---
T ss_pred             HHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCC---
Confidence                 68999999997532     2233456889999999999999998    555668999999977643  2222   


Q ss_pred             cccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCC
Q 021819          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT  220 (307)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  220 (307)
                                       ...|+.+|...+.+.+.++.+   .|+++++|+||.|.++.......................
T Consensus       177 -----------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  239 (283)
T 3v8b_A          177 -----------------ATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQ  239 (283)
T ss_dssp             -----------------CHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCS
T ss_pred             -----------------chHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhc
Confidence                             157999999999999988877   489999999999999876543111110000000000000


Q ss_pred             CCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCccc
Q 021819          221 QEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIYQ  259 (307)
Q Consensus       221 ~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~~  259 (307)
                      .+.....+.+++|+|+++++++...  ...|..+..+++.+
T Consensus       240 ~p~~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~  280 (283)
T 3v8b_A          240 VPITDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGGQG  280 (283)
T ss_dssp             CGGGTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred             CccccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECcCcc
Confidence            0111145679999999999988643  34577665555543

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.96  E-value=1.5e-28  Score=209.08  Aligned_cols=227  Identities=19%  Similarity=0.117  Sum_probs=165.0

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      |..+++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+.........++.++.+|++|++++.++++    
T Consensus         3 m~~l~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (280)
T 3tox_A            3 MSRLEGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVR   81 (280)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            5556789999999999999999999999999 89999997655443322211112278899999999999888876    


Q ss_pred             ---CccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCccee-ccCCCCCCccc
Q 021819           80 ---GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAI-VPNPGWKGKVF  146 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~-~~~~~~~~~~~  146 (307)
                         ++|++|||||....     ....+.+.+.+++|+.++.++++++.    +.+.++||++||..+. .+.+..     
T Consensus        82 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~-----  156 (280)
T 3tox_A           82 RFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGV-----  156 (280)
T ss_dssp             HHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTC-----
T ss_pred             HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCc-----
Confidence               68999999997532     22334568899999999999999874    3456799999997664 222221     


Q ss_pred             ccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCC-cchHHHHHHHHcCCCCCCC
Q 021819          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYL-NASCAVLQQLLQGSKDTQE  222 (307)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~  222 (307)
                                     ..|+.+|...+.+.+.++.+.   |+++++|+||.|.++...... ..............+    
T Consensus       157 ---------------~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p----  217 (280)
T 3tox_A          157 ---------------APYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHA----  217 (280)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTST----
T ss_pred             ---------------hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCc----
Confidence                           579999999999998887764   899999999999998654311 111222222222222    


Q ss_pred             CcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          223 YHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       223 ~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                        ...+.+++|+|+++++++...  ...|..+..+++
T Consensus       218 --~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG  252 (280)
T 3tox_A          218 --LKRIARPEEIAEAALYLASDGASFVTGAALLADGG  252 (280)
T ss_dssp             --TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --cCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCC
Confidence              345789999999999998754  345765444443

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.96  E-value=7.1e-29  Score=207.16  Aligned_cols=215  Identities=20%  Similarity=0.149  Sum_probs=159.6

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc---Ccc
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GCK   82 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~---~~d   82 (307)
                      ++++|+++||||+|+||++++++|+++|+ +|++++|+.+..+.+....   . +++++.+|++|+++++++++   .+|
T Consensus         4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~-~~~~~~~D~~~~~~~~~~~~~~~~id   78 (244)
T 1cyd_A            4 NFSGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKEC---P-GIEPVCVDLGDWDATEKALGGIGPVD   78 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHS---T-TCEEEECCTTCHHHHHHHHTTCCCCS
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhc---c-CCCcEEecCCCHHHHHHHHHHcCCCC
Confidence            34578999999999999999999999999 8999999765433322211   1 56778999999999999887   479


Q ss_pred             EEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc----C-CcEEEEecCcceeccCCCCCCcccccCCCCc
Q 021819           83 GVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (307)
Q Consensus        83 ~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~  153 (307)
                      +||||||.....    ...+.+.+.+++|+.++.++++++.+.    + .++||++||..+..+.+..            
T Consensus        79 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~------------  146 (244)
T 1cyd_A           79 LLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNL------------  146 (244)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTB------------
T ss_pred             EEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCc------------
Confidence            999999976431    123456789999999999999988553    4 5799999997664432221            


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCccc
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  230 (307)
                              ..|+.+|...|.+.+.++++   .+++++++||+.++|+...... ....++.....+.+      .+++++
T Consensus       147 --------~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~~~------~~~~~~  211 (244)
T 1cyd_A          147 --------ITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVS-ADPEFARKLKERHP------LRKFAE  211 (244)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHT-CCHHHHHHHHHHST------TSSCBC
T ss_pred             --------chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccc-cCHHHHHHHHhcCC------ccCCCC
Confidence                    57999999999999988776   5899999999999997532110 11223333333322      367899


Q ss_pred             HHHHHHHHHHhhcCCC--CCceEE
Q 021819          231 VKDVAKAQVLLFESPA--ASGRYL  252 (307)
Q Consensus       231 ~~dva~~~~~~~~~~~--~~g~~~  252 (307)
                      ++|+|+++++++..+.  ..|..+
T Consensus       212 ~~dva~~~~~l~~~~~~~~~G~~~  235 (244)
T 1cyd_A          212 VEDVVNSILFLLSDRSASTSGGGI  235 (244)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSSEE
T ss_pred             HHHHHHHHHHHhCchhhcccCCEE
Confidence            9999999999997543  345543

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.96  E-value=6.6e-28  Score=204.37  Aligned_cols=219  Identities=20%  Similarity=0.143  Sum_probs=166.2

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++.+|+....+......  . .++.++.+|++|+++++++++      
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (271)
T 3tzq_B            8 ELENKVAIITGACGGIGLETSRVLARAGA-RVVLADLPETDLAGAAASV--G-RGAVHHVVDLTNEVSVRALIDFTIDTF   83 (271)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSCHHHHHHHH--C-TTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHh--C-CCeEEEECCCCCHHHHHHHHHHHHHHc
Confidence            46788999999999999999999999999 8999999876654432211  1 167899999999999988886      


Q ss_pred             -CccEEEEeccCCCC------CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 -GCKGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 -~~d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                       ++|++|||||....      ....+.+.+.+++|+.++.++++++    ++.+.++||++||..+..+.+..       
T Consensus        84 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-------  156 (271)
T 3tzq_B           84 GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMS-------  156 (271)
T ss_dssp             SCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSC-------
T ss_pred             CCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCC-------
Confidence             78999999998632      2233456789999999999999998    56677899999998775554332       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                                   ..|+.+|...+.+.+.++.+   +|+++++++||.|+++......  ............+      .
T Consensus       157 -------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~------~  215 (271)
T 3tzq_B          157 -------------TAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGL--PQPIVDIFATHHL------A  215 (271)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC-----CHHHHHHHHTTST------T
T ss_pred             -------------hHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccC--CHHHHHHHHhcCC------C
Confidence                         57999999999999988877   6899999999999998755221  1233333333222      3


Q ss_pred             cCcccHHHHHHHHHHhhcCC--CCCceE-EecCC
Q 021819          226 LGAVPVKDVAKAQVLLFESP--AASGRY-LCTNG  256 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~--~~~g~~-~~~~~  256 (307)
                      ..+.+++|+|+++++++...  ...|.. .+.++
T Consensus       216 ~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  249 (271)
T 3tzq_B          216 GRIGEPHEIAELVCFLASDRAAFITGQVIAADSG  249 (271)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCcCHHHHHHHHHHHhCcccCCcCCCEEEECCC
Confidence            45779999999999998654  345654 44443

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.96  E-value=1.1e-28  Score=207.42  Aligned_cols=224  Identities=17%  Similarity=0.176  Sum_probs=164.3

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      ++++|+|+||||+|+||+++++.|+++|+ +|++++|+.+..+.+.. +..... ++.++.+|++|+++++++++     
T Consensus         8 ~~~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   85 (255)
T 1fmc_A            8 RLDGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGG-QAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhCC-ceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            35678999999999999999999999999 89999997644332211 111111 68889999999999988876     


Q ss_pred             --CccEEEEeccCCCCC---CCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 --GCKGVFHVASPCTLE---DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                        ++|+||||||.....   ...+++.+.+++|+.++.++++++.    +.+.++||++||..+..+.+..         
T Consensus        86 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~---------  156 (255)
T 1fmc_A           86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINM---------  156 (255)
T ss_dssp             HSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTC---------
T ss_pred             cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCC---------
Confidence              799999999976542   2234567889999999999999884    4567899999997664332221         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                                 ..|+.+|...+.+.+.++.+.   +++++++|||.++++.....  ....+......+.+      ...
T Consensus       157 -----------~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~------~~~  217 (255)
T 1fmc_A          157 -----------TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV--ITPEIEQKMLQHTP------IRR  217 (255)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--CCHHHHHHHHHTCS------SCS
T ss_pred             -----------cccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhc--cChHHHHHHHhcCC------ccc
Confidence                       579999999999998887664   89999999999998754321  12233344444333      345


Q ss_pred             cccHHHHHHHHHHhhcCCC--CCc-eEEecC-Cccc
Q 021819          228 AVPVKDVAKAQVLLFESPA--ASG-RYLCTN-GIYQ  259 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~~--~~g-~~~~~~-~~~~  259 (307)
                      +++++|+|+++++++..+.  ..| .|++.+ ...+
T Consensus       218 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s  253 (255)
T 1fmc_A          218 LGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQE  253 (255)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCC
T ss_pred             CCCHHHHHHHHHHHhCCccccCCCcEEEECCceecc
Confidence            7899999999999987542  235 566654 3344

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.96  E-value=1.6e-29  Score=210.18  Aligned_cols=229  Identities=14%  Similarity=0.088  Sum_probs=164.0

Q ss_pred             CccccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCCCCCceEEEEcccCChhHHHHHhc
Q 021819            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE   79 (307)
Q Consensus         1 m~~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~   79 (307)
                      |+.|.++++|+++||||+++||+++++.|+++|+ +|++.+|+.+..+... ++...+. ++..+++|++|+++++++++
T Consensus         1 Ms~~f~L~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~-~~~~~~~Dv~~~~~v~~~~~   78 (255)
T 4g81_D            1 MTALFDLTGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGY-DAHGVAFDVTDELAIEAAFS   78 (255)
T ss_dssp             --CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHH
T ss_pred             CCCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHH
Confidence            7888889999999999999999999999999999 8999999765543322 2222222 78899999999999888775


Q ss_pred             -------CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHH----h-cCCcEEEEecCcceeccCCCCCC
Q 021819           80 -------GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----R-FGVRRVVVTSSISAIVPNPGWKG  143 (307)
Q Consensus        80 -------~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~-~~~~~~v~iSS~~~~~~~~~~~~  143 (307)
                             ++|++|||||....    +...++|++.+++|+.++.++.+++.    + .+.++||++||..+..+.+..  
T Consensus        79 ~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~--  156 (255)
T 4g81_D           79 KLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTV--  156 (255)
T ss_dssp             HHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTC--
T ss_pred             HHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCc--
Confidence                   57999999997654    23445679999999999999888763    2 345799999998876665553  


Q ss_pred             cccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCC
Q 021819          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT  220 (307)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  220 (307)
                                        ..|+.+|.....+.+.++.+   +||++++|.||.|.++....... ...+...+....|  
T Consensus       157 ------------------~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~-~~~~~~~~~~~~P--  215 (255)
T 4g81_D          157 ------------------APYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIE-DKQFDSWVKSSTP--  215 (255)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHT-CHHHHHHHHHHST--
T ss_pred             ------------------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccC-CHHHHHHHHhCCC--
Confidence                              34666666666666555544   59999999999998875322100 1122222222222  


Q ss_pred             CCCcccCcccHHHHHHHHHHhhcC--CCCCceEEecCCcc
Q 021819          221 QEYHWLGAVPVKDVAKAQVLLFES--PAASGRYLCTNGIY  258 (307)
Q Consensus       221 ~~~~~~~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~~  258 (307)
                          ...+..++|+|.++++++..  ....|..+..|+++
T Consensus       216 ----l~R~g~pediA~~v~fL~S~~a~~iTG~~i~VDGG~  251 (255)
T 4g81_D          216 ----SQRWGRPEELIGTAIFLSSKASDYINGQIIYVDGGW  251 (255)
T ss_dssp             ----TCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             ----CCCCcCHHHHHHHHHHHhCchhCCCcCCEEEECCCe
Confidence                23467899999999988843  33457766666654

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.96  E-value=3.7e-28  Score=208.10  Aligned_cols=232  Identities=16%  Similarity=0.078  Sum_probs=166.2

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc---C
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---G   80 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~---~   80 (307)
                      |+++++|+++||||+|+||+++++.|+++|+ +|++.+|+....+.+....   ..++.++.+|++|.++++++++   +
T Consensus        11 ~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~~~   86 (291)
T 3rd5_A           11 LPSFAQRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTM---AGQVEVRELDLQDLSSVRRFADGVSG   86 (291)
T ss_dssp             CCCCTTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTS---SSEEEEEECCTTCHHHHHHHHHTCCC
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHh---cCCeeEEEcCCCCHHHHHHHHHhcCC
Confidence            4556789999999999999999999999999 9999999866544433222   1278999999999999999987   5


Q ss_pred             ccEEEEeccCCCC--CCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhc
Q 021819           81 CKGVFHVASPCTL--EDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK  158 (307)
Q Consensus        81 ~d~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~  158 (307)
                      +|+||||||....  ....+.++..+++|+.++.++++++.....++||++||..+..+.... .....|..+..+.   
T Consensus        87 iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~-~~~~~~~~~~~~~---  162 (291)
T 3rd5_A           87 ADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINL-EDLNWRSRRYSPW---  162 (291)
T ss_dssp             EEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCS-SCTTCSSSCCCHH---
T ss_pred             CCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCc-ccccccccCCCCc---
Confidence            6999999998653  223456789999999999999999988877799999998766544332 1111122222222   


Q ss_pred             ccCccHHHHHHHHHHHHHHHHHhc---C--CcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHH
Q 021819          159 SRKKWYPVSKTLAEKAAWEFAEKH---G--VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKD  233 (307)
Q Consensus       159 ~~~~~y~~sK~~~e~~~~~~~~~~---~--i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d  233 (307)
                         ..|+.+|.+.+.+.+.++++.   +  +++++++||.|.++.........   ...... .+     ..+-..+++|
T Consensus       163 ---~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~---~~~~~~-~~-----~~~~~~~~~~  230 (291)
T 3rd5_A          163 ---LAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKL---GDALMS-AA-----TRVVATDADF  230 (291)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-----------------------------CHHHHH
T ss_pred             ---chHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHH---HHHHHH-HH-----HHHHhCCHHH
Confidence               579999999999998887664   4  99999999999888754321111   111000 00     1122346999


Q ss_pred             HHHHHHHhhcCCCCCceEEecC
Q 021819          234 VAKAQVLLFESPAASGRYLCTN  255 (307)
Q Consensus       234 va~~~~~~~~~~~~~g~~~~~~  255 (307)
                      +|+++++++..+...|.|+..+
T Consensus       231 ~A~~~~~l~~~~~~~G~~~~vd  252 (291)
T 3rd5_A          231 GARQTLYAASQDLPGDSFVGPR  252 (291)
T ss_dssp             HHHHHHHHHHSCCCTTCEEEET
T ss_pred             HHHHHHHHHcCCCCCCceeCCc
Confidence            9999999998877778776544

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.96  E-value=2.3e-28  Score=204.31  Aligned_cols=217  Identities=18%  Similarity=0.212  Sum_probs=162.4

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC-CCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~-~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      .+|+++||||+|+||+++++.|+++|+ +|++.+|+. +..+.+.. +.... .++.++++|++|+++++++++      
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~   80 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGY-NVAVNYAGSKEKAEAVVEEIKAKG-VDSFAIQANVADADEVKAMIKEVVSQF   80 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT-SCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            367999999999999999999999999 888877743 22222211 11111 268899999999999888876      


Q ss_pred             -CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                       ++|++|||||.....    ...+++.+.+++|+.++.++++++    ++.+.++||++||..+..+.+..         
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  151 (246)
T 3osu_A           81 GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQ---------  151 (246)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC---------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCC---------
Confidence             789999999986532    233456789999999999999998    55567899999998876665443         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                                 ..|+.+|...+.+.+.++.+   .|+++++++||.|.++.....   ..........+.+      ...
T Consensus       152 -----------~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p------~~r  211 (246)
T 3osu_A          152 -----------ANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL---SDELKEQMLTQIP------LAR  211 (246)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCS---CHHHHHHHHTTCT------TCS
T ss_pred             -----------hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCccccc---CHHHHHHHHhcCC------CCC
Confidence                       57999999999998888774   589999999999999875443   2334444444333      356


Q ss_pred             cccHHHHHHHHHHhhcCCC--CCce-EEecC
Q 021819          228 AVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~~--~~g~-~~~~~  255 (307)
                      +.+++|+|+++++++..+.  ..|. +++.+
T Consensus       212 ~~~~~dva~~v~~l~s~~~~~itG~~i~vdg  242 (246)
T 3osu_A          212 FGQDTDIANTVAFLASDKAKYITGQTIHVNG  242 (246)
T ss_dssp             CBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             CcCHHHHHHHHHHHhCccccCCCCCEEEeCC
Confidence            7899999999999886543  3465 44443

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.96  E-value=4.6e-28  Score=207.24  Aligned_cols=224  Identities=21%  Similarity=0.205  Sum_probs=166.6

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc---
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE---   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~---   79 (307)
                      |+.+++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.... +......++.++++|++|+++++++++   
T Consensus        36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  114 (293)
T 3rih_A           36 MFDLSARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVV  114 (293)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHH
Confidence            4456789999999999999999999999999 99999998766544322 222221278899999999998887775   


Q ss_pred             ----CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCccee-ccCCCCCCccc
Q 021819           80 ----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAI-VPNPGWKGKVF  146 (307)
Q Consensus        80 ----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~-~~~~~~~~~~~  146 (307)
                          ++|+||||||.....    ...+++.+.+++|+.++.++++++    ++.+.++||++||..+. .+.+..     
T Consensus       115 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~-----  189 (293)
T 3rih_A          115 DAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGW-----  189 (293)
T ss_dssp             HHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTC-----
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCC-----
Confidence                679999999976542    233456889999999999999988    45566899999997763 443332     


Q ss_pred             ccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCC
Q 021819          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (307)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (307)
                                     ..|+.+|...+.+.+.++.+   .|+++++++||.|+++.....   ...+........+     
T Consensus       190 ---------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p-----  246 (293)
T 3rih_A          190 ---------------SHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDM---GEEYISGMARSIP-----  246 (293)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHT---CHHHHHHHHTTST-----
T ss_pred             ---------------HHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhc---cHHHHHHHHhcCC-----
Confidence                           57999999999999888776   489999999999998754322   1233333333332     


Q ss_pred             cccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          224 HWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       224 ~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                       ...+..++|+|+++++++...  ...|..+..+++
T Consensus       247 -~~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG  281 (293)
T 3rih_A          247 -MGMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGG  281 (293)
T ss_dssp             -TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -CCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence             234678999999999988643  345765444443

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.96  E-value=9.3e-28  Score=197.35  Aligned_cols=218  Identities=17%  Similarity=0.132  Sum_probs=158.5

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc---CccE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GCKG   83 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~---~~d~   83 (307)
                      +++|+++||||+++||+++++.|+++|+ +|++.+|+.+..+....      .++..+++|++|+++++++++   ++|+
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga-~Vv~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~g~iDi   81 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGA-EVVALGLDADGVHAPRH------PRIRREELDITDSQRLQRLFEALPRLDV   81 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTSTTSCCC------TTEEEEECCTTCHHHHHHHHHHCSCCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHhhhhc------CCeEEEEecCCCHHHHHHHHHhcCCCCE
Confidence            4789999999999999999999999999 89999997665443221      178899999999999988876   6899


Q ss_pred             EEEeccCCCC--CCCCChhhhhhhhhHHHHHHHHHHHHhc---CCcEEEEecCcceeccCCCCCCcccccCCCCchhhhc
Q 021819           84 VFHVASPCTL--EDPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCK  158 (307)
Q Consensus        84 vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~  158 (307)
                      +|||||....  ....++|++.+++|+.++..+.+++...   +.++||++||+.+..+.+..            +    
T Consensus        82 LVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~------------~----  145 (242)
T 4b79_A           82 LVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSADR------------P----  145 (242)
T ss_dssp             EEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCSSC------------H----
T ss_pred             EEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCCCC------------H----
Confidence            9999997653  2234467899999999999988877432   23799999998876655543            3    


Q ss_pred             ccCccHHHHHHHHHHHHHHHHH---hcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHH
Q 021819          159 SRKKWYPVSKTLAEKAAWEFAE---KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVA  235 (307)
Q Consensus       159 ~~~~~y~~sK~~~e~~~~~~~~---~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva  235 (307)
                          .|+.||.....+.+.++.   ++||++++|.||.|.+|....... .....+++....|      ...+..++|+|
T Consensus       146 ----~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~-~~~~~~~~~~~~P------lgR~g~peeiA  214 (242)
T 4b79_A          146 ----AYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKA-DVEATRRIMQRTP------LARWGEAPEVA  214 (242)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CC-CHHHHHHHHHTCT------TCSCBCHHHHH
T ss_pred             ----HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccC-CHHHHHHHHhcCC------CCCCcCHHHHH
Confidence                455566555555555544   359999999999999986544322 2234444444433      34567999999


Q ss_pred             HHHHHhhcC--CCCCceEEecCCcc
Q 021819          236 KAQVLLFES--PAASGRYLCTNGIY  258 (307)
Q Consensus       236 ~~~~~~~~~--~~~~g~~~~~~~~~  258 (307)
                      .++++++..  ....|..+..|+++
T Consensus       215 ~~v~fLaSd~a~~iTG~~l~VDGG~  239 (242)
T 4b79_A          215 SAAAFLCGPGASFVTGAVLAVDGGY  239 (242)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhCchhcCccCceEEECccH
Confidence            999888843  33457776666654

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.96  E-value=1.5e-28  Score=207.01  Aligned_cols=224  Identities=16%  Similarity=0.128  Sum_probs=162.9

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      |+.+++|+++||||+|+||+++++.|+++|+ +|++.+|+.+..+.......   .++.++++|++|+++++++++    
T Consensus         3 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~   78 (259)
T 4e6p_A            3 MKRLEGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEIG---PAAYAVQMDVTRQDSIDAAIAATVE   78 (259)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHC---TTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhC---CCceEEEeeCCCHHHHHHHHHHHHH
Confidence            3456788999999999999999999999999 89999997655433322111   167899999999999988886    


Q ss_pred             ---CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc----C-CcEEEEecCcceeccCCCCCCcccc
Q 021819           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                         ++|+||||||.....    ...+++.+.+++|+.++.++++++...    + .++||++||..+..+.+..      
T Consensus        79 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------  152 (259)
T 4e6p_A           79 HAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALV------  152 (259)
T ss_dssp             HSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTB------
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCC------
Confidence               789999999986532    233456888999999999999988543    2 4689999998776554432      


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCC----
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT----  220 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~----  220 (307)
                                    ..|+.+|...+.+.+.++.+.   ++++++++||.|+++.....    ...+..........    
T Consensus       153 --------------~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~  214 (259)
T 4e6p_A          153 --------------AIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGV----DALFARYENRPRGEKKRL  214 (259)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHH----HHHHHHHHTCCTTHHHHH
T ss_pred             --------------hHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhh----hhhhhhhccCChHHHHHH
Confidence                          579999999999999888764   89999999999999863221    11111111111000    


Q ss_pred             C--CCcccCcccHHHHHHHHHHhhcCC--CCCce-EEecC
Q 021819          221 Q--EYHWLGAVPVKDVAKAQVLLFESP--AASGR-YLCTN  255 (307)
Q Consensus       221 ~--~~~~~~~i~~~dva~~~~~~~~~~--~~~g~-~~~~~  255 (307)
                      .  ......+.+++|+|+++++++...  ...|. +++.+
T Consensus       215 ~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdg  254 (259)
T 4e6p_A          215 VGEAVPFGRMGTAEDLTGMAIFLASAESDYIVSQTYNVDG  254 (259)
T ss_dssp             HHHHSTTSSCBCTHHHHHHHHHTTSGGGTTCCSCEEEEST
T ss_pred             HhccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECc
Confidence            0  113567899999999999888643  33464 55544

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.96  E-value=4.2e-28  Score=206.71  Aligned_cols=226  Identities=20%  Similarity=0.162  Sum_probs=162.0

Q ss_pred             cccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC---------cccc----cCCCCCCCceEEEEcccC
Q 021819            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---------SHLF----ALPGAGDANLRVFEADVL   69 (307)
Q Consensus         3 ~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~---------~~~~----~~~~~~~~~~~~i~~D~~   69 (307)
                      +|+.+++|+++||||+|+||+++++.|+++|+ +|++.+|+....         +.+.    .+.... .++.++++|++
T Consensus         4 ~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~   81 (281)
T 3s55_A            4 SMADFEGKTALITGGARGMGRSHAVALAEAGA-DIAICDRCENSDVVGYPLATADDLAETVALVEKTG-RRCISAKVDVK   81 (281)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTT-CCEEEEECCTT
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCccccccccccccHHHHHHHHHHHHhcC-CeEEEEeCCCC
Confidence            46667889999999999999999999999999 899999864321         1111    011111 27889999999


Q ss_pred             ChhHHHHHhc-------CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcce
Q 021819           70 DSGAVSRAVE-------GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISA  134 (307)
Q Consensus        70 d~~~~~~~~~-------~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~  134 (307)
                      |+++++++++       ++|++|||||....    +...+++.+.+++|+.++.++++++    ++.+.++||++||..+
T Consensus        82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  161 (281)
T 3s55_A           82 DRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLG  161 (281)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhh
Confidence            9999888876       78999999997653    2233456889999999999999986    3456689999999877


Q ss_pred             eccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCC--------
Q 021819          135 IVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL--------  203 (307)
Q Consensus       135 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~--------  203 (307)
                      ..+.+..                    ..|+.+|...+.+.+.++.+   .|+++++++||.|+++......        
T Consensus       162 ~~~~~~~--------------------~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~  221 (281)
T 3s55_A          162 HSANFAQ--------------------ASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPD  221 (281)
T ss_dssp             GSCCTTC--------------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC----
T ss_pred             cCCCCCC--------------------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhcccccc
Confidence            5544332                    57999999999999988876   4899999999999998754310        


Q ss_pred             ---cchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCCC--CCceEEecC
Q 021819          204 ---NASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTN  255 (307)
Q Consensus       204 ---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~--~~g~~~~~~  255 (307)
                         ............     .......+.+++|+|+++++++....  ..|..+..+
T Consensus       222 ~~~~~~~~~~~~~~~-----~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vd  273 (281)
T 3s55_A          222 LEKPTLKDVESVFAS-----LHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPID  273 (281)
T ss_dssp             ---CCHHHHHHHHHH-----HCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             ccccchhHHHHHHHh-----hhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEEC
Confidence               000000000000     01123678999999999999987543  346543333

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.96  E-value=4e-28  Score=204.18  Aligned_cols=224  Identities=15%  Similarity=0.084  Sum_probs=160.5

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+.........++.++++|++|+++++++++       
T Consensus         4 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (257)
T 3imf_A            4 MKEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFG   82 (257)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4578999999999999999999999999 89999997655443332211112278899999999999888876       


Q ss_pred             CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHH-----HhcCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA-----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~-----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                      ++|++|||||....    ....+++...+++|+.++.++++++     ++.+.++||++||..+..+.+..         
T Consensus        83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  153 (257)
T 3imf_A           83 RIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGV---------  153 (257)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTC---------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCc---------
Confidence            68999999997543    2233456889999999999999988     33446799999998775554332         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHH----hcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAE----KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~----~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                                 ..|+.+|...+.+.+.++.    +.|+++++|+||.|.++...........+........      ...
T Consensus       154 -----------~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~------p~~  216 (257)
T 3imf_A          154 -----------IHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSV------PLG  216 (257)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTS------TTC
T ss_pred             -----------HHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcC------CCC
Confidence                       5699999999888877764    3489999999999998864332100011111222211      234


Q ss_pred             CcccHHHHHHHHHHhhcCCC--CCceEEecCCc
Q 021819          227 GAVPVKDVAKAQVLLFESPA--ASGRYLCTNGI  257 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~~--~~g~~~~~~~~  257 (307)
                      .+.+++|+|+++++++....  ..|..+..+++
T Consensus       217 r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  249 (257)
T 3imf_A          217 RLGTPEEIAGLAYYLCSDEAAYINGTCMTMDGG  249 (257)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHcCchhcCccCCEEEECCC
Confidence            57899999999999986543  45765444433

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.96  E-value=2.7e-28  Score=205.60  Aligned_cols=227  Identities=15%  Similarity=0.105  Sum_probs=161.5

Q ss_pred             CccccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHh-
Q 021819            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAV-   78 (307)
Q Consensus         1 m~~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~-   78 (307)
                      |+..+.+++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+.. +...+. ++.++.+|++|++++++++ 
T Consensus         1 m~~~~~l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~   78 (260)
T 2ae2_A            1 MAGRWNLEGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGF-KVEASVCDLSSRSERQELMN   78 (260)
T ss_dssp             -CCTTCCTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHH
T ss_pred             CCCccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHH
Confidence            5554456688999999999999999999999999 89999997654332211 111111 6888999999999888877 


Q ss_pred             -------cCccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCC
Q 021819           79 -------EGCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKG  143 (307)
Q Consensus        79 -------~~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~  143 (307)
                             .++|+||||||.....    ...+++...+++|+.++.++++++.    +.+.++||++||..+..+.+..  
T Consensus        79 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--  156 (260)
T 2ae2_A           79 TVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYE--  156 (260)
T ss_dssp             HHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTC--
T ss_pred             HHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCc--
Confidence                   4689999999976431    2234567899999999999999883    4567899999997764433322  


Q ss_pred             cccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCC--cchHHHHHHHHcCCC
Q 021819          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSK  218 (307)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~  218 (307)
                                        ..|+.+|...+.+.+.++.+.   ++++++++||.+.++......  ......+....... 
T Consensus       157 ------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-  217 (260)
T 2ae2_A          157 ------------------AVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRC-  217 (260)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTS-
T ss_pred             ------------------chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcC-
Confidence                              579999999999999888764   899999999999886422110  00011111222222 


Q ss_pred             CCCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecC
Q 021819          219 DTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTN  255 (307)
Q Consensus       219 ~~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~  255 (307)
                           ....+++++|+|+++++++..+  ...|..+..+
T Consensus       218 -----~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vd  251 (260)
T 2ae2_A          218 -----ALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVD  251 (260)
T ss_dssp             -----TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             -----CCCCCCCHHHHHHHHHHHcCccccCCCCCEEEEC
Confidence                 1345889999999999988643  2346544333

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.96  E-value=1.3e-28  Score=209.82  Aligned_cols=238  Identities=22%  Similarity=0.214  Sum_probs=171.1

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCC--CCCceEEEEcccCChhHHHHHhc---
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGA--GDANLRVFEADVLDSGAVSRAVE---   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~--~~~~~~~i~~D~~d~~~~~~~~~---   79 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.... +...  ...++.++++|++|+++++++++   
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   86 (281)
T 3svt_A            8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT   86 (281)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            45789999999999999999999999999 89999997654332221 1111  11168899999999999888876   


Q ss_pred             ----CccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCccc
Q 021819           80 ----GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVF  146 (307)
Q Consensus        80 ----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~  146 (307)
                          ++|++|||||....     ....+++.+.+++|+.++.++++++..    .+.++||++||..+..+.+..     
T Consensus        87 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----  161 (281)
T 3svt_A           87 AWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWF-----  161 (281)
T ss_dssp             HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTC-----
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCC-----
Confidence                57999999997322     223345688999999999999998754    345699999998775544332     


Q ss_pred             ccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCC
Q 021819          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (307)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (307)
                                     ..|+.+|...+.+.+.++.+.   ++++++++||.|+++...... .............+     
T Consensus       162 ---------------~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~p-----  220 (281)
T 3svt_A          162 ---------------GAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAIT-ESAELSSDYAMCTP-----  220 (281)
T ss_dssp             ---------------THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH-TCHHHHHHHHHHCS-----
T ss_pred             ---------------hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcc-cCHHHHHHHHhcCC-----
Confidence                           579999999999999888764   699999999999987643210 01122223322222     


Q ss_pred             cccCcccHHHHHHHHHHhhcCCC--CCce-EEecCC-ccc-HHHHHHHHHHhC
Q 021819          224 HWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTNG-IYQ-FGDFAERVSKLF  271 (307)
Q Consensus       224 ~~~~~i~~~dva~~~~~~~~~~~--~~g~-~~~~~~-~~~-~~~~~~~~~~~~  271 (307)
                       ...+.+++|+|+++++++....  ..|. +++.++ .++ ..++.+.+.+.+
T Consensus       221 -~~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~  272 (281)
T 3svt_A          221 -LPRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVF  272 (281)
T ss_dssp             -SSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHH
T ss_pred             -CCCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhcccccc
Confidence             3457799999999999987533  3465 455433 343 556777777776

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.96  E-value=2.5e-28  Score=208.00  Aligned_cols=231  Identities=19%  Similarity=0.128  Sum_probs=161.5

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC-------------CcccccCCCCCCCceEEEEcccCC
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-------------SSHLFALPGAGDANLRVFEADVLD   70 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-------------~~~~~~~~~~~~~~~~~i~~D~~d   70 (307)
                      |..+++|+++||||+|+||+++++.|+++|+ +|++++|+.+.             .+.+.........++.++++|++|
T Consensus        10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   88 (280)
T 3pgx_A           10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRD   88 (280)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCC
Confidence            4457789999999999999999999999999 89998884221             111111111111278899999999


Q ss_pred             hhHHHHHhc-------CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHH----hcC-CcEEEEecCcce
Q 021819           71 SGAVSRAVE-------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFG-VRRVVVTSSISA  134 (307)
Q Consensus        71 ~~~~~~~~~-------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~~v~iSS~~~  134 (307)
                      +++++++++       ++|++|||||.....    ...+++++.+++|+.++.++++++.    +.+ .++||++||..+
T Consensus        89 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~  168 (280)
T 3pgx_A           89 DAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAG  168 (280)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhh
Confidence            999988876       689999999986542    2344567899999999999999883    333 578999999877


Q ss_pred             eccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHH
Q 021819          135 IVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQ  211 (307)
Q Consensus       135 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~  211 (307)
                      ..+.+..                    ..|+.+|...+.+.+.++.+   .|+++++++||.|+++.....  .....+.
T Consensus       169 ~~~~~~~--------------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~  226 (280)
T 3pgx_A          169 LKATPGN--------------------GHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPE--AMMEIFA  226 (280)
T ss_dssp             TSCCTTB--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHH--HHHHHHH
T ss_pred             ccCCCCc--------------------hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchh--hhhhhhh
Confidence            5554332                    57999999999999888876   589999999999999875421  0111111


Q ss_pred             HHHc--CCCCCCCCcccCcccHHHHHHHHHHhhcCCC--CCceEEecCCc
Q 021819          212 QLLQ--GSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGI  257 (307)
Q Consensus       212 ~~~~--~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~--~~g~~~~~~~~  257 (307)
                      ....  ......+.....+++++|+|+++++++....  ..|..+..+++
T Consensus       227 ~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  276 (280)
T 3pgx_A          227 RHPSFVHSFPPMPVQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKG  276 (280)
T ss_dssp             HCGGGGGGSCCBTTBCSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTT
T ss_pred             cCchhhhhhhhcccCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            1000  0000111222358899999999999886433  45765444433

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.96  E-value=5.9e-28  Score=203.85  Aligned_cols=221  Identities=18%  Similarity=0.084  Sum_probs=159.7

Q ss_pred             cccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         5 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      +.+++|+++||||+|+||+++++.|+++|+ +|++++|+....+.+......   ++.++++|++|+++++++++     
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~d~~~v~~~~~~~~~~   83 (263)
T 3ak4_A            8 FDLSGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLDVMAAQAVVAGLEN---GGFAVEVDVTKRASVDAAMQKAIDA   83 (263)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCTT---CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhc---CCeEEEEeCCCHHHHHHHHHHHHHH
Confidence            345678999999999999999999999999 999999976544333222111   57789999999999988886     


Q ss_pred             --CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cC-CcEEEEecCcceeccCCCCCCccccc
Q 021819           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                        ++|+||||||.....    ...+++...+++|+.++.++++++.+    .+ .++||++||..+..+.+..       
T Consensus        84 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  156 (263)
T 3ak4_A           84 LGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLL-------  156 (263)
T ss_dssp             HTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTC-------
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCc-------
Confidence              789999999976432    22345688999999999999998854    34 5799999997764433221       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcc---h-----HHHHHHHHcCC
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNA---S-----CAVLQQLLQGS  217 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~---~-----~~~~~~~~~~~  217 (307)
                                   ..|+.+|...+.+.+.++.+.   |++++++|||.|+++........   .     ...........
T Consensus       157 -------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (263)
T 3ak4_A          157 -------------AHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLT  223 (263)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTC
T ss_pred             -------------hhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcC
Confidence                         579999999999998887664   99999999999988753210000   0     11112222221


Q ss_pred             CCCCCCcccCcccHHHHHHHHHHhhcCC--CCCce-EEecC
Q 021819          218 KDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGR-YLCTN  255 (307)
Q Consensus       218 ~~~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~-~~~~~  255 (307)
                            ....+++++|+|+++++++..+  ...|. +++.+
T Consensus       224 ------p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdg  258 (263)
T 3ak4_A          224 ------PLGRIEEPEDVADVVVFLASDAARFMTGQGINVTG  258 (263)
T ss_dssp             ------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             ------CCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECc
Confidence                  2345889999999999998754  23465 44443

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.96  E-value=6.7e-28  Score=201.96  Aligned_cols=219  Identities=21%  Similarity=0.172  Sum_probs=159.5

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc-------C
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~   80 (307)
                      +|+++||||+|+||++++++|+++|+ +|++++|+.+..+.+.. +......++.++.+|++|+++++++++       +
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            57899999999999999999999999 89999997644332211 101111268899999999999988876       7


Q ss_pred             ccEEEEeccCCCCCC-------CCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccC
Q 021819           81 CKGVFHVASPCTLED-------PVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        81 ~d~vi~~a~~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                      +|+||||||......       ..+++...+++|+.++.++++++.    +.+.++||++||..+..+.+..        
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~--------  152 (250)
T 2cfc_A           81 IDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGR--------  152 (250)
T ss_dssp             CCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC--------
T ss_pred             CCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCc--------
Confidence            899999999754321       223467889999999987777664    4467899999997765443332        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                                  ..|+.+|...+.+.+.++.+.   +++++++|||.|+|+...... ....+........+      ..
T Consensus       153 ------------~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~------~~  213 (250)
T 2cfc_A          153 ------------SAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRL-DQPELRDQVLARIP------QK  213 (250)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHH-TSHHHHHHHHTTCT------TC
T ss_pred             ------------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCcccccc-CCHHHHHHHHhcCC------CC
Confidence                        579999999999999887664   999999999999998743210 01122333333222      24


Q ss_pred             CcccHHHHHHHHHHhhcCCC--CCceE-EecC
Q 021819          227 GAVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~~--~~g~~-~~~~  255 (307)
                      .+.+++|+|+++++++..+.  ..|.. ++.+
T Consensus       214 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  245 (250)
T 2cfc_A          214 EIGTAAQVADAVMFLAGEDATYVNGAALVMDG  245 (250)
T ss_dssp             SCBCHHHHHHHHHHHHSTTCTTCCSCEEEEST
T ss_pred             CCcCHHHHHHHHHHHcCchhhcccCCEEEECC
Confidence            57899999999999997653  34654 4443

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.96  E-value=1.2e-28  Score=212.34  Aligned_cols=239  Identities=13%  Similarity=0.016  Sum_probs=167.8

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++++|+....+.... +......++.++.+|++|.+++.++++     
T Consensus        23 ~l~~k~vlITGasggiG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (302)
T 1w6u_A           23 SFQGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  101 (302)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999 89999997644332211 100001168899999999999888876     


Q ss_pred             --CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHh-----cCCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR-----FGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                        .+|+||||||....    ....+++...+++|+.++.++++++.+     .+.++||++||..+..+.+..       
T Consensus       102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-------  174 (302)
T 1w6u_A          102 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFV-------  174 (302)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTC-------
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCc-------
Confidence              45999999997543    122345678999999999999888743     345799999997765543332       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                                   ..|+.+|.+.+.+.+.++.+   .|++++++|||.|+++....................+      .
T Consensus       175 -------------~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p------~  235 (302)
T 1w6u_A          175 -------------VPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIP------C  235 (302)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCT------T
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCC------c
Confidence                         57999999999999988877   6999999999999987432111000011122223222      2


Q ss_pred             cCcccHHHHHHHHHHhhcCCC--CCce-EEecC-CcccHHHHHHHHHHhC
Q 021819          226 LGAVPVKDVAKAQVLLFESPA--ASGR-YLCTN-GIYQFGDFAERVSKLF  271 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~~--~~g~-~~~~~-~~~~~~~~~~~~~~~~  271 (307)
                      ..+++++|+|+++++++..+.  ..|. +++.+ ..+++.++++.+.+..
T Consensus       236 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~  285 (302)
T 1w6u_A          236 GRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVT  285 (302)
T ss_dssp             SSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCC
T ss_pred             CCCCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhc
Confidence            357899999999999886533  2454 55554 3567777776666655

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.96  E-value=4.9e-28  Score=202.07  Aligned_cols=219  Identities=18%  Similarity=0.112  Sum_probs=160.2

Q ss_pred             cccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc---Cc
Q 021819            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GC   81 (307)
Q Consensus         5 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~---~~   81 (307)
                      +.+++|+|+||||+|+||+++++.|+++|+ +|++++|+.+..+.+.....    +++++.+|++|+++++++++   ++
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~i   77 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALGSVGPV   77 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHTTCCCC
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcC----CCCEEEEeCCCHHHHHHHHHHcCCC
Confidence            346678999999999999999999999999 89999997654333222111    45778999999999999886   57


Q ss_pred             cEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc----C-CcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           82 KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        82 d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      |+||||||.....    ...+.+...+++|+.++.++++++.+.    + .++||++||..+..+.+..           
T Consensus        78 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-----------  146 (244)
T 3d3w_A           78 DLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNH-----------  146 (244)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTB-----------
T ss_pred             CEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCC-----------
Confidence            9999999975431    123356789999999999999888553    4 5899999997654332221           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcc
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (307)
                               ..|+.+|...|.+.+.++.+   .+++++++|||.|+++....... ............+      ...++
T Consensus       147 ---------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~------~~~~~  210 (244)
T 3d3w_A          147 ---------SVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWS-DPHKAKTMLNRIP------LGKFA  210 (244)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSC-STTHHHHHHHTCT------TCSCB
T ss_pred             ---------chHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhcc-ChHHHHHHHhhCC------CCCCc
Confidence                     57999999999999988766   48999999999999986431100 0011222222222      35688


Q ss_pred             cHHHHHHHHHHhhcCC--CCCce-EEecC
Q 021819          230 PVKDVAKAQVLLFESP--AASGR-YLCTN  255 (307)
Q Consensus       230 ~~~dva~~~~~~~~~~--~~~g~-~~~~~  255 (307)
                      +++|+|+++++++..+  ...|. +++.+
T Consensus       211 ~~~dva~~~~~l~~~~~~~~~G~~~~v~g  239 (244)
T 3d3w_A          211 EVEHVVNAILFLLSDRSGMTTGSTLPVEG  239 (244)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CHHHHHHHHHHHcCccccCCCCCEEEECC
Confidence            9999999999999754  23464 55544

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.96  E-value=1.2e-27  Score=202.09  Aligned_cols=207  Identities=18%  Similarity=0.165  Sum_probs=156.4

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      ..+|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+...      ++.++++|++|.+++.++++       
T Consensus        14 ~~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~------~~~~~~~Dv~d~~~v~~~~~~~~~~~g   86 (266)
T 3p19_A           14 SMKKLVVITGASSGIGEAIARRFSEEGH-PLLLLARRVERLKALNLP------NTLCAQVDVTDKYTFDTAITRAEKIYG   86 (266)
T ss_dssp             -CCCEEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHTTCCT------TEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHhhcC------CceEEEecCCCHHHHHHHHHHHHHHCC
Confidence            3468999999999999999999999999 899999975443332211      68899999999999888876       


Q ss_pred             CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                      ++|+||||||.....    ...+++.+.+++|+.|+.++++++    ++.+.++||++||..+..+.+..          
T Consensus        87 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~----------  156 (266)
T 3p19_A           87 PADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDH----------  156 (266)
T ss_dssp             SEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTC----------
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCC----------
Confidence            689999999986542    223456788999999999977776    45567899999998775554432          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcc-hHHHHHHHHcCCCCCCCCcccC
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNA-SCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                                ..|+.+|...+.+.+.++.+   .|+++++++||.|.++........ ..........        ....
T Consensus       157 ----------~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--------~~~r  218 (266)
T 3p19_A          157 ----------AAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRV--------DMGG  218 (266)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHH--------HTTC
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcc--------cccC
Confidence                      57999999999998888776   589999999999999865433211 1111111000        1345


Q ss_pred             cccHHHHHHHHHHhhcCCCCC
Q 021819          228 AVPVKDVAKAQVLLFESPAAS  248 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~~~~  248 (307)
                      +++++|+|+++++++..+...
T Consensus       219 ~~~pedvA~av~~l~~~~~~~  239 (266)
T 3p19_A          219 VLAADDVARAVLFAYQQPQNV  239 (266)
T ss_dssp             CBCHHHHHHHHHHHHHSCTTE
T ss_pred             CCCHHHHHHHHHHHHcCCCCc
Confidence            789999999999999987654

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.96  E-value=1.8e-27  Score=200.28  Aligned_cols=216  Identities=18%  Similarity=0.097  Sum_probs=155.0

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCc-ccccCCCCCCCceEEEEcccCChhHHHHHhc---
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS-HLFALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~---   79 (307)
                      ||++++|+++||||+|+||+++++.|+++|+ +|++++|+..... .+...      ++.++.+|++|+++++++++   
T Consensus        22 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~   94 (260)
T 3gem_A           22 HMTLSSAPILITGASQRVGLHCALRLLEHGH-RVIISYRTEHASVTELRQA------GAVALYGDFSCETGIMAFIDLLK   94 (260)
T ss_dssp             -----CCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESSCCHHHHHHHHH------TCEEEECCTTSHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHhc------CCeEEECCCCCHHHHHHHHHHHH
Confidence            4456678999999999999999999999999 8999999765432 22221      57889999999999888875   


Q ss_pred             ----CccEEEEeccCCCCCCC---CChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 ----GCKGVFHVASPCTLEDP---VDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 ----~~d~vi~~a~~~~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                          ++|+||||||.......   .+++.+.+++|+.++.++++++..    .+.++||++||..+..+.+..       
T Consensus        95 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-------  167 (260)
T 3gem_A           95 TQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKH-------  167 (260)
T ss_dssp             HHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSC-------
T ss_pred             HhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCc-------
Confidence                68999999997654322   233568999999999999998843    456799999998776554442       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc--CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                                   ..|+.+|...+.+.+.++.+.  ++++++++||.|.++.....     ..........      ...
T Consensus       168 -------------~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~-----~~~~~~~~~~------p~~  223 (260)
T 3gem_A          168 -------------IAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDA-----AYRANALAKS------ALG  223 (260)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC--------------------C------CSC
T ss_pred             -------------HhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCH-----HHHHHHHhcC------CCC
Confidence                         579999999999999888775  59999999999988753211     1111222211      123


Q ss_pred             CcccHHHHHHHHHHhhcCCCCCceEEecCCc
Q 021819          227 GAVPVKDVAKAQVLLFESPAASGRYLCTNGI  257 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~~~~g~~~~~~~~  257 (307)
                      .+.+++|+|++++++++.....|..+..+++
T Consensus       224 r~~~~edva~~v~~L~~~~~itG~~i~vdGG  254 (260)
T 3gem_A          224 IEPGAEVIYQSLRYLLDSTYVTGTTLTVNGG  254 (260)
T ss_dssp             CCCCTHHHHHHHHHHHHCSSCCSCEEEESTT
T ss_pred             CCCCHHHHHHHHHHHhhCCCCCCCEEEECCC
Confidence            4568999999999999877777865444444

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.96  E-value=8.3e-28  Score=202.57  Aligned_cols=224  Identities=17%  Similarity=0.152  Sum_probs=161.6

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      .+++|+|+||||+|+||++++++|+++|+ +|++++|+.+..+.+.. +..... ++.++.+|++|+++++++++     
T Consensus        10 ~l~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   87 (260)
T 3awd_A           10 RLDNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEGH-DVSSVVMDVTNTESVQNAVRSVHEQ   87 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHH
Confidence            34678999999999999999999999999 89999997544322211 111111 68899999999999888876     


Q ss_pred             --CccEEEEeccCCC-CC----CCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 --GCKGVFHVASPCT-LE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 --~~d~vi~~a~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                        ++|+||||||... ..    ...+++.+.+++|+.++.++++++.+    .+.++||++||..+..+.+..       
T Consensus        88 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-------  160 (260)
T 3awd_A           88 EGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQ-------  160 (260)
T ss_dssp             HSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSS-------
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCC-------
Confidence              6899999999764 21    12234578899999999999998854    456899999997654332210       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                           +      ...|+.+|...|.+.+.++.+   .+++++++|||.|+|+...... ....+......+.+      .
T Consensus       161 -----~------~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~~~------~  222 (260)
T 3awd_A          161 -----Q------QAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGM-EKPELYDAWIAGTP------M  222 (260)
T ss_dssp             -----C------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHH-TCHHHHHHHHHTCT------T
T ss_pred             -----C------ccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhccc-CChHHHHHHHhcCC------c
Confidence                 1      146999999999999988877   6999999999999998753110 01233333333322      2


Q ss_pred             cCcccHHHHHHHHHHhhcCC--CCCce-EEecCC
Q 021819          226 LGAVPVKDVAKAQVLLFESP--AASGR-YLCTNG  256 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~--~~~g~-~~~~~~  256 (307)
                      ..+++++|+|+++++++..+  ...|. +++.++
T Consensus       223 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  256 (260)
T 3awd_A          223 GRVGQPDEVASVVQFLASDAASLMTGAIVNVDAG  256 (260)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCCHHHHHHHHHHHhCchhccCCCcEEEECCc
Confidence            45789999999999998653  33464 555543

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.96  E-value=3.7e-28  Score=204.22  Aligned_cols=221  Identities=17%  Similarity=0.133  Sum_probs=163.1

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++.+|+.+..+.+.........++.++++|++|+++++++++      
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   87 (256)
T 3gaf_A            9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF   87 (256)
T ss_dssp             CCTTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            46788999999999999999999999999 89999997654433222111111278899999999999888776      


Q ss_pred             -CccEEEEeccCCCCC---CCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 -GCKGVFHVASPCTLE---DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                       ++|++|||||.....   ...++++..+++|+.++.++++++.    +.+.++||++||..+..+.+..          
T Consensus        88 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  157 (256)
T 3gaf_A           88 GKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRM----------  157 (256)
T ss_dssp             SCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTC----------
T ss_pred             CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCc----------
Confidence             789999999976542   2334568899999999999999873    4566799999998765544332          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (307)
                                ..|+.+|...+.+.+.++.+   .|+++++++||.|.++......  ............+      ...+
T Consensus       158 ----------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~p------~~r~  219 (256)
T 3gaf_A          158 ----------ASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVL--TPEIERAMLKHTP------LGRL  219 (256)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHC--CHHHHHHHHTTCT------TSSC
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhcc--CHHHHHHHHhcCC------CCCC
Confidence                      57999999999999888776   4899999999999887432110  1222333333322      3567


Q ss_pred             ccHHHHHHHHHHhhcCC--CCCce-EEecC
Q 021819          229 VPVKDVAKAQVLLFESP--AASGR-YLCTN  255 (307)
Q Consensus       229 i~~~dva~~~~~~~~~~--~~~g~-~~~~~  255 (307)
                      .+++|+|+++++++...  ...|. +++.+
T Consensus       220 ~~~~dva~~~~~L~s~~~~~itG~~i~vdg  249 (256)
T 3gaf_A          220 GEAQDIANAALFLCSPAAAWISGQVLTVSG  249 (256)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCHHHHHHHHHHHcCCcccCccCCEEEECC
Confidence            89999999999988643  34465 44443

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.96  E-value=5.1e-28  Score=203.52  Aligned_cols=222  Identities=17%  Similarity=0.104  Sum_probs=161.6

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEE-eCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      ++|+++||||+|+||+++++.|+++|+ +|++. .|+....+...........++.++.+|++|+++++++++       
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~-~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGY-NIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG   81 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999 77775 676544333222111111278899999999999888876       


Q ss_pred             CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                      ++|++|||||.....    ...+++...+++|+.++.++++++    ++.+.++||++||..+..+.+..          
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~----------  151 (258)
T 3oid_A           82 RLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENY----------  151 (258)
T ss_dssp             CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTC----------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCc----------
Confidence            569999999965432    233456788999999999999988    44556799999997765544332          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (307)
                                ..|+.+|...+.+.+.++.+.   ++++++++||.|.++....... ............+      ...+
T Consensus       152 ----------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p------~~r~  214 (258)
T 3oid_A          152 ----------TTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPN-REDLLEDARQNTP------AGRM  214 (258)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTT-HHHHHHHHHHHCT------TSSC
T ss_pred             ----------HHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhccc-CHHHHHHHHhcCC------CCCC
Confidence                      579999999999999888774   8999999999999886543321 1223333333222      3467


Q ss_pred             ccHHHHHHHHHHhhcCCC--CCceEEecCCc
Q 021819          229 VPVKDVAKAQVLLFESPA--ASGRYLCTNGI  257 (307)
Q Consensus       229 i~~~dva~~~~~~~~~~~--~~g~~~~~~~~  257 (307)
                      .+++|+|+++++++....  ..|..+..+++
T Consensus       215 ~~~~dva~~v~~L~s~~~~~itG~~i~vdGG  245 (258)
T 3oid_A          215 VEIKDMVDTVEFLVSSKADMIRGQTIIVDGG  245 (258)
T ss_dssp             BCHHHHHHHHHHHTSSTTTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence            899999999999887643  44664443333

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.96  E-value=3.2e-28  Score=205.82  Aligned_cols=220  Identities=15%  Similarity=0.108  Sum_probs=144.6

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHh------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAV------   78 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~------   78 (307)
                      .+++|+|+||||+|+||+++++.|+++|+ +|++++|+....+.... +..... ++.++.+|++|++++++++      
T Consensus        11 ~l~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   88 (266)
T 1xq1_A           11 SLKAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGF-QVTGSVCDASLRPEREKLMQTVSSM   88 (266)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-eeEEEECCCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999 89999997544332211 111111 6889999999999888877      


Q ss_pred             --cCccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCccccc
Q 021819           79 --EGCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        79 --~~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                        .++|+||||||.....    ...+++.+.+++|+.++.++++++    ++.+.++||++||..+..+.+..       
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-------  161 (266)
T 1xq1_A           89 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVG-------  161 (266)
T ss_dssp             HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------C-------
T ss_pred             hCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCC-------
Confidence              4689999999975432    223456788999999999999998    45567899999997765443221       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                                   ..|+.+|...+.+.+.++.+.   +++++++|||.++|+......  ...+........      ..
T Consensus       162 -------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~------~~  220 (266)
T 1xq1_A          162 -------------SIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY--DDEFKKVVISRK------PL  220 (266)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC------------------------------
T ss_pred             -------------chHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc--CHHHHHHHHhcC------CC
Confidence                         579999999999998887764   999999999999998754321  011111111111      12


Q ss_pred             cCcccHHHHHHHHHHhhcCC--CCCce-EEecC
Q 021819          226 LGAVPVKDVAKAQVLLFESP--AASGR-YLCTN  255 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~--~~~g~-~~~~~  255 (307)
                      ..+++++|+|+++++++..+  ...|. +++.+
T Consensus       221 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  253 (266)
T 1xq1_A          221 GRFGEPEEVSSLVAFLCMPAASYITGQTICVDG  253 (266)
T ss_dssp             ---CCGGGGHHHHHHHTSGGGTTCCSCEEECCC
T ss_pred             CCCcCHHHHHHHHHHHcCccccCccCcEEEEcC
Confidence            35789999999999988643  23465 44443

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.96  E-value=5.8e-28  Score=205.69  Aligned_cols=233  Identities=18%  Similarity=0.218  Sum_probs=159.3

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC-CCCcccc-cCCCCCCCceEEEEcccCChhHHHHHhc--
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~-~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~--   79 (307)
                      |+++++|+++||||+|+||+++++.|+++|+ +|++.+|+. ...+.+. .+......++.++.+|++|+++++++++  
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   98 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMV   98 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHH
Confidence            3445678999999999999999999999999 899998843 2222221 1111112278899999999999888876  


Q ss_pred             -----CccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCccc
Q 021819           80 -----GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVF  146 (307)
Q Consensus        80 -----~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~  146 (307)
                           ++|+||||||......    ..+++.+.+++|+.++.++++++    ++.+.++||++||..+..+.+..     
T Consensus        99 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----  173 (281)
T 3v2h_A           99 ADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFK-----  173 (281)
T ss_dssp             HHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC-----
T ss_pred             HHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCc-----
Confidence                 6899999999865422    33456889999999999999987    45566899999998775554432     


Q ss_pred             ccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCC----CC
Q 021819          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS----KD  219 (307)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~----~~  219 (307)
                                     ..|+.+|...+.+.+.++.+.   |+++++++||.|.++............ .......    ..
T Consensus       174 ---------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~  237 (281)
T 3v2h_A          174 ---------------SAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQART-RGITEEQVINEVM  237 (281)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC---------------------------
T ss_pred             ---------------hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhh-cCCCHHHHHHHHH
Confidence                           579999999999998887664   899999999999998654321100000 0000000    00


Q ss_pred             CCCCcccCcccHHHHHHHHHHhhcCCC--CCceEEecCCcc
Q 021819          220 TQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIY  258 (307)
Q Consensus       220 ~~~~~~~~~i~~~dva~~~~~~~~~~~--~~g~~~~~~~~~  258 (307)
                      ........+++++|+|+++++++....  ..|..+..++++
T Consensus       238 ~~~~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~  278 (281)
T 3v2h_A          238 LKGQPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGGW  278 (281)
T ss_dssp             --CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTTG
T ss_pred             HhcCCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCCc
Confidence            011235678999999999999987543  456654444444

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.96  E-value=2e-27  Score=200.75  Aligned_cols=220  Identities=18%  Similarity=0.151  Sum_probs=160.9

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ++++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+....  . .++.++++|++|++++.++++      
T Consensus         9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (265)
T 2o23_A            9 SVKGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKL--G-NNCVFAPADVTSEKDVQTALALAKGKF   84 (265)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHH--C-TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcHhHHHHHHHh--C-CceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            45678999999999999999999999999 8999999876544332211  1 168899999999999988887      


Q ss_pred             -CccEEEEeccCCCCC----------CCCChhhhhhhhhHHHHHHHHHHHHhc----------CCcEEEEecCcceeccC
Q 021819           80 -GCKGVFHVASPCTLE----------DPVDPEKELILPAVQGTLNVLEAAKRF----------GVRRVVVTSSISAIVPN  138 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~~v~iSS~~~~~~~  138 (307)
                       ++|+||||||.....          ...+.+.+.+++|+.++.++++++...          +.++||++||..+..+.
T Consensus        85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  164 (265)
T 2o23_A           85 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ  164 (265)
T ss_dssp             SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred             CCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCC
Confidence             799999999976432          123356789999999999999998654          56799999997765543


Q ss_pred             CCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHc
Q 021819          139 PGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQ  215 (307)
Q Consensus       139 ~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~  215 (307)
                      +..                    ..|+.+|...+.+.+.++.+   .++++++++||.|.++.......   ........
T Consensus       165 ~~~--------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~  221 (265)
T 2o23_A          165 VGQ--------------------AAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE---KVCNFLAS  221 (265)
T ss_dssp             TTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------------CHHHH
T ss_pred             CCC--------------------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCH---HHHHHHHH
Confidence            332                    57999999999988887765   48999999999998886432111   11111111


Q ss_pred             CCCCCCCCcccCcccHHHHHHHHHHhhcCCCCCceEEecCCc
Q 021819          216 GSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGI  257 (307)
Q Consensus       216 ~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~~~g~~~~~~~~  257 (307)
                      ..+     ....+++++|+|+++++++.++...|..+..+++
T Consensus       222 ~~~-----~~~~~~~~~dva~~~~~l~~~~~~~G~~i~vdgG  258 (265)
T 2o23_A          222 QVP-----FPSRLGDPAEYAHLVQAIIENPFLNGEVIRLDGA  258 (265)
T ss_dssp             TCS-----SSCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             cCC-----CcCCCCCHHHHHHHHHHHhhcCccCceEEEECCC
Confidence            111     0145789999999999999877667764443333

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.96  E-value=3.8e-28  Score=205.16  Aligned_cols=223  Identities=17%  Similarity=0.139  Sum_probs=159.7

Q ss_pred             cccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc---
Q 021819            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (307)
Q Consensus         3 ~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~---   79 (307)
                      +|+.+++|+++||||+|+||+++++.|+++|+ +|++.+|+....+.+....  . .++.++.+|++|+++++++++   
T Consensus        21 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~Dv~d~~~v~~~~~~~~   96 (266)
T 3grp_A           21 SMFKLTGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGTREDKLKEIAADL--G-KDVFVFSANLSDRKSIKQLAEVAE   96 (266)
T ss_dssp             CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH--C-SSEEEEECCTTSHHHHHHHHHHHH
T ss_pred             chhccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh--C-CceEEEEeecCCHHHHHHHHHHHH
Confidence            35567789999999999999999999999999 8999998765543332211  1 168899999999999888876   


Q ss_pred             ----CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccc
Q 021819           80 ----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        80 ----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                          ++|+||||||.....    ...+++.+.+++|+.++.++.+++    ++.+.++||++||..+..+.+..      
T Consensus        97 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~------  170 (266)
T 3grp_A           97 REMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQ------  170 (266)
T ss_dssp             HHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CH------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCc------
Confidence                689999999976532    223456889999999977777766    44566899999998776554332      


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCc
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (307)
                                    ..|+.+|...+.+.+.++.+   .|+++++++||.|.++.....   ............+      
T Consensus       171 --------------~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p------  227 (266)
T 3grp_A          171 --------------TNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKL---NEKQKEAIMAMIP------  227 (266)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTC---CHHHHHHHHTTCT------
T ss_pred             --------------hhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhcc---CHHHHHHHHhcCC------
Confidence                          57999999999988888766   489999999999988754322   1223333333322      


Q ss_pred             ccCcccHHHHHHHHHHhhcCC--CCCceEEecCCcc
Q 021819          225 WLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIY  258 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~  258 (307)
                      ...+.+++|+|+++++++...  ...|..+..++++
T Consensus       228 ~~r~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG~  263 (266)
T 3grp_A          228 MKRMGIGEEIAFATVYLASDEAAYLTGQTLHINGGM  263 (266)
T ss_dssp             TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence            356789999999999988653  3457655444443

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.96  E-value=8e-28  Score=204.30  Aligned_cols=225  Identities=14%  Similarity=0.096  Sum_probs=161.9

Q ss_pred             CccccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCCCCCceEEEEcccCChhHHHHHhc
Q 021819            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE   79 (307)
Q Consensus         1 m~~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~   79 (307)
                      |..|+.+++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+... .+.. .. ++.++.+|++|+++++++++
T Consensus        21 ~~~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~-~~-~~~~~~~Dv~d~~~v~~~~~   97 (276)
T 2b4q_A           21 MHPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGA-RVFICARDAEACADTATRLSA-YG-DCQAIPADLSSEAGARRLAQ   97 (276)
T ss_dssp             CCTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHTT-SS-CEEECCCCTTSHHHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHh-cC-ceEEEEeeCCCHHHHHHHHH
Confidence            3445556788999999999999999999999999 8999999765433222 1211 12 57888999999999888776


Q ss_pred             -------CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHH----hcCC----cEEEEecCcceeccCCC
Q 021819           80 -------GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGV----RRVVVTSSISAIVPNPG  140 (307)
Q Consensus        80 -------~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~----~~~v~iSS~~~~~~~~~  140 (307)
                             ++|+||||||....    +...+++...+++|+.++.++++++.    +.+.    ++||++||..+..+.+.
T Consensus        98 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~  177 (276)
T 2b4q_A           98 ALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGE  177 (276)
T ss_dssp             HHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCC
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCC
Confidence                   68999999997643    22344568899999999988888774    3344    79999999776544332


Q ss_pred             CCCcccccCCCCchhhhcccCc-cHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHc-
Q 021819          141 WKGKVFDETSWTDLEYCKSRKK-WYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQ-  215 (307)
Q Consensus       141 ~~~~~~~E~~~~~~~~~~~~~~-~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~-  215 (307)
                      .                    . .|+.+|...+.+.+.++.+   .++++++++||.|.++.....   .......... 
T Consensus       178 ~--------------------~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~  234 (276)
T 2b4q_A          178 Q--------------------AYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHI---ANDPQALEADS  234 (276)
T ss_dssp             S--------------------CTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHH---HHCHHHHHHHH
T ss_pred             C--------------------ccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhc---chhHHHHHHhh
Confidence            1                    4 7999999999999888766   489999999999988763211   0001111111 


Q ss_pred             -CCCCCCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          216 -GSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       216 -~~~~~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                       ..+      ...+.+++|+|+++++++..+  ...|..+..+++
T Consensus       235 ~~~p------~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  273 (276)
T 2b4q_A          235 ASIP------MGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGG  273 (276)
T ss_dssp             HTST------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCCC------CCCcCCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence             111      245789999999999998754  344665444443

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.96  E-value=4.9e-27  Score=196.74  Aligned_cols=220  Identities=15%  Similarity=0.131  Sum_probs=148.8

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ++++|+++||||+|+||+++++.|+++|+ +|++++|+.+..    ..      ++..+.+|++|+++++++++      
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~----~~------~~~~~~~D~~d~~~~~~~~~~~~~~~   72 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGA-KVTGFDQAFTQE----QY------PFATEVMDVADAAQVAQVCQRLLAET   72 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCCCSS----CC------SSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCchhhh----cC------CceEEEcCCCCHHHHHHHHHHHHHHc
Confidence            34578999999999999999999999999 999999975421    11      46788999999999988876      


Q ss_pred             -CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                       ++|+||||||.....    ...+++.+.+++|+.++.++++++    ++.+.++||++||..+..+.+..         
T Consensus        73 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~---------  143 (250)
T 2fwm_X           73 ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGM---------  143 (250)
T ss_dssp             SCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTC---------
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCC---------
Confidence             689999999976432    123456889999999999999988    45566899999997765443322         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHH-HHHc-CCCCCCCCcc
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQ-QLLQ-GSKDTQEYHW  225 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~  225 (307)
                                 ..|+.+|...+.+.+.++.+   .|+++++++||.++++....... ...... .... ..........
T Consensus       144 -----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~  211 (250)
T 2fwm_X          144 -----------SAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWV-SDDAEEQRIRGFGEQFKLGIPL  211 (250)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------------------------------
T ss_pred             -----------chHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCcccccccc-ChhHHHHHHhhhhhcccccCCC
Confidence                       57999999999999888766   48999999999999986432100 000000 0000 0000000012


Q ss_pred             cCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          226 LGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                      ..+.+++|+|+++++++..+  ...|..+..+++
T Consensus       212 ~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  245 (250)
T 2fwm_X          212 GKIARPQEIANTILFLASDLASHITLQDIVVDGG  245 (250)
T ss_dssp             ----CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            34789999999999998753  345665444333

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.95  E-value=1.4e-27  Score=200.57  Aligned_cols=224  Identities=16%  Similarity=0.107  Sum_probs=164.6

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      |..+++|+++||||+|+||+++++.|+++|+ +|++.+|+.+..+.+....   ..++.++++|++|+++++++++    
T Consensus         3 m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (255)
T 4eso_A            3 MGNYQGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQ   78 (255)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHH
Confidence            5567789999999999999999999999999 8999999765544332211   1168899999999998887765    


Q ss_pred             ---CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                         ++|++|||||.....    ...+++++.+++|+.++.++++++...  ..++||++||..+..+.+..         
T Consensus        79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  149 (255)
T 4eso_A           79 TLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGM---------  149 (255)
T ss_dssp             HHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTTB---------
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCc---------
Confidence               689999999986542    234456889999999999999999764  23589999998776554432         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCC--Ccc-hHHHHHHHHcCCCCCCCCc
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPY--LNA-SCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~  224 (307)
                                 ..|+.+|...+.+.+.++.+.   |+++++++||.|.++.....  ... ...+........      .
T Consensus       150 -----------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~------p  212 (255)
T 4eso_A          150 -----------SVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNIT------P  212 (255)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHS------T
T ss_pred             -----------hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccC------C
Confidence                       579999999999999888774   89999999999999865332  111 111112222211      2


Q ss_pred             ccCcccHHHHHHHHHHhhcC-CCCCceEEecCCc
Q 021819          225 WLGAVPVKDVAKAQVLLFES-PAASGRYLCTNGI  257 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~-~~~~g~~~~~~~~  257 (307)
                      ...+.+++|+|+++++++.. ....|..+..+++
T Consensus       213 ~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGG  246 (255)
T 4eso_A          213 MKRNGTADEVARAVLFLAFEATFTTGAKLAVDGG  246 (255)
T ss_dssp             TSSCBCHHHHHHHHHHHHHTCTTCCSCEEEESTT
T ss_pred             CCCCcCHHHHHHHHHHHcCcCcCccCCEEEECCC
Confidence            34577999999999998874 2345665444433

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.95  E-value=1.3e-27  Score=204.99  Aligned_cols=230  Identities=13%  Similarity=0.050  Sum_probs=168.6

Q ss_pred             CccccccCCcEEEEeCCch--hhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHh
Q 021819            1 MASEAEKEEETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV   78 (307)
Q Consensus         1 m~~m~~~~~~~ilItGatG--~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~   78 (307)
                      |..|+.+++|+++||||+|  +||+++++.|+++|+ +|++.+|+....+.+..+..... ++.++++|++|++++++++
T Consensus        22 m~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~   99 (296)
T 3k31_A           22 MRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLG-VKLTVPCDVSDAESVDNMF   99 (296)
T ss_dssp             CCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHT-CCEEEECCTTCHHHHHHHH
T ss_pred             ccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHH
Confidence            4556667789999999997  999999999999999 89999997544333322211111 4678999999999988887


Q ss_pred             c-------CccEEEEeccCCCC--------CCCCChhhhhhhhhHHHHHHHHHHHHhcC--CcEEEEecCcceeccCCCC
Q 021819           79 E-------GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRFG--VRRVVVTSSISAIVPNPGW  141 (307)
Q Consensus        79 ~-------~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~iSS~~~~~~~~~~  141 (307)
                      +       ++|++|||||....        ....+.+...+++|+.++.++++++...-  .++||++||..+..+.+..
T Consensus       100 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~~  179 (296)
T 3k31_A          100 KVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPHY  179 (296)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTT
T ss_pred             HHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCCc
Confidence            6       67999999997642        23344678999999999999999997642  3689999998775544332


Q ss_pred             CCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCC
Q 021819          142 KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK  218 (307)
Q Consensus       142 ~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~  218 (307)
                                          ..|+.+|...+.+.+.++.+.   |+++++|+||.|.++...... .............+
T Consensus       180 --------------------~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p  238 (296)
T 3k31_A          180 --------------------NVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGIS-DFHYILTWNKYNSP  238 (296)
T ss_dssp             --------------------THHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCH-HHHHHHHHHHHHST
T ss_pred             --------------------hhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhccc-chHHHHHHHHhcCC
Confidence                                579999999999988887664   899999999999998754431 11222222222222


Q ss_pred             CCCCCcccCcccHHHHHHHHHHhhcC--CCCCceEEecCCccc
Q 021819          219 DTQEYHWLGAVPVKDVAKAQVLLFES--PAASGRYLCTNGIYQ  259 (307)
Q Consensus       219 ~~~~~~~~~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~~~  259 (307)
                            ...+.+++|+|+++++++..  ....|..+..+++++
T Consensus       239 ------~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~  275 (296)
T 3k31_A          239 ------LRRNTTLDDVGGAALYLLSDLGRGTTGETVHVDCGYH  275 (296)
T ss_dssp             ------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ------CCCCCCHHHHHHHHHHHcCCccCCccCCEEEECCCcc
Confidence                  34567999999999999875  334576554444443

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.95  E-value=7e-28  Score=203.47  Aligned_cols=219  Identities=23%  Similarity=0.200  Sum_probs=156.6

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCC------CCceEEEEcccCChhHHHHHhc
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAG------DANLRVFEADVLDSGAVSRAVE   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~------~~~~~~i~~D~~d~~~~~~~~~   79 (307)
                      +++|+|+||||+|+||+++++.|+++|+ +|++++|+.+..+.+.. +....      ..++.++.+|++|++++.++++
T Consensus         5 ~~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   83 (264)
T 2pd6_A            5 LRSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE   83 (264)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence            3468999999999999999999999999 89999997654433222 11111      0268899999999999888876


Q ss_pred             C-------c-cEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc----C-CcEEEEecCcceeccCCCCC
Q 021819           80 G-------C-KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIVPNPGWK  142 (307)
Q Consensus        80 ~-------~-d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~iSS~~~~~~~~~~~  142 (307)
                      .       + |+||||||.....    ...+.+...+++|+.++.++++++.+.    + .++||++||..+..+.+.. 
T Consensus        84 ~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-  162 (264)
T 2pd6_A           84 QVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQ-  162 (264)
T ss_dssp             HHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTTB-
T ss_pred             HHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCCC-
Confidence            4       3 9999999976531    233456889999999999999998653    4 5799999997766554332 


Q ss_pred             CcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCC
Q 021819          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD  219 (307)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  219 (307)
                                         ..|+.+|...+.+.+.++.+   .+++++++|||.++|+.....   ...+......+.  
T Consensus       163 -------------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~--  218 (264)
T 2pd6_A          163 -------------------TNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKV---PQKVVDKITEMI--  218 (264)
T ss_dssp             -------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-------------CTGGGC--
T ss_pred             -------------------hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhc---CHHHHHHHHHhC--
Confidence                               57999999999999888776   699999999999999875321   111111111111  


Q ss_pred             CCCCcccCcccHHHHHHHHHHhhcCC--CCCce-EEecC
Q 021819          220 TQEYHWLGAVPVKDVAKAQVLLFESP--AASGR-YLCTN  255 (307)
Q Consensus       220 ~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~-~~~~~  255 (307)
                          ....+++++|+|+++++++..+  ...|. +.+.+
T Consensus       219 ----~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  253 (264)
T 2pd6_A          219 ----PMGHLGDPEDVADVVAFLASEDSGYITGTSVEVTG  253 (264)
T ss_dssp             ----TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             ----CCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECC
Confidence                1245789999999999998753  24465 44443

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.95  E-value=1.3e-27  Score=202.14  Aligned_cols=219  Identities=18%  Similarity=0.150  Sum_probs=161.1

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCC-CCcccccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++.+|+.. ..+.+.........++.++.+|++|+++++++++     
T Consensus        25 ~l~~k~vlVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~  103 (269)
T 4dmm_A           25 PLTDRIALVTGASRGIGRAIALELAAAGA-KVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIER  103 (269)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            35678999999999999999999999999 8888887432 2222211110111278899999999999888876     


Q ss_pred             --CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                        ++|++|||||.....    ...+++++.+++|+.++.++++++.    +.+.++||++||..+..+.+..        
T Consensus       104 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  175 (269)
T 4dmm_A          104 WGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQ--------  175 (269)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTC--------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCc--------
Confidence              689999999986542    2334568899999999999999873    4456799999998776655443        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                                  ..|+.+|...+.+.+.++.+   .|+++++++||.|.++.....      .........      ...
T Consensus       176 ------------~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~------~~~~~~~~~------p~~  231 (269)
T 4dmm_A          176 ------------ANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSEL------AAEKLLEVI------PLG  231 (269)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHH------HHHHHGGGC------TTS
T ss_pred             ------------hhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccc------cHHHHHhcC------CCC
Confidence                        57999999999988888765   489999999999998864321      112222222      234


Q ss_pred             CcccHHHHHHHHHHhhcCCC---CCceEEecCCc
Q 021819          227 GAVPVKDVAKAQVLLFESPA---ASGRYLCTNGI  257 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~~---~~g~~~~~~~~  257 (307)
                      .+.+++|+|+++++++..+.   ..|..+..+++
T Consensus       232 r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG  265 (269)
T 4dmm_A          232 RYGEAAEVAGVVRFLAADPAAAYITGQVINIDGG  265 (269)
T ss_dssp             SCBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTT
T ss_pred             CCCCHHHHHHHHHHHhCCcccCCCcCCEEEECCC
Confidence            57899999999999998743   34654433433

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.95  E-value=1.6e-27  Score=199.08  Aligned_cols=227  Identities=19%  Similarity=0.176  Sum_probs=161.7

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ++++|+++||||+++||+++++.|+++|+ .|++.+|+.+....++.+..... ++.++.+|++|+++++++++      
T Consensus         4 ~L~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~v~~~~~~~   81 (258)
T 4gkb_A            4 NLQDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDALAQRQP-RATYLPVELQDDAQCRDAVAQTIATF   81 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHHHHHHCT-TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHHHHhcCC-CEEEEEeecCCHHHHHHHHHHHHHHh
Confidence            57899999999999999999999999999 89999997766443333222222 78899999999998887775      


Q ss_pred             -CccEEEEeccCCCC---CCCCChhhhhhhhhHHHHHHHHHHHHhc---CCcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           80 -GCKGVFHVASPCTL---EDPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        80 -~~d~vi~~a~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                       ++|++|||||....   +...+++.+.+++|+.++.++.+++..+   +.++||++||+.+..+.+..           
T Consensus        82 G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~-----------  150 (258)
T 4gkb_A           82 GRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQGNT-----------  150 (258)
T ss_dssp             SCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCSSC-----------
T ss_pred             CCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCCCc-----------
Confidence             68999999997543   2334567899999999999998887432   23789999998887666553           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCc---chHHHHHHHHcCCCCCCCCccc
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN---ASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                               ..|+.+|.....+.+.++.+   +||++++|.||.|.++.......   .......+.....|.     .+
T Consensus       151 ---------~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl-----g~  216 (258)
T 4gkb_A          151 ---------SGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPL-----GR  216 (258)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTT-----TT
T ss_pred             ---------hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCC-----CC
Confidence                     34666666666666555544   59999999999999887543211   111122233332221     13


Q ss_pred             CcccHHHHHHHHHHhhcC--CCCCceEEecCCccc
Q 021819          227 GAVPVKDVAKAQVLLFES--PAASGRYLCTNGIYQ  259 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~~~  259 (307)
                      .+..++|+|.++++++..  ....|..+..|+++|
T Consensus       217 R~g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG~T  251 (258)
T 4gkb_A          217 RFTTPDEIADTAVFLLSPRASHTTGEWLFVDGGYT  251 (258)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCcCHHHHHHHHHHHhCchhcCccCCeEEECCCcc
Confidence            577899999999888853  334577777776654

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.95  E-value=3.9e-28  Score=204.98  Aligned_cols=222  Identities=17%  Similarity=0.103  Sum_probs=159.1

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      +++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+.. +......++.++++|++|++++.++++      
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (263)
T 3ai3_A            5 ISGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSF   83 (263)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999 89999997644332211 100001168899999999999888876      


Q ss_pred             -CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                       ++|+||||||.....    ...+++...+++|+.++.++++++.    +.+.++||++||..+..+.+..         
T Consensus        84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  154 (263)
T 3ai3_A           84 GGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYE---------  154 (263)
T ss_dssp             SSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC---------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCc---------
Confidence             789999999976432    2234567899999999999998874    4466899999997765443221         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCc--------chHHHHHHHHcC-CC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN--------ASCAVLQQLLQG-SK  218 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~--------~~~~~~~~~~~~-~~  218 (307)
                                 ..|+.+|...+.+.+.++.+   .|++++++|||.|+++.......        ............ . 
T Consensus       155 -----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  222 (263)
T 3ai3_A          155 -----------PIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHA-  222 (263)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHC-
T ss_pred             -----------chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCC-
Confidence                       56999999999999888766   58999999999999975321100        001111222211 1 


Q ss_pred             CCCCCcccCcccHHHHHHHHHHhhcCCC--CCce-EEecC
Q 021819          219 DTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (307)
Q Consensus       219 ~~~~~~~~~~i~~~dva~~~~~~~~~~~--~~g~-~~~~~  255 (307)
                           ....+++++|+|+++++++..+.  ..|. +++.+
T Consensus       223 -----p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdg  257 (263)
T 3ai3_A          223 -----PIKRFASPEELANFFVFLCSERATYSVGSAYFVDG  257 (263)
T ss_dssp             -----TTCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEEST
T ss_pred             -----CCCCCcCHHHHHHHHHHHcCccccCCCCcEEEECC
Confidence                 13468899999999999987543  3464 45543

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.95  E-value=5.5e-28  Score=205.66  Aligned_cols=223  Identities=18%  Similarity=0.097  Sum_probs=161.0

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      .++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.... +..... ++.++.+|++|+++++++++      
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAGH-DVDGSSCDVTSTDEVHAAVAAAVERF   99 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3468999999999999999999999999 89999997654433222 111122 78899999999999888776      


Q ss_pred             -CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh------cCCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR------FGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~------~~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                       ++|+||||||.....    ...+++.+.+++|+.++.++++++..      .+.++||++||..+..+.+..       
T Consensus       100 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~-------  172 (279)
T 3sju_A          100 GPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYA-------  172 (279)
T ss_dssp             CSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTC-------
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCC-------
Confidence             679999999976532    22345678899999999999998755      456799999998775554432       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCC-------Cc-chHHHHHHHHcCC
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY-------LN-ASCAVLQQLLQGS  217 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~-------~~-~~~~~~~~~~~~~  217 (307)
                                   ..|+.+|...+.+.+.++.+   .|+++++++||.|.++.....       .. .............
T Consensus       173 -------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (279)
T 3sju_A          173 -------------APYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKI  239 (279)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTC
T ss_pred             -------------hhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcC
Confidence                         57999999999999888877   589999999999988642210       00 1122222333222


Q ss_pred             CCCCCCcccCcccHHHHHHHHHHhhcCCC--CCceEEecCCc
Q 021819          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGI  257 (307)
Q Consensus       218 ~~~~~~~~~~~i~~~dva~~~~~~~~~~~--~~g~~~~~~~~  257 (307)
                            ....+.+++|+|+++++++....  ..|..+..+++
T Consensus       240 ------p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG  275 (279)
T 3sju_A          240 ------PLGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGG  275 (279)
T ss_dssp             ------TTSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTT
T ss_pred             ------CCCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence                  23467899999999999887543  45665444444

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.95  E-value=3.5e-28  Score=205.88  Aligned_cols=225  Identities=15%  Similarity=0.094  Sum_probs=164.2

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc---
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE---   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~---   79 (307)
                      |+.+++|+++||||+|+||+++++.|+++|+ +|++.+|+.+..+.... +..... ++.++++|++|++++.++++   
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~   98 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGH-DAEAVAFDVTSESEIIEAFARLD   98 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHH
Confidence            3456789999999999999999999999999 89999987654433221 111112 68899999999999988886   


Q ss_pred             ----CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcccc
Q 021819           80 ----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        80 ----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                          ++|+||||||.....    ...+++.+.+++|+.++.++++++..    .+.++||++||..+..+.+..      
T Consensus        99 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~------  172 (271)
T 4ibo_A           99 EQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATV------  172 (271)
T ss_dssp             HHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTC------
T ss_pred             HHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCc------
Confidence                689999999976532    23445688999999999999887743    456799999998775554442      


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCc
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (307)
                                    ..|+.+|...+.+.+.++.+   .|+++++++||.|.++...... ....+........+      
T Consensus       173 --------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p------  231 (271)
T 4ibo_A          173 --------------APYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALI-DNPEFDAWVKARTP------  231 (271)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH-HCHHHHHHHHHHST------
T ss_pred             --------------hhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcc-cCHHHHHHHHhcCC------
Confidence                          57999999999999888776   5899999999999987532210 00122222222222      


Q ss_pred             ccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          225 WLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                      ...+.+++|+|+++++++...  ...|..+..+++
T Consensus       232 ~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG  266 (271)
T 4ibo_A          232 AKRWGKPQELVGTAVFLSASASDYVNGQIIYVDGG  266 (271)
T ss_dssp             TCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCcCHHHHHHHHHHHhCccccCCCCcEEEECCC
Confidence            345789999999999988643  345765443333

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.95  E-value=6.4e-28  Score=205.28  Aligned_cols=234  Identities=18%  Similarity=0.123  Sum_probs=164.2

Q ss_pred             cccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC---------Ccccc---c-CCCCCCCceEEEEcccCCh
Q 021819            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD---------SSHLF---A-LPGAGDANLRVFEADVLDS   71 (307)
Q Consensus         5 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~---------~~~~~---~-~~~~~~~~~~~i~~D~~d~   71 (307)
                      ..+++|+++||||+|+||+++++.|+++|+ +|++++|+...         .+.+.   . +.... .++.++++|++|+
T Consensus         9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~   86 (278)
T 3sx2_A            9 GPLTGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG-SRIVARQADVRDR   86 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT-CCEEEEECCTTCH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcC-CeEEEEeCCCCCH
Confidence            346789999999999999999999999999 89999886321         11111   0 00011 2789999999999


Q ss_pred             hHHHHHhc-------CccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHh----cC-CcEEEEecCcceeccCC
Q 021819           72 GAVSRAVE-------GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNP  139 (307)
Q Consensus        72 ~~~~~~~~-------~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~iSS~~~~~~~~  139 (307)
                      ++++++++       ++|++|||||........+++.+.+++|+.++.++++++..    .+ .++||++||..+..+..
T Consensus        87 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  166 (278)
T 3sx2_A           87 ESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVG  166 (278)
T ss_dssp             HHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCc
Confidence            99988876       78999999998765444566789999999999999998743    23 47899999977654431


Q ss_pred             CCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHH-Hc
Q 021819          140 GWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQL-LQ  215 (307)
Q Consensus       140 ~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~-~~  215 (307)
                      ..           .+..     ..|+.+|...+.+.+.++.+.   |+++++++||.|.++.....  .....+... ..
T Consensus       167 ~~-----------~~~~-----~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~  228 (278)
T 3sx2_A          167 SA-----------DPGS-----VGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNE--FTREWLAKMAAA  228 (278)
T ss_dssp             CS-----------SHHH-----HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSH--HHHHHHHHHHHH
T ss_pred             cC-----------CCCc-----hHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhh--hHHHHHhhccch
Confidence            10           1111     469999999999998887664   79999999999999875432  111122111 11


Q ss_pred             CCC-CCCC-CcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCcc
Q 021819          216 GSK-DTQE-YHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIY  258 (307)
Q Consensus       216 ~~~-~~~~-~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~  258 (307)
                      ... .... .....+++++|+|+++++++...  ...|..+..++++
T Consensus       229 ~~~~~~~~~~~p~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~  275 (278)
T 3sx2_A          229 TDTPGAMGNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGF  275 (278)
T ss_dssp             CC--CTTSCSSSCSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             hhhhhhhhhhcCcCcCCHHHHHHHHHHHhCcccccccCCEEeECCCc
Confidence            111 1111 12267889999999999988643  3457654444443

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.95  E-value=9.2e-28  Score=204.32  Aligned_cols=225  Identities=17%  Similarity=0.192  Sum_probs=150.3

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC-CCCcccc-cCCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~-~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++++|+. +..+... .+.... .++.++++|++|+++++++++    
T Consensus        26 ~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~  103 (280)
T 4da9_A           26 QKARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLG-ARVIFLRADLADLSSHQATVDAVVA  103 (280)
T ss_dssp             CCCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTT-CCEEEEECCTTSGGGHHHHHHHHHH
T ss_pred             ccCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHH
Confidence            45678999999999999999999999999 898888643 2222211 111111 278899999999999888876    


Q ss_pred             ---CccEEEEeccCCCC------CCCCChhhhhhhhhHHHHHHHHHHHHhc----C---CcEEEEecCcceeccCCCCCC
Q 021819           80 ---GCKGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAAKRF----G---VRRVVVTSSISAIVPNPGWKG  143 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~---~~~~v~iSS~~~~~~~~~~~~  143 (307)
                         ++|++|||||....      +...+++.+.+++|+.++.++++++...    +   .++||++||..+..+.+..  
T Consensus       104 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~--  181 (280)
T 4da9_A          104 EFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPER--  181 (280)
T ss_dssp             HHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CC--
T ss_pred             HcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCc--
Confidence               78999999997321      1234567899999999999999887443    2   4689999998876554442  


Q ss_pred             cccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCC
Q 021819          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT  220 (307)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  220 (307)
                                        ..|+.+|...+.+.+.++.+   .|+++++++||.|.++.......   ........+.   
T Consensus       182 ------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~---  237 (280)
T 4da9_A          182 ------------------LDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSG---KYDGLIESGL---  237 (280)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------
T ss_pred             ------------------cHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcch---hHHHHHhhcC---
Confidence                              56999999999999888876   58999999999999886543211   1111111100   


Q ss_pred             CCCcccCcccHHHHHHHHHHhhcCCC--CCceEEecCCcccH
Q 021819          221 QEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQF  260 (307)
Q Consensus       221 ~~~~~~~~i~~~dva~~~~~~~~~~~--~~g~~~~~~~~~~~  260 (307)
                        .....+.+++|+|+++++++....  ..|..+..|+++++
T Consensus       238 --~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  277 (280)
T 4da9_A          238 --VPMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLSI  277 (280)
T ss_dssp             ------CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTTCC-
T ss_pred             --CCcCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCCccc
Confidence              123457899999999999987654  45765555555543

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.95  E-value=8.4e-28  Score=202.22  Aligned_cols=220  Identities=16%  Similarity=0.165  Sum_probs=161.3

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCC-CCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP-GSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~-~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      .+++|+++||||+|+||++++++|+++|+ +|++++|+ ....+.+.. +..... ++.++.+|++|+++++++++    
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~   81 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGA-KVGLHGRKAPANIDETIASMRADGG-DAAFFAADLATSEACQQLVDEFVA   81 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCCTTHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECCCchhhHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHH
Confidence            45678999999999999999999999999 89999997 544333221 111111 68899999999999988887    


Q ss_pred             ---CccEEEEeccC-CCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cC--C---cEEEEecCcceec-cCCCC
Q 021819           80 ---GCKGVFHVASP-CTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FG--V---RRVVVTSSISAIV-PNPGW  141 (307)
Q Consensus        80 ---~~d~vi~~a~~-~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~---~~~v~iSS~~~~~-~~~~~  141 (307)
                         ++|+||||||. ....    ...+.+...+++|+.++.++++++.+    .+  .   ++||++||..+.. +.+. 
T Consensus        82 ~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-  160 (258)
T 3afn_B           82 KFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPG-  160 (258)
T ss_dssp             HHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTT-
T ss_pred             HcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCC-
Confidence               79999999997 3221    12234578899999999999987743    22  2   6899999976543 2222 


Q ss_pred             CCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCC
Q 021819          142 KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK  218 (307)
Q Consensus       142 ~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~  218 (307)
                                         ...|+.+|.+.+.+.+.++.+.   +++++++|||.++++.....   ...+......+.+
T Consensus       161 -------------------~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~  218 (258)
T 3afn_B          161 -------------------AGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK---TQDVRDRISNGIP  218 (258)
T ss_dssp             -------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC---CHHHHHHHHTTCT
T ss_pred             -------------------chHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc---CHHHHHHHhccCC
Confidence                               1579999999999998887664   89999999999999875432   2233334443332


Q ss_pred             CCCCCcccCcccHHHHHHHHHHhhcCC---CCCce-EEecCC
Q 021819          219 DTQEYHWLGAVPVKDVAKAQVLLFESP---AASGR-YLCTNG  256 (307)
Q Consensus       219 ~~~~~~~~~~i~~~dva~~~~~~~~~~---~~~g~-~~~~~~  256 (307)
                            ...+++++|+|+++++++..+   ...|. |++.++
T Consensus       219 ------~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg  254 (258)
T 3afn_B          219 ------MGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGG  254 (258)
T ss_dssp             ------TCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTT
T ss_pred             ------CCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCC
Confidence                  346899999999999998754   23464 566554

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.95  E-value=3e-27  Score=197.56  Aligned_cols=220  Identities=15%  Similarity=0.094  Sum_probs=159.6

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc---Ccc
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GCK   82 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~---~~d   82 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+..+    . ++.++.+|++|+++++++++   ++|
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~----~-~~~~~~~D~~~~~~~~~~~~~~~~id   76 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKY----P-GIQTRVLDVTKKKQIDQFANEVERLD   76 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGS----T-TEEEEECCTTCHHHHHHHHHHCSCCS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhc----c-CceEEEeeCCCHHHHHHHHHHhCCCC
Confidence            34578999999999999999999999999 999999976544433322    1 68899999999998887653   789


Q ss_pred             EEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCC-CCCCcccccCCCCc
Q 021819           83 GVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNP-GWKGKVFDETSWTD  153 (307)
Q Consensus        83 ~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~-~~~~~~~~E~~~~~  153 (307)
                      +||||||.....    ...+++...+++|+.++.++++++.    +.+.++||++||..+..+.+ .             
T Consensus        77 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------------  143 (246)
T 2ag5_A           77 VLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVN-------------  143 (246)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTT-------------
T ss_pred             EEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCC-------------
Confidence            999999976532    2234567889999999999999875    34668999999976644332 1             


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCC---cchHHHHHHHHcCCCCCCCCcccC
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYL---NASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                             ...|+.+|...+.+.+.++.+.   |++++++|||.|+++......   ..............+      ...
T Consensus       144 -------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~------~~~  210 (246)
T 2ag5_A          144 -------RCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQK------TGR  210 (246)
T ss_dssp             -------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCT------TSS
T ss_pred             -------CccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCC------CCC
Confidence                   1569999999999998887663   899999999999997532100   000112222222221      235


Q ss_pred             cccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          228 AVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                      +.+++|+|+++++++..+  ...|..+..+++
T Consensus       211 ~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdgG  242 (246)
T 2ag5_A          211 FATAEEIAMLCVYLASDESAYVTGNPVIIDGG  242 (246)
T ss_dssp             CEEHHHHHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             CCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            789999999999998643  345665444443

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.95  E-value=2e-27  Score=201.66  Aligned_cols=223  Identities=15%  Similarity=0.124  Sum_probs=156.3

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHh-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAV-------   78 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~-------   78 (307)
                      +++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.... +..... ++.++.+|++|++++++++       
T Consensus        19 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~   96 (273)
T 1ae1_A           19 LKGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGL-NVEGSVCDLLSRTERDKLMQTVAHVF   96 (273)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999 89999997644332211 111111 6889999999999888877       


Q ss_pred             -cCccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccC
Q 021819           79 -EGCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        79 -~~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                       .++|++|||||.....    ...+++...+++|+.++.++++++.    +.+.++||++||..+..+.+..        
T Consensus        97 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~--------  168 (273)
T 1ae1_A           97 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSV--------  168 (273)
T ss_dssp             TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTC--------
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCc--------
Confidence             4689999999976432    2234567889999999999999883    4456899999997765443332        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcc---hHHHHHHHHcCCCCCCCC
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNA---SCAVLQQLLQGSKDTQEY  223 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~  223 (307)
                                  ..|+.+|...+.+.+.++.+.   |+++++++||.|+++........   ............+     
T Consensus       169 ------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p-----  231 (273)
T 1ae1_A          169 ------------SLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTP-----  231 (273)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHST-----
T ss_pred             ------------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCC-----
Confidence                        579999999999998887664   89999999999999864322110   1122222222211     


Q ss_pred             cccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          224 HWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       224 ~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                       ...+.+++|+|+++++++...  ...|..+..+++
T Consensus       232 -~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  266 (273)
T 1ae1_A          232 -MGRAGKPQEVSALIAFLCFPAASYITGQIIWADGG  266 (273)
T ss_dssp             -TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -CCCCcCHHHHHHHHHHHhCccccCcCCCEEEECCC
Confidence             235789999999999988643  234665444443

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.95  E-value=9.6e-27  Score=192.62  Aligned_cols=214  Identities=16%  Similarity=0.104  Sum_probs=158.9

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------Cc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~~   81 (307)
                      .|+||||||+++||+++++.|+++|+ +|++.+|+.+....+...   .. ++..+++|++|+++++++++       ++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~---~~-~~~~~~~Dv~~~~~v~~~v~~~~~~~g~i   76 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAKE---RP-NLFYFHGDVADPLTLKKFVEYAMEKLQRI   76 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTT---CT-TEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHh---cC-CEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            37999999999999999999999999 899999976554443332   22 78899999999999888775       68


Q ss_pred             cEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHhc---CCcEEEEecCcceeccCCCCCCcccccCCCCch
Q 021819           82 KGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (307)
Q Consensus        82 d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~  154 (307)
                      |++|||||....    +...+++++.+++|+.++.++.+++.++   +.+++|++||..+..+.+..             
T Consensus        77 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~~-------------  143 (247)
T 3ged_A           77 DVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPDS-------------  143 (247)
T ss_dssp             CEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTTC-------------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCCC-------------
Confidence            999999997654    3344567999999999999998887432   23789999998876655543             


Q ss_pred             hhhcccCccHHHHHHHHHHHHHHHHHhc--CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHH
Q 021819          155 EYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK  232 (307)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  232 (307)
                             ..|+.+|.....+.+.++.+.  ++++++|.||.|.++.....   .    ++.....|      ...+..++
T Consensus       144 -------~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~~---~----~~~~~~~P------l~R~g~pe  203 (247)
T 3ged_A          144 -------EAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEF---T----QEDCAAIP------AGKVGTPK  203 (247)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---C---C----HHHHHTST------TSSCBCHH
T ss_pred             -------HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHHH---H----HHHHhcCC------CCCCcCHH
Confidence                   346666666666665555443  89999999999987764332   1    12222222      23467999


Q ss_pred             HHHHHHHHhhcCCCCCceEEecCCcccH
Q 021819          233 DVAKAQVLLFESPAASGRYLCTNGIYQF  260 (307)
Q Consensus       233 dva~~~~~~~~~~~~~g~~~~~~~~~~~  260 (307)
                      |+|+++++++.+....|..+..|++++.
T Consensus       204 diA~~v~fL~s~~~iTG~~i~VDGG~s~  231 (247)
T 3ged_A          204 DISNMVLFLCQQDFITGETIIVDGGMSK  231 (247)
T ss_dssp             HHHHHHHHHHHCSSCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHhCCCCCCCeEEECcCHHH
Confidence            9999999999876667887777777653

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.95  E-value=2.1e-27  Score=198.64  Aligned_cols=218  Identities=16%  Similarity=0.102  Sum_probs=148.2

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEE-eCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      +++|+++||||+|+||++++++|+++|+ +|+++ .|++...+.+.. +..... ++.++.+|++|+++++++++     
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~-~V~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGA-NIVLNGSPASTSLDATAEEFKAAGI-NVVVAKGDVKNPEDVENMVKTAMDA   80 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECTTCSHHHHHHHHHHHTTC-CEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCcCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHh
Confidence            4578999999999999999999999999 88888 555443322211 111111 68899999999999988876     


Q ss_pred             --CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                        ++|+||||||....    ....+++.+.+++|+.++.++++++.+    .+.++||++||..+.++.+..        
T Consensus        81 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--------  152 (247)
T 2hq1_A           81 FGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQ--------  152 (247)
T ss_dssp             HSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------C--------
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCC--------
Confidence              78999999997643    123455688999999999988888753    467899999997766654332        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                                  ..|+.+|...+.+.+.++.+.   ++++++++||.+.++.....   ..........+.+      ..
T Consensus       153 ------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~------~~  211 (247)
T 2hq1_A          153 ------------ANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVL---PDKVKEMYLNNIP------LK  211 (247)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---CHHHHHHHHTTST------TS
T ss_pred             ------------cHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhc---chHHHHHHHhhCC------CC
Confidence                        579999999999998887664   89999999999987643221   1122222333222      34


Q ss_pred             CcccHHHHHHHHHHhhcCC--CCCc-eEEecC
Q 021819          227 GAVPVKDVAKAQVLLFESP--AASG-RYLCTN  255 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~--~~~g-~~~~~~  255 (307)
                      .+++++|+|+++++++..+  ...| .+++.+
T Consensus       212 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  243 (247)
T 2hq1_A          212 RFGTPEEVANVVGFLASDDSNYITGQVINIDG  243 (247)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCHHHHHHHHHHHcCcccccccCcEEEeCC
Confidence            5789999999999988653  2345 466554

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.95  E-value=1.7e-27  Score=201.15  Aligned_cols=217  Identities=18%  Similarity=0.132  Sum_probs=157.2

Q ss_pred             ccccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--
Q 021819            2 ASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (307)
Q Consensus         2 ~~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--   79 (307)
                      .+|+.+++|+++||||+|+||+++++.|+++|+ +|++.+|+......           ...+++|++|.+++.++++  
T Consensus        21 ~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~-----------~~~~~~Dv~~~~~~~~~~~~~   88 (266)
T 3uxy_A           21 QSMQGFEGKVALVTGAAGGIGGAVVTALRAAGA-RVAVADRAVAGIAA-----------DLHLPGDLREAAYADGLPGAV   88 (266)
T ss_dssp             -----CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECSSCCTTSCC-----------SEECCCCTTSHHHHHHHHHHH
T ss_pred             hhhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHh-----------hhccCcCCCCHHHHHHHHHHH
Confidence            346667789999999999999999999999999 89999987554322           2344789999988877665  


Q ss_pred             -----CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCccc
Q 021819           80 -----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVF  146 (307)
Q Consensus        80 -----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~  146 (307)
                           ++|++|||||.....    ...+++++.+++|+.++.++++++    ++.+.++||++||..+..+.+..     
T Consensus        89 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-----  163 (266)
T 3uxy_A           89 AAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGH-----  163 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTB-----
T ss_pred             HHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCC-----
Confidence                 689999999986542    234456889999999999999998    55567899999997765544332     


Q ss_pred             ccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCC----CcchHHHHHHHHcCCCC
Q 021819          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPY----LNASCAVLQQLLQGSKD  219 (307)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~  219 (307)
                                     ..|+.+|...+.+.+.++.+.   |+++++++||.|.++.....    ...............  
T Consensus       164 ---------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~--  226 (266)
T 3uxy_A          164 ---------------ALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTV--  226 (266)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTS--
T ss_pred             ---------------hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcC--
Confidence                           579999999999998887764   89999999999988742210    000111122222222  


Q ss_pred             CCCCcccCcccHHHHHHHHHHhhcCCC--CCceEEecCC
Q 021819          220 TQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNG  256 (307)
Q Consensus       220 ~~~~~~~~~i~~~dva~~~~~~~~~~~--~~g~~~~~~~  256 (307)
                          ....+.+++|+|+++++++....  ..|..+..++
T Consensus       227 ----p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG  261 (266)
T 3uxy_A          227 ----PLGRIAEPEDIADVVLFLASDAARYLCGSLVEVNG  261 (266)
T ss_dssp             ----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             ----CCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECc
Confidence                23567899999999999987543  4466443333

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.95  E-value=7.5e-28  Score=198.32  Aligned_cols=232  Identities=20%  Similarity=0.129  Sum_probs=161.6

Q ss_pred             CccccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-
Q 021819            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (307)
Q Consensus         1 m~~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-   79 (307)
                      |.+..++++|+++||||+++||+++++.|.++|+ +|++.+|+..+ +....+...+. ++..+++|++|+++++++++ 
T Consensus         1 M~n~f~L~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~~-~~~~~~~~~g~-~~~~~~~Dv~d~~~v~~~~~~   77 (247)
T 4hp8_A            1 MKNPFSLEGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAPD-ETLDIIAKDGG-NASALLIDFADPLAAKDSFTD   77 (247)
T ss_dssp             --CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCCH-HHHHHHHHTTC-CEEEEECCTTSTTTTTTSSTT
T ss_pred             CcCCcCCCCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcHH-HHHHHHHHhCC-cEEEEEccCCCHHHHHHHHHh
Confidence            5666678899999999999999999999999999 89988987542 12222212222 78899999999998887775 


Q ss_pred             -CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHH----hcC-CcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 -GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFG-VRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                       ++|++|||||....    +...++|++.+++|+.|+..+.+++.    +++ .++||++||+.+..+.+..        
T Consensus        78 g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~--------  149 (247)
T 4hp8_A           78 AGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRV--------  149 (247)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSC--------
T ss_pred             CCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCC--------
Confidence             58999999997654    23455689999999999999888763    333 4799999998876655543        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcc
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (307)
                          +.|..+|...-+++|.++.++.     ++||++++|.||.|.+|...... ......+.+....|      ...+.
T Consensus       150 ----~~Y~asKaav~~ltr~lA~Ela-----~~gIrVNaV~PG~i~T~~~~~~~-~~~~~~~~~~~~~P------lgR~g  213 (247)
T 4hp8_A          150 ----PSYTAAKHGVAGLTKLLANEWA-----AKGINVNAIAPGYIETNNTEALR-ADAARNKAILERIP------AGRWG  213 (247)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHHG-----GGTEEEEEEEECSBCSGGGHHHH-TSHHHHHHHHTTCT------TSSCB
T ss_pred             ----hHHHHHHHHHHHHHHHHHHHHh-----hcCeEEEEEeeCCCCCcchhhcc-cCHHHHHHHHhCCC------CCCCc
Confidence                4444444444444444444443     46999999999999887543210 01122233333322      34467


Q ss_pred             cHHHHHHHHHHhhcCC--CCCceEEecCCccc
Q 021819          230 PVKDVAKAQVLLFESP--AASGRYLCTNGIYQ  259 (307)
Q Consensus       230 ~~~dva~~~~~~~~~~--~~~g~~~~~~~~~~  259 (307)
                      .++|+|.++++++...  ...|..+..|++++
T Consensus       214 ~peeiA~~v~fLaSd~a~~iTG~~i~VDGG~~  245 (247)
T 4hp8_A          214 HSEDIAGAAVFLSSAAADYVHGAILNVDGGWL  245 (247)
T ss_dssp             CTHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             CHHHHHHHHHHHhCchhcCCcCCeEEECcccc
Confidence            8999999988887533  34577777776654

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.95  E-value=9e-28  Score=204.18  Aligned_cols=224  Identities=16%  Similarity=0.083  Sum_probs=160.1

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCCCCCceEEEEcccCChhHHHHHhc---
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~---   79 (307)
                      |+.+++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+. .+..... ++.++.+|++|+++++++++   
T Consensus        17 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~   94 (277)
T 2rhc_B           17 MATQDSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGV-EADGRTCDVRSVPEIEALVAAVV   94 (277)
T ss_dssp             TCCTTSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHH
Confidence            4445678999999999999999999999999 8999999765433221 1111111 68899999999999888776   


Q ss_pred             ----CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc------CCcEEEEecCcceeccCCCCCCcc
Q 021819           80 ----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF------GVRRVVVTSSISAIVPNPGWKGKV  145 (307)
Q Consensus        80 ----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~v~iSS~~~~~~~~~~~~~~  145 (307)
                          ++|+||||||.....    ...+++.+.+++|+.++.++++++.+.      +.++||++||..+..+.+..    
T Consensus        95 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~----  170 (277)
T 2rhc_B           95 ERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHA----  170 (277)
T ss_dssp             HHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTC----
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCC----
Confidence                689999999975432    223356789999999999999997654      56799999997765543332    


Q ss_pred             cccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcc--h------HHHHHHHH
Q 021819          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNA--S------CAVLQQLL  214 (307)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~--~------~~~~~~~~  214 (307)
                                      ..|+.+|...+.+.+.++.+   .|+++++++||.|.++........  .      ........
T Consensus       171 ----------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (277)
T 2rhc_B          171 ----------------APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRIT  234 (277)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred             ----------------ccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHH
Confidence                            57999999999999888766   489999999999988742210000  0      01111111


Q ss_pred             cCCCCCCCCcccCcccHHHHHHHHHHhhcCC--CCCce-EEecC
Q 021819          215 QGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGR-YLCTN  255 (307)
Q Consensus       215 ~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~-~~~~~  255 (307)
                      ...      ....+++++|+|+++++++..+  ...|. +++.+
T Consensus       235 ~~~------p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdG  272 (277)
T 2rhc_B          235 ARV------PIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCG  272 (277)
T ss_dssp             HHS------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hcC------CCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECC
Confidence            111      2345889999999999998754  23465 44443

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.95  E-value=1.6e-27  Score=201.02  Aligned_cols=222  Identities=15%  Similarity=0.112  Sum_probs=157.6

Q ss_pred             cccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeC-CCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc---
Q 021819            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE---   79 (307)
Q Consensus         5 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r-~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~---   79 (307)
                      ..+++|+|+||||+|+||++++++|+++|+ +|++++| +.+..+.+.. +..... ++.++.+|++|++++.++++   
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~   80 (261)
T 1gee_A            3 KDLEGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGG-EAIAVKGDVTVESDVINLVQSAI   80 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHH
Confidence            345678999999999999999999999999 8999998 5433222211 111111 67889999999999888876   


Q ss_pred             ----CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cC-CcEEEEecCcceeccCCCCCCccc
Q 021819           80 ----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVF  146 (307)
Q Consensus        80 ----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~iSS~~~~~~~~~~~~~~~  146 (307)
                          ++|+||||||.....    ...+++.+.+++|+.++.++++++.+    .+ .++||++||..+..+.+..     
T Consensus        81 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-----  155 (261)
T 1gee_A           81 KEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLF-----  155 (261)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTC-----
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCc-----
Confidence                789999999976431    22345678999999999998888744    34 5799999997664332221     


Q ss_pred             ccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCC
Q 021819          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (307)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (307)
                                     ..|+.+|.+.+.+.+.++.+.   +++++++|||.|+++...... .............+     
T Consensus       156 ---------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~-----  214 (261)
T 1gee_A          156 ---------------VHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKF-ADPEQRADVESMIP-----  214 (261)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHH-HSHHHHHHHHTTCT-----
T ss_pred             ---------------cHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcc-cChhHHHHHHhcCC-----
Confidence                           579999999999988877654   899999999999998642110 01122222222211     


Q ss_pred             cccCcccHHHHHHHHHHhhcCC--CCCceEEecC
Q 021819          224 HWLGAVPVKDVAKAQVLLFESP--AASGRYLCTN  255 (307)
Q Consensus       224 ~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~  255 (307)
                       ...+++++|+|+++++++...  ...|.++..+
T Consensus       215 -~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~  247 (261)
T 1gee_A          215 -MGYIGEPEEIAAVAAWLASSEASYVTGITLFAD  247 (261)
T ss_dssp             -TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             -CCCCcCHHHHHHHHHHHhCccccCCCCcEEEEc
Confidence             245789999999999988643  3346544333

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.95  E-value=2.3e-27  Score=199.83  Aligned_cols=211  Identities=16%  Similarity=0.178  Sum_probs=156.2

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +++|+++||||+|+||++++++|+++|+ +|++++|+.+..+.+.....  . ++.++++|++|++++.++++       
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~-~~~~~~~D~~~~~~v~~~~~~~~~~~g   80 (260)
T 1nff_A            5 LTGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELA--D-AARYVHLDVTQPAQWKAAVDTAVTAFG   80 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTG--G-GEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhh--c-CceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4578999999999999999999999999 89999997654433221111  1 57889999999999988887       


Q ss_pred             CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                      ++|+||||||.....    ...+++.+.+++|+.++.++++++    ++.+.++||++||..+..+.+..          
T Consensus        81 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  150 (260)
T 1nff_A           81 GLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVAC----------  150 (260)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTB----------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCc----------
Confidence            799999999976432    223456789999999997666655    45567899999997765443321          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (307)
                                ..|+.+|...+.+.+.++.+   .|++++++|||.|+++... ...           .. .. ......+
T Consensus       151 ----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~~~-----------~~-~~-~~~~~~~  206 (260)
T 1nff_A          151 ----------HGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-WVP-----------ED-IF-QTALGRA  206 (260)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-TSC-----------TT-CS-CCSSSSC
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-cch-----------hh-HH-hCccCCC
Confidence                      57999999999999888766   5999999999999998643 100           00 00 1123457


Q ss_pred             ccHHHHHHHHHHhhcCCC--CCce-EEecC
Q 021819          229 VPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (307)
Q Consensus       229 i~~~dva~~~~~~~~~~~--~~g~-~~~~~  255 (307)
                      .+++|+|+++++++..+.  ..|. +++.+
T Consensus       207 ~~~~dvA~~v~~l~s~~~~~~~G~~~~v~g  236 (260)
T 1nff_A          207 AEPVEVSNLVVYLASDESSYSTGAEFVVDG  236 (260)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCHHHHHHHHHHHhCccccCCcCCEEEECC
Confidence            899999999999986532  3465 44444

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.95  E-value=1.6e-27  Score=201.38  Aligned_cols=220  Identities=14%  Similarity=0.062  Sum_probs=159.7

Q ss_pred             cCCcEEEEeCCc--hhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            7 KEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         7 ~~~~~ilItGat--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      +++|+++||||+  |+||+++++.|+++|+ +|++++|+....+.+..+..... ...++++|++|+++++++++     
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLG-SDIVLQCDVAEDASIDTMFAELGKV   84 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcC-CcEEEEccCCCHHHHHHHHHHHHHH
Confidence            567899999999  9999999999999999 89999997622222222111111 34688999999999888876     


Q ss_pred             --CccEEEEeccCCCC--------C-CCCChhhhhhhhhHHHHHHHHHHHHhcC--CcEEEEecCcceeccCCCCCCccc
Q 021819           80 --GCKGVFHVASPCTL--------E-DPVDPEKELILPAVQGTLNVLEAAKRFG--VRRVVVTSSISAIVPNPGWKGKVF  146 (307)
Q Consensus        80 --~~d~vi~~a~~~~~--------~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~iSS~~~~~~~~~~~~~~~  146 (307)
                        ++|+||||||....        . ...+++...+++|+.++.++++++.+.-  .++||++||..+..+.+..     
T Consensus        85 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----  159 (265)
T 1qsg_A           85 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNY-----  159 (265)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTT-----
T ss_pred             cCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCCCc-----
Confidence              67999999997642        1 3344568899999999999999997752  2589999997765443332     


Q ss_pred             ccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCC
Q 021819          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (307)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (307)
                                     ..|+.+|...+.+.+.++.+.   |+++++++||.|+++...... .............+     
T Consensus       160 ---------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~p-----  218 (265)
T 1qsg_A          160 ---------------NVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK-DFRKMLAHCEAVTP-----  218 (265)
T ss_dssp             ---------------THHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGST-THHHHHHHHHHHST-----
T ss_pred             ---------------hHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhccc-ccHHHHHHHHhcCC-----
Confidence                           579999999999999887764   899999999999998754321 12223333322222     


Q ss_pred             cccCcccHHHHHHHHHHhhcCCC--CCceE-EecC
Q 021819          224 HWLGAVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (307)
Q Consensus       224 ~~~~~i~~~dva~~~~~~~~~~~--~~g~~-~~~~  255 (307)
                       ...+.+++|+|+++++++....  ..|.. ++.+
T Consensus       219 -~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdg  252 (265)
T 1qsg_A          219 -IRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDG  252 (265)
T ss_dssp             -TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             -CCCCCCHHHHHHHHHHHhCchhcCccCCEEEECC
Confidence             2346799999999999886432  34654 4443

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.95  E-value=8e-27  Score=194.37  Aligned_cols=206  Identities=22%  Similarity=0.157  Sum_probs=157.1

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------Ccc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------GCK   82 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------~~d   82 (307)
                      +|+++||||+|+||++++++|+++|+ +|++++|+.. .   .        ++.++.+|++|++++.++++      ++|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~-~---~--------~~~~~~~D~~~~~~~~~~~~~~~~~~~~d   68 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGY-RVVVLDLRRE-G---E--------DLIYVEGDVTREEDVRRAVARAQEEAPLF   68 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCC-S---S--------SSEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEccCcc-c---c--------ceEEEeCCCCCHHHHHHHHHHHHhhCCce
Confidence            47999999999999999999999999 8999998764 1   1        45789999999999998887      789


Q ss_pred             EEEEeccCCCCCCC----CC----hhhhhhhhhHHHHHHHHHHHHhc----C------CcEEEEecCcceeccCCCCCCc
Q 021819           83 GVFHVASPCTLEDP----VD----PEKELILPAVQGTLNVLEAAKRF----G------VRRVVVTSSISAIVPNPGWKGK  144 (307)
Q Consensus        83 ~vi~~a~~~~~~~~----~~----~~~~~~~~n~~~~~~l~~~~~~~----~------~~~~v~iSS~~~~~~~~~~~~~  144 (307)
                      ++|||||.......    .+    ++.+.+++|+.++.++++++.+.    +      .++||++||..+..+.+..   
T Consensus        69 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~---  145 (242)
T 1uay_A           69 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQ---  145 (242)
T ss_dssp             EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTC---
T ss_pred             EEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCC---
Confidence            99999997654211    11    56889999999999999998653    1      1389999998765543332   


Q ss_pred             ccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC
Q 021819          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ  221 (307)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  221 (307)
                                       ..|+.+|...+.+.+.++.+.   +++++++|||.|+|+.....   ...+........+.  
T Consensus       146 -----------------~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~~--  203 (242)
T 1uay_A          146 -----------------AAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL---PEKAKASLAAQVPF--  203 (242)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS---CHHHHHHHHTTCCS--
T ss_pred             -----------------chhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhcc---chhHHHHHHhhCCC--
Confidence                             579999999999988877663   89999999999999864332   12223333333221  


Q ss_pred             CCcccCcccHHHHHHHHHHhhcCCCCCce-EEecC
Q 021819          222 EYHWLGAVPVKDVAKAQVLLFESPAASGR-YLCTN  255 (307)
Q Consensus       222 ~~~~~~~i~~~dva~~~~~~~~~~~~~g~-~~~~~  255 (307)
                         ...+++++|+|+++++++.++...|. +++.+
T Consensus       204 ---~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~g  235 (242)
T 1uay_A          204 ---PPRLGRPEEYAALVLHILENPMLNGEVVRLDG  235 (242)
T ss_dssp             ---SCSCCCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             ---cccCCCHHHHHHHHHHHhcCCCCCCcEEEEcC
Confidence               14578999999999999988555675 44543

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.95  E-value=4.9e-28  Score=203.21  Aligned_cols=227  Identities=16%  Similarity=0.101  Sum_probs=156.0

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc----CccEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----GCKGV   84 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----~~d~v   84 (307)
                      ||+|+||||+||||++++++|+++|+ +|++++|+++..+.             .+.+|++|+++++++++    ++|+|
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-------------~~~~D~~~~~~~~~~~~~~~~~~d~v   66 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAGH-TVIGIDRGQADIEA-------------DLSTPGGRETAVAAVLDRCGGVLDGL   66 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC-------------CTTSHHHHHHHHHHHHHHHTTCCSEE
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCChhHccc-------------cccCCcccHHHHHHHHHHcCCCccEE
Confidence            46899999999999999999999999 99999997654321             14589999999988886    89999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhc----CCcEEEEecCcceeccCCCCCCcccccC-------CCCc
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGKVFDET-------SWTD  153 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~iSS~~~~~~~~~~~~~~~~E~-------~~~~  153 (307)
                      |||||....   ..++...+++|+.++.++++++.+.    +.++||++||..++.+....  .+..|.       .+..
T Consensus        67 i~~Ag~~~~---~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--~~~~~~~~~~~~~~~~~  141 (255)
T 2dkn_A           67 VCCAGVGVT---AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAE--LPMVEAMLAGDEARAIE  141 (255)
T ss_dssp             EECCCCCTT---SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGG--CHHHHHHHHTCHHHHHH
T ss_pred             EECCCCCCc---chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccc--cchhhhhcccchhhhhh
Confidence            999997542   3457899999999999999988654    56899999997765432111  111111       0000


Q ss_pred             h-hhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcc
Q 021819          154 L-EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (307)
Q Consensus       154 ~-~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (307)
                      . .........|+.+|.+.|.+++.++++   .+++++++||+.|+|+........  ..........   .+ ...+++
T Consensus       142 ~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~--~~~~~~~~~~---~~-~~~~~~  215 (255)
T 2dkn_A          142 LAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKAD--PRYGESTRRF---VA-PLGRGS  215 (255)
T ss_dssp             HHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHC--TTTHHHHHSC---CC-TTSSCB
T ss_pred             hccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccc--hhhHHHHHHH---HH-HhcCCC
Confidence            0 000011257999999999999887766   699999999999998753210000  0000111100   01 345789


Q ss_pred             cHHHHHHHHHHhhcCC--CCCc-eEEecCC-cccH
Q 021819          230 PVKDVAKAQVLLFESP--AASG-RYLCTNG-IYQF  260 (307)
Q Consensus       230 ~~~dva~~~~~~~~~~--~~~g-~~~~~~~-~~~~  260 (307)
                      +++|+|+++++++..+  ...| .|++.++ ..++
T Consensus       216 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~  250 (255)
T 2dkn_A          216 EPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALM  250 (255)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHH
T ss_pred             CHHHHHHHHHHHhCCCcccceeeEEEecCCeEeee
Confidence            9999999999999865  3445 4666543 3443

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.95  E-value=4.1e-27  Score=196.83  Aligned_cols=220  Identities=15%  Similarity=0.092  Sum_probs=163.3

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +++|+++||||+|+||+++++.|+++|+ +|++++|+....+.+.........++.++.+|++|+++++++++       
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (247)
T 3lyl_A            3 LNEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL   81 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4578999999999999999999999999 89999997655433322111111278899999999999888775       


Q ss_pred             CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                      ++|+||||||.....    ...+++...+++|+.++.++++++..    .+.++||++||..+..+.+..          
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  151 (247)
T 3lyl_A           82 AIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQ----------  151 (247)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC----------
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCc----------
Confidence            479999999986542    23345688999999999999998743    455799999998776654442          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (307)
                                ..|+.+|...+.+.+.++.+   .++++++++||.|.++......   ...........      ....+
T Consensus       152 ----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~------~~~~~  212 (247)
T 3lyl_A          152 ----------TNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLT---DEQKSFIATKI------PSGQI  212 (247)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSC---HHHHHHHHTTS------TTCCC
T ss_pred             ----------HHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhcc---HHHHHHHhhcC------CCCCC
Confidence                      57999999999988888765   4899999999999998765432   22222222222      24567


Q ss_pred             ccHHHHHHHHHHhhcCC--CCCceEEecCC
Q 021819          229 VPVKDVAKAQVLLFESP--AASGRYLCTNG  256 (307)
Q Consensus       229 i~~~dva~~~~~~~~~~--~~~g~~~~~~~  256 (307)
                      .+++|+|+++++++...  ...|..+..++
T Consensus       213 ~~~~dva~~i~~l~s~~~~~~tG~~i~vdg  242 (247)
T 3lyl_A          213 GEPKDIAAAVAFLASEEAKYITGQTLHVNG  242 (247)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cCHHHHHHHHHHHhCCCcCCccCCEEEECC
Confidence            89999999999988643  33465443333

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.95  E-value=3.4e-27  Score=204.38  Aligned_cols=244  Identities=12%  Similarity=0.048  Sum_probs=160.6

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccC-CCC-CCCceEEEEcccCChhHHHHHhc--
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-PGA-GDANLRVFEADVLDSGAVSRAVE--   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-~~~-~~~~~~~i~~D~~d~~~~~~~~~--   79 (307)
                      |+++++|+|+||||+|+||++++++|+++|+ +|++++|+.+..+.+... ... ...++.++.+|++|++++.++++  
T Consensus         3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   81 (319)
T 3ioy_A            3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEV   81 (319)
T ss_dssp             CCCCTTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            5566788999999999999999999999999 899999976554332211 000 11168899999999999888876  


Q ss_pred             -----CccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHHHhc----------CCcEEEEecCcceeccCCC
Q 021819           80 -----GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF----------GVRRVVVTSSISAIVPNPG  140 (307)
Q Consensus        80 -----~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~~v~iSS~~~~~~~~~  140 (307)
                           .+|+||||||......    ..+++.+.+++|+.|+.++++++...          +.++||++||..++.+.+.
T Consensus        82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~  161 (319)
T 3ioy_A           82 EARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGS  161 (319)
T ss_dssp             HHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSS
T ss_pred             HHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCC
Confidence                 5799999999764322    33456789999999999999987432          2468999999887655444


Q ss_pred             CCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCC
Q 021819          141 WKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS  217 (307)
Q Consensus       141 ~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~  217 (307)
                      .                    ..|+.||.+.+.+.+.++.+   .|+++++|+||.|.++........ ...+.......
T Consensus       162 ~--------------------~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~  220 (319)
T 3ioy_A          162 P--------------------GIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIR-PDALKGEVKPV  220 (319)
T ss_dssp             S--------------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC----------------------
T ss_pred             C--------------------HHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccC-chhhcccccch
Confidence            2                    57999999777666665544   489999999999998765432110 01110000000


Q ss_pred             -CCCC---CCcccCcccHHHHHHHHHHhhcCCCCCceEEecCCcc--cHHHHHHHHHHhCC
Q 021819          218 -KDTQ---EYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIY--QFGDFAERVSKLFP  272 (307)
Q Consensus       218 -~~~~---~~~~~~~i~~~dva~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~  272 (307)
                       ....   .......++++|+|++++.+++.+.   .+++++..+  .+.+.+..+.+.+|
T Consensus       221 ~~~~~~~~~~~~~~~~~pe~vA~~~~~al~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~  278 (319)
T 3ioy_A          221 DKTAVERLAGVHEFGMEPDVIGARVIEAMKANR---LHIFSHPDHKEELREVFDEIIAEYQ  278 (319)
T ss_dssp             --------CCGGGSSBCHHHHHHHHHHHHHTTC---SEECCCSTTHHHHHHHHHHHHHTCC
T ss_pred             hHHHHHHHHHhhhcCCCHHHHHHHHHHHHHcCC---CEEEcCHHHHHHHHHHHHHHHHhhh
Confidence             0000   1111123799999999999999764   245544332  34455555555565

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.95  E-value=9.1e-28  Score=202.94  Aligned_cols=227  Identities=16%  Similarity=0.119  Sum_probs=163.9

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc---
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE---   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~---   79 (307)
                      |+.+++|+++||||+|+||+++++.|+++|+ +|++.+|+.+..+.... +......++.++++|++|+++++++++   
T Consensus        15 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   93 (266)
T 4egf_A           15 VLRLDGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAA   93 (266)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            4456789999999999999999999999999 89999997655433221 110001178999999999999888776   


Q ss_pred             ----CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc----C-CcEEEEecCcceeccCCCCCCccc
Q 021819           80 ----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIVPNPGWKGKVF  146 (307)
Q Consensus        80 ----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~iSS~~~~~~~~~~~~~~~  146 (307)
                          ++|++|||||.....    ...+++.+.+++|+.++.++++++...    + .++||++||..+..+.+..     
T Consensus        94 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----  168 (266)
T 4egf_A           94 EAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDH-----  168 (266)
T ss_dssp             HHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTC-----
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCC-----
Confidence                789999999986532    233456789999999999999988432    3 4699999998775544332     


Q ss_pred             ccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCC
Q 021819          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (307)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (307)
                                     ..|+.+|...+.+.+.++.+   .|+++++|+||.|.++....... ............+     
T Consensus       169 ---------------~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p-----  227 (266)
T 4egf_A          169 ---------------YAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWG-DEAKSAPMIARIP-----  227 (266)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTC-SHHHHHHHHTTCT-----
T ss_pred             ---------------hHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhcc-ChHHHHHHHhcCC-----
Confidence                           57999999999999888776   48999999999998875321110 1122223333222     


Q ss_pred             cccCcccHHHHHHHHHHhhcCC--CCCceEEecCCcc
Q 021819          224 HWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIY  258 (307)
Q Consensus       224 ~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~  258 (307)
                       ...+.+++|+|+++++++...  ...|..+..++++
T Consensus       228 -~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~  263 (266)
T 4egf_A          228 -LGRFAVPHEVSDAVVWLASDAASMINGVDIPVDGGY  263 (266)
T ss_dssp             -TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             -CCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCCc
Confidence             345789999999999988653  3457655444443

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.95  E-value=2.6e-27  Score=202.47  Aligned_cols=240  Identities=17%  Similarity=0.136  Sum_probs=166.0

Q ss_pred             cccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCc------------ccc-cCCCCCCCceEEEEcccC
Q 021819            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS------------HLF-ALPGAGDANLRVFEADVL   69 (307)
Q Consensus         3 ~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~------------~~~-~~~~~~~~~~~~i~~D~~   69 (307)
                      +|+++++|+++||||+|+||+++++.|+++|+ +|++++|+.....            ... .+.. ...++.++++|++
T Consensus         4 ~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~   81 (287)
T 3pxx_A            4 SMGRVQDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEK-TGRKAYTAEVDVR   81 (287)
T ss_dssp             SCCTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHH-TTSCEEEEECCTT
T ss_pred             cccccCCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHh-cCCceEEEEccCC
Confidence            46677889999999999999999999999999 8999988632211            000 0011 1127889999999


Q ss_pred             ChhHHHHHhc-------CccEEEEeccCCCCC--CCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccC
Q 021819           70 DSGAVSRAVE-------GCKGVFHVASPCTLE--DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPN  138 (307)
Q Consensus        70 d~~~~~~~~~-------~~d~vi~~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~  138 (307)
                      |++++.++++       ++|+||||||.....  ...+.+.+.+++|+.++.++++++...  +.++||++||..+..+.
T Consensus        82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~  161 (287)
T 3pxx_A           82 DRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAA  161 (287)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccc
Confidence            9999888776       789999999986543  334567899999999999999999775  34689999997765543


Q ss_pred             CCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHc
Q 021819          139 PGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQ  215 (307)
Q Consensus       139 ~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~  215 (307)
                      ..   .+..|..+. +.     ...|+.+|...+.+.+.++.+.   |+++++++||.|.++.....     ........
T Consensus       162 ~~---~~~~~~~~~-~~-----~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-----~~~~~~~~  227 (287)
T 3pxx_A          162 AQ---PPGAGGPQG-PG-----GAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSA-----PMYRQFRP  227 (287)
T ss_dssp             HC---CC-----CH-HH-----HHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSH-----HHHHHHCT
T ss_pred             cc---cccccccCC-Cc-----cchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccc-----chhhhhcc
Confidence            22   122222211 11     1569999999999999888775   89999999999999875431     01111100


Q ss_pred             CC--C---------CCCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCcc
Q 021819          216 GS--K---------DTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIY  258 (307)
Q Consensus       216 ~~--~---------~~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~  258 (307)
                      ..  +         .........+.+++|+|+++++++...  ...|..+..+++.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~  283 (287)
T 3pxx_A          228 DLEAPSRADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGA  283 (287)
T ss_dssp             TSSSCCHHHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             ccccchhHHHHhhhhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchh
Confidence            00  0         000112267889999999999988543  3457655444443

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.95  E-value=1.8e-27  Score=199.88  Aligned_cols=223  Identities=17%  Similarity=0.132  Sum_probs=158.8

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCce-EEEEcccCChhHHHHHhc---
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANL-RVFEADVLDSGAVSRAVE---   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~i~~D~~d~~~~~~~~~---   79 (307)
                      |+++++|+++||||+|+||++++++|+++|+ +|++++|+.+..+.+....  .. ++ .++.+|++|+++++++++   
T Consensus         6 ~~~~~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~~-~~~~~~~~D~~~~~~~~~~~~~~~   81 (254)
T 2wsb_A            6 VFRLDGACAAVTGAGSGIGLEICRAFAASGA-RLILIDREAAALDRAAQEL--GA-AVAARIVADVTDAEAMTAAAAEAE   81 (254)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH--GG-GEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh--cc-cceeEEEEecCCHHHHHHHHHHHH
Confidence            3445678999999999999999999999999 8999999765433222110  01 45 889999999999888763   


Q ss_pred             ---CccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 ---GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                         ++|+||||||......    ..+.+.+.+++|+.++.++++++    ++.+.++||++||..+..+.+..       
T Consensus        82 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-------  154 (254)
T 2wsb_A           82 AVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQ-------  154 (254)
T ss_dssp             HHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSS-------
T ss_pred             hhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCC-------
Confidence               7899999999765321    22345788999999988777766    44567899999997664332221       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                           +      ...|+.+|.+.+.+.+.++.+.   +++++++|||.++|+...... .............+      .
T Consensus       155 -----~------~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~------~  216 (254)
T 2wsb_A          155 -----F------ASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMR-ERPELFETWLDMTP------M  216 (254)
T ss_dssp             -----C------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHH-TCHHHHHHHHHTST------T
T ss_pred             -----c------chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccc-cChHHHHHHHhcCC------C
Confidence                 1      1469999999999998887764   899999999999987532110 01122333333222      2


Q ss_pred             cCcccHHHHHHHHHHhhcCC--CCCceE-EecC
Q 021819          226 LGAVPVKDVAKAQVLLFESP--AASGRY-LCTN  255 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~--~~~g~~-~~~~  255 (307)
                      ..+++++|+|+++++++..+  ...|.. ++.+
T Consensus       217 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  249 (254)
T 2wsb_A          217 GRCGEPSEIAAAALFLASPAASYVTGAILAVDG  249 (254)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCCHHHHHHHHHHHhCcccccccCCEEEECC
Confidence            45789999999999998653  234654 4443

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.95  E-value=2.4e-27  Score=199.25  Aligned_cols=219  Identities=14%  Similarity=0.085  Sum_probs=156.0

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      |+.+++|+++||||+|+||+++++.|+++|+ +|++++|+.+. +.......    . .++++|++|+++++++++    
T Consensus         1 M~~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~-~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~   73 (256)
T 2d1y_A            1 MGLFAGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEG-KEVAEAIG----G-AFFQVDLEDERERVRFVEEAAY   73 (256)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTH-HHHHHHHT----C-EEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhH-HHHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHH
Confidence            3345678999999999999999999999999 89999997655 33221110    3 688999999998888775    


Q ss_pred             ---CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                         ++|+||||||.....    ...+++.+.+++|+.++.++++++..    .+.++||++||..+..+.+..       
T Consensus        74 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-------  146 (256)
T 2d1y_A           74 ALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQEN-------  146 (256)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTB-------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCC-------
Confidence               689999999976532    12235678999999999999988743    466899999997765543332       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCc--c-hHHHHHHHHcCCCCCCC
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN--A-SCAVLQQLLQGSKDTQE  222 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~--~-~~~~~~~~~~~~~~~~~  222 (307)
                                   ..|+.+|...+.+.+.++.+   .++++++++||.+.++.......  . ...........      
T Consensus       147 -------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~------  207 (256)
T 2d1y_A          147 -------------AAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDL------  207 (256)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTT------
T ss_pred             -------------hhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhc------
Confidence                         57999999999999888766   48999999999998763210000  0 00000111111      


Q ss_pred             CcccCcccHHHHHHHHHHhhcCC--CCCce-EEecC
Q 021819          223 YHWLGAVPVKDVAKAQVLLFESP--AASGR-YLCTN  255 (307)
Q Consensus       223 ~~~~~~i~~~dva~~~~~~~~~~--~~~g~-~~~~~  255 (307)
                      .....+++++|+|+++++++..+  ...|. +++.+
T Consensus       208 ~~~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~g  243 (256)
T 2d1y_A          208 HALRRLGKPEEVAEAVLFLASEKASFITGAILPVDG  243 (256)
T ss_dssp             STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCCCcCHHHHHHHHHHHhCchhcCCCCCEEEECC
Confidence            12356889999999999998754  23464 44443

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.95  E-value=3.4e-28  Score=197.91  Aligned_cols=193  Identities=20%  Similarity=0.174  Sum_probs=150.3

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc---CccEEEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GCKGVFH   86 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~---~~d~vi~   86 (307)
                      |+++||||+|+||++++++|+++   +|++++|++...+.+.....    . .++.+|++|++++.++++   ++|+|||
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~---~V~~~~r~~~~~~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~id~vi~   72 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH---DLLLSGRRAGALAELAREVG----A-RALPADLADELEAKALLEEAGPLDLLVH   72 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS---EEEEECSCHHHHHHHHHHHT----C-EECCCCTTSHHHHHHHHHHHCSEEEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC---CEEEEECCHHHHHHHHHhcc----C-cEEEeeCCCHHHHHHHHHhcCCCCEEEE
Confidence            48999999999999999999988   79999997644333322110    2 788899999999999988   8999999


Q ss_pred             eccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCc
Q 021819           87 VASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (307)
Q Consensus        87 ~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (307)
                      +||....    ....+++.+.+++|+.++.++++++++.+.++||++||..+..+.+..                    .
T Consensus        73 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~~~~--------------------~  132 (207)
T 2yut_A           73 AVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQVPGF--------------------A  132 (207)
T ss_dssp             CCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSSTTB--------------------H
T ss_pred             CCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCc--------------------c
Confidence            9997643    223456788999999999999999977777899999997765433221                    5


Q ss_pred             cHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHH
Q 021819          163 WYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQV  239 (307)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~  239 (307)
                      .|+.+|...+.+++.++.+   .|++++++|||.++|+....             .+      ....++++++|+|++++
T Consensus       133 ~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~-------------~~------~~~~~~~~~~dva~~~~  193 (207)
T 2yut_A          133 AYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWAP-------------LG------GPPKGALSPEEAARKVL  193 (207)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGGG-------------GT------SCCTTCBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCccc-------------cC------CCCCCCCCHHHHHHHHH
Confidence            7999999999999988776   59999999999999875211             01      12467899999999999


Q ss_pred             HhhcCCCCCc
Q 021819          240 LLFESPAASG  249 (307)
Q Consensus       240 ~~~~~~~~~g  249 (307)
                      ++++++....
T Consensus       194 ~~~~~~~~~~  203 (207)
T 2yut_A          194 EGLFREPVPA  203 (207)
T ss_dssp             HHHC--CCCS
T ss_pred             HHHhCCCCcc
Confidence            9998766543

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.95  E-value=1.6e-27  Score=200.24  Aligned_cols=220  Identities=18%  Similarity=0.187  Sum_probs=156.1

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------C
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~   80 (307)
                      ++|+++||||+|+||+++++.|+++|+ +|++++|+.+ ......+..... ++.++.+|++|++++.++++       +
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~-~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGA-NIVLNGFGDP-APALAEIARHGV-KAVHHPADLSDVAQIEALFALAEREFGG   79 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCC-HHHHHHHHTTSC-CEEEECCCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCch-HHHHHHHHhcCC-ceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999 8999998765 222222211112 68889999999999998887       7


Q ss_pred             ccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        81 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      +|+||||||.....    ...+++.+.+++|+.++.++.+++    ++.+.++||++||..+..+.+..           
T Consensus        80 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  148 (255)
T 2q2v_A           80 VDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGK-----------  148 (255)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTB-----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCc-----------
Confidence            89999999976431    223456789999999877777665    56677899999997765443331           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHH---H----HHHHcCCCCCCC
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAV---L----QQLLQGSKDTQE  222 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~---~----~~~~~~~~~~~~  222 (307)
                               ..|+.+|...+.+.+.++.+   .|+++++++||.|+++............   .    .......     
T Consensus       149 ---------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  214 (255)
T 2q2v_A          149 ---------AAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEK-----  214 (255)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTT-----
T ss_pred             ---------hhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhcc-----
Confidence                     56999999999999888776   4899999999999987532100000000   0    1110111     


Q ss_pred             CcccCcccHHHHHHHHHHhhcCCC--CCce-EEecC
Q 021819          223 YHWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (307)
Q Consensus       223 ~~~~~~i~~~dva~~~~~~~~~~~--~~g~-~~~~~  255 (307)
                      .....+++++|+|+++++++..+.  ..|. +++.+
T Consensus       215 ~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdg  250 (255)
T 2q2v_A          215 QPSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDG  250 (255)
T ss_dssp             CTTCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             CCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECC
Confidence            123468999999999999886533  3465 44443

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.95  E-value=1.5e-27  Score=199.43  Aligned_cols=220  Identities=19%  Similarity=0.179  Sum_probs=162.0

Q ss_pred             cccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         5 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      ..+++|+++||||+|+||+++++.|+++|+ +|++.+|+.+..+......  . .++.++++|++|+++++++++     
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~Dv~~~~~v~~~~~~~~~~   77 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASI--G-KKARAIAADISDPGSVKALFAEIQAL   77 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHH--C-TTEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh--C-CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            345688999999999999999999999999 8999998765543332211  1 168899999999999888876     


Q ss_pred             --CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcC-CcEEEEecCcceeccCCCCCCccccc
Q 021819           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFG-VRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                        ++|++|||||.....    ...+++.+.+++|+.++.++++++    ++.+ .++||++||..+..+.+..       
T Consensus        78 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  150 (247)
T 3rwb_A           78 TGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNM-------  150 (247)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTC-------
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCc-------
Confidence              689999999986542    233456889999999999999984    4445 5799999998776655443       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCc-chHHHHHHHHcCCCCCCCCc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN-ASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  224 (307)
                                   ..|+.+|...+.+.+.++.+   .|+++++++||.|.++....... ....+... ..        .
T Consensus       151 -------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~-~~--------~  208 (247)
T 3rwb_A          151 -------------AAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEM-LQ--------A  208 (247)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHH-HS--------S
T ss_pred             -------------hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhc-cc--------c
Confidence                         57999999999888888766   58999999999998864322211 11111111 01        1


Q ss_pred             ccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          225 WLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                      ...+.+++|+|+++++++...  ...|..+..+++
T Consensus       209 ~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG  243 (247)
T 3rwb_A          209 MKGKGQPEHIADVVSFLASDDARWITGQTLNVDAG  243 (247)
T ss_dssp             SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            345679999999999988654  345765544444

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.95  E-value=8.3e-28  Score=203.49  Aligned_cols=221  Identities=19%  Similarity=0.120  Sum_probs=162.1

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++++|+....+.+.........++..+.+|++|+++++++++      
T Consensus        25 ~l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (270)
T 3ftp_A           25 TLDKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF  103 (270)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            35678999999999999999999999999 99999997654433221110001167889999999999888876      


Q ss_pred             -CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                       ++|++|||||.....    ...+++++.+++|+.++.++++++.    +.+.++||++||..+..+.+..         
T Consensus       104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  174 (270)
T 3ftp_A          104 GALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQ---------  174 (270)
T ss_dssp             SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTB---------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCc---------
Confidence             689999999976542    2334568899999999999999884    3455799999998776654442         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                                 ..|+.+|...+.+.+.++.+   .|+++++++||.|.++.....   ............      ....
T Consensus       175 -----------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~------p~~r  234 (270)
T 3ftp_A          175 -----------VNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGL---PQEQQTALKTQI------PLGR  234 (270)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHS---CHHHHHHHHTTC------TTCS
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhc---CHHHHHHHHhcC------CCCC
Confidence                       57999999999998888776   489999999999988753221   112222222222      2356


Q ss_pred             cccHHHHHHHHHHhhcC--CCCCceEEecCC
Q 021819          228 AVPVKDVAKAQVLLFES--PAASGRYLCTNG  256 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~--~~~~g~~~~~~~  256 (307)
                      +.+++|+|+++++++..  ....|..+..++
T Consensus       235 ~~~pedvA~~v~~L~s~~~~~itG~~i~vdG  265 (270)
T 3ftp_A          235 LGSPEDIAHAVAFLASPQAGYITGTTLHVNG  265 (270)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCHHHHHHHHHHHhCCCcCCccCcEEEECC
Confidence            78999999999998853  334576443333

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.95  E-value=6e-27  Score=198.03  Aligned_cols=224  Identities=15%  Similarity=0.116  Sum_probs=159.2

Q ss_pred             ccccCCcEEEEeCCch-hhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCCCCCceEEEEcccCChhHHHHHhc--
Q 021819            4 EAEKEEETVCVTGANG-FIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG-~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~--   79 (307)
                      |+.+++|+++||||+| +||++++++|+++|+ +|++++|+.+..+... .+......++.++++|++|+++++++++  
T Consensus        17 ~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   95 (266)
T 3o38_A           17 HGLLKGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQT   95 (266)
T ss_dssp             CSTTTTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHH
Confidence            4456789999999997 799999999999999 8999999765543322 1211122278999999999999888876  


Q ss_pred             -----CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc-----CCcEEEEecCcceeccCCCCCCcc
Q 021819           80 -----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF-----GVRRVVVTSSISAIVPNPGWKGKV  145 (307)
Q Consensus        80 -----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~iSS~~~~~~~~~~~~~~  145 (307)
                           .+|+||||||.....    ...+++...+++|+.++.++++++...     +.++||++||..+..+.+..    
T Consensus        96 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~----  171 (266)
T 3o38_A           96 VEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQ----  171 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTC----
T ss_pred             HHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCC----
Confidence                 679999999976542    233456889999999999999988553     45789999997765544332    


Q ss_pred             cccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCC
Q 021819          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (307)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (307)
                                      ..|+.+|.+.+.+.+.++.+   .|+++++++||.|.++.......  ...........     
T Consensus       172 ----------------~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~-----  228 (266)
T 3o38_A          172 ----------------SHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSS--SELLDRLASDE-----  228 (266)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-------------------CC-----
T ss_pred             ----------------chHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCc--HHHHHHHHhcC-----
Confidence                            57999999999999888776   58999999999999876433210  11111111111     


Q ss_pred             CcccCcccHHHHHHHHHHhhcCC--CCCceEEecCC
Q 021819          223 YHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNG  256 (307)
Q Consensus       223 ~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~  256 (307)
                       ....+.+++|+|+++++++...  ...|.++..++
T Consensus       229 -~~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdg  263 (266)
T 3o38_A          229 -AFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSS  263 (266)
T ss_dssp             -TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             -CcCCCCCHHHHHHHHHHHcCccccCccCCEEEEcC
Confidence             2456789999999999988753  34576544433

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.95  E-value=3.5e-27  Score=200.56  Aligned_cols=220  Identities=18%  Similarity=0.165  Sum_probs=157.0

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeC-CCCCCccccc-CCCCCCCceEEEEcccCCh----hHHHHHhc-
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDSSHLFA-LPGAGDANLRVFEADVLDS----GAVSRAVE-   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r-~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~----~~~~~~~~-   79 (307)
                      +++|+++||||+|+||+++++.|+++|+ +|++++| +.+..+.+.. +......++.++.+|++|.    +++.++++ 
T Consensus         9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A            9 SECPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             --CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence            3468999999999999999999999999 8999998 5443332211 1000011688999999999    88888776 


Q ss_pred             ------CccEEEEeccCCCCC----CCC-----------ChhhhhhhhhHHHHHHHHHHHHhc---CC------cEEEEe
Q 021819           80 ------GCKGVFHVASPCTLE----DPV-----------DPEKELILPAVQGTLNVLEAAKRF---GV------RRVVVT  129 (307)
Q Consensus        80 ------~~d~vi~~a~~~~~~----~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~---~~------~~~v~i  129 (307)
                            ++|+||||||.....    ...           +.+...+++|+.++.++++++.+.   +.      ++||++
T Consensus        88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~i  167 (276)
T 1mxh_A           88 SFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNL  167 (276)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEE
T ss_pred             HHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEE
Confidence                  689999999976432    122           456789999999999999999774   34      799999


Q ss_pred             cCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcch
Q 021819          130 SSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNAS  206 (307)
Q Consensus       130 SS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~  206 (307)
                      ||..+..+.+..                    ..|+.+|...+.+.+.++.+.   |+++++++||.|+++ . ..   .
T Consensus       168 sS~~~~~~~~~~--------------------~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~-~~---~  222 (276)
T 1mxh_A          168 CDAMTDLPLPGF--------------------CVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P-AM---P  222 (276)
T ss_dssp             CCGGGGSCCTTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S-SS---C
T ss_pred             CchhhcCCCCCC--------------------eehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c-cC---C
Confidence            998765543332                    579999999999998887664   899999999999998 2 11   1


Q ss_pred             HHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          207 CAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                      ...........+.     .+++.+++|+|+++++++...  ...|.++..+++
T Consensus       223 ~~~~~~~~~~~p~-----~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG  270 (276)
T 1mxh_A          223 QETQEEYRRKVPL-----GQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGG  270 (276)
T ss_dssp             HHHHHHHHTTCTT-----TSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHhcCCC-----CCCCCCHHHHHHHHHHHhCccccCccCcEEEECCc
Confidence            2333333332221     122789999999999998643  234654433333

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.95  E-value=2.4e-27  Score=199.39  Aligned_cols=219  Identities=21%  Similarity=0.214  Sum_probs=159.8

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ++++|+++||||+|+||+++++.|+++|+ +|++++|+....  ...+.    .++.++++|++|+++++++++      
T Consensus         6 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~--~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~g   78 (257)
T 3tl3_A            6 EIRDAVAVVTGGASGLGLATTKRLLDAGA-QVVVLDIRGEDV--VADLG----DRARFAAADVTDEAAVASALDLAETMG   78 (257)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCHHH--HHHTC----TTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             eecCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCchHHH--HHhcC----CceEEEECCCCCHHHHHHHHHHHHHhC
Confidence            45678999999999999999999999999 899998854322  22221    178999999999999988876      


Q ss_pred             CccEEEEeccCCCC--------CCCCChhhhhhhhhHHHHHHHHHHHHh------------cCCcEEEEecCcceeccCC
Q 021819           80 GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKR------------FGVRRVVVTSSISAIVPNP  139 (307)
Q Consensus        80 ~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~------------~~~~~~v~iSS~~~~~~~~  139 (307)
                      ++|++|||||....        ....+++++.+++|+.++.++++++..            .+.++||++||..+..+.+
T Consensus        79 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  158 (257)
T 3tl3_A           79 TLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQI  158 (257)
T ss_dssp             CEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHH
T ss_pred             CCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCC
Confidence            78999999997532        133456789999999999999998854            2346899999977644322


Q ss_pred             CCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcC
Q 021819          140 GWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQG  216 (307)
Q Consensus       140 ~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~  216 (307)
                      .               .     ..|+.+|...+.+.+.++.+   .|+++++++||.|.++.....   ...........
T Consensus       159 ~---------------~-----~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~  215 (257)
T 3tl3_A          159 G---------------Q-----AAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASL---PEEARASLGKQ  215 (257)
T ss_dssp             H---------------H-----HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC------CHHHHHHHHHT
T ss_pred             C---------------C-----ccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhc---cHHHHHHHHhc
Confidence            1               1     57999999999998887766   489999999999998875432   12222333332


Q ss_pred             CCCCCCCcccCcccHHHHHHHHHHhhcCCCCCceEEecCCccc
Q 021819          217 SKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQ  259 (307)
Q Consensus       217 ~~~~~~~~~~~~i~~~dva~~~~~~~~~~~~~g~~~~~~~~~~  259 (307)
                      .+.     ...+.+++|+|+++++++.++...|..+..+++++
T Consensus       216 ~~~-----~~r~~~p~dva~~v~~l~s~~~itG~~i~vdGG~~  253 (257)
T 3tl3_A          216 VPH-----PSRLGNPDEYGALAVHIIENPMLNGEVIRLDGAIR  253 (257)
T ss_dssp             SSS-----SCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTC-
T ss_pred             CCC-----CCCccCHHHHHHHHHHHhcCCCCCCCEEEECCCcc
Confidence            221     14578999999999999988777787665555544

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.95  E-value=5e-27  Score=200.47  Aligned_cols=220  Identities=14%  Similarity=0.073  Sum_probs=158.4

Q ss_pred             cCCcEEEEeCCc--hhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            7 KEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         7 ~~~~~ilItGat--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      +++|+++||||+  |+||+++++.|+++|+ +|++++|+....+.+..+..... ++.++++|++|+++++++++     
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGA-QLAFTYATPKLEKRVREIAKGFG-SDLVVKCDVSLDEDIKNLKKFLEEN   96 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            567899999999  9999999999999999 89999997642112222111011 46788999999999888776     


Q ss_pred             --CccEEEEeccCCCC--------CCCCChhhhhhhhhHHHHHHHHHHHHhcC---CcEEEEecCcceeccCCCCCCccc
Q 021819           80 --GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRFG---VRRVVVTSSISAIVPNPGWKGKVF  146 (307)
Q Consensus        80 --~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~v~iSS~~~~~~~~~~~~~~~  146 (307)
                        ++|+||||||....        ....+++...+++|+.++.++++++...-   .++||++||..+..+.+..     
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----  171 (285)
T 2p91_A           97 WGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHY-----  171 (285)
T ss_dssp             TSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTTT-----
T ss_pred             cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCCc-----
Confidence              68999999997642        22334567899999999999999997652   3799999997765443332     


Q ss_pred             ccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCC
Q 021819          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (307)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (307)
                                     ..|+.+|...+.+.+.++.+   .|+++++++||.|+++...... .............+     
T Consensus       172 ---------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~p-----  230 (285)
T 2p91_A          172 ---------------NVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSIT-GFHLLMEHTTKVNP-----  230 (285)
T ss_dssp             ---------------THHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CT-THHHHHHHHHHHST-----
T ss_pred             ---------------cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhccc-chHHHHHHHHhcCC-----
Confidence                           57999999999999888766   3899999999999998754321 11222333222222     


Q ss_pred             cccCcccHHHHHHHHHHhhcCC--CCCceE-EecC
Q 021819          224 HWLGAVPVKDVAKAQVLLFESP--AASGRY-LCTN  255 (307)
Q Consensus       224 ~~~~~i~~~dva~~~~~~~~~~--~~~g~~-~~~~  255 (307)
                       ...+.+++|+|+++++++...  ...|.. ++.+
T Consensus       231 -~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdg  264 (285)
T 2p91_A          231 -FGKPITIEDVGDTAVFLCSDWARAITGEVVHVDN  264 (285)
T ss_dssp             -TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             -CCCCcCHHHHHHHHHHHcCCcccCCCCCEEEECC
Confidence             234679999999999988643  234654 4443

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.95  E-value=2.2e-27  Score=201.05  Aligned_cols=213  Identities=19%  Similarity=0.135  Sum_probs=148.0

Q ss_pred             ccccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--
Q 021819            2 ASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (307)
Q Consensus         2 ~~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--   79 (307)
                      .+|..+++|+++||||+|+||+++++.|+++|+ +|++.+|+.+..+.+.....   .++.++++|++|+++++++++  
T Consensus        21 ~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~   96 (272)
T 4dyv_A           21 QSMSKTGKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGRRLDALQETAAEIG---DDALCVPTDVTDPDSVRALFTAT   96 (272)
T ss_dssp             -------CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHT---SCCEEEECCTTSHHHHHHHHHHH
T ss_pred             hhhcCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhC---CCeEEEEecCCCHHHHHHHHHHH
Confidence            346566788999999999999999999999999 89999997655433322111   168899999999999988876  


Q ss_pred             -----CccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHHHh----cC--CcEEEEecCcceeccCCCCCC
Q 021819           80 -----GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKR----FG--VRRVVVTSSISAIVPNPGWKG  143 (307)
Q Consensus        80 -----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~~~~v~iSS~~~~~~~~~~~~  143 (307)
                           ++|+||||||....     ....+++.+.+++|+.++.++++++..    .+  .++||++||..+..+.+..  
T Consensus        97 ~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~--  174 (272)
T 4dyv_A           97 VEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYS--  174 (272)
T ss_dssp             HHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTC--
T ss_pred             HHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCc--
Confidence                 78999999998543     123345688999999999888887743    33  4699999998776554332  


Q ss_pred             cccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCC
Q 021819          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT  220 (307)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  220 (307)
                                        ..|+.+|...+.+.+.++.+   .++++++++||.|.++.........    .....     
T Consensus       175 ------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~----~~~~~-----  227 (272)
T 4dyv_A          175 ------------------APYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGV----PQADL-----  227 (272)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-------------------------
T ss_pred             ------------------hHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccc----hhhhh-----
Confidence                              57999999999999888766   4899999999999987643221100    00000     


Q ss_pred             CCCcccCcccHHHHHHHHHHhhcCCCCC
Q 021819          221 QEYHWLGAVPVKDVAKAQVLLFESPAAS  248 (307)
Q Consensus       221 ~~~~~~~~i~~~dva~~~~~~~~~~~~~  248 (307)
                       ......+++++|+|+++++++..+...
T Consensus       228 -~~~~~~~~~pedvA~~v~fL~s~~~~~  254 (272)
T 4dyv_A          228 -SIKVEPVMDVAHVASAVVYMASLPLDA  254 (272)
T ss_dssp             ---------CHHHHHHHHHHHHHSCTTS
T ss_pred             -cccccCCCCHHHHHHHHHHHhCCCCcC
Confidence             012344789999999999999977654

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.95  E-value=2.4e-27  Score=201.36  Aligned_cols=222  Identities=18%  Similarity=0.154  Sum_probs=160.7

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ++++|+++||||+|+||+++++.|+++|+ +|++.+|+.+..+.+....  . .++..+++|++|+++++++++      
T Consensus        24 ~l~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (277)
T 4dqx_A           24 DLNQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEI--G-SKAFGVRVDVSSAKDAESMVEKTTAKW   99 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHH--C-TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh--C-CceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            35678999999999999999999999999 8999999765443332211  1 168899999999999888876      


Q ss_pred             -CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                       ++|++|||||.....    ...+.+.+.+++|+.++.++++++.    +.+.++||++||..+..+.+..         
T Consensus       100 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  170 (277)
T 4dqx_A          100 GRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADR---------  170 (277)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTB---------
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCC---------
Confidence             689999999976542    2234567889999999999988874    4456799999997765443332         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCC---CcchHHHHHHHHcCCCCCCCCc
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  224 (307)
                                 ..|+.+|.+.+.+.+.++.+.   |+++++++||.|.++.....   ...............      .
T Consensus       171 -----------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~------~  233 (277)
T 4dqx_A          171 -----------TAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARA------V  233 (277)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTS------T
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcC------c
Confidence                       579999999999998887664   89999999999988641100   011111111122222      2


Q ss_pred             ccCcccHHHHHHHHHHhhcCCC--CCceEEecCCc
Q 021819          225 WLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGI  257 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~~--~~g~~~~~~~~  257 (307)
                      ...+.+++|+|+++++++....  ..|..+..+++
T Consensus       234 ~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  268 (277)
T 4dqx_A          234 MDRMGTAEEIAEAMLFLASDRSRFATGSILTVDGG  268 (277)
T ss_dssp             TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             ccCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCc
Confidence            3457899999999999986543  45665444433

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.95  E-value=1.1e-26  Score=196.54  Aligned_cols=215  Identities=18%  Similarity=0.153  Sum_probs=159.2

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      .+++|+|+||||+|+||+++++.|+++|+ +|++++|+......          .+..+++|++|++++.++++      
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~----------~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGA-KVVSVSLDEKSDVN----------VSDHFKIDVTNEEEVKEAVEKTTKKY   79 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCC--CTT----------SSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhccC----------ceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            45689999999999999999999999999 89999987654311          46788999999999888876      


Q ss_pred             -CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                       ++|++|||||.....    ...+.+.+.+++|+.++.++++++..    .+.++||++||..+..+.+..         
T Consensus        80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  150 (269)
T 3vtz_A           80 GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNA---------  150 (269)
T ss_dssp             SCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTC---------
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCC---------
Confidence             689999999976542    22344678899999999999998743    466799999998775554432         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHhc--CCcEEEEecCceeCCCCCCC--------CcchHHHHHHHHcCCCCC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPY--------LNASCAVLQQLLQGSKDT  220 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~i~~~ivrp~~v~g~~~~~~--------~~~~~~~~~~~~~~~~~~  220 (307)
                                 ..|+.+|...+.+.+.++.+.  ++++++++||.|.++.....        ...............   
T Consensus       151 -----------~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  216 (269)
T 3vtz_A          151 -----------AAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQH---  216 (269)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHS---
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcC---
Confidence                       579999999999999888776  89999999999988742110        001112222222222   


Q ss_pred             CCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          221 QEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       221 ~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                         ....+.+++|+|+++++++...  ...|..+..+++
T Consensus       217 ---p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  252 (269)
T 3vtz_A          217 ---PMGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGG  252 (269)
T ss_dssp             ---TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ---CCCCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCC
Confidence               2356789999999999988653  345665444444

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.95  E-value=1.2e-26  Score=194.07  Aligned_cols=206  Identities=20%  Similarity=0.139  Sum_probs=151.2

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCC--CCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g--~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +|+|+||||+|+||+++++.|+++|  + +|++++|+....+.+..+  . ..++.++.+|++|++++.++++       
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~-~V~~~~r~~~~~~~l~~~--~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEKATELKSI--K-DSRVHVLPLTVTCDKSLDTFVSKVGEIVG   78 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGGCHHHHTC--C-CTTEEEEECCTTCHHHHHHHHHHHHHHHG
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCc-EEEEEecCHHHHHHHHhc--c-CCceEEEEeecCCHHHHHHHHHHHHHhcC
Confidence            5799999999999999999999999  8 999999987665555443  1 2278999999999999888876       


Q ss_pred             --CccEEEEeccCCC-C----CCCCChhhhhhhhhHHHHHHHHHHHHhc----------C-----CcEEEEecCcceecc
Q 021819           80 --GCKGVFHVASPCT-L----EDPVDPEKELILPAVQGTLNVLEAAKRF----------G-----VRRVVVTSSISAIVP  137 (307)
Q Consensus        80 --~~d~vi~~a~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~-----~~~~v~iSS~~~~~~  137 (307)
                        ++|+||||||... .    ....+.+...+++|+.++.++++++...          +     .++||++||..+..+
T Consensus        79 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~  158 (250)
T 1yo6_A           79 SDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSIT  158 (250)
T ss_dssp             GGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCST
T ss_pred             CCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccC
Confidence              7999999999765 2    2223456789999999999999887543          4     679999999776543


Q ss_pred             CCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHH
Q 021819          138 NPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLL  214 (307)
Q Consensus       138 ~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~  214 (307)
                      ...       ++.+..+      ...|+.+|...+.+.+.++.+.   ++++++++||.|.++....             
T Consensus       159 ~~~-------~~~~~~~------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------------  212 (250)
T 1yo6_A          159 DNT-------SGSAQFP------VLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-------------  212 (250)
T ss_dssp             TCC-------STTSSSC------BHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------
T ss_pred             Ccc-------cccccCC------ccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-------------
Confidence            211       0111011      2569999999999999888775   8999999999998875321             


Q ss_pred             cCCCCCCCCcccCcccHHHHHHHHHHhhcCCC--CCceEEecC
Q 021819          215 QGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTN  255 (307)
Q Consensus       215 ~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~--~~g~~~~~~  255 (307)
                                 ..+++++|+|+.++.++..+.  ..|.|+..+
T Consensus       213 -----------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~  244 (250)
T 1yo6_A          213 -----------NAALTVEQSTAELISSFNKLDNSHNGRFFMRN  244 (250)
T ss_dssp             -----------------HHHHHHHHHHHTTCCGGGTTCEEETT
T ss_pred             -----------CCCCCHHHHHHHHHHHHhcccccCCCeEEEEC
Confidence                       135799999999999998765  357776544

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.95  E-value=2.6e-27  Score=199.63  Aligned_cols=220  Identities=13%  Similarity=0.092  Sum_probs=159.5

Q ss_pred             cCCcEEEEeCCc--hhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            7 KEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         7 ~~~~~ilItGat--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      +++|+++||||+  |+||+++++.|+++|+ +|++++|+.+..+.+..+..... ++.++++|++|+++++++++     
T Consensus         6 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~   83 (261)
T 2wyu_A            6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALG-GALLFRADVTQDEELDALFAGVKEA   83 (261)
T ss_dssp             CTTCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHHHHTT-CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC-CcEEEECCCCCHHHHHHHHHHHHHH
Confidence            457899999999  9999999999999999 89999997642112222111011 46789999999999888876     


Q ss_pred             --CccEEEEeccCCCC--------CCCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcccc
Q 021819           80 --GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        80 --~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                        ++|+||||||....        ....+++.+.+++|+.++.++++++.+.  ..++||++||..+..+.+..      
T Consensus        84 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~------  157 (261)
T 2wyu_A           84 FGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKY------  157 (261)
T ss_dssp             HSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTC------
T ss_pred             cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCCCc------
Confidence              68999999997542        2234456889999999999999999765  12589999997765443332      


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCc
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (307)
                                    ..|+.+|...+.+.+.++.+.   |+++++++||.|+++...... .............+      
T Consensus       158 --------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~p------  216 (261)
T 2wyu_A          158 --------------NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIP-GFTKMYDRVAQTAP------  216 (261)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCT-THHHHHHHHHHHST------
T ss_pred             --------------hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhcc-ccHHHHHHHHhcCC------
Confidence                          569999999999998887764   899999999999998643321 12223333322222      


Q ss_pred             ccCcccHHHHHHHHHHhhcCC--CCCce-EEecC
Q 021819          225 WLGAVPVKDVAKAQVLLFESP--AASGR-YLCTN  255 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~--~~~g~-~~~~~  255 (307)
                      ...+.+++|+|+++++++...  ...|. +++.+
T Consensus       217 ~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdg  250 (261)
T 2wyu_A          217 LRRNITQEEVGNLGLFLLSPLASGITGEVVYVDA  250 (261)
T ss_dssp             TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECC
Confidence            234679999999999998643  23465 44443

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.95  E-value=6.6e-27  Score=195.83  Aligned_cols=217  Identities=17%  Similarity=0.078  Sum_probs=155.3

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc---Ccc
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GCK   82 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~---~~d   82 (307)
                      ..++|+|+||||+|+||+++++.|+++|+ +|++.+|+.+..+.+.....   .++.++.+|++|.+++.++++   ++|
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~id   86 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALK---DNYTIEVCNLANKEECSNLISKTSNLD   86 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHC---SSEEEEECCTTSHHHHHHHHHTCSCCS
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhc---cCccEEEcCCCCHHHHHHHHHhcCCCC
Confidence            45688999999999999999999999999 89999997655443322111   168899999999999998887   689


Q ss_pred             EEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccCCCCch
Q 021819           83 GVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (307)
Q Consensus        83 ~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~  154 (307)
                      +||||||....    ....+++...+++|+.++.++++++.    +.+.++||++||..+..+.+..             
T Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------------  153 (249)
T 3f9i_A           87 ILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQ-------------  153 (249)
T ss_dssp             EEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCS-------------
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCC-------------
Confidence            99999997653    23345678999999999999988874    3456799999998776554432             


Q ss_pred             hhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccH
Q 021819          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPV  231 (307)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  231 (307)
                             ..|+.+|.+.+.+.+.++.+   .++++++++||.|.++......   .........+.      ....+.++
T Consensus       154 -------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~------~~~~~~~~  217 (249)
T 3f9i_A          154 -------ANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLN---EKQREAIVQKI------PLGTYGIP  217 (249)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CC---HHHHHHHHHHC------TTCSCBCH
T ss_pred             -------chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccC---HHHHHHHHhcC------CCCCCcCH
Confidence                   57999999999998888766   4899999999999988654431   22222222222      24568899


Q ss_pred             HHHHHHHHHhhcCCC--CCceE-EecC
Q 021819          232 KDVAKAQVLLFESPA--ASGRY-LCTN  255 (307)
Q Consensus       232 ~dva~~~~~~~~~~~--~~g~~-~~~~  255 (307)
                      +|+|+++++++..+.  ..|.. ++.+
T Consensus       218 ~dva~~~~~l~s~~~~~~tG~~~~vdg  244 (249)
T 3f9i_A          218 EDVAYAVAFLASNNASYITGQTLHVNG  244 (249)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHcCCccCCccCcEEEECC
Confidence            999999999987543  34654 4443

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.95  E-value=2.4e-27  Score=202.93  Aligned_cols=222  Identities=15%  Similarity=0.115  Sum_probs=162.4

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC-cccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      +++|+++||||+|+||+++++.|+++|+ +|++.+|+.... +...........++.++++|++|+++++++++      
T Consensus        45 l~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  123 (291)
T 3ijr_A           45 LKGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL  123 (291)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999 899998875432 22211111111278899999999999888876      


Q ss_pred             -CccEEEEeccCCCCC-----CCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 -GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                       ++|++|||||.....     ...+++.+.+++|+.++.++++++...  ..++||++||..+..+.+..          
T Consensus       124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  193 (291)
T 3ijr_A          124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETL----------  193 (291)
T ss_dssp             SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTTC----------
T ss_pred             CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCCC----------
Confidence             689999999976432     134456899999999999999999765  24689999998876654442          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (307)
                                ..|+.+|...+.+.+.++.+.   |+++++|+||.|+++......  ............      ....+
T Consensus       194 ----------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~------p~~r~  255 (291)
T 3ijr_A          194 ----------IDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSF--DEKKVSQFGSNV------PMQRP  255 (291)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHS--CHHHHHHTTTTS------TTSSC
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccC--CHHHHHHHHccC------CCCCC
Confidence                      569999999999998887764   899999999999987532110  111112211111      24567


Q ss_pred             ccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          229 VPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       229 i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                      .+++|+|+++++++...  ...|..+..+++
T Consensus       256 ~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  286 (291)
T 3ijr_A          256 GQPYELAPAYVYLASSDSSYVTGQMIHVNGG  286 (291)
T ss_dssp             BCGGGTHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             cCHHHHHHHHHHHhCCccCCCcCCEEEECCC
Confidence            89999999999988653  345765544444

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.95  E-value=1.6e-26  Score=195.11  Aligned_cols=215  Identities=18%  Similarity=0.130  Sum_probs=157.2

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      |+.+++|+++||||+|+||+++++.|+++|+ +|++++|+....           .++.++++|++|+++++++++    
T Consensus         3 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~-----------~~~~~~~~Dl~~~~~v~~~~~~~~~   70 (264)
T 2dtx_A            3 FSDLRDKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIHDPGE-----------AKYDHIECDVTNPDQVKASIDHIFK   70 (264)
T ss_dssp             CGGGTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSCCCS-----------CSSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEecCcccC-----------CceEEEEecCCCHHHHHHHHHHHHH
Confidence            3445678999999999999999999999999 899999975440           167889999999999888876    


Q ss_pred             ---CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                         ++|+||||||.....    ...+++.+.+++|+.++.++++++..    .+.++||++||..+..+.+..       
T Consensus        71 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  143 (264)
T 2dtx_A           71 EYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNA-------  143 (264)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTB-------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCc-------
Confidence               689999999976432    13345688999999999999888854    456799999997764433221       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHhcC--CcEEEEecCceeCCCCCCCCc----chH----HHHHHHHcCCC
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG--VDVVAIHPATCLGPLMQPYLN----ASC----AVLQQLLQGSK  218 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~--i~~~ivrp~~v~g~~~~~~~~----~~~----~~~~~~~~~~~  218 (307)
                                   ..|+.+|...+.+.+.++.+.+  +++++++||.+.++.......    ...    .......... 
T Consensus       144 -------------~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  209 (264)
T 2dtx_A          144 -------------SAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEH-  209 (264)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHS-
T ss_pred             -------------hhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcC-
Confidence                         5799999999999998887654  999999999998764211000    000    1111111111 


Q ss_pred             CCCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCC
Q 021819          219 DTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNG  256 (307)
Q Consensus       219 ~~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~  256 (307)
                           ....+++++|+|+++++++..+  ...|..+..++
T Consensus       210 -----p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG  244 (264)
T 2dtx_A          210 -----PMQRIGKPQEVASAVAFLASREASFITGTCLYVDG  244 (264)
T ss_dssp             -----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -----CCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECC
Confidence                 1345889999999999998753  24465443333

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.95  E-value=2.6e-27  Score=200.33  Aligned_cols=225  Identities=17%  Similarity=0.127  Sum_probs=157.7

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCC-CCCceEEEEcccCChhHHHHHhc----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGA-GDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+.. +... ...++.++.+|++|+++++++++    
T Consensus        10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   88 (267)
T 1iy8_A           10 RFTDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   88 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            45678999999999999999999999999 89999997654332211 1000 01168899999999999888876    


Q ss_pred             ---CccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccc
Q 021819           80 ---GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                         ++|+||||||....     ....+++++.+++|+.++.++.+++    ++.+.++||++||..+..+.+..      
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------  162 (267)
T 1iy8_A           89 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQ------  162 (267)
T ss_dssp             HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSB------
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCC------
Confidence               68999999997543     1223456889999999988776665    45567899999997765443331      


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCC-----CcchHHHHHHHHcCCCC
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY-----LNASCAVLQQLLQGSKD  219 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~  219 (307)
                                    ..|+.+|...+.+.+.++.+   .|+++++++||.|+++.....     ...............  
T Consensus       163 --------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--  226 (267)
T 1iy8_A          163 --------------SGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVN--  226 (267)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTC--
T ss_pred             --------------ccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccC--
Confidence                          57999999999998887765   489999999999988742110     000111111222211  


Q ss_pred             CCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          220 TQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       220 ~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                          ....+.+++|+|+++++++..+  ...|..+..+++
T Consensus       227 ----p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG  262 (267)
T 1iy8_A          227 ----PSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGG  262 (267)
T ss_dssp             ----TTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ----CCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence                1245789999999999988654  345665444333

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.95  E-value=4.6e-27  Score=199.56  Aligned_cols=224  Identities=15%  Similarity=0.115  Sum_probs=163.5

Q ss_pred             cccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         5 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      +++++|+++||||+|+||+++++.|+++|+ +|++.+|+.+..+.+.........++.++++|++|+++++++++     
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  106 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGE  106 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            356789999999999999999999999999 89999997665544322111111268899999999999988886     


Q ss_pred             --CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cC-CcEEEEecCcceeccCCCCCCccccc
Q 021819           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                        ++|++|||||.....    ...+++++.+++|+.++.++++++..    .+ .++||++||..+.......       
T Consensus       107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~-------  179 (276)
T 3r1i_A          107 LGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQ-------  179 (276)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSS-------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCC-------
Confidence              789999999986542    23345678889999999999998744    33 3789999997764432110       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                                 ....|+.+|...+.+.+.++.+   .++++++++||.|.++......    ..........      ..
T Consensus       180 -----------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~----~~~~~~~~~~------p~  238 (276)
T 3r1i_A          180 -----------QVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLA----DYHALWEPKI------PL  238 (276)
T ss_dssp             -----------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGG----GGHHHHGGGS------TT
T ss_pred             -----------CcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccch----HHHHHHHhcC------CC
Confidence                       1146999999999999888877   5899999999999998754321    1222222222      13


Q ss_pred             cCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          226 LGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                      ..+.+++|+|+++++++...  ...|..+..+++
T Consensus       239 ~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG  272 (276)
T 3r1i_A          239 GRMGRPEELTGLYLYLASAASSYMTGSDIVIDGG  272 (276)
T ss_dssp             SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCcCHHHHHHHHHHHcCccccCccCcEEEECcC
Confidence            45789999999999988743  345765544444

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.95  E-value=4.2e-27  Score=196.65  Aligned_cols=218  Identities=17%  Similarity=0.168  Sum_probs=156.2

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeC-CCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r-~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ++|+++||||+|+||+++++.|+++|+ +|++++| +.+..+.+.. +..... ++.++++|++|+++++++++      
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGA-NVVVNYAGNEQKANEVVDEIKKLGS-DAIAVRADVANAEDVTNMVKQTVDVF   80 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999999 8999888 4433222211 111111 68899999999999888876      


Q ss_pred             -CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                       ++|++|||||.....    ...+++.+.+++|+.++.++++++.    +.+.++||++||..+..+.+..         
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  151 (246)
T 2uvd_A           81 GQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQ---------  151 (246)
T ss_dssp             SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTB---------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCC---------
Confidence             689999999976431    2334567899999999877777663    4567899999998776554332         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                                 ..|+.+|...+.+.+.++.+   .|+++++++||.|.++.......   ..........+      ...
T Consensus       152 -----------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~~p------~~~  211 (246)
T 2uvd_A          152 -----------ANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDE---NIKAEMLKLIP------AAQ  211 (246)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCT---THHHHHHHTCT------TCS
T ss_pred             -----------chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCH---HHHHHHHhcCC------CCC
Confidence                       56999999988888777655   48999999999999886443211   11122222221      235


Q ss_pred             cccHHHHHHHHHHhhcCC--CCCceEEecCC
Q 021819          228 AVPVKDVAKAQVLLFESP--AASGRYLCTNG  256 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~--~~~g~~~~~~~  256 (307)
                      +++++|+|+++++++..+  ...|..+..++
T Consensus       212 ~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdg  242 (246)
T 2uvd_A          212 FGEAQDIANAVTFFASDQSKYITGQTLNVDG  242 (246)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CcCHHHHHHHHHHHcCchhcCCCCCEEEECc
Confidence            789999999999998643  23465443333

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.95  E-value=2.5e-27  Score=199.71  Aligned_cols=220  Identities=18%  Similarity=0.140  Sum_probs=157.4

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      +++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+... .+..... ++..+.+|++|+++++++++      
T Consensus        12 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (260)
T 2zat_A           12 LENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSRKQENVDRTVATLQGEGL-SVTGTVCHVGKAEDRERLVAMAVNLH   89 (260)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999 9999999764433221 1111111 68889999999998888776      


Q ss_pred             -CccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 -GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                       ++|+||||||....     ....+++.+.+++|+.++.++++++.    +.+.++||++||..++.+.+..        
T Consensus        90 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  161 (260)
T 2zat_A           90 GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNL--------  161 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTB--------
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCc--------
Confidence             78999999997531     12234567899999999999988874    4567899999997765433221        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                                  ..|+.+|...+.+.+.++.+.   ++++++++||.+.++....... ............      ...
T Consensus       162 ------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~------~~~  222 (260)
T 2zat_A          162 ------------GPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWM-DKARKEYMKESL------RIR  222 (260)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHS-SHHHHHHHHHHH------TCS
T ss_pred             ------------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhccc-ChHHHHHHHhcC------CCC
Confidence                        579999999999998887664   8999999999999875321000 001111111111      234


Q ss_pred             CcccHHHHHHHHHHhhcCCC--CCce-EEecC
Q 021819          227 GAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~~--~~g~-~~~~~  255 (307)
                      .+++++|+|+++++++..+.  ..|. +++.+
T Consensus       223 ~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdg  254 (260)
T 2zat_A          223 RLGNPEDCAGIVSFLCSEDASYITGETVVVGG  254 (260)
T ss_dssp             SCBCGGGGHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             CCCCHHHHHHHHHHHcCcccCCccCCEEEECC
Confidence            57899999999999886543  3464 55543

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.95  E-value=3.7e-27  Score=198.86  Aligned_cols=206  Identities=18%  Similarity=0.091  Sum_probs=150.0

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      |..+++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+.........++.++.+|++|++++.++++    
T Consensus        24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~  102 (262)
T 3rkr_A           24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLA  102 (262)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHH
Confidence            5556678999999999999999999999999 89999997655433322111111278899999999999888775    


Q ss_pred             ---CccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccc
Q 021819           80 ---GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                         .+|+||||||....     ....+++...+++|+.++.++++++.    +.+.++||++||..+..+.+..      
T Consensus       103 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------  176 (262)
T 3rkr_A          103 AHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADG------  176 (262)
T ss_dssp             HHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTC------
T ss_pred             hcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCC------
Confidence               58999999997322     12334567899999999999999874    3566899999998775544332      


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCc
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (307)
                                    ..|+.+|...+.+.+.++.+   .++++++++||.|.++.......           .      ..
T Consensus       177 --------------~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-----------~------~~  225 (262)
T 3rkr_A          177 --------------AAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSA-----------K------KS  225 (262)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------
T ss_pred             --------------chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccccc-----------c------cc
Confidence                          57999999999999888766   58999999999998875332110           0      01


Q ss_pred             ccCcccHHHHHHHHHHhhcCCCC
Q 021819          225 WLGAVPVKDVAKAQVLLFESPAA  247 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~~~  247 (307)
                      ...+++++|+|+++++++..+..
T Consensus       226 ~~~~~~p~dvA~~v~~l~s~~~~  248 (262)
T 3rkr_A          226 ALGAIEPDDIADVVALLATQADQ  248 (262)
T ss_dssp             ---CCCHHHHHHHHHHHHTCCTT
T ss_pred             cccCCCHHHHHHHHHHHhcCccc
Confidence            34467999999999999986554

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.95  E-value=7.5e-27  Score=195.46  Aligned_cols=217  Identities=18%  Similarity=0.173  Sum_probs=151.9

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC-CCCcc-cccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSH-LFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~-~~~~~-~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      +++|+++||||+|+||+++++.|+++|+ +|++++|+. +..+. +...   .. ++.++++|++|+++++++++     
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~---~~-~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (249)
T 2ew8_A            5 LKDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNL---GR-RVLTVKCDVSQPGDVEAFGKQVIST   79 (249)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHT---TC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCchhHHHHHHHhc---CC-cEEEEEeecCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999 899999976 33221 1111   11 68899999999999888764     


Q ss_pred             --CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                        ++|+||||||.....    ...+++.+.+++|+.++.++++++    ++.+.++||++||..+..+.+..        
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  151 (249)
T 2ew8_A           80 FGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAY--------  151 (249)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSC--------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCc--------
Confidence              789999999976432    233456789999999988888874    55567899999997765443332        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCC-CCCcchHHHHHHHHcCCCCCCCCcc
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQ-PYLNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                                  ..|+.+|...+.+.+.++.+   .|+++++++||.|.++... ......    ...... ..   ...
T Consensus       152 ------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~-~~---~~~  211 (249)
T 2ew8_A          152 ------------THYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAM----FDVLPN-ML---QAI  211 (249)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----------------------C-TT---SSS
T ss_pred             ------------hhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccch----hhHHHH-hh---Ccc
Confidence                        57999999999999888766   4899999999999988643 110000    000110 00   122


Q ss_pred             cCcccHHHHHHHHHHhhcCC--CCCceEEecCC
Q 021819          226 LGAVPVKDVAKAQVLLFESP--AASGRYLCTNG  256 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~  256 (307)
                      ..+.+++|+|+++++++..+  ...|..+..++
T Consensus       212 ~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdG  244 (249)
T 2ew8_A          212 PRLQVPLDLTGAAAFLASDDASFITGQTLAVDG  244 (249)
T ss_dssp             CSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESS
T ss_pred             CCCCCHHHHHHHHHHHcCcccCCCCCcEEEECC
Confidence            35789999999999988643  34465544333

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.95  E-value=4.8e-27  Score=198.89  Aligned_cols=224  Identities=18%  Similarity=0.143  Sum_probs=159.1

Q ss_pred             CccccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-
Q 021819            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-   79 (307)
Q Consensus         1 m~~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-   79 (307)
                      |..++.+++|+++||||+|+||+++++.|+++|+ +|++++|+++..+.+.....    ++.++++|++|+++++++++ 
T Consensus         1 M~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~   75 (270)
T 1yde_A            1 MATGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELP----GAVFILCDVTQEDDVKTLVSE   75 (270)
T ss_dssp             ---CCTTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCT----TEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhc----CCeEEEcCCCCHHHHHHHHHH
Confidence            5445556788999999999999999999999999 89999997654433322111    57889999999999888876 


Q ss_pred             ------CccEEEEeccCCCCC-----CCCChhhhhhhhhHHHHHHHHHHHHhc---CCcEEEEecCcceeccCCCCCCcc
Q 021819           80 ------GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKV  145 (307)
Q Consensus        80 ------~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~iSS~~~~~~~~~~~~~~  145 (307)
                            ++|++|||||.....     ...+++.+.+++|+.++.++++++...   +.++||++||..+.++.+..    
T Consensus        76 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----  151 (270)
T 1yde_A           76 TIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQA----  151 (270)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTC----
T ss_pred             HHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCCC----
Confidence                  689999999975421     123346789999999999999998532   24799999997766554432    


Q ss_pred             cccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCC---CcchHHHHHHHHcCCCC
Q 021819          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKD  219 (307)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~  219 (307)
                                      ..|+.+|...+.+.+.++.+   .|+++++++||.|+++.....   .......+.......+ 
T Consensus       152 ----------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p-  214 (270)
T 1yde_A          152 ----------------VPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQP-  214 (270)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTST-
T ss_pred             ----------------cccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCC-
Confidence                            57999999999999888765   589999999999998742110   0001111111111111 


Q ss_pred             CCCCcccCcccHHHHHHHHHHhhcC-CCCCceEEecC
Q 021819          220 TQEYHWLGAVPVKDVAKAQVLLFES-PAASGRYLCTN  255 (307)
Q Consensus       220 ~~~~~~~~~i~~~dva~~~~~~~~~-~~~~g~~~~~~  255 (307)
                           ...+.+++|+|+++++++.. ....|..+..+
T Consensus       215 -----~~r~~~p~dva~~v~~L~s~~~~itG~~i~vd  246 (270)
T 1yde_A          215 -----LGRMGQPAEVGAAAVFLASEANFCTGIELLVT  246 (270)
T ss_dssp             -----TSSCBCHHHHHHHHHHHHHHCTTCCSCEEEES
T ss_pred             -----CCCCcCHHHHHHHHHHHcccCCCcCCCEEEEC
Confidence                 23467999999999988864 23446544333

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.95  E-value=8e-27  Score=198.17  Aligned_cols=222  Identities=13%  Similarity=0.063  Sum_probs=160.4

Q ss_pred             cCCcEEEEeCCc--hhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            7 KEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         7 ~~~~~ilItGat--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      +++|+++||||+  |+||+++++.|+++|+ +|++++|+....+.+..+..... ++.++++|++|++++.++++     
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~   81 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELN-SPYVYELDVSKEEHFKSLYNSVKKD   81 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEcCCCCHHHHHHHHHHHHHH
Confidence            457899999999  9999999999999999 89999997652222222211111 46789999999999888776     


Q ss_pred             --CccEEEEeccCCCC--------CCCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcccc
Q 021819           80 --GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        80 --~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                        ++|+||||||....        ....+++...+++|+.++.++++++...  ..++||++||..+..+.+..      
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~------  155 (275)
T 2pd4_A           82 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHY------  155 (275)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTC------
T ss_pred             cCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCCc------
Confidence              67999999997642        2233456889999999999999999775  12689999997765443332      


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCc
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (307)
                                    ..|+.+|...+.+.+.++.+.   |+++++++||.|.++...... .............+      
T Consensus       156 --------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p------  214 (275)
T 2pd4_A          156 --------------NVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIA-DFRMILKWNEINAP------  214 (275)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGST-THHHHHHHHHHHST------
T ss_pred             --------------hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhcc-ccHHHHHHHHhcCC------
Confidence                          569999999999998887664   899999999999998643321 11222222222221      


Q ss_pred             ccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          225 WLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                      ...+.+++|+|+++++++...  ...|.++..+++
T Consensus       215 ~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg  249 (275)
T 2pd4_A          215 LRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAG  249 (275)
T ss_dssp             TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            234679999999999998643  335665444443

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.95  E-value=7.4e-27  Score=197.75  Aligned_cols=220  Identities=19%  Similarity=0.174  Sum_probs=159.9

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCC-CCccccc-CCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~-~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++.+++.. ..+.+.. +..... ++.++.+|++|+++++++++    
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~  105 (271)
T 3v2g_A           28 SLAGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAGG-RAVAIRADNRDAEAIEQAIRETVE  105 (271)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHH
Confidence            35678999999999999999999999999 8888766542 2222211 111112 78899999999999888876    


Q ss_pred             ---CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceecc-CCCCCCcccccC
Q 021819           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVP-NPGWKGKVFDET  149 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~-~~~~~~~~~~E~  149 (307)
                         ++|++|||||.....    ...+++.+.+++|+.++.++++++...  ..++||++||..+... .+..        
T Consensus       106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~~~--------  177 (271)
T 3v2g_A          106 ALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPGI--------  177 (271)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCSTTC--------
T ss_pred             HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCCCc--------
Confidence               789999999976532    234456889999999999999999765  3468999998654332 1221        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                                  ..|+.+|...+.+.+.++.+.   |+++++++||.|.++.........    .......+      ..
T Consensus       178 ------------~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~----~~~~~~~~------~~  235 (271)
T 3v2g_A          178 ------------SLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHA----EAQRERIA------TG  235 (271)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSH----HHHHHTCT------TS
T ss_pred             ------------hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhH----HHHHhcCC------CC
Confidence                        579999999999998887764   899999999999998765432222    12222222      34


Q ss_pred             CcccHHHHHHHHHHhhcC--CCCCceEEecCCc
Q 021819          227 GAVPVKDVAKAQVLLFES--PAASGRYLCTNGI  257 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~  257 (307)
                      .+.+++|+|+++++++..  ....|..+..+++
T Consensus       236 r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG  268 (271)
T 3v2g_A          236 SYGEPQDIAGLVAWLAGPQGKFVTGASLTIDGG  268 (271)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCHHHHHHHHHHHhCcccCCccCCEEEeCcC
Confidence            567999999999998854  3345765544443

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.95  E-value=4.1e-27  Score=196.86  Aligned_cols=218  Identities=17%  Similarity=0.133  Sum_probs=159.2

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCC-CCCCceEEEEcccCChhHHHHHhc-----
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPG-AGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~-~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      +++|+++||||+|+||++++++|+++|+ +|++++|+.+..+.+.. +.. ... ++.++.+|++|+++++++++     
T Consensus         5 ~~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   82 (248)
T 2pnf_A            5 LQGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGTSGERAKAVAEEIANKYGV-KAHGVEMNLLSEESINKAFEEIYNL   82 (248)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHCC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhcCC-ceEEEEccCCCHHHHHHHHHHHHHh
Confidence            4578999999999999999999999999 99999997544332211 100 011 68899999999999988886     


Q ss_pred             --CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                        ++|+||||||.....    ...+++.+.+++|+.++.++++++    ++.+.++||++||..+.++.+..        
T Consensus        83 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--------  154 (248)
T 2pnf_A           83 VDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQ--------  154 (248)
T ss_dssp             SSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTC--------
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCC--------
Confidence              789999999976532    123356789999999997777765    44567899999997766554332        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                                  ..|+.+|...+.+.+.++++   .+++++++|||.++++.....   ............+      ..
T Consensus       155 ------------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~------~~  213 (248)
T 2pnf_A          155 ------------VNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVL---SEEIKQKYKEQIP------LG  213 (248)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS---CHHHHHHHHHTCT------TS
T ss_pred             ------------chHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhc---cHHHHHHHHhcCC------CC
Confidence                        56999999999998887765   489999999999998864322   1122222222222      24


Q ss_pred             CcccHHHHHHHHHHhhcCC--CCCce-EEecC
Q 021819          227 GAVPVKDVAKAQVLLFESP--AASGR-YLCTN  255 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~--~~~g~-~~~~~  255 (307)
                      .+++++|+|+++++++...  ...|. |++.+
T Consensus       214 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  245 (248)
T 2pnf_A          214 RFGSPEEVANVVLFLCSELASYITGEVIHVNG  245 (248)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CccCHHHHHHHHHHHhCchhhcCCCcEEEeCC
Confidence            5789999999999998753  23354 55554

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.95  E-value=3.6e-28  Score=210.20  Aligned_cols=231  Identities=15%  Similarity=0.144  Sum_probs=163.0

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC-----cccccCCCCCCCceEEEEcccCChhHHHHHhcCccE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-----SHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~   83 (307)
                      ||+|+||||||+||++|++.|+++|+ +|++++|+....     +.+..+..   .+++++.+|++|++++.++++++|+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~d~~~l~~~~~~~d~   79 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPEVVSNIDKVQMLLYFKQ---LGAKLIEASLDDHQRLVDALKQVDV   79 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSCCSSCHHHHHHHHHHHT---TTCEEECCCSSCHHHHHHHHTTCSE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCC-cEEEEECCCcccchhHHHHHHHHHh---CCeEEEeCCCCCHHHHHHHHhCCCE
Confidence            56899999999999999999999998 999999975432     11111111   1788999999999999999999999


Q ss_pred             EEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcC-CcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCc
Q 021819           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (307)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (307)
                      |||+++....           ..|+.++.+++++|++.| +++||+ |+.+.   ...   .+   +.+..|.     ..
T Consensus        80 vi~~a~~~~~-----------~~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~---~~~---~~---~~~~~p~-----~~  133 (313)
T 1qyd_A           80 VISALAGGVL-----------SHHILEQLKLVEAIKEAGNIKRFLP-SEFGM---DPD---IM---EHALQPG-----SI  133 (313)
T ss_dssp             EEECCCCSSS-----------STTTTTHHHHHHHHHHSCCCSEEEC-SCCSS---CTT---SC---CCCCSST-----TH
T ss_pred             EEECCccccc-----------hhhHHHHHHHHHHHHhcCCCceEEe-cCCcC---Ccc---cc---ccCCCCC-----cc
Confidence            9999987532           136778999999999998 999986 53221   111   10   1111111     14


Q ss_pred             cHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCC---CCCcccCcccHHHHHHHHH
Q 021819          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT---QEYHWLGAVPVKDVAKAQV  239 (307)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~dva~~~~  239 (307)
                      .| .+|..+|++++    +.+++++++||+.++++..........   .....+....   .++..+++++++|+|++++
T Consensus       134 ~y-~sK~~~e~~~~----~~g~~~~ilrp~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~  205 (313)
T 1qyd_A          134 TF-IDKRKVRRAIE----AASIPYTYVSSNMFAGYFAGSLAQLDG---HMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTI  205 (313)
T ss_dssp             HH-HHHHHHHHHHH----HTTCCBCEEECCEEHHHHTTTSSCTTC---CSSCCSSEECCBTTSCSEEEEECHHHHHHHHH
T ss_pred             hH-HHHHHHHHHHH----hcCCCeEEEEeceeccccccccccccc---cccCCCCeEEEeCCCCceEEEEEHHHHHHHHH
Confidence            58 99999999886    569999999999988753321110000   0001111111   1346789999999999999


Q ss_pred             HhhcCCCCCc-eEEec--CCcccHHHHHHHHHHhCCCCCCCc
Q 021819          240 LLFESPAASG-RYLCT--NGIYQFGDFAERVSKLFPEFPVHR  278 (307)
Q Consensus       240 ~~~~~~~~~g-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  278 (307)
                      .+++++...| .|++.  ++.+|+.|+++.+.+.+ +.+++.
T Consensus       206 ~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~-g~~~~~  246 (313)
T 1qyd_A          206 KSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLS-EQNLDK  246 (313)
T ss_dssp             HHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHH-TCCCEE
T ss_pred             HHHhCcccCCceEEEeCCCCccCHHHHHHHHHHhc-CCCCce
Confidence            9998875444 45543  35799999999999999 555443

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.95  E-value=1.8e-27  Score=202.27  Aligned_cols=225  Identities=16%  Similarity=0.079  Sum_probs=163.1

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++.+|+.+...... .+......++.++++|++|+++++++++     
T Consensus        24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  102 (277)
T 4fc7_A           24 LLRDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKE  102 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45689999999999999999999999999 9999999765432221 1110001168899999999999888776     


Q ss_pred             --CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                        ++|+||||||.....    ...+.+.+.+++|+.++.++++++.    +.+.++||++||..+..+.+..        
T Consensus       103 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  174 (277)
T 4fc7_A          103 FGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQ--------  174 (277)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTC--------
T ss_pred             cCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCc--------
Confidence              689999999965431    2344568899999999999999884    3345799999998776655443        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                                  ..|+.+|...+.+.+.++.+.   |+++++++||.|.++....................+      ..
T Consensus       175 ------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p------~~  236 (277)
T 4fc7_A          175 ------------VHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASP------LQ  236 (277)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTST------TS
T ss_pred             ------------HHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCC------CC
Confidence                        579999999999998887764   899999999999886421110011222333333322      34


Q ss_pred             CcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          227 GAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                      .+.+++|+|+++++++...  ...|..+..+++
T Consensus       237 r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG  269 (277)
T 4fc7_A          237 RLGNKTEIAHSVLYLASPLASYVTGAVLVADGG  269 (277)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHcCCccCCcCCCEEEECCC
Confidence            5789999999999998743  345765544444

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.95  E-value=2.4e-26  Score=190.93  Aligned_cols=200  Identities=18%  Similarity=0.150  Sum_probs=138.1

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCC-CCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      .||+|+||||+|+||++|++.|+++| + +|++++|+++....+..      .++.++.+|++|++++.++++++|+|||
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~-~V~~~~R~~~~~~~~~~------~~~~~~~~Dl~d~~~~~~~~~~~D~vv~   94 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLADKQTI-KQTLFARQPAKIHKPYP------TNSQIIMGDVLNHAALKQAMQGQDIVYA   94 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTE-EEEEEESSGGGSCSSCC------TTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHhCCCc-eEEEEEcChhhhccccc------CCcEEEEecCCCHHHHHHHhcCCCEEEE
Confidence            36899999999999999999999999 7 99999998765443322      1789999999999999999999999999


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHH
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (307)
                      +++....              ...+.++++++++.++++||++||..++...+.. .....|..+.          .+..
T Consensus        95 ~a~~~~~--------------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~-~~~~~~~~~~----------~~~~  149 (236)
T 3qvo_A           95 NLTGEDL--------------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGK-FVEWNNAVIG----------EPLK  149 (236)
T ss_dssp             ECCSTTH--------------HHHHHHHHHHHHHTTCCEEEEECCCCC-----------------C----------GGGH
T ss_pred             cCCCCch--------------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCcc-cccchhhccc----------chHH
Confidence            9985211              2357799999999999999999997654332221 1112222211          1223


Q ss_pred             HHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCCC
Q 021819          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA  246 (307)
Q Consensus       167 sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~  246 (307)
                      .+..+|+.++    +.+++++++|||.++++...... ..       ..+.     .....+++++|+|+++++++..+.
T Consensus       150 ~~~~~~~~l~----~~gi~~~~vrPg~i~~~~~~~~~-~~-------~~~~-----~~~~~~i~~~DvA~~i~~ll~~~~  212 (236)
T 3qvo_A          150 PFRRAADAIE----ASGLEYTILRPAWLTDEDIIDYE-LT-------SRNE-----PFKGTIVSRKSVAALITDIIDKPE  212 (236)
T ss_dssp             HHHHHHHHHH----TSCSEEEEEEECEEECCSCCCCE-EE-------CTTS-----CCSCSEEEHHHHHHHHHHHHHSTT
T ss_pred             HHHHHHHHHH----HCCCCEEEEeCCcccCCCCcceE-Ee-------ccCC-----CCCCcEECHHHHHHHHHHHHcCcc
Confidence            3444455543    67999999999999987543210 00       0000     012357999999999999999876


Q ss_pred             -CCc-eEEecCC
Q 021819          247 -ASG-RYLCTNG  256 (307)
Q Consensus       247 -~~g-~~~~~~~  256 (307)
                       ..| .|++.+.
T Consensus       213 ~~~g~~~~i~~~  224 (236)
T 3qvo_A          213 KHIGENIGINQP  224 (236)
T ss_dssp             TTTTEEEEEECS
T ss_pred             cccCeeEEecCC
Confidence             234 5666543

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.95  E-value=1.7e-27  Score=201.11  Aligned_cols=221  Identities=15%  Similarity=0.169  Sum_probs=160.5

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++.+|+.+..+.+.........++.++++|++|+++++++++      
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY   86 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35688999999999999999999999999 89999997654433322111111278899999999999888876      


Q ss_pred             -CccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 -GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                       ++|++|||||....     ....+++.+.+++|+.++.++++++..    .+ ++||++||..+..+.+..        
T Consensus        87 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~--------  157 (264)
T 3ucx_A           87 GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKY--------  157 (264)
T ss_dssp             SCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTC--------
T ss_pred             CCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCcc--------
Confidence             68999999987532     223345688999999999999998743    34 699999998776554432        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCc--------chHHHHHHHHcCCC
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN--------ASCAVLQQLLQGSK  218 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~--------~~~~~~~~~~~~~~  218 (307)
                                  ..|+.+|...+.+.+.++.+   .|+++++++||.|+++.......        ....+......+. 
T Consensus       158 ------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  224 (264)
T 3ucx_A          158 ------------GAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGS-  224 (264)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTS-
T ss_pred             ------------HHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccC-
Confidence                        57999999999999888776   58999999999998875321100        0112222222222 


Q ss_pred             CCCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEec
Q 021819          219 DTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCT  254 (307)
Q Consensus       219 ~~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~  254 (307)
                           ....+.+++|+|+++++++...  ...|..+..
T Consensus       225 -----p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~v  257 (264)
T 3ucx_A          225 -----DLKRLPTEDEVASAILFMASDLASGITGQALDV  257 (264)
T ss_dssp             -----SSSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             -----CcccCCCHHHHHHHHHHHcCccccCCCCCEEEE
Confidence                 2456789999999999988643  345654433

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.95  E-value=2.1e-27  Score=201.64  Aligned_cols=221  Identities=19%  Similarity=0.161  Sum_probs=158.8

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeC-CCCCCcccc-cCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r-~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      +++|+|+||||+|+||++++++|+++|+ +|++++| +....+.+. .+..... ++.++.+|++|++++.++++     
T Consensus        19 ~~~k~vlItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   96 (274)
T 1ja9_A           19 LAGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGA-QGVAIQADISKPSEVVALFDKAVSH   96 (274)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999 8999888 433222211 1111111 68899999999999988876     


Q ss_pred             --CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc---CCcEEEEecCccee-ccCCCCCCcccccC
Q 021819           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAI-VPNPGWKGKVFDET  149 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~iSS~~~~-~~~~~~~~~~~~E~  149 (307)
                        ++|+||||||.....    ...+.+...+++|+.++.++++++.+.   + ++||++||..++ .+.+..        
T Consensus        97 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~--------  167 (274)
T 1ja9_A           97 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGIPNH--------  167 (274)
T ss_dssp             HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSCCSC--------
T ss_pred             cCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCCCCC--------
Confidence              789999999976431    223345789999999999999998765   4 799999997764 232221        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCC---------cch-HHHHHHHHcC
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYL---------NAS-CAVLQQLLQG  216 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~---------~~~-~~~~~~~~~~  216 (307)
                                  ..|+.+|.+.|.+.+.++++.   +++++++|||.++++......         ... .........+
T Consensus       168 ------------~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (274)
T 1ja9_A          168 ------------ALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANM  235 (274)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHT
T ss_pred             ------------chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhc
Confidence                        569999999999999887764   899999999999886432100         001 1222222222


Q ss_pred             CCCCCCCcccCcccHHHHHHHHHHhhcCCC--CCc-eEEecCC
Q 021819          217 SKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASG-RYLCTNG  256 (307)
Q Consensus       217 ~~~~~~~~~~~~i~~~dva~~~~~~~~~~~--~~g-~~~~~~~  256 (307)
                      .      ...++++++|+|+++++++..+.  ..| .|++.++
T Consensus       236 ~------~~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG  272 (274)
T 1ja9_A          236 N------PLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG  272 (274)
T ss_dssp             S------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             C------CCCCccCHHHHHHHHHHHhCcccccccCcEEEecCC
Confidence            2      23568999999999999997543  245 4665543

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.95  E-value=3.2e-27  Score=197.94  Aligned_cols=212  Identities=15%  Similarity=0.117  Sum_probs=148.1

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ..++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+.........++.++++|++|++++.++++      
T Consensus         4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g   82 (252)
T 3h7a_A            4 TPRNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHA   82 (252)
T ss_dssp             -CCSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhC
Confidence            35678999999999999999999999999 89999998766544332111111278999999999999988886      


Q ss_pred             CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                      ++|++|||||....    ....+++.+.+++|+.++.++++++    ++.+.++||++||..+..+.+..          
T Consensus        83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  152 (252)
T 3h7a_A           83 PLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGF----------  152 (252)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTC----------
T ss_pred             CceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCC----------
Confidence            67999999997654    2233456889999999999998887    44556799999998776554442          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcE-EEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccC
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDV-VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~-~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                                ..|+.+|...+.+.+.++.+   .|+++ ++++||.|.++.......   .........       ....
T Consensus       153 ----------~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~---~~~~~~~~~-------~~~~  212 (252)
T 3h7a_A          153 ----------AAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERRE---QMFGKDALA-------NPDL  212 (252)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------------------------------------
T ss_pred             ----------ccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccch---hhhhhhhhc-------CCcc
Confidence                      57999999999998888766   48999 899999998876543211   111111111       1122


Q ss_pred             cccHHHHHHHHHHhhcCCCCC
Q 021819          228 AVPVKDVAKAQVLLFESPAAS  248 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~~~~  248 (307)
                      +.+++|+|+++++++..+...
T Consensus       213 ~~~pedvA~~~~~l~s~~~~~  233 (252)
T 3h7a_A          213 LMPPAAVAGAYWQLYQQPKSA  233 (252)
T ss_dssp             -CCHHHHHHHHHHHHHCCGGG
T ss_pred             CCCHHHHHHHHHHHHhCchhc
Confidence            889999999999999876543

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.95  E-value=7.6e-27  Score=199.33  Aligned_cols=218  Identities=16%  Similarity=0.144  Sum_probs=156.7

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      +++|+|+||||+|+||+++++.|+++|+ +|++++|+.+..+.+.. +..... ++.++.+|++|+++++++++      
T Consensus        42 l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~  119 (285)
T 2c07_A           42 GENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGY-ESSGYAGDVSKKEEISEVINKILTEH  119 (285)
T ss_dssp             CSSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCC-ceeEEECCCCCHHHHHHHHHHHHHhc
Confidence            4568999999999999999999999999 89888886544332211 111112 68899999999999888874      


Q ss_pred             -CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                       ++|+||||||.....    ...+++.+.+++|+.++.++++++.    +.+.++||++||..+.++.+..         
T Consensus       120 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~---------  190 (285)
T 2c07_A          120 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQ---------  190 (285)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC---------
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCC---------
Confidence             689999999976432    2234567899999999888888774    4566899999998776554432         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                                 ..|+.+|...+.+.+.++.+   .++++++++||.+.++.....   ............+      ...
T Consensus       191 -----------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~------~~~  250 (285)
T 2c07_A          191 -----------ANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI---SEQIKKNIISNIP------AGR  250 (285)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C---CHHHHHHHHTTCT------TSS
T ss_pred             -----------chHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhc---CHHHHHHHHhhCC------CCC
Confidence                       57999999999998888765   389999999999998864432   1222233322222      235


Q ss_pred             cccHHHHHHHHHHhhcCCC--CCceE-EecC
Q 021819          228 AVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~~--~~g~~-~~~~  255 (307)
                      +++++|+|+++++++..+.  ..|.. ++.+
T Consensus       251 ~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~g  281 (285)
T 2c07_A          251 MGTPEEVANLACFLSSDKSGYINGRVFVIDG  281 (285)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCHHHHHHHHHHHhCCCcCCCCCCEEEeCC
Confidence            7899999999999987543  34654 4443

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.95  E-value=3.3e-27  Score=198.95  Aligned_cols=223  Identities=18%  Similarity=0.154  Sum_probs=154.9

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC-Cccccc-CCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ++|+++||||+|+||+++++.|+++|+ +|++++|+.+. .+.+.. +......++.++.+|++|++++.++++      
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            468999999999999999999999999 89999987654 322211 100001168889999999999888876      


Q ss_pred             -CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                       ++|++|||||.....    ...+++...+++|+.++.++++++.    +.+.++||++||..+..+.+..         
T Consensus        82 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  152 (260)
T 1x1t_A           82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANK---------  152 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC---------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCC---------
Confidence             689999999976432    2334568899999999999988884    3466899999997765543332         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcch--------HHHHHHH-HcCCC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNAS--------CAVLQQL-LQGSK  218 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~--------~~~~~~~-~~~~~  218 (307)
                                 ..|+.+|...+.+.+.++.+.   |+++++++||.|.++.........        ....... ...  
T Consensus       153 -----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  219 (260)
T 1x1t_A          153 -----------SAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEK--  219 (260)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHH--
T ss_pred             -----------chHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhcc--
Confidence                       579999999999998887664   899999999999998643221000        0000000 000  


Q ss_pred             CCCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          219 DTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       219 ~~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                          .....+.+++|+|+++++++...  ...|..+..+++
T Consensus       220 ----~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG  256 (260)
T 1x1t_A          220 ----QPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG  256 (260)
T ss_dssp             ----CTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ----CCCCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCC
Confidence                02345789999999999998643  244654444433

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.95  E-value=1.9e-27  Score=202.52  Aligned_cols=224  Identities=14%  Similarity=0.142  Sum_probs=158.5

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCC--CCceEEEEcccCChhHHHHHhc---
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAG--DANLRVFEADVLDSGAVSRAVE---   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~--~~~~~~i~~D~~d~~~~~~~~~---   79 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+.. +....  ..++.++.+|++|+++++++++   
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL   81 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999 89999997654333221 11111  0157899999999999888776   


Q ss_pred             ----CccEEEEeccCCCCCC--------CCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccC-CCCC
Q 021819           80 ----GCKGVFHVASPCTLED--------PVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPN-PGWK  142 (307)
Q Consensus        80 ----~~d~vi~~a~~~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~-~~~~  142 (307)
                          ++|+||||||......        ..+.+.+.+++|+.++.++++++..    .+ ++||++||..+..+. +.. 
T Consensus        82 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~-  159 (280)
T 1xkq_A           82 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDF-  159 (280)
T ss_dssp             HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSS-
T ss_pred             HhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCcc-
Confidence                6899999999764321        2334688999999999999998854    34 799999997664432 221 


Q ss_pred             CcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCC--cc----hHHHHHHH
Q 021819          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL--NA----SCAVLQQL  213 (307)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~--~~----~~~~~~~~  213 (307)
                                         ..|+.+|...+.+.+.++.+   .|+++++++||.|+++......  ..    ........
T Consensus       160 -------------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  220 (280)
T 1xkq_A          160 -------------------LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASH  220 (280)
T ss_dssp             -------------------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHC
T ss_pred             -------------------cHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHH
Confidence                               56999999999998888754   5899999999999998532210  00    00111111


Q ss_pred             HcCCCCCCCCcccCcccHHHHHHHHHHhhcCC---CCCceEEecCCc
Q 021819          214 LQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP---AASGRYLCTNGI  257 (307)
Q Consensus       214 ~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~---~~~g~~~~~~~~  257 (307)
                      ....      ....+.+++|+|+++++++..+   ...|..+..+++
T Consensus       221 ~~~~------p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG  261 (280)
T 1xkq_A          221 KECI------PIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGG  261 (280)
T ss_dssp             TTTC------TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred             HcCC------CCCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCC
Confidence            1111      1345789999999999988643   345665444444

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.95  E-value=1.7e-27  Score=204.83  Aligned_cols=217  Identities=18%  Similarity=0.134  Sum_probs=154.1

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      .+++|+++||||+|+||++++++|+++|+ +|++++|+.+..+.+.. +..... ++.++.+|++|.+++.++++     
T Consensus        28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~  105 (301)
T 3tjr_A           28 GFDGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGF-DAHGVVCDVRHLDEMVRLADEAFRL  105 (301)
T ss_dssp             CSTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHh
Confidence            46788999999999999999999999999 89999997655443322 111112 78899999999999888876     


Q ss_pred             --CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHh----cC-CcEEEEecCcceeccCCCCCCccccc
Q 021819           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                        ++|+||||||....    ....+++.+.+++|+.++.++++++..    .+ .++||++||..+..+.+..       
T Consensus       106 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  178 (301)
T 3tjr_A          106 LGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGL-------  178 (301)
T ss_dssp             HSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTB-------
T ss_pred             CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCc-------
Confidence              68999999997643    223345688999999999999998743    34 5799999998876554432       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCC-CC--C
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD-TQ--E  222 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~-~~--~  222 (307)
                                   ..|+.||.+.+.+.+.++.+.   |+++++++||.|.++.........  .........+. .+  .
T Consensus       179 -------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~~~~~~~~  243 (301)
T 3tjr_A          179 -------------GTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIR--GADYGMSATPEGAFGPL  243 (301)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC-------------------
T ss_pred             -------------hHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCcccccccccccccc--chhhccccChhhhcccc
Confidence                         579999999999988887664   899999999999876422110000  00000000000 00  1


Q ss_pred             CcccCcccHHHHHHHHHHhhcCCC
Q 021819          223 YHWLGAVPVKDVAKAQVLLFESPA  246 (307)
Q Consensus       223 ~~~~~~i~~~dva~~~~~~~~~~~  246 (307)
                      .....+++++|+|++++.+++.+.
T Consensus       244 ~~~~~~~~pedvA~~i~~~l~~~~  267 (301)
T 3tjr_A          244 PTQDESVSADDVARLTADAILANR  267 (301)
T ss_dssp             -----CCCHHHHHHHHHHHHHHTC
T ss_pred             ccccCCCCHHHHHHHHHHHHhcCC
Confidence            133468899999999999998764

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.95  E-value=4.3e-27  Score=198.34  Aligned_cols=224  Identities=17%  Similarity=0.174  Sum_probs=153.4

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      ++++++|+++||||+|+||++++++|+++|+ +|++++|+.+..+.+....   ..++.++.+|++|.++++++++    
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEI---GDAALAVAADISKEADVDAAVEAALS   79 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            3456788999999999999999999999999 8999999766544433211   1168899999999999888876    


Q ss_pred             ---CccEEEEeccCCCCC-----CCCChhhhhhhhhHHHHHHHHHHHHhc----C----CcEEEEecCcceeccCCCCCC
Q 021819           80 ---GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAKRF----G----VRRVVVTSSISAIVPNPGWKG  143 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~----~~~~v~iSS~~~~~~~~~~~~  143 (307)
                         ++|++|||||.....     ...+++.+.+++|+.++.++++++...    +    .++||++||..+..+.+..  
T Consensus        80 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~--  157 (261)
T 3n74_A           80 KFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNL--  157 (261)
T ss_dssp             HHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTC--
T ss_pred             hcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCc--
Confidence               679999999976521     133456789999999999998887432    1    4579999997765443332  


Q ss_pred             cccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcc-hHHHHHHHHcCCCC
Q 021819          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNA-SCAVLQQLLQGSKD  219 (307)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~-~~~~~~~~~~~~~~  219 (307)
                                        ..|+.+|.+.+.+.+.++.+   .++++++++||.+.++........ ...........   
T Consensus       158 ------------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---  216 (261)
T 3n74_A          158 ------------------AWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDS---  216 (261)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------------------------
T ss_pred             ------------------cHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhc---
Confidence                              56999999999999888776   589999999999998865432110 11111111111   


Q ss_pred             CCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          220 TQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       220 ~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                         .....+++++|+|+++++++...  ...|..+..+++
T Consensus       217 ---~~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG  253 (261)
T 3n74_A          217 ---IPMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDGG  253 (261)
T ss_dssp             ---CTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ---CCcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecCC
Confidence               12456889999999999988543  345765444443

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.95  E-value=2.8e-27  Score=202.98  Aligned_cols=225  Identities=16%  Similarity=0.163  Sum_probs=158.2

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCC--CCceEEEEcccCChhHHHHHhc-
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAG--DANLRVFEADVLDSGAVSRAVE-   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~--~~~~~~i~~D~~d~~~~~~~~~-   79 (307)
                      |+.+++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+.. +....  ..++.++.+|++|+++++++++ 
T Consensus        21 m~~l~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   99 (297)
T 1xhl_A           21 MARFSGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINT   99 (297)
T ss_dssp             --CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHH
Confidence            5556678999999999999999999999999 89999997654332211 11000  0157889999999999888876 


Q ss_pred             ------CccEEEEeccCCCCC------CCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccC-CCCC
Q 021819           80 ------GCKGVFHVASPCTLE------DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPN-PGWK  142 (307)
Q Consensus        80 ------~~d~vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~-~~~~  142 (307)
                            ++|+||||||.....      ...+++.+.+++|+.++.++++++..    .+ ++||++||..+..+. +.. 
T Consensus       100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~~-  177 (297)
T 1xhl_A          100 TLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGY-  177 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTTS-
T ss_pred             HHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCCc-
Confidence                  689999999975432      12345678999999999999998854    35 799999997664432 221 


Q ss_pred             CcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCC-cc-----hHHHHHHH
Q 021819          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL-NA-----SCAVLQQL  213 (307)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~-~~-----~~~~~~~~  213 (307)
                                         ..|+.+|...+.+.+.++.+   .|+++++++||.|.++...... ..     ........
T Consensus       178 -------------------~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  238 (297)
T 1xhl_A          178 -------------------PYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSR  238 (297)
T ss_dssp             -------------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHC
T ss_pred             -------------------chHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHH
Confidence                               56999999999998888754   5899999999999987532110 00     00111111


Q ss_pred             HcCCCCCCCCcccCcccHHHHHHHHHHhhcCC---CCCceEEecCC
Q 021819          214 LQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP---AASGRYLCTNG  256 (307)
Q Consensus       214 ~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~---~~~g~~~~~~~  256 (307)
                      ....      ....+.+++|+|+++++++..+   ...|..+..++
T Consensus       239 ~~~~------p~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdG  278 (297)
T 1xhl_A          239 KECI------PVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADG  278 (297)
T ss_dssp             TTTC------TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred             HhcC------CCCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECC
Confidence            1111      1245789999999999998654   44566544333

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.95  E-value=9.3e-27  Score=191.68  Aligned_cols=207  Identities=15%  Similarity=0.080  Sum_probs=156.1

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc---C
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---G   80 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~---~   80 (307)
                      |+.+++|+++||||+|+||+++++.|+++|+ +|++.+|+..                    +|++|+++++++++   +
T Consensus         1 M~~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~--------------------~D~~~~~~v~~~~~~~g~   59 (223)
T 3uce_A            1 MMGSDKTVYVVLGGTSGIGAELAKQLESEHT-IVHVASRQTG--------------------LDISDEKSVYHYFETIGA   59 (223)
T ss_dssp             ----CCEEEEEETTTSHHHHHHHHHHCSTTE-EEEEESGGGT--------------------CCTTCHHHHHHHHHHHCS
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEecCCcc--------------------cCCCCHHHHHHHHHHhCC
Confidence            4556688999999999999999999999999 8999887532                    79999999988876   6


Q ss_pred             ccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHHHhcC--CcEEEEecCcceeccCCCCCCcccccCCCCc
Q 021819           81 CKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKRFG--VRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (307)
Q Consensus        81 ~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~  153 (307)
                      +|++|||||....     +...+++.+.+++|+.++.++++++...-  .++||++||..+..+.+..            
T Consensus        60 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~------------  127 (223)
T 3uce_A           60 FDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVANT------------  127 (223)
T ss_dssp             EEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTTC------------
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCCc------------
Confidence            8999999997632     22334567889999999999999997652  2589999997765543332            


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHhcC-CcEEEEecCceeCCCCCCCCcc-hHHHHHHHHcCCCCCCCCcccCcccH
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKHG-VDVVAIHPATCLGPLMQPYLNA-SCAVLQQLLQGSKDTQEYHWLGAVPV  231 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~-i~~~ivrp~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~  231 (307)
                              ..|+.+|...+.+.+.++.+.+ +++++++||.|.++........ ...+........+      ...+.++
T Consensus       128 --------~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~  193 (223)
T 3uce_A          128 --------YVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLP------VGKVGEA  193 (223)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHST------TCSCBCH
T ss_pred             --------hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCC------CCCccCH
Confidence                    5799999999999999888764 9999999999999865543221 1122222222222      3467899


Q ss_pred             HHHHHHHHHhhcCCCCCceEEecCCc
Q 021819          232 KDVAKAQVLLFESPAASGRYLCTNGI  257 (307)
Q Consensus       232 ~dva~~~~~~~~~~~~~g~~~~~~~~  257 (307)
                      +|+|+++++++.+....|..+..+++
T Consensus       194 ~dvA~~~~~l~~~~~~tG~~i~vdgG  219 (223)
T 3uce_A          194 SDIAMAYLFAIQNSYMTGTVIDVDGG  219 (223)
T ss_dssp             HHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHccCCCCCCcEEEecCC
Confidence            99999999999877777875544443

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.95  E-value=1e-26  Score=201.65  Aligned_cols=228  Identities=20%  Similarity=0.151  Sum_probs=153.8

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC--c---ccccCCCCCCCceEEEEcccCChhHHHHHhc---
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--S---HLFALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~---~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~---   79 (307)
                      ++|+++||||+|+||+++++.|+++|+ +|++.+|+....  +   .+.........++.++.+|++|++++.++++   
T Consensus         4 ~~k~vlVTGas~GIG~aia~~L~~~G~-~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~   82 (324)
T 3u9l_A            4 SKKIILITGASSGFGRLTAEALAGAGH-RVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII   82 (324)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            367999999999999999999999999 999988863221  1   1111100001168999999999999988887   


Q ss_pred             ----CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccc
Q 021819           80 ----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        80 ----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                          ++|+||||||.....    ...+++.+.+++|+.|+.++++++    ++.+.++||++||+.+.......      
T Consensus        83 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~------  156 (324)
T 3u9l_A           83 GEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPY------  156 (324)
T ss_dssp             HHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSS------
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCc------
Confidence                789999999976432    233456788999999999999998    66677899999997765332111      


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCC---CcchHHHHHHHHcCCCCCC
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDTQ  221 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~  221 (307)
                                   ...|+.||.+.+.+.+.++.+   .|+++++|+||.|.++.....   ...................
T Consensus       157 -------------~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (324)
T 3u9l_A          157 -------------LAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGL  223 (324)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTH
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCC
Confidence                         156999999999999988776   599999999999987643221   0111111111111111111


Q ss_pred             CC--------cccCcccHHHHHHHHHHhhcCCCCC-c-eEEecC
Q 021819          222 EY--------HWLGAVPVKDVAKAQVLLFESPAAS-G-RYLCTN  255 (307)
Q Consensus       222 ~~--------~~~~~i~~~dva~~~~~~~~~~~~~-g-~~~~~~  255 (307)
                      +.        ...+..+++|+|++++.+++.+... . .+.+..
T Consensus       224 ~~~~~~~~~~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~gp  267 (324)
T 3u9l_A          224 GEEIKKAFAAIVPPDADVSLVADAIVRVVGTASGKRPFRVHVDP  267 (324)
T ss_dssp             HHHHHHHHHHTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEECT
T ss_pred             HHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEeCC
Confidence            11        1122368899999999999887532 2 345543

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.95  E-value=3.7e-27  Score=198.61  Aligned_cols=223  Identities=14%  Similarity=0.091  Sum_probs=155.4

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCC-CCCceEEEEcccCChhHHHHHhc-----
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGA-GDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      +++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+.. +... ...++.++.+|++|+++++++++     
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (260)
T 2z1n_A            5 IQGKLAVVTAGSSGLGFASALELARNGA-RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDL   83 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            4578999999999999999999999999 89999997644332211 1000 01157889999999999988886     


Q ss_pred             -CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                       ++|+||||||.....    ...+++.+.+++|+.++.++.+++    ++.+.++||++||..+..+.+..         
T Consensus        84 ~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  154 (260)
T 2z1n_A           84 GGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDL---------  154 (260)
T ss_dssp             TCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTB---------
T ss_pred             cCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCC---------
Confidence             599999999975431    233456889999999997777766    35567899999997765443321         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCc------chH-HH-HHHHHcCCCC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLN------ASC-AV-LQQLLQGSKD  219 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~------~~~-~~-~~~~~~~~~~  219 (307)
                                 ..|+.+|...+.+.+.++.+.   |+++++++||.|+++.......      ... .. ........  
T Consensus       155 -----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  221 (260)
T 2z1n_A          155 -----------ALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRI--  221 (260)
T ss_dssp             -----------HHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CC--
T ss_pred             -----------chhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcC--
Confidence                       569999999998888777664   8999999999999987541100      000 00 11111111  


Q ss_pred             CCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCC
Q 021819          220 TQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNG  256 (307)
Q Consensus       220 ~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~  256 (307)
                          ....+.+++|+|+++++++..+  ...|..+..++
T Consensus       222 ----p~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdG  256 (260)
T 2z1n_A          222 ----PMGRVGKPEELASVVAFLASEKASFITGAVIPVDG  256 (260)
T ss_dssp             ----TTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             ----CCCCccCHHHHHHHHHHHhCccccCCCCCEEEeCC
Confidence                1235789999999999998653  34565544433

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.95  E-value=1.1e-26  Score=197.23  Aligned_cols=225  Identities=19%  Similarity=0.171  Sum_probs=158.9

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ++++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+....  . .++.++++|++|+++++++++      
T Consensus        26 ~l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (277)
T 3gvc_A           26 DLAGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKI--G-CGAAACRVDVSDEQQIIAMVDACVAAF  101 (277)
T ss_dssp             -CTTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHH--C-SSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc--C-CcceEEEecCCCHHHHHHHHHHHHHHc
Confidence            35678999999999999999999999999 9999999765543332211  1 167899999999999888776      


Q ss_pred             -CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 -GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                       ++|++|||||....    +...+++.+.+++|+.++.++++++..    .+.++||++||..+..+.+..         
T Consensus       102 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~---------  172 (277)
T 3gvc_A          102 GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGT---------  172 (277)
T ss_dssp             SSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTB---------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCc---------
Confidence             68999999998654    223345688999999999999998743    556799999998775544332         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCC-CCCccc
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEYHWL  226 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  226 (307)
                                 ..|+.+|...+.+.+.++.+   .|+++++++||.|+++.............   ....... ......
T Consensus       173 -----------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~~  238 (277)
T 3gvc_A          173 -----------GAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGAL---GAGGARSMIARLQG  238 (277)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC---------CCHHHHHHHHHS
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhH---HHHhhhhhhhcccc
Confidence                       57999999999999887766   58999999999998874211000000000   0000000 000123


Q ss_pred             CcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          227 GAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                      .+.+++|+|+++++++...  ...|..+..+++
T Consensus       239 r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG  271 (277)
T 3gvc_A          239 RMAAPEEMAGIVVFLLSDDASMITGTTQIADGG  271 (277)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCHHHHHHHHHHHcCCccCCccCcEEEECCc
Confidence            5789999999999998643  345764444433

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.95  E-value=4.9e-27  Score=197.69  Aligned_cols=223  Identities=17%  Similarity=0.123  Sum_probs=152.4

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeC-CCCCCcccc-cCCCCCCCceEEEEcccCChhHHHHHhc--
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r-~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~--   79 (307)
                      |+.+++|+++||||+|+||+++++.|+++|+ +|++..+ +....+... .+.... .++.++++|++|+++++++++  
T Consensus         3 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~   80 (259)
T 3edm_A            3 LQRFTNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLG-RSALAIKADLTNAAEVEAAISAA   80 (259)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTT-SCCEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHH
Confidence            4556789999999999999999999999999 8888744 333222221 111112 268899999999999888876  


Q ss_pred             -----CccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHHHhcC--CcEEEEecCccee-ccCCCCCCccc
Q 021819           80 -----GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKRFG--VRRVVVTSSISAI-VPNPGWKGKVF  146 (307)
Q Consensus        80 -----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~iSS~~~~-~~~~~~~~~~~  146 (307)
                           ++|++|||||....     ....+.+.+.+++|+.++.++++++...-  .++||++||..+. .+.+..     
T Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~-----  155 (259)
T 3edm_A           81 ADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPGA-----  155 (259)
T ss_dssp             HHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCSTTC-----
T ss_pred             HHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCCCc-----
Confidence                 68999999987522     22233458899999999999999997763  2489999997764 222221     


Q ss_pred             ccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc--CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCc
Q 021819          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (307)
                                     ..|+.+|...+.+.+.++.+.  ++++++++||.|.++.......  ..........      ..
T Consensus       156 ---------------~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~------~p  212 (259)
T 3edm_A          156 ---------------LAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTK--PEVRERVAGA------TS  212 (259)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC----------------------------
T ss_pred             ---------------HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccC--hHHHHHHHhc------CC
Confidence                           569999999999999888775  3999999999998876433210  1111111111      12


Q ss_pred             ccCcccHHHHHHHHHHhhcCCC--CCceE-EecCC
Q 021819          225 WLGAVPVKDVAKAQVLLFESPA--ASGRY-LCTNG  256 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~~--~~g~~-~~~~~  256 (307)
                      ...+.+++|+|+++++++....  ..|.+ ++.|+
T Consensus       213 ~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGg  247 (259)
T 3edm_A          213 LKREGSSEDVAGLVAFLASDDAAYVTGACYDINGG  247 (259)
T ss_dssp             --CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESBC
T ss_pred             CCCCcCHHHHHHHHHHHcCccccCccCCEEEECCC
Confidence            3457799999999999886543  34654 45444

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.95  E-value=2.4e-27  Score=197.99  Aligned_cols=217  Identities=18%  Similarity=0.185  Sum_probs=154.9

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEE-eCCCCCCccccc-CCCCCCCceEE-EEcccCChhHHHHHhc------
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDSSHLFA-LPGAGDANLRV-FEADVLDSGAVSRAVE------   79 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~~~-~~~~~~~~~~~-i~~D~~d~~~~~~~~~------   79 (307)
                      ||+|+||||+|+||++++++|+++|+ +|+++ +|+.+..+.+.. +..... ++.. +.+|++|.++++++++      
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGF-ALAIHYGQNREKAEEVAEEARRRGS-PLVAVLGANLLEAEAATALVHQAAEVL   78 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESSCHHHHHHHHHHHHHTTC-SCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCC-ceEEEEeccCCCHHHHHHHHHHHHHhc
Confidence            46899999999999999999999999 88887 676544332211 111111 4566 8999999999888764      


Q ss_pred             -CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 -GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                       ++|+|||+||....    ....+++.+.+++|+.++.++++++    ++.+.++||++||..+.++.+..         
T Consensus        79 ~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~---------  149 (245)
T 2ph3_A           79 GGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQ---------  149 (245)
T ss_dssp             TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSB---------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCC---------
Confidence             78999999997643    1223456789999999966665554    55677899999998766554332         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                                 ..|+.+|...+.+.+.++++.   +++++++|||.++++.....   ............+      ...
T Consensus       150 -----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~------~~~  209 (245)
T 2ph3_A          150 -----------ANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERL---PQEVKEAYLKQIP------AGR  209 (245)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---CHHHHHHHHHTCT------TCS
T ss_pred             -----------cchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhc---CHHHHHHHHhcCC------CCC
Confidence                       579999999999988887664   89999999999998754322   1222223333222      345


Q ss_pred             cccHHHHHHHHHHhhcCCC--CCce-EEecCC
Q 021819          228 AVPVKDVAKAQVLLFESPA--ASGR-YLCTNG  256 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~~--~~g~-~~~~~~  256 (307)
                      +++++|+|+++++++..+.  ..|. +++.++
T Consensus       210 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  241 (245)
T 2ph3_A          210 FGRPEEVAEAVAFLVSEKAGYITGQTLCVDGG  241 (245)
T ss_dssp             CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence            7899999999999987542  3354 555544

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.95  E-value=1.1e-26  Score=196.49  Aligned_cols=218  Identities=19%  Similarity=0.175  Sum_probs=159.6

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeC-CCCCCccc-ccCCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r-~~~~~~~~-~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      ++.+|+++||||+|+||++++++|+++|+ +|++..+ +....+.. ..+..... ++.++.+|++|+++++++++    
T Consensus        23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~  100 (267)
T 4iiu_A           23 NAMSRSVLVTGASKGIGRAIARQLAADGF-NIGVHYHRDAAGAQETLNAIVANGG-NGRLLSFDVANREQCREVLEHEIA  100 (267)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHH
Confidence            44568999999999999999999999999 7766554 33222221 11111112 78999999999999888876    


Q ss_pred             ---CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHH-----hcCCcEEEEecCcceeccCCCCCCcccc
Q 021819           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK-----RFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                         .+|+||||||.....    ...+++...+++|+.++.++++++.     +.+.++||++||..+..+.+..      
T Consensus       101 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------  174 (267)
T 4iiu_A          101 QHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQ------  174 (267)
T ss_dssp             HHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTC------
T ss_pred             HhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCC------
Confidence               789999999986542    2334568899999999999999873     4556899999998876665443      


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCc
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (307)
                                    ..|+.+|.+.+.+.+.++.+.   ++++++++||.|.++.....    ...........+      
T Consensus       175 --------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~p------  230 (267)
T 4iiu_A          175 --------------VNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME----ESALKEAMSMIP------  230 (267)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC----HHHHHHHHHTCT------
T ss_pred             --------------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc----HHHHHHHHhcCC------
Confidence                          579999998888888777664   89999999999999875433    333344443332      


Q ss_pred             ccCcccHHHHHHHHHHhhcCC--CCCceEEecC
Q 021819          225 WLGAVPVKDVAKAQVLLFESP--AASGRYLCTN  255 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~  255 (307)
                      ...+.+++|+|+++++++...  ...|..+..+
T Consensus       231 ~~~~~~~edva~~~~~L~s~~~~~itG~~i~vd  263 (267)
T 4iiu_A          231 MKRMGQAEEVAGLASYLMSDIAGYVTRQVISIN  263 (267)
T ss_dssp             TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             CCCCcCHHHHHHHHHHHhCCcccCccCCEEEeC
Confidence            345789999999999988753  3456544333

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.95  E-value=3e-27  Score=197.24  Aligned_cols=216  Identities=17%  Similarity=0.146  Sum_probs=156.5

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEE-eCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +|+|+||||+|+||++++++|+++|+ +|+++ .|+....+.+.. +..... ++.++.+|++|+++++++++       
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGG-QAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTC-EEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            36899999999999999999999999 88884 676443322211 100011 68889999999999988876       


Q ss_pred             CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                      ++|+|||+||.....    ...+.+.+.+++|+.++.++++++.+    .+.++||++||..+.++.+..          
T Consensus        79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~----------  148 (244)
T 1edo_A           79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQ----------  148 (244)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC----------
T ss_pred             CCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCC----------
Confidence            689999999976532    22345678899999999999998865    366899999998776654332          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (307)
                                ..|+.+|...+.+.+.++++   .+++++++|||.++++.....   ............+      ...+
T Consensus       149 ----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~------~~~~  209 (244)
T 1edo_A          149 ----------ANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL---GEDMEKKILGTIP------LGRT  209 (244)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT---CHHHHHHHHTSCT------TCSC
T ss_pred             ----------ccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhc---ChHHHHHHhhcCC------CCCC
Confidence                      56999999999888877765   489999999999998754322   1222223222221      2457


Q ss_pred             ccHHHHHHHHHHhhcCCC---CCce-EEecC
Q 021819          229 VPVKDVAKAQVLLFESPA---ASGR-YLCTN  255 (307)
Q Consensus       229 i~~~dva~~~~~~~~~~~---~~g~-~~~~~  255 (307)
                      ++++|+|+++++++.++.   ..|. +++.+
T Consensus       210 ~~~~dva~~~~~l~~~~~~~~~~G~~~~v~g  240 (244)
T 1edo_A          210 GQPENVAGLVEFLALSPAASYITGQAFTIDG  240 (244)
T ss_dssp             BCHHHHHHHHHHHHHCSGGGGCCSCEEEEST
T ss_pred             CCHHHHHHHHHHHhCCCccCCcCCCEEEeCC
Confidence            899999999999985543   2354 44443

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.95  E-value=5.5e-27  Score=198.87  Aligned_cols=220  Identities=17%  Similarity=0.159  Sum_probs=151.0

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEE-eCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      ++|+++||||+|+||++++++|+++|+ +|++. .|+.+..+.+.........++.++.+|++|.++++++++       
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  103 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGW-RVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG  103 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            467999999999999999999999999 77666 554433332221111111278899999999999888776       


Q ss_pred             CccEEEEeccCCCCC-----CCCChhhhhhhhhHHHHHHHHHHHHhc-------CCcEEEEecCcceeccCCCCCCcccc
Q 021819           80 GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAKRF-------GVRRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~-------~~~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                      ++|+||||||.....     ...+.+.+.+++|+.++.++++++...       +.++||++||..+..+.+..      
T Consensus       104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------  177 (272)
T 4e3z_A          104 RLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQ------  177 (272)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTT------
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCC------
Confidence            679999999976531     133456889999999999999988543       35689999998776654321      


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCc
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (307)
                                   ...|+.+|.+.+.+.+.++.+.   |+++++++||.|.++.....  .............      .
T Consensus       178 -------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~------~  236 (272)
T 4e3z_A          178 -------------YVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASG--GLPDRAREMAPSV------P  236 (272)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC--------------------CC------T
T ss_pred             -------------cchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCccccc--CChHHHHHHhhcC------C
Confidence                         1469999999999998887764   89999999999999864331  1111111211111      2


Q ss_pred             ccCcccHHHHHHHHHHhhcCCC--CCce-EEecC
Q 021819          225 WLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~~--~~g~-~~~~~  255 (307)
                      ...+.+++|+|+++++++....  ..|. +++.+
T Consensus       237 ~~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdg  270 (272)
T 4e3z_A          237 MQRAGMPEEVADAILYLLSPSASYVTGSILNVSG  270 (272)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cCCCcCHHHHHHHHHHHhCCccccccCCEEeecC
Confidence            3456789999999999986432  3465 45543

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.95  E-value=3.8e-26  Score=195.10  Aligned_cols=227  Identities=19%  Similarity=0.142  Sum_probs=161.2

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC-------------cccc---c-CCCCCCCceEEEEccc
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-------------SHLF---A-LPGAGDANLRVFEADV   68 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-------------~~~~---~-~~~~~~~~~~~i~~D~   68 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++++|+.+..             +.+.   . +.... .++.++++|+
T Consensus         8 ~l~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv   85 (286)
T 3uve_A            8 RVEGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN-RRIVTAEVDV   85 (286)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT-CCEEEEECCT
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC-CceEEEEcCC
Confidence            46789999999999999999999999999 899998863221             1111   1 11112 2788999999


Q ss_pred             CChhHHHHHhc-------CccEEEEeccCCCCCC-----CCChhhhhhhhhHHHHHHHHHHHHhc----C-CcEEEEecC
Q 021819           69 LDSGAVSRAVE-------GCKGVFHVASPCTLED-----PVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSS  131 (307)
Q Consensus        69 ~d~~~~~~~~~-------~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~iSS  131 (307)
                      +|+++++++++       ++|++|||||......     ..+++.+.+++|+.++.++++++...    + .++||++||
T Consensus        86 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS  165 (286)
T 3uve_A           86 RDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSS  165 (286)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECc
Confidence            99999988876       6899999999765422     33456889999999999999987442    3 468999999


Q ss_pred             cceeccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCC-----
Q 021819          132 ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL-----  203 (307)
Q Consensus       132 ~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~-----  203 (307)
                      ..+..+.+..                    ..|+.+|...+.+.+.++.+   .|+++++|+||.|.++......     
T Consensus       166 ~~~~~~~~~~--------------------~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~  225 (286)
T 3uve_A          166 VGGLKAYPHT--------------------GHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMF  225 (286)
T ss_dssp             GGGTSCCTTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHH
T ss_pred             hhhccCCCCc--------------------cHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhc
Confidence            8776554442                    56999999999998888776   5899999999999998754310     


Q ss_pred             -----cchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCcc
Q 021819          204 -----NASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIY  258 (307)
Q Consensus       204 -----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~  258 (307)
                           .............    .......+.+++|+|+++++++...  ...|..+..+++.
T Consensus       226 ~~~~~~~~~~~~~~~~~~----~~~~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~  283 (286)
T 3uve_A          226 RPDLENPGPDDMAPICQM----FHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGS  283 (286)
T ss_dssp             CTTSSSCCHHHHHHHHHT----TCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cccccccchhhHHHHHHh----hhccCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcc
Confidence                 0000000010000    0011256789999999999988643  3457655444443

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.95  E-value=5.6e-27  Score=197.98  Aligned_cols=223  Identities=16%  Similarity=0.214  Sum_probs=156.3

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC-CcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ..||+++||||+|+||+++++.|+++|+ +|++++|+... .+.+.........++.++++|++|++++.++++      
T Consensus         5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   83 (264)
T 3i4f_A            5 RFVRHALITAGTKGLGKQVTEKLLAKGY-SVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHF   83 (264)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cccCEEEEeCCCchhHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            3478999999999999999999999999 88888775433 222222111111278999999999999888876      


Q ss_pred             -CccEEEEeccCCCC------CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 -GCKGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 -~~d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                       ++|+||||||....      +...+.+.+.+++|+.++.++++++    ++.+.++||++||.+.... .+.       
T Consensus        84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-~~~-------  155 (264)
T 3i4f_A           84 GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSA-PGW-------  155 (264)
T ss_dssp             SCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGC-CCC-------
T ss_pred             CCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhccc-CCC-------
Confidence             78999999994221      1223456789999999999999998    5666789999998643211 110       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                           +     ....|+.+|...+.+.+.++.+   .|+++++++||.|+++.....   ............      ..
T Consensus       156 -----~-----~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~------p~  216 (264)
T 3i4f_A          156 -----I-----YRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT---IQEARQLKEHNT------PI  216 (264)
T ss_dssp             -----T-----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC---HHHHHHC-------------
T ss_pred             -----C-----CCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc---cHHHHHHHhhcC------CC
Confidence                 0     1157999999999999888776   589999999999999875443   122211111111      23


Q ss_pred             cCcccHHHHHHHHHHhhcCCC--CCceEEecCCc
Q 021819          226 LGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGI  257 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~~--~~g~~~~~~~~  257 (307)
                      ..+.+++|+|+++++++....  ..|..+..+++
T Consensus       217 ~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG  250 (264)
T 3i4f_A          217 GRSGTGEDIARTISFLCEDDSDMITGTIIEVTGA  250 (264)
T ss_dssp             -CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESCS
T ss_pred             CCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcCc
Confidence            457899999999999997543  44765444443

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.95  E-value=8.1e-27  Score=199.73  Aligned_cols=225  Identities=12%  Similarity=0.060  Sum_probs=161.7

Q ss_pred             cccCCcEEEEeCCchh--hHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc---
Q 021819            5 AEKEEETVCVTGANGF--IGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (307)
Q Consensus         5 ~~~~~~~ilItGatG~--iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~---   79 (307)
                      ..+++|+++||||+|+  ||+++++.|+++|+ +|++.+|+....+.+..+..... ++.++.+|++|+++++++++   
T Consensus        27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~  104 (293)
T 3grk_A           27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELG-AFVAGHCDVADAASIDAVFETLE  104 (293)
T ss_dssp             CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHT-CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC-CceEEECCCCCHHHHHHHHHHHH
Confidence            3467899999999977  99999999999999 89999887432222222211111 57899999999999888876   


Q ss_pred             ----CccEEEEeccCCCC--------CCCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcc
Q 021819           80 ----GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKV  145 (307)
Q Consensus        80 ----~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~  145 (307)
                          ++|++|||||....        ....+.+...+++|+.++.++++++...  ..++||++||..+..+.+..    
T Consensus       105 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~----  180 (293)
T 3grk_A          105 KKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNY----  180 (293)
T ss_dssp             HHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTTT----
T ss_pred             HhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCch----
Confidence                68999999998641        2334456889999999999999999764  24689999998775554432    


Q ss_pred             cccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCC
Q 021819          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (307)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (307)
                                      ..|+.+|...+.+.+.++.+   .|+++++|+||.|.++....... ............+    
T Consensus       181 ----------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p----  239 (293)
T 3grk_A          181 ----------------NVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGD-FRYILKWNEYNAP----  239 (293)
T ss_dssp             ----------------THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CC-HHHHHHHHHHHST----
T ss_pred             ----------------HHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccc-hHHHHHHHHhcCC----
Confidence                            57999999999999888766   48999999999999986544321 1222333322222    


Q ss_pred             CcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCcc
Q 021819          223 YHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIY  258 (307)
Q Consensus       223 ~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~  258 (307)
                        ...+.+++|+|+++++++...  ...|..+..++++
T Consensus       240 --~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  275 (293)
T 3grk_A          240 --LRRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSGY  275 (293)
T ss_dssp             --TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             --CCCCCCHHHHHHHHHHHcCccccCCcceEEEECCCc
Confidence              345679999999999988753  3457655544443

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.95  E-value=1e-26  Score=198.15  Aligned_cols=223  Identities=17%  Similarity=0.143  Sum_probs=164.8

Q ss_pred             cccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc---
Q 021819            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (307)
Q Consensus         3 ~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~---   79 (307)
                      .|+.+++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+....  . .++.++++|++|.++++++++   
T Consensus        24 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~--~-~~~~~~~~Dl~~~~~v~~~~~~~~   99 (281)
T 3ppi_A           24 TIKQFEGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADEL--G-NRAEFVSTNVTSEDSVLAAIEAAN   99 (281)
T ss_dssp             CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH--C-TTEEEEECCTTCHHHHHHHHHHHT
T ss_pred             hhhccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHh--C-CceEEEEcCCCCHHHHHHHHHHHH
Confidence            35567789999999999999999999999999 8999999765544332211  1 168999999999999988876   


Q ss_pred             ---CccEEEEecc-CCCCC---------CCCChhhhhhhhhHHHHHHHHHHHHh----------cCCcEEEEecCcceec
Q 021819           80 ---GCKGVFHVAS-PCTLE---------DPVDPEKELILPAVQGTLNVLEAAKR----------FGVRRVVVTSSISAIV  136 (307)
Q Consensus        80 ---~~d~vi~~a~-~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~----------~~~~~~v~iSS~~~~~  136 (307)
                         ++|++|||++ .....         ...+.+.+.+++|+.++.++++++..          .+.++||++||..+..
T Consensus       100 ~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  179 (281)
T 3ppi_A          100 QLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE  179 (281)
T ss_dssp             TSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTS
T ss_pred             HhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccC
Confidence               5799999944 33221         11223689999999999999998852          2346899999987765


Q ss_pred             cCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHH
Q 021819          137 PNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQL  213 (307)
Q Consensus       137 ~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~  213 (307)
                      +.+..                    ..|+.+|.+.+.+.+.++.+.   |+++++++||.|.++.....   ........
T Consensus       180 ~~~~~--------------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~  236 (281)
T 3ppi_A          180 GQIGQ--------------------TAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV---GEEALAKF  236 (281)
T ss_dssp             CCTTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTT---CHHHHHHH
T ss_pred             CCCCC--------------------cccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcc---cHHHHHHH
Confidence            54332                    579999999999888877664   89999999999987654322   12233333


Q ss_pred             HcCCCCCCCCcccCcccHHHHHHHHHHhhcCCCCCceEEecCCc
Q 021819          214 LQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGI  257 (307)
Q Consensus       214 ~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~~~g~~~~~~~~  257 (307)
                      ....+.     ...+.+++|+|+++++++.++...|..+..+++
T Consensus       237 ~~~~~~-----~~~~~~pedvA~~v~~l~s~~~~tG~~i~vdGG  275 (281)
T 3ppi_A          237 AANIPF-----PKRLGTPDEFADAAAFLLTNGYINGEVMRLDGA  275 (281)
T ss_dssp             HHTCCS-----SSSCBCHHHHHHHHHHHHHCSSCCSCEEEESTT
T ss_pred             HhcCCC-----CCCCCCHHHHHHHHHHHHcCCCcCCcEEEECCC
Confidence            333221     256789999999999999887777875544443

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.95  E-value=3.4e-26  Score=190.95  Aligned_cols=215  Identities=19%  Similarity=0.160  Sum_probs=158.0

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+....     ++.++.+|++|+++++++++       
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~g   76 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAV-----GAHPVVMDVADPASVERGFAEALAHLG   76 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc-----CCEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3568999999999999999999999999 8999999765443332211     36788999999999888776       


Q ss_pred             CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                      ++|+||||||.....    ...+++++.+++|+.++.++++++.+    .+.++||++||.. .++.+..          
T Consensus        77 ~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~----------  145 (245)
T 1uls_A           77 RLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQ----------  145 (245)
T ss_dssp             SCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTC----------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCc----------
Confidence            489999999976432    22345678999999999999888854    3568999999977 5554332          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (307)
                                ..|+.+|...+.+.+.++.+   .|+++++++||.|.++......   ...........+      ...+
T Consensus       146 ----------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~p------~~~~  206 (245)
T 1uls_A          146 ----------ANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVP---EKVREKAIAATP------LGRA  206 (245)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSC---HHHHHHHHHTCT------TCSC
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcC---HHHHHHHHhhCC------CCCC
Confidence                      46999999888888877655   4899999999999888654321   122222222221      2347


Q ss_pred             ccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          229 VPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       229 i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                      ++++|+|+++++++..+  ...|..+..+++
T Consensus       207 ~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  237 (245)
T 1uls_A          207 GKPLEVAYAALFLLSDESSFITGQVLFVDGG  237 (245)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhCchhcCCcCCEEEECCC
Confidence            89999999999998753  345665444443

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.95  E-value=4.5e-27  Score=200.13  Aligned_cols=221  Identities=15%  Similarity=0.116  Sum_probs=156.3

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcC-----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG-----   80 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-----   80 (307)
                      .+++|+++||||+|+||++++++|+++|+ +|++++|+....+.+.........++.++.+|++|.+++.++++.     
T Consensus        31 ~l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  109 (279)
T 3ctm_A           31 SLKGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDF  109 (279)
T ss_dssp             CCTTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            45678999999999999999999999999 899999976554333221100011688999999999998888764     


Q ss_pred             --ccEEEEeccCCCC-C-----CCCChhhhhhhhhHHH----HHHHHHHHHhcCCcEEEEecCcceeccCCCCCCccccc
Q 021819           81 --CKGVFHVASPCTL-E-----DPVDPEKELILPAVQG----TLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        81 --~d~vi~~a~~~~~-~-----~~~~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                        +|+|||+||.... .     ...+.+.+.+++|+.+    ++++++.+++.+.++||++||..+..+...        
T Consensus       110 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------  181 (279)
T 3ctm_A          110 GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIP--------  181 (279)
T ss_dssp             SCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC-----------
T ss_pred             CCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCC--------
Confidence              8999999997644 1     1123457789999999    456666677777789999999765433100        


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                          .+      ...|+.+|...+.+.+.++.+.   + ++++++||.+.++......   ...........+      .
T Consensus       182 ----~~------~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~p------~  241 (279)
T 3ctm_A          182 ----QL------QAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFAS---KDMKAKWWQLTP------L  241 (279)
T ss_dssp             ----CC------HHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCC---HHHHHHHHHHST------T
T ss_pred             ----CC------cccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccC---hHHHHHHHHhCC------c
Confidence                01      1569999999999999888774   6 9999999999988653221   122222222111      2


Q ss_pred             cCcccHHHHHHHHHHhhcCC--CCCceE-EecC
Q 021819          226 LGAVPVKDVAKAQVLLFESP--AASGRY-LCTN  255 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~--~~~g~~-~~~~  255 (307)
                      ..+++++|+|+++++++..+  ...|.. ++.+
T Consensus       242 ~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdg  274 (279)
T 3ctm_A          242 GREGLTQELVGGYLYLASNASTFTTGSDVVIDG  274 (279)
T ss_dssp             CSCBCGGGTHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cCCcCHHHHHHHHHHHhCccccCccCCEEEECC
Confidence            35789999999999998753  344654 4443

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.95  E-value=1.5e-26  Score=190.16  Aligned_cols=191  Identities=16%  Similarity=0.108  Sum_probs=140.7

Q ss_pred             CcEEEEeCCchhhHHHHHHHHH-HCCCCeEEEEeCCCC-CCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLL-DNNYTSINATVFPGS-DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~-~~g~~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      ||+|+||||||+||+++++.|+ ++|+ +|++++|++. ..+.+...   . .++.++.+|++|++++.++++++|+|||
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~d~~~~~~~~~~~d~vv~   79 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKTRIPPEIID---H-ERVTVIEGSFQNPGXLEQAVTNAEVVFV   79 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHHHSCHHHHT---S-TTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccccchhhccC---C-CceEEEECCCCCHHHHHHHHcCCCEEEE
Confidence            4579999999999999999999 8999 9999999866 44433211   1 1789999999999999999999999999


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHH
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (307)
                      +||..               |+. ++++++++++.++++||++||..++...+.    ...+      .+.......|+.
T Consensus        80 ~ag~~---------------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~----~~~~------~~~~~~~~~y~~  133 (221)
T 3r6d_A           80 GAMES---------------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPV----ALEK------WTFDNLPISYVQ  133 (221)
T ss_dssp             SCCCC---------------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCH----HHHH------HHHHTSCHHHHH
T ss_pred             cCCCC---------------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCc----cccc------ccccccccHHHH
Confidence            99852               444 999999999999999999999665332111    0000      011111127999


Q ss_pred             HHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhh--cC
Q 021819          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLF--ES  244 (307)
Q Consensus       167 sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~--~~  244 (307)
                      +|...|.+++    ..+++++++|||.++++.........       ..+.     .....+++++|+|+++++++  .+
T Consensus       134 ~K~~~e~~~~----~~~i~~~~vrpg~v~~~~~~~~~~~~-------~~~~-----~~~~~~~~~~dvA~~~~~l~~~~~  197 (221)
T 3r6d_A          134 GERQARNVLR----ESNLNYTILRLTWLYNDPEXTDYELI-------PEGA-----QFNDAQVSREAVVKAIFDILHAAD  197 (221)
T ss_dssp             HHHHHHHHHH----HSCSEEEEEEECEEECCTTCCCCEEE-------CTTS-----CCCCCEEEHHHHHHHHHHHHTCSC
T ss_pred             HHHHHHHHHH----hCCCCEEEEechhhcCCCCCcceeec-------cCCc-----cCCCceeeHHHHHHHHHHHHHhcC
Confidence            9999998886    57999999999999998332211000       0000     01234799999999999999  76


Q ss_pred             CC
Q 021819          245 PA  246 (307)
Q Consensus       245 ~~  246 (307)
                      +.
T Consensus       198 ~~  199 (221)
T 3r6d_A          198 ET  199 (221)
T ss_dssp             CG
T ss_pred             hh
Confidence            65

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.95  E-value=5.8e-27  Score=198.09  Aligned_cols=225  Identities=17%  Similarity=0.152  Sum_probs=159.7

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCC-CCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP-GAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++++|+....+.+.... .....++.++.+|++|+++++++++     
T Consensus        18 ~l~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (267)
T 1vl8_A           18 DLRGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   96 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35678999999999999999999999999 8999999754433221100 0001167889999999999888776     


Q ss_pred             --CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcc-eeccCCCCCCccccc
Q 021819           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSIS-AIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~-~~~~~~~~~~~~~~E  148 (307)
                        ++|+||||||.....    ...+++.+.+++|+.++.++++++.    +.+.++||++||.. +..+.+.        
T Consensus        97 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~--------  168 (267)
T 1vl8_A           97 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPN--------  168 (267)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSS--------
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCC--------
Confidence              689999999976532    1234567899999999999988873    45668999999976 4332222        


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                                  ...|+.+|...+.+.+.++.+   .|+++++++||.|.++....... ............+      .
T Consensus       169 ------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p------~  229 (267)
T 1vl8_A          169 ------------ISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFS-DPEKLDYMLKRIP------L  229 (267)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHT-CHHHHHHHHHTCT------T
T ss_pred             ------------ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccccccc-ChHHHHHHHhhCC------C
Confidence                        157999999999999888766   48999999999998875321100 0122222222222      2


Q ss_pred             cCcccHHHHHHHHHHhhcCC--CCCceEEecCCcc
Q 021819          226 LGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIY  258 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~  258 (307)
                      ..+++++|+|+++++++...  ...|..+..++++
T Consensus       230 ~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~  264 (267)
T 1vl8_A          230 GRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGW  264 (267)
T ss_dssp             SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCcCHHHHHHHHHHHcCccccCCcCCeEEECCCC
Confidence            35789999999999988653  3457655444443

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.95  E-value=1.5e-27  Score=202.42  Aligned_cols=225  Identities=15%  Similarity=0.069  Sum_probs=161.0

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++.+|+.+..+.+.........++..+.+|++|.+++.++++      
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g  108 (275)
T 4imr_A           30 GLRGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIA  108 (275)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            46789999999999999999999999999 89999998766544332111111278899999999998888776      


Q ss_pred             CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                      ++|++|||||.....    ...+++...+++|+.++.++++++    ++.+.++||++||..+..+....          
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~----------  178 (275)
T 4imr_A          109 PVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVV----------  178 (275)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTB----------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCc----------
Confidence            689999999975432    233456889999999999999988    34566799999997765432221          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (307)
                                ..|+.+|...+.+.+.++.+.   |+++++++||.|.++.....................     ....+
T Consensus       179 ----------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-----p~~r~  243 (275)
T 4imr_A          179 ----------TAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLN-----WMGRA  243 (275)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHS-----TTCSC
T ss_pred             ----------hhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcC-----ccCCC
Confidence                      459999999999998887764   899999999999886422110001111122111110     12346


Q ss_pred             ccHHHHHHHHHHhhcCC--CCCceEEecCC
Q 021819          229 VPVKDVAKAQVLLFESP--AASGRYLCTNG  256 (307)
Q Consensus       229 i~~~dva~~~~~~~~~~--~~~g~~~~~~~  256 (307)
                      .+++|+|+++++++...  ...|..+..++
T Consensus       244 ~~pedvA~~v~fL~s~~a~~itG~~i~vdG  273 (275)
T 4imr_A          244 GRPEEMVGAALFLASEACSFMTGETIFLTG  273 (275)
T ss_dssp             BCGGGGHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             cCHHHHHHHHHHHcCcccCCCCCCEEEeCC
Confidence            78999999999988653  34576544433

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.95  E-value=3.8e-27  Score=191.02  Aligned_cols=186  Identities=13%  Similarity=0.115  Sum_probs=144.1

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcC---ccEEEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG---CKGVFH   86 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~---~d~vi~   86 (307)
                      |+++||||+|+||++++++|+ +|+ +|++++|+..                 .+.+|++|++++++++++   +|+|||
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~g~-~V~~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~~~~d~vi~   64 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-KKA-EVITAGRHSG-----------------DVTVDITNIDSIKKMYEQVGKVDAIVS   64 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-TTS-EEEEEESSSS-----------------SEECCTTCHHHHHHHHHHHCCEEEEEE
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-CCC-eEEEEecCcc-----------------ceeeecCCHHHHHHHHHHhCCCCEEEE
Confidence            479999999999999999999 999 9999998643                 356999999999988875   899999


Q ss_pred             eccCCCCCC----CCChhhhhhhhhHHHHHHHHHHHHhc---CCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcc
Q 021819           87 VASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKS  159 (307)
Q Consensus        87 ~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~  159 (307)
                      +||......    ..+.+.+.+++|+.++.++++++.+.   + ++||++||..+..+.+..                  
T Consensus        65 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~~------------------  125 (202)
T 3d7l_A           65 ATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMMEDPIVQG------------------  125 (202)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGTSCCTTC------------------
T ss_pred             CCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhcCCCCcc------------------
Confidence            999754321    22345678899999999999999876   4 689999997654332221                  


Q ss_pred             cCccHHHHHHHHHHHHHHHHHhc--CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHH
Q 021819          160 RKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKA  237 (307)
Q Consensus       160 ~~~~y~~sK~~~e~~~~~~~~~~--~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~  237 (307)
                        ..|+.+|...|.+.+.++.+.  +++++++||+.++++...            ....      ...+++++++|+|++
T Consensus       126 --~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~------------~~~~------~~~~~~~~~~dva~~  185 (202)
T 3d7l_A          126 --ASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWDK------------LEPF------FEGFLPVPAAKVARA  185 (202)
T ss_dssp             --HHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHHH------------HGGG------STTCCCBCHHHHHHH
T ss_pred             --HHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchhh------------hhhh------ccccCCCCHHHHHHH
Confidence              579999999999999887653  899999999999987421            0111      124678999999999


Q ss_pred             HHHhhcCCCCCceEEe
Q 021819          238 QVLLFESPAASGRYLC  253 (307)
Q Consensus       238 ~~~~~~~~~~~g~~~~  253 (307)
                      ++.++.....+..|++
T Consensus       186 ~~~~~~~~~~G~~~~v  201 (202)
T 3d7l_A          186 FEKSVFGAQTGESYQV  201 (202)
T ss_dssp             HHHHHHSCCCSCEEEE
T ss_pred             HHHhhhccccCceEec
Confidence            9988854333334554

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.95  E-value=1.9e-27  Score=206.29  Aligned_cols=222  Identities=13%  Similarity=0.109  Sum_probs=159.4

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCC-CCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS-DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      |++|+||||||+||++|++.|+++|+ +|++++|+++ ..+.+..+..   .+++++.+|++|++++.++++++|+|||+
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~l~~---~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~   86 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGH-PTYVFTRPNSSKTTLLDEFQS---LGAIIVKGELDEHEKLVELMKKVDVVISA   86 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTC-CEEEEECTTCSCHHHHHHHHH---TTCEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCC-cEEEEECCCCchhhHHHHhhc---CCCEEEEecCCCHHHHHHHHcCCCEEEEC
Confidence            35899999999999999999999998 8999999765 2222211110   16889999999999999999999999999


Q ss_pred             ccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcC-CcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHH
Q 021819           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (307)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (307)
                      ++...               +.++.+++++|++.+ +++||+ |+.+.   .       .+|..+..|..     ..| .
T Consensus        87 a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~~g~---~-------~~~~~~~~p~~-----~~y-~  134 (318)
T 2r6j_A           87 LAFPQ---------------ILDQFKILEAIKVAGNIKRFLP-SDFGV---E-------EDRINALPPFE-----ALI-E  134 (318)
T ss_dssp             CCGGG---------------STTHHHHHHHHHHHCCCCEEEC-SCCSS---C-------TTTCCCCHHHH-----HHH-H
T ss_pred             Cchhh---------------hHHHHHHHHHHHhcCCCCEEEe-ecccc---C-------cccccCCCCcc-----hhH-H
Confidence            98531               446789999999998 999985 53211   1       12222222211     468 9


Q ss_pred             HHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCC---CCCcccCcccHHHHHHHHHHhhc
Q 021819          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT---QEYHWLGAVPVKDVAKAQVLLFE  243 (307)
Q Consensus       167 sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~dva~~~~~~~~  243 (307)
                      +|..+|++++    +.+++++++||+.+++..       ...+......+....   .++..+++++++|+|++++.++.
T Consensus       135 sK~~~e~~~~----~~~~~~~~lr~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~  203 (318)
T 2r6j_A          135 RKRMIRRAIE----EANIPYTYVSANCFASYF-------INYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVAT  203 (318)
T ss_dssp             HHHHHHHHHH----HTTCCBEEEECCEEHHHH-------HHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHH----hcCCCeEEEEcceehhhh-------hhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhc
Confidence            9999998886    569999999999876531       111111111122211   13467899999999999999998


Q ss_pred             CCCCCc-eEEec--CCcccHHHHHHHHHHhCCCCCCCc
Q 021819          244 SPAASG-RYLCT--NGIYQFGDFAERVSKLFPEFPVHR  278 (307)
Q Consensus       244 ~~~~~g-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  278 (307)
                      ++...+ .+++.  ++.+++.|+++.+.+.+ +.+++.
T Consensus       204 ~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~-g~~~~~  240 (318)
T 2r6j_A          204 DPRALNRVVIYRPSTNIITQLELISRWEKKI-GKKFKK  240 (318)
T ss_dssp             CGGGTTEEEECCCGGGEEEHHHHHHHHHHHH-TCCCEE
T ss_pred             CccccCeEEEecCCCCccCHHHHHHHHHHHh-CCCCce
Confidence            765444 45543  46799999999999999 665543

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.95  E-value=1.3e-26  Score=194.38  Aligned_cols=223  Identities=18%  Similarity=0.153  Sum_probs=160.6

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +++|+++||||+++||+++++.|+++|+ +|++.+|+.+..+......  + .++..+++|++|+++++++++       
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~--g-~~~~~~~~Dv~~~~~v~~~~~~~~~~~G  102 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEI--G-GGAVGIQADSANLAELDRLYEKVKAEAG  102 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH--C-TTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHc--C-CCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            6789999999999999999999999999 8999999765544332211  1 167889999999999888775       


Q ss_pred             CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcccccCCCCc
Q 021819           80 GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (307)
Q Consensus        80 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~  153 (307)
                      ++|++|||||....    +...++|++.+++|+.++.++.+++...  ..+++|++||+.+..+.+..            
T Consensus       103 ~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~~------------  170 (273)
T 4fgs_A          103 RIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAF------------  170 (273)
T ss_dssp             CEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTTC------------
T ss_pred             CCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCCc------------
Confidence            57999999997654    2334567999999999999999998654  22579999998876655543            


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcc----hHHHHHHHHcCCCCCCCCccc
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNA----SCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~  226 (307)
                              ..|+.+|.....+.+.++.+   +||++++|.||.|.++........    ...+.+.+....|      ..
T Consensus       171 --------~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~P------lg  236 (273)
T 4fgs_A          171 --------SVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVP------MG  236 (273)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHST------TS
T ss_pred             --------hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCC------CC
Confidence                    45777777777777776655   489999999999988764432111    1122233333222      23


Q ss_pred             CcccHHHHHHHHHHhhcC--CCCCceEEecCCccc
Q 021819          227 GAVPVKDVAKAQVLLFES--PAASGRYLCTNGIYQ  259 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~~~  259 (307)
                      .+..++|+|.++++++..  ....|..+..|++.+
T Consensus       237 R~g~peeiA~~v~FLaSd~a~~iTG~~i~VDGG~s  271 (273)
T 4fgs_A          237 RVGRAEEVAAAALFLASDDSSFVTGAELFVDGGSA  271 (273)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCcCHHHHHHHHHHHhCchhcCccCCeEeECcChh
Confidence            467899999999988853  334577776666543

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.95  E-value=1.1e-26  Score=193.90  Aligned_cols=214  Identities=17%  Similarity=0.186  Sum_probs=157.6

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHH-CCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-----Cc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLD-NNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----GC   81 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~-~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----~~   81 (307)
                      +||+++||||+|+||+++++.|++ .|+ .|++.+|+......          .+.++++|++|+++++++++     ++
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~-~v~~~~~~~~~~~~----------~~~~~~~Dv~~~~~v~~~~~~~~~~~i   71 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNH-TVINIDIQQSFSAE----------NLKFIKADLTKQQDITNVLDIIKNVSF   71 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTE-EEEEEESSCCCCCT----------TEEEEECCTTCHHHHHHHHHHTTTCCE
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCc-EEEEeccccccccc----------cceEEecCcCCHHHHHHHHHHHHhCCC
Confidence            578999999999999999999999 677 88888886542111          67899999999999998886     78


Q ss_pred             cEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHhcC--CcEEEEecCcceeccCCCCCCcccccCCCCchh
Q 021819           82 KGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRFG--VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (307)
Q Consensus        82 d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~  155 (307)
                      |++|||||....    ....+++++.+++|+.++.++++++...-  .+++|++||..+..+.+..              
T Consensus        72 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~--------------  137 (244)
T 4e4y_A           72 DGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPNS--------------  137 (244)
T ss_dssp             EEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTTB--------------
T ss_pred             CEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCCC--------------
Confidence            999999998643    22334568899999999999999997652  2589999997765544332              


Q ss_pred             hhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcc--------hHHHHHHHHcCCCCCCCCc
Q 021819          156 YCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNA--------SCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~  224 (307)
                            ..|+.+|...+.+.+.++.+   .|+++++++||.|.++........        ............      .
T Consensus       138 ------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p  205 (244)
T 4e4y_A          138 ------FAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEF------P  205 (244)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTS------T
T ss_pred             ------chhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcC------C
Confidence                  56999999999999888764   589999999999988753211000        000111222211      2


Q ss_pred             ccCcccHHHHHHHHHHhhcCC--CCCceEEecCCcc
Q 021819          225 WLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIY  258 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~  258 (307)
                      ...+.+++|+|+++++++..+  ...|..+..++++
T Consensus       206 ~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~  241 (244)
T 4e4y_A          206 LNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDGGY  241 (244)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCCcCHHHHHHHHHHHhcCccccccCCeEeECCCc
Confidence            355789999999999999653  3457655445444

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.95  E-value=4.6e-26  Score=191.22  Aligned_cols=215  Identities=17%  Similarity=0.110  Sum_probs=155.4

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------C
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~   80 (307)
                      ++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+....  . .++.++.+|++|+++++++++       +
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATAREL--G-DAARYQHLDVTIEEDWQRVVAYAREEFGS   79 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTT--G-GGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh--C-CceeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999 8999999765443322211  1 168889999999999888876       7


Q ss_pred             ccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHH----HHhcCCcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEA----AKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        81 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      +|+||||||.....    ...+++...+++|+.++.++.++    +++.+.++||++||..+..+.+..           
T Consensus        80 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  148 (254)
T 1hdc_A           80 VDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALT-----------  148 (254)
T ss_dssp             CCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC-----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCc-----------
Confidence            89999999976431    23345688999999999865554    455667899999997765443332           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC-C-CcccC
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ-E-YHWLG  227 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~  227 (307)
                               ..|+.+|...+.+.+.++.+   .++++++++||.|+++....           ......... . .....
T Consensus       149 ---------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------~~~~~~~~~~~~~p~~~  208 (254)
T 1hdc_A          149 ---------SSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAE-----------TGIRQGEGNYPNTPMGR  208 (254)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH-----------HTCCCSTTSCTTSTTSS
T ss_pred             ---------hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccc-----------cchhHHHHHHhcCCCCC
Confidence                     57999999999999888766   48999999999998864210           000000000 1 11234


Q ss_pred             cc-cHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          228 AV-PVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       228 ~i-~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                      +. +++|+|+++++++..+  ...|.++..+++
T Consensus       209 ~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  241 (254)
T 1hdc_A          209 VGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGG  241 (254)
T ss_dssp             CB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCHHHHHHHHHHHhCchhcCCCCCEEEECCC
Confidence            67 9999999999998754  344665444433

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.95  E-value=3.2e-26  Score=193.57  Aligned_cols=224  Identities=13%  Similarity=0.114  Sum_probs=164.4

Q ss_pred             ccCCcEEEEeCCchh--hHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCC-CCCceEEEEcccCChhHHHHHhc---
Q 021819            6 EKEEETVCVTGANGF--IGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA-GDANLRVFEADVLDSGAVSRAVE---   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~--iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~i~~D~~d~~~~~~~~~---   79 (307)
                      ++++|+++||||+|+  ||+++++.|+++|+ +|++++|+....+.+..+... ...++.++++|++|+++++++++   
T Consensus         4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (266)
T 3oig_A            4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIK   82 (266)
T ss_dssp             CCTTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred             ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence            456889999999977  99999999999999 899999875433333222111 11168899999999999888776   


Q ss_pred             ----CccEEEEeccCCCC--------CCCCChhhhhhhhhHHHHHHHHHHHHhcC--CcEEEEecCcceeccCCCCCCcc
Q 021819           80 ----GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRFG--VRRVVVTSSISAIVPNPGWKGKV  145 (307)
Q Consensus        80 ----~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~iSS~~~~~~~~~~~~~~  145 (307)
                          .+|++|||||....        ....+.+...+++|+.++.++++++...-  .++||++||..+..+.+..    
T Consensus        83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~----  158 (266)
T 3oig_A           83 EQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPNY----  158 (266)
T ss_dssp             HHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTT----
T ss_pred             HHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCCc----
Confidence                67999999997641        22334567899999999999999997652  3689999998775554332    


Q ss_pred             cccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCC
Q 021819          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (307)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (307)
                                      ..|+.+|...+.+.+.++.+.   |+++++++||.|.++....... ............+    
T Consensus       159 ----------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~----  217 (266)
T 3oig_A          159 ----------------NVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISD-FNSILKDIEERAP----  217 (266)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTT-HHHHHHHHHHHST----
T ss_pred             ----------------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccc-hHHHHHHHHhcCC----
Confidence                            579999999999998887664   8999999999999976554322 2233333333222    


Q ss_pred             CcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          223 YHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       223 ~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                        ...+.+++|+|+++++++...  ...|..+..+++
T Consensus       218 --~~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG  252 (266)
T 3oig_A          218 --LRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSG  252 (266)
T ss_dssp             --TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --CCCCCCHHHHHHHHHHHcCCchhcCcCCEEEECCC
Confidence              245689999999999999753  345765444444

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.95  E-value=6.4e-27  Score=197.20  Aligned_cols=210  Identities=17%  Similarity=0.123  Sum_probs=149.9

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------C
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~   80 (307)
                      ++|+++||||+|+||+++++.|+++|+ +|++.+|+.+..+.+.........++.++.+|++|+++++++++       +
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            367999999999999999999999999 89999997655433322111111168889999999999888775       6


Q ss_pred             ccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        81 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      +|++|||||.....    ...+.+.+.+++|+.++.++.+++.    +.+.++||++||..+..+.+..           
T Consensus        82 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~-----------  150 (264)
T 3tfo_A           82 IDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTA-----------  150 (264)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTC-----------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCC-----------
Confidence            89999999986542    2334568899999999998888874    3456899999998776554442           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHhc-CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccH
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKH-GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPV  231 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  231 (307)
                               ..|+.+|...+.+.+.++.+. ++++++|+||.|.++.........   ....       .......++++
T Consensus       151 ---------~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~~~---~~~~-------~~~~~~~~~~p  211 (264)
T 3tfo_A          151 ---------AVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITHEE---TMAA-------MDTYRAIALQP  211 (264)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC---------------------------------CCCH
T ss_pred             ---------hhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccchh---HHHH-------HHhhhccCCCH
Confidence                     569999999999999888775 899999999999887643221000   0000       00011124789


Q ss_pred             HHHHHHHHHhhcCCCCC
Q 021819          232 KDVAKAQVLLFESPAAS  248 (307)
Q Consensus       232 ~dva~~~~~~~~~~~~~  248 (307)
                      +|+|+++++++..+...
T Consensus       212 edvA~~v~~l~s~~~~~  228 (264)
T 3tfo_A          212 ADIARAVRQVIEAPQSV  228 (264)
T ss_dssp             HHHHHHHHHHHHSCTTE
T ss_pred             HHHHHHHHHHhcCCccC
Confidence            99999999999987654

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.95  E-value=5.1e-27  Score=198.95  Aligned_cols=222  Identities=17%  Similarity=0.113  Sum_probs=158.7

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC-CcccccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      ++++|+|+||||+|+||++++++|+++|+ +|++++|+... .+.+.........++.++++|++|++++.++++     
T Consensus        26 ~l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~  104 (271)
T 4iin_A           26 QFTGKNVLITGASKGIGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS  104 (271)
T ss_dssp             CCSCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            45678999999999999999999999999 89999985433 222221111111278899999999999888876     


Q ss_pred             --CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                        ++|+||||||.....    ...+++.+.+++|+.++.++++++.    +.+.++||++||..+..+.+..        
T Consensus       105 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  176 (271)
T 4iin_A          105 DGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQ--------  176 (271)
T ss_dssp             HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC--------
T ss_pred             cCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCc--------
Confidence              789999999986542    2234568899999999999888874    3466799999998776554442        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                                  ..|+.+|.+.+.+.+.++.+   .++++++++||.|.++.......   ........      .....
T Consensus       177 ------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~---~~~~~~~~------~~~~~  235 (271)
T 4iin_A          177 ------------TNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKD---ELKADYVK------NIPLN  235 (271)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC---------------CGG------GCTTC
T ss_pred             ------------hHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcH---HHHHHHHh------cCCcC
Confidence                        57999999999999888776   58999999999998876433210   11111111      11235


Q ss_pred             CcccHHHHHHHHHHhhcCCC--CCceEEecCCc
Q 021819          227 GAVPVKDVAKAQVLLFESPA--ASGRYLCTNGI  257 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~~--~~g~~~~~~~~  257 (307)
                      .+.+++|+|+++++++..+.  ..|..+..+++
T Consensus       236 ~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG  268 (271)
T 4iin_A          236 RLGSAKEVAEAVAFLLSDHSSYITGETLKVNGG  268 (271)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCCC
Confidence            67899999999999987543  45765444443

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.95  E-value=9.2e-27  Score=195.97  Aligned_cols=221  Identities=18%  Similarity=0.197  Sum_probs=157.5

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC--Ccccc-cCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~--~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      +|+++||||+|+||+++++.|+++|+ +|++++|+...  .+.+. .+..... ++.++++|++|+++++++++      
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADLPQQEEQAAETIKLIEAADQ-KAVFVGLDVTDKANFDSAIDEAAEKL   79 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEECGGGHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            57999999999999999999999999 89999987654  22221 1111112 68899999999999888776      


Q ss_pred             -CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cCC-cEEEEecCcceeccCCCCCCcccccC
Q 021819           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGV-RRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                       ++|+||||||.....    ...+++...+++|+.++.++++++.+    .+. ++||++||..+..+.+..        
T Consensus        80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  151 (258)
T 3a28_C           80 GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPIL--------  151 (258)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTC--------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCc--------
Confidence             789999999976432    23345688999999999999998865    355 799999997765443332        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCC--------cchHHHHHHHHcCCC
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL--------NASCAVLQQLLQGSK  218 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~--------~~~~~~~~~~~~~~~  218 (307)
                                  ..|+.+|...+.+.+.++.+   .++++++++||.|.++......        .............. 
T Consensus       152 ------------~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  218 (258)
T 3a28_C          152 ------------SAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSI-  218 (258)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTC-
T ss_pred             ------------hhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcC-
Confidence                        57999999999999888765   4899999999999876421100        00001111111111 


Q ss_pred             CCCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          219 DTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       219 ~~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                           ....+.+++|+|+++++++..+  ...|..+..+++
T Consensus       219 -----p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  254 (258)
T 3a28_C          219 -----ALGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGG  254 (258)
T ss_dssp             -----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             -----CCCCccCHHHHHHHHHHHhCcccCCCCCCEEEECCC
Confidence                 1235789999999999998654  345665444433

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.94  E-value=8.9e-27  Score=195.21  Aligned_cols=219  Identities=16%  Similarity=0.160  Sum_probs=155.6

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+......... .++.++.+|++|++++.++++       
T Consensus         4 ~~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (251)
T 1zk4_A            4 LDGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTP-DQIQFFQHDSSDEDGWTKLFDATEKAFG   81 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhcc-CceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            4578999999999999999999999999 8999999764433221111111 178999999999999888776       


Q ss_pred             CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCC-cEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGV-RRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                      .+|+||||||.....    ...+++.+.+++|+.++.++.+++    ++.+. ++||++||..+..+.+..         
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~---------  152 (251)
T 1zk4_A           82 PVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSL---------  152 (251)
T ss_dssp             SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTC---------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCC---------
Confidence            489999999976432    223345789999999887776665    44565 799999997765443332         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHH-----hcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcc
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAE-----KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~-----~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                                 ..|+.+|...+.+.+.++.     ..+++++++|||.++++.......   ........ .    ....
T Consensus       153 -----------~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~-~----~~~~  213 (251)
T 1zk4_A          153 -----------GAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG---AEEAMSQR-T----KTPM  213 (251)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT---HHHHHTST-T----TCTT
T ss_pred             -----------ccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCc---hhhhHHHh-h----cCCC
Confidence                       5799999999999887765     458999999999999875432211   11111000 1    0123


Q ss_pred             cCcccHHHHHHHHHHhhcCCC--CCce-EEecC
Q 021819          226 LGAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~~--~~g~-~~~~~  255 (307)
                      ..+++++|+|+++++++..+.  ..|. +++.+
T Consensus       214 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  246 (251)
T 1zk4_A          214 GHIGEPNDIAYICVYLASNESKFATGSEFVVDG  246 (251)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCcCHHHHHHHHHHHcCcccccccCcEEEECC
Confidence            457899999999999987542  3465 44443

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.94  E-value=1.7e-26  Score=192.65  Aligned_cols=201  Identities=14%  Similarity=0.072  Sum_probs=152.5

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCC------eEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc---
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYT------SINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~------~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~---   79 (307)
                      +|+|+||||+|+||++++++|+++|+.      +|++++|+....+.+.........++.++.+|++|++++.++++   
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            578999999999999999999999984      68888887544333221110111168899999999999888876   


Q ss_pred             ----CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcccc
Q 021819           80 ----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        80 ----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                          ++|+||||||.....    ...+.+...+++|+.++.++++++..    .+.++||++||..+..+.+..      
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~------  155 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHS------  155 (244)
T ss_dssp             HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC------
T ss_pred             HhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCC------
Confidence                689999999976432    22345688999999999999998843    466899999997765443322      


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCc
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (307)
                                    ..|+.+|...+.+.+.++.+   .+++++++|||.|+|+........                  .
T Consensus       156 --------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~------------------~  203 (244)
T 2bd0_A          156 --------------SIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDE------------------M  203 (244)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCST------------------T
T ss_pred             --------------chhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhcccc------------------c
Confidence                          57999999999998877654   589999999999999875432110                  0


Q ss_pred             ccCcccHHHHHHHHHHhhcCCCC
Q 021819          225 WLGAVPVKDVAKAQVLLFESPAA  247 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~~~  247 (307)
                      ...+++++|+|+++++++..+..
T Consensus       204 ~~~~~~~~dva~~~~~l~~~~~~  226 (244)
T 2bd0_A          204 QALMMMPEDIAAPVVQAYLQPSR  226 (244)
T ss_dssp             GGGSBCHHHHHHHHHHHHTSCTT
T ss_pred             cccCCCHHHHHHHHHHHHhCCcc
Confidence            12578999999999999986543

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.94  E-value=3.8e-27  Score=203.23  Aligned_cols=225  Identities=13%  Similarity=0.127  Sum_probs=159.4

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC-C------CCcccccCCCCCCCceEEEEcccCChhHHHHHhcCc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-S------DSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC   81 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~-~------~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~   81 (307)
                      ||+|+||||||+||++|++.|+++|+ +|++++|++ .      +.+.+..+..   .+++++.+|++|++++.++++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~l~~---~~v~~v~~D~~d~~~l~~~~~~~   77 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGN-PTYALVRKTITAANPETKEELIDNYQS---LGVILLEGDINDHETLVKAIKQV   77 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTC-CEEEEECCSCCSSCHHHHHHHHHHHHH---TTCEEEECCTTCHHHHHHHHTTC
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCC-cEEEEECCCcccCChHHHHHHHHHHHh---CCCEEEEeCCCCHHHHHHHHhCC
Confidence            57899999999999999999999998 899999976 1      1111111100   16889999999999999999999


Q ss_pred             cEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcC-CcEEEEecCcceeccCCCCCCcccccCCCCchhhhccc
Q 021819           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR  160 (307)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  160 (307)
                      |+|||+++...               +.++.+++++|++.| +++||+ |+.+.   .       .+|..+..|..    
T Consensus        78 d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~~g~---~-------~~~~~~~~p~~----  127 (307)
T 2gas_A           78 DIVICAAGRLL---------------IEDQVKIIKAIKEAGNVKKFFP-SEFGL---D-------VDRHDAVEPVR----  127 (307)
T ss_dssp             SEEEECSSSSC---------------GGGHHHHHHHHHHHCCCSEEEC-SCCSS---C-------TTSCCCCTTHH----
T ss_pred             CEEEECCcccc---------------cccHHHHHHHHHhcCCceEEee-ccccc---C-------cccccCCCcch----
Confidence            99999998632               446789999999998 999984 43211   1       12222222211    


Q ss_pred             CccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCC---CCCcccCcccHHHHHHH
Q 021819          161 KKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT---QEYHWLGAVPVKDVAKA  237 (307)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~dva~~  237 (307)
                       ..| .+|..+|.+++    +.+++++++||+.++++.........    .....+....   .++..+++++++|+|++
T Consensus       128 -~~y-~sK~~~e~~~~----~~~i~~~~lrp~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  197 (307)
T 2gas_A          128 -QVF-EEKASIRRVIE----AEGVPYTYLCCHAFTGYFLRNLAQLD----ATDPPRDKVVILGDGNVKGAYVTEADVGTF  197 (307)
T ss_dssp             -HHH-HHHHHHHHHHH----HHTCCBEEEECCEETTTTGGGTTCTT----CSSCCSSEEEEETTSCSEEEEECHHHHHHH
T ss_pred             -hHH-HHHHHHHHHHH----HcCCCeEEEEcceeeccccccccccc----cccCCCCeEEEecCCCcceEEeeHHHHHHH
Confidence             468 99999998886    46899999999998886432211000    0000111111   13467899999999999


Q ss_pred             HHHhhcCCCCCc-eEEec--CCcccHHHHHHHHHHhCCCCCCCc
Q 021819          238 QVLLFESPAASG-RYLCT--NGIYQFGDFAERVSKLFPEFPVHR  278 (307)
Q Consensus       238 ~~~~~~~~~~~g-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  278 (307)
                      ++.++.++...+ .+++.  ++.+|+.|+++.+.+.+ +.+++.
T Consensus       198 ~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~-g~~~~~  240 (307)
T 2gas_A          198 TIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKI-GKTLEK  240 (307)
T ss_dssp             HHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHH-TSCCEE
T ss_pred             HHHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHHh-CCCCce
Confidence            999998776444 45443  35799999999999999 555543

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.94  E-value=4e-26  Score=196.07  Aligned_cols=226  Identities=19%  Similarity=0.090  Sum_probs=160.5

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC---------ccc----ccCCCCCCCceEEEEcccCChh
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---------SHL----FALPGAGDANLRVFEADVLDSG   72 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~---------~~~----~~~~~~~~~~~~~i~~D~~d~~   72 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++++|++...         +.+    ..+..... ++.++++|++|++
T Consensus        25 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~  102 (299)
T 3t7c_A           25 KVEGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGR-RIIASQVDVRDFD  102 (299)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHH
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcCC-ceEEEECCCCCHH
Confidence            45688999999999999999999999999 899988863211         111    11111112 7889999999999


Q ss_pred             HHHHHhc-------CccEEEEeccCCCCCC-----CCChhhhhhhhhHHHHHHHHHHHHhc-----CCcEEEEecCccee
Q 021819           73 AVSRAVE-------GCKGVFHVASPCTLED-----PVDPEKELILPAVQGTLNVLEAAKRF-----GVRRVVVTSSISAI  135 (307)
Q Consensus        73 ~~~~~~~-------~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~iSS~~~~  135 (307)
                      +++++++       ++|++|||||......     ..+++...+++|+.++.++++++...     +.++||++||..+.
T Consensus       103 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~  182 (299)
T 3t7c_A          103 AMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGL  182 (299)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhc
Confidence            9888876       6899999999765422     33456899999999999999987432     35799999998775


Q ss_pred             ccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCC---------
Q 021819          136 VPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYL---------  203 (307)
Q Consensus       136 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~---------  203 (307)
                      .+.+..                    ..|+.+|...+.+.+.++.+.   |+++++|+||.|.++......         
T Consensus       183 ~~~~~~--------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~  242 (299)
T 3t7c_A          183 RGAENI--------------------GNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDL  242 (299)
T ss_dssp             SCCTTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTS
T ss_pred             cCCCCc--------------------chHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhh
Confidence            554432                    579999999999998887764   899999999999998754310         


Q ss_pred             --cchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCcc
Q 021819          204 --NASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIY  258 (307)
Q Consensus       204 --~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~  258 (307)
                        .....+.........     ....+.+++|+|+++++++...  ...|..+..+++.
T Consensus       243 ~~~~~~~~~~~~~~~~~-----~p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~  296 (299)
T 3t7c_A          243 ENPTVEDFQVASRQMHV-----LPIPYVEPADISNAILFLVSDDARYITGVSLPVDGGA  296 (299)
T ss_dssp             SSCCHHHHHHHHHHHSS-----SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             ccchhhHHHHHhhhhcc-----cCcCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCc
Confidence              000000000000000     1145789999999999998643  3457655444443

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.94  E-value=1.7e-26  Score=194.11  Aligned_cols=219  Identities=16%  Similarity=0.145  Sum_probs=158.7

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEe-CCCCCCccc-ccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATV-FPGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~-r~~~~~~~~-~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      .++|+|+||||+|+||++++++|+++|+ +|++.+ |+....... ..+..... ++.++.+|++|.++++++++     
T Consensus        11 ~~~k~vlITGas~giG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (256)
T 3ezl_A           11 MSQRIAYVTGGMGGIGTSICQRLHKDGF-RVVAGCGPNSPRRVKWLEDQKALGF-DFYASEGNVGDWDSTKQAFDKVKAE   88 (256)
T ss_dssp             --CEEEEETTTTSHHHHHHHHHHHHTTE-EEEEEECTTCSSHHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCC-eeEEEecCCCCHHHHHHHHHHHHHh
Confidence            4578999999999999999999999999 888877 444333221 11111112 68899999999999888876     


Q ss_pred             --CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                        ++|+||||||.....    ...+++.+.+++|+.++.++++++    ++.+.++||++||..+..+.+..        
T Consensus        89 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  160 (256)
T 3ezl_A           89 VGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQ--------  160 (256)
T ss_dssp             TCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCC--------
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCC--------
Confidence              679999999976542    223456789999999988887776    44566899999998776655443        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                                  ..|+.+|.+.+.+.+.++.+   .++++++++||.|.++.....   ............+      ..
T Consensus       161 ------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~------~~  219 (256)
T 3ezl_A          161 ------------TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI---RPDVLEKIVATIP------VR  219 (256)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---CHHHHHHHHHHST------TS
T ss_pred             ------------cccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccccc---CHHHHHHHHhcCC------CC
Confidence                        57999999999998888766   489999999999988754332   1233333333222      34


Q ss_pred             CcccHHHHHHHHHHhhcCC--CCCceEEecCC
Q 021819          227 GAVPVKDVAKAQVLLFESP--AASGRYLCTNG  256 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~  256 (307)
                      .+.+++|+|+++++++...  ...|..+..++
T Consensus       220 ~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdg  251 (256)
T 3ezl_A          220 RLGSPDEIGSIVAWLASEESGFSTGADFSLNG  251 (256)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCcCHHHHHHHHHHHhCCcccCCcCcEEEECC
Confidence            5779999999999988543  34566443333

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.94  E-value=4.6e-26  Score=191.21  Aligned_cols=228  Identities=15%  Similarity=0.113  Sum_probs=165.3

Q ss_pred             ccccCCcEEEEeCCch--hhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCC-CCCCCceEEEEcccCChhHHHHHhc-
Q 021819            4 EAEKEEETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP-GAGDANLRVFEADVLDSGAVSRAVE-   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG--~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~i~~D~~d~~~~~~~~~-   79 (307)
                      |+++++|+++||||+|  +||+++++.|+++|+ +|++.+|+.+..+.+..+. .....++..+++|++|++++.++++ 
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   79 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQ   79 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHH
Confidence            6778899999999887  999999999999999 8999999766544433321 1122268899999999999887775 


Q ss_pred             ------CccEEEEeccCCCCC--------CCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCC
Q 021819           80 ------GCKGVFHVASPCTLE--------DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKG  143 (307)
Q Consensus        80 ------~~d~vi~~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~  143 (307)
                            ++|++|||||.....        ...+++...+++|+.++..+.+.+...  +.++||++||+.+..+.+..  
T Consensus        80 ~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~~--  157 (256)
T 4fs3_A           80 IGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNY--  157 (256)
T ss_dssp             HHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTTT--
T ss_pred             HHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcccc--
Confidence                  689999999975431        122334667889999999988887654  23689999998876655543  


Q ss_pred             cccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCC
Q 021819          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT  220 (307)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  220 (307)
                                        ..|+.+|...+.+.+.++.+   +||++++|.||.|.++...... ......+.+....|  
T Consensus       158 ------------------~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~-~~~~~~~~~~~~~P--  216 (256)
T 4fs3_A          158 ------------------NVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVG-GFNTILKEIKERAP--  216 (256)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT-THHHHHHHHHHHST--
T ss_pred             ------------------hhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhcc-CCHHHHHHHHhcCC--
Confidence                              45777777777776666554   5899999999999887654432 22344444444333  


Q ss_pred             CCCcccCcccHHHHHHHHHHhhcC--CCCCceEEecCCccc
Q 021819          221 QEYHWLGAVPVKDVAKAQVLLFES--PAASGRYLCTNGIYQ  259 (307)
Q Consensus       221 ~~~~~~~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~~~  259 (307)
                          ...+..++|+|.++++++..  ....|..+..|++++
T Consensus       217 ----l~R~g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG~~  253 (256)
T 4fs3_A          217 ----LKRNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSGFH  253 (256)
T ss_dssp             ----TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ----CCCCcCHHHHHHHHHHHhCchhcCccCCEEEECcCHH
Confidence                23467899999999988853  334577777776654

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.94  E-value=7.5e-27  Score=196.91  Aligned_cols=219  Identities=22%  Similarity=0.179  Sum_probs=158.3

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+.....   .++.++.+|++|+++++++++      
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALE---AEAIAVVADVSDPKAVEAVFAEALEEF   78 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCC---SSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhc---CceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            34578999999999999999999999999 99999997654433322211   168899999999999888776      


Q ss_pred             -CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhcC--CcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRFG--VRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                       .+|++|||||.....    ...+++++.+++|+.++.++++++...-  .++||++||..+. +.+.            
T Consensus        79 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~~------------  145 (263)
T 2a4k_A           79 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAFG------------  145 (263)
T ss_dssp             SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHHH------------
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCCC------------
Confidence             479999999976532    1233457889999999999999987642  4689999997654 2111            


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcc
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (307)
                         .     ..|+.+|...+.+.+.++.+   .|+++++++||.|.++.....   ............+      ...+.
T Consensus       146 ---~-----~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~p------~~~~~  208 (263)
T 2a4k_A          146 ---L-----AHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL---PPWAWEQEVGASP------LGRAG  208 (263)
T ss_dssp             ---H-----HHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS---CHHHHHHHHHTST------TCSCB
T ss_pred             ---c-----HHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc---CHHHHHHHHhcCC------CCCCc
Confidence               1     46888888887777766654   489999999999999865432   1222223333222      23578


Q ss_pred             cHHHHHHHHHHhhcCC--CCCceEEecCCcc
Q 021819          230 PVKDVAKAQVLLFESP--AASGRYLCTNGIY  258 (307)
Q Consensus       230 ~~~dva~~~~~~~~~~--~~~g~~~~~~~~~  258 (307)
                      +++|+|+++++++..+  ...|..+..+++.
T Consensus       209 ~p~dvA~~v~~l~s~~~~~~tG~~i~vdgG~  239 (263)
T 2a4k_A          209 RPEEVAQAALFLLSEESAYITGQALYVDGGR  239 (263)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CHHHHHHHHHHHhCccccCCcCCEEEECCCc
Confidence            9999999999998753  2457655444443

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.94  E-value=2.5e-26  Score=195.64  Aligned_cols=224  Identities=13%  Similarity=0.048  Sum_probs=163.4

Q ss_pred             ccccCCcEEEEeCCchh--hHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--
Q 021819            4 EAEKEEETVCVTGANGF--IGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~--iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--   79 (307)
                      |..+++|+++||||+|+  ||+++++.|+++|+ +|++++|+. ..+.+..+..... ++.++.+|++|.++++++++  
T Consensus        21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~-~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~   97 (280)
T 3nrc_A           21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVGQ-FKDRVEKLCAEFN-PAAVLPCDVISDQEIKDLFVEL   97 (280)
T ss_dssp             -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECTT-CHHHHHHHHGGGC-CSEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCch-HHHHHHHHHHhcC-CceEEEeecCCHHHHHHHHHHH
Confidence            55667899999999955  99999999999999 899999976 2222222211112 57899999999999888875  


Q ss_pred             -----CccEEEEeccCCCCC---------CCCChhhhhhhhhHHHHHHHHHHHHhc---CCcEEEEecCcceeccCCCCC
Q 021819           80 -----GCKGVFHVASPCTLE---------DPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWK  142 (307)
Q Consensus        80 -----~~d~vi~~a~~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~iSS~~~~~~~~~~~  142 (307)
                           ++|+||||||.....         ...+.+...+++|+.++.++++++...   ..++||++||..+..+.+.. 
T Consensus        98 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-  176 (280)
T 3nrc_A           98 GKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSY-  176 (280)
T ss_dssp             HHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTTT-
T ss_pred             HHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCCc-
Confidence                 469999999986531         334456789999999999999998653   34799999998775544332 


Q ss_pred             CcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCC
Q 021819          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD  219 (307)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  219 (307)
                                         ..|+.+|.+.+.+.+.++.+   .++++++++||.|.++....... ............+ 
T Consensus       177 -------------------~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p-  235 (280)
T 3nrc_A          177 -------------------NTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISN-FKKMLDYNAMVSP-  235 (280)
T ss_dssp             -------------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTT-HHHHHHHHHHHST-
T ss_pred             -------------------hhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcc-hHHHHHHHHhcCC-
Confidence                               57999999999999888766   58999999999999987544321 2233333333222 


Q ss_pred             CCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          220 TQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       220 ~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                           ...+.+++|+|+++++++...  ...|..+..+++
T Consensus       236 -----~~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG  270 (280)
T 3nrc_A          236 -----LKKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAG  270 (280)
T ss_dssp             -----TCSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred             -----CCCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCC
Confidence                 345689999999999998753  345765444443

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.94  E-value=1.7e-27  Score=206.72  Aligned_cols=233  Identities=18%  Similarity=0.192  Sum_probs=167.1

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCC----------CCCCcccc-cCCCCCCCceEEEEcccCChh
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP----------GSDSSHLF-ALPGAGDANLRVFEADVLDSG   72 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~----------~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~   72 (307)
                      |..+++|+++||||+|+||+++++.|+++|+ +|++++|+          ....+.+. .+..... ++.++.+|++|++
T Consensus        22 m~~l~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~   99 (322)
T 3qlj_A           22 MGVVDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGG-EAVADGSNVADWD   99 (322)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTC-EEEEECCCTTSHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCcccccccccccHHHHHHHHHHHHhcCC-cEEEEECCCCCHH
Confidence            4456789999999999999999999999999 89998886          22221111 1111112 6888999999999


Q ss_pred             HHHHHhc-------CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhcC----------CcEEEEecC
Q 021819           73 AVSRAVE-------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRFG----------VRRVVVTSS  131 (307)
Q Consensus        73 ~~~~~~~-------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~----------~~~~v~iSS  131 (307)
                      ++.++++       ++|+||||||.....    ...+++.+.+++|+.++.++++++...-          .++||++||
T Consensus       100 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS  179 (322)
T 3qlj_A          100 QAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSS  179 (322)
T ss_dssp             HHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcC
Confidence            9888876       789999999986542    2334568899999999999999884321          158999999


Q ss_pred             cceeccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHH
Q 021819          132 ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCA  208 (307)
Q Consensus       132 ~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~  208 (307)
                      ..+..+.+..                    ..|+.+|...+.+.+.++.+   .|+++++|+|| +.++.......... 
T Consensus       180 ~~~~~~~~~~--------------------~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~-  237 (322)
T 3qlj_A          180 GAGLQGSVGQ--------------------GNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMM-  237 (322)
T ss_dssp             HHHHHCBTTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC---
T ss_pred             HHHccCCCCC--------------------ccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhh-
Confidence            8776554442                    57999999999999888877   58999999999 77765443211110 


Q ss_pred             HHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCCC--CCce-EEecCC------------------cccHHHHHHHH
Q 021819          209 VLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTNG------------------IYQFGDFAERV  267 (307)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~--~~g~-~~~~~~------------------~~~~~~~~~~~  267 (307)
                        .         .+.....+++++|+|+++++++....  ..|. +++.++                  .++..++++.+
T Consensus       238 --~---------~~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~  306 (322)
T 3qlj_A          238 --A---------TQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVV  306 (322)
T ss_dssp             -----------------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHH
T ss_pred             --h---------ccccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHH
Confidence              0         01123456789999999999886433  3454 334332                  12668899888


Q ss_pred             HHhC
Q 021819          268 SKLF  271 (307)
Q Consensus       268 ~~~~  271 (307)
                      .+.+
T Consensus       307 ~~~~  310 (322)
T 3qlj_A          307 ADLL  310 (322)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            8887

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.94  E-value=5.1e-27  Score=196.97  Aligned_cols=219  Identities=15%  Similarity=0.135  Sum_probs=137.4

Q ss_pred             cccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         5 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      +++++|+++||||+|+||++++++|+++|+ +|++++|+.+..+.+.........++.++.+|++|+++++++++     
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE   83 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            446688999999999999999999999999 89999997655443322111111268899999999999888876     


Q ss_pred             --CccEEEEeccCCCC-------CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCccc
Q 021819           80 --GCKGVFHVASPCTL-------EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVF  146 (307)
Q Consensus        80 --~~d~vi~~a~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~  146 (307)
                        ++|+||||||....       ....+.+.+.+++|+.++.++++++    ++.+.++||++||..++.   ..     
T Consensus        84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---~~-----  155 (253)
T 3qiv_A           84 FGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL---YS-----  155 (253)
T ss_dssp             HSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC---------------
T ss_pred             cCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC---CC-----
Confidence              78999999997421       2233456789999999977776665    445668999999976531   11     


Q ss_pred             ccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCC
Q 021819          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (307)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (307)
                                     ..|+.+|...+.+.+.++.+.   ++++++++||.|+++......  ...+......+.      
T Consensus       156 ---------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~------  212 (253)
T 3qiv_A          156 ---------------NYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTT--PKEMVDDIVKGL------  212 (253)
T ss_dssp             -------------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC--------------------------------
T ss_pred             ---------------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcC--cHHHHHHHhccC------
Confidence                           469999999999999888775   799999999999998654321  111122222211      


Q ss_pred             cccCcccHHHHHHHHHHhhcCCC--CCce-EEecC
Q 021819          224 HWLGAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (307)
Q Consensus       224 ~~~~~i~~~dva~~~~~~~~~~~--~~g~-~~~~~  255 (307)
                      ....+.+++|+|+++++++....  ..|. +++.+
T Consensus       213 ~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdg  247 (253)
T 3qiv_A          213 PLSRMGTPDDLVGMCLFLLSDEASWITGQIFNVDG  247 (253)
T ss_dssp             -------CCHHHHHHHHHHSGGGTTCCSCEEEC--
T ss_pred             CCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECC
Confidence            23446788999999999986533  3465 44443

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.94  E-value=8.8e-27  Score=195.87  Aligned_cols=221  Identities=19%  Similarity=0.176  Sum_probs=156.6

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc-------C
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~   80 (307)
                      +|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+.. +..... ++.++++|++|++++.++++       +
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGG-HAVAVKVDVSDRDQVFAAVEQARKTLGG   79 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999 89999997654332211 111111 68899999999999988876       7


Q ss_pred             ccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cC-CcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        81 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                      +|+||||||.....    ...+++.+.+++|+.++.++++++.+    .+ .++||++||..+.++.+..          
T Consensus        80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  149 (256)
T 1geg_A           80 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPEL----------  149 (256)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTB----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCc----------
Confidence            89999999975431    22345678999999999988887744    34 5799999997765543332          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCc---c-----hHHHHHHHHcCCCCC
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN---A-----SCAVLQQLLQGSKDT  220 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~---~-----~~~~~~~~~~~~~~~  220 (307)
                                ..|+.+|...+.+.+.++.+   .|+++++++||.|.++.......   .     ............   
T Consensus       150 ----------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  216 (256)
T 1geg_A          150 ----------AVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRI---  216 (256)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTC---
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcC---
Confidence                      57999999999999888765   48999999999998864211000   0     000111111111   


Q ss_pred             CCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          221 QEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       221 ~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                         ....+.+++|+|+++++++..+  ...|..+..+++
T Consensus       217 ---p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  252 (256)
T 1geg_A          217 ---TLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGG  252 (256)
T ss_dssp             ---TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             ---CCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence               1235789999999999998654  345665444443

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.94  E-value=1.1e-26  Score=196.30  Aligned_cols=228  Identities=18%  Similarity=0.080  Sum_probs=161.5

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCC-CCCCceEEEEcccCChhHHHHHhc----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPG-AGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~-~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      ++++|+++||||+|+||+++++.|+++|+ +|++.+|+.+..+.... +.. ....++.++.+|++|+++++++++    
T Consensus         5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (265)
T 3lf2_A            5 DLSEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER   83 (265)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            45688999999999999999999999999 89999997654433221 110 111148899999999999888775    


Q ss_pred             ---CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 ---GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                         ++|++|||||....    ....+++.+.+++|+.++.++++++..    .+.++||++||..+..+.+..       
T Consensus        84 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  156 (265)
T 3lf2_A           84 TLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHM-------  156 (265)
T ss_dssp             HHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTB-------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCc-------
Confidence               67999999997654    223345688999999999999998843    455789999997775544332       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCc-------chHHHHHHHHcCCC
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLN-------ASCAVLQQLLQGSK  218 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~-------~~~~~~~~~~~~~~  218 (307)
                                   ..|+.+|...+.+.+.++.+.   |+++++|+||.|.++.......       ....+.........
T Consensus       157 -------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (265)
T 3lf2_A          157 -------------VATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQ  223 (265)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTT
T ss_pred             -------------hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccC
Confidence                         579999999999988887664   8999999999998864211100       01111111111100


Q ss_pred             CCCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCcc
Q 021819          219 DTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIY  258 (307)
Q Consensus       219 ~~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~  258 (307)
                      .    ....+.+++|+|+++++++...  ...|..+..++++
T Consensus       224 ~----p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~  261 (265)
T 3lf2_A          224 I----PLGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGGL  261 (265)
T ss_dssp             C----TTCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSC
T ss_pred             C----CcCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCCC
Confidence            1    2345789999999999988643  3457655544443

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.94  E-value=2.6e-26  Score=194.58  Aligned_cols=222  Identities=14%  Similarity=0.082  Sum_probs=160.2

Q ss_pred             ccCCcEEEEeCCc--hhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            6 EKEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         6 ~~~~~~ilItGat--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      ..++|+|+||||+  |+||+++++.|+++|+ +|++++|+....+.+..+..... ++.++++|++|+++++++++    
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~   88 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFG-SELVFPCDVADDAQIDALFASLKT   88 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcC-CcEEEECCCCCHHHHHHHHHHHHH
Confidence            4568999999999  9999999999999999 89999987544333332211112 57889999999999988876    


Q ss_pred             ---CccEEEEeccCCCC---------CCCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcc
Q 021819           80 ---GCKGVFHVASPCTL---------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKV  145 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~  145 (307)
                         ++|++|||||....         ....+.+...+++|+.++.++++++...  ..++||++||..+..+.+..    
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~----  164 (271)
T 3ek2_A           89 HWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNY----  164 (271)
T ss_dssp             HCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTT----
T ss_pred             HcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCCc----
Confidence               57999999997653         1333456889999999999999999765  23589999998775554332    


Q ss_pred             cccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCC
Q 021819          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (307)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (307)
                                      ..|+.+|.+.+.+.+.++.+.   |+++++++||.|.++..... ..............+    
T Consensus       165 ----------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~----  223 (271)
T 3ek2_A          165 ----------------NTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGI-KSFGKILDFVESNSP----  223 (271)
T ss_dssp             ----------------THHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCC-HHHHHHHHHHHHHST----
T ss_pred             ----------------cchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcc-cchHHHHHHHHhcCC----
Confidence                            579999999999988887653   89999999999999875543 111233333333222    


Q ss_pred             CcccCcccHHHHHHHHHHhhcC--CCCCceEEecCC
Q 021819          223 YHWLGAVPVKDVAKAQVLLFES--PAASGRYLCTNG  256 (307)
Q Consensus       223 ~~~~~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~  256 (307)
                        ...+.+++|+|+++++++..  ....|..+..++
T Consensus       224 --~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdg  257 (271)
T 3ek2_A          224 --LKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDS  257 (271)
T ss_dssp             --TSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEEST
T ss_pred             --cCCCCCHHHHHHHHHHHcCcccCCeeeeEEEECC
Confidence              34568999999999999875  334576543333

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.94  E-value=1e-25  Score=188.89  Aligned_cols=211  Identities=17%  Similarity=0.183  Sum_probs=152.4

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++.+|+.+..+           .+.++++|++|+++++++++      
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~-----------~~~~~~~Dl~d~~~v~~~~~~~~~~~   85 (253)
T 2nm0_A           18 SHMSRSVLVTGGNRGIGLAIARAFADAGD-KVAITYRSGEPPE-----------GFLAVKCDITDTEQVEQAYKEIEETH   85 (253)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCT-----------TSEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHhhc-----------cceEEEecCCCHHHHHHHHHHHHHHc
Confidence            34578999999999999999999999999 8999999754321           36788999999999888776      


Q ss_pred             -CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 -GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                       .+|+||||||....    ....+++.+.+++|+.++.++++++..    .+.++||++||..+..+.+.          
T Consensus        86 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~----------  155 (253)
T 2nm0_A           86 GPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAG----------  155 (253)
T ss_dssp             CSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHH----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCC----------
Confidence             46999999997643    224456789999999999999987743    46689999999765432111          


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                           .     ..|+.+|...+.+.+.++.+   .++++++++||.|.++.......   ..........+      ...
T Consensus       156 -----~-----~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~p------~~~  216 (253)
T 2nm0_A          156 -----Q-----ANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTD---EQRANIVSQVP------LGR  216 (253)
T ss_dssp             -----H-----HHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC------------CHHHHHTTCT------TCS
T ss_pred             -----c-----HHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCH---HHHHHHHhcCC------CCC
Confidence                 1     46999999999999888766   48999999999998876432110   11111222111      235


Q ss_pred             cccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          228 AVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                      +++++|+|+++++++..+  ...|..+..+++
T Consensus       217 ~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdGG  248 (253)
T 2nm0_A          217 YARPEEIAATVRFLASDDASYITGAVIPVDGG  248 (253)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCccccCCcCcEEEECCc
Confidence            789999999999998754  345665544443

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.94  E-value=5.9e-26  Score=189.74  Aligned_cols=209  Identities=22%  Similarity=0.195  Sum_probs=152.5

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      +++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+.. +...+. ++.++++|++|+++++++++      
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~   82 (247)
T 2jah_A            5 LQGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAGA-KVHVLELDVADRQGVDAAVASTVEAL   82 (247)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999 89999997654332221 111111 68899999999999888775      


Q ss_pred             -CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                       ++|++|||||.....    ...+++.+.+++|+.++.++++++..    .+ ++||++||..+..+.+..         
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~---------  152 (247)
T 2jah_A           83 GGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNA---------  152 (247)
T ss_dssp             SCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTC---------
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCC---------
Confidence             689999999976432    22335678899999999999998743    45 799999997765443332         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                                 ..|+.+|...+.+.+.++.+   .|+++++++||.|.++.......  .. ........+     ....
T Consensus       153 -----------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--~~-~~~~~~~~~-----~~~~  213 (247)
T 2jah_A          153 -----------AVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITH--TA-TKEMYEQRI-----SQIR  213 (247)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCC--HH-HHHHHHHHT-----TTSC
T ss_pred             -----------cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccc--hh-hHHHHHhcc-----cccC
Confidence                       56999999999888877765   48999999999999876432211  11 111111101     1122


Q ss_pred             cccHHHHHHHHHHhhcCCC
Q 021819          228 AVPVKDVAKAQVLLFESPA  246 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~~  246 (307)
                      +++++|+|+++++++..+.
T Consensus       214 ~~~pedvA~~v~~l~s~~~  232 (247)
T 2jah_A          214 KLQAQDIAEAVRYAVTAPH  232 (247)
T ss_dssp             CBCHHHHHHHHHHHHHSCT
T ss_pred             CCCHHHHHHHHHHHhCCCc
Confidence            5899999999999998654

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.94  E-value=3.5e-26  Score=189.61  Aligned_cols=193  Identities=20%  Similarity=0.148  Sum_probs=140.0

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------Cc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~~   81 (307)
                      +|+|+||||+|+||+++++.|+++|+ +|++++|+.+..+.+.....    ++.++.+|++|.+++.++++       ++
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGY-RVGLMARDEKRLQALAAELE----GALPLPGDVREEGDWARAVAAMEEAFGEL   79 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhh----hceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            56899999999999999999999999 89999997654433322111    57889999999998887775       68


Q ss_pred             cEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCCCc
Q 021819           82 KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (307)
Q Consensus        82 d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~  153 (307)
                      |+|||+||.....    ...+++...+++|+.++.++++.+    ++.+.++||++||..+..+.+..            
T Consensus        80 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~------------  147 (234)
T 2ehd_A           80 SALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGG------------  147 (234)
T ss_dssp             CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTC------------
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCC------------
Confidence            9999999975432    123456789999999998666654    55667899999997664432221            


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCccc
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  230 (307)
                              ..|+.+|...+.+.+.++.+   .|++++++|||.+.++.....    .    .    .        ..+++
T Consensus       148 --------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----~----~----~--------~~~~~  199 (234)
T 2ehd_A          148 --------AAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT----P----G----Q--------AWKLK  199 (234)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC------------------------------------CC
T ss_pred             --------chhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc----c----c----c--------cCCCC
Confidence                    57999999999888877655   489999999999987653211    0    0    0        01579


Q ss_pred             HHHHHHHHHHhhcCCC
Q 021819          231 VKDVAKAQVLLFESPA  246 (307)
Q Consensus       231 ~~dva~~~~~~~~~~~  246 (307)
                      ++|+|+++++++..+.
T Consensus       200 ~~dvA~~~~~l~~~~~  215 (234)
T 2ehd_A          200 PEDVAQAVLFALEMPG  215 (234)
T ss_dssp             HHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHhCCCc
Confidence            9999999999998654

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.94  E-value=4e-26  Score=191.57  Aligned_cols=216  Identities=18%  Similarity=0.125  Sum_probs=157.2

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCC--CCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g--~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +|+++||||+|+||++++++|+++|  + .|++.+|+.+..+.+....   ..++.++.+|++|+++++++++       
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~-~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDT-VVYGVARSEAPLKKLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGHG   77 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSC-EEEEEESCHHHHHHHHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCe-EEEEecCCHHHHHHHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4799999999999999999999986  5 8888888765443332211   1168899999999999888876       


Q ss_pred             CccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                      ++|++|||||....     ....+++.+.+++|+.++.++++++    ++.+ ++||++||..+..+.+..         
T Consensus        78 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~---------  147 (254)
T 3kzv_A           78 KIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSW---------  147 (254)
T ss_dssp             CCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCS---------
T ss_pred             CccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCc---------
Confidence            68999999997532     2233456889999999999999988    4445 799999998775544332         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHhc-CCcEEEEecCceeCCCCCCCCc------chHHHHHHHHcCCCCCCCC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH-GVDVVAIHPATCLGPLMQPYLN------ASCAVLQQLLQGSKDTQEY  223 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-~i~~~ivrp~~v~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~  223 (307)
                                 ..|+.+|...+.+.+.++.+. ++++++++||.|.++.......      .............      
T Consensus       148 -----------~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~------  210 (254)
T 3kzv_A          148 -----------GAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLK------  210 (254)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHH------
T ss_pred             -----------chHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHH------
Confidence                       579999999999999988775 8999999999999987644311      0122222222211      


Q ss_pred             cccCcccHHHHHHHHHHhhcCCC---CCceEEecC
Q 021819          224 HWLGAVPVKDVAKAQVLLFESPA---ASGRYLCTN  255 (307)
Q Consensus       224 ~~~~~i~~~dva~~~~~~~~~~~---~~g~~~~~~  255 (307)
                      ....+.+++|+|+++++++....   ..|.++..+
T Consensus       211 ~~~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vd  245 (254)
T 3kzv_A          211 ENNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYN  245 (254)
T ss_dssp             TTC----CHHHHHHHHHHHHHCCCGGGTTCEEETT
T ss_pred             hcCCcCCcccHHHHHHHHHhhcccCCCCccEEEec
Confidence            13457899999999999987653   457655443

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.94  E-value=2.7e-26  Score=195.74  Aligned_cols=224  Identities=17%  Similarity=0.117  Sum_probs=159.0

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC-Cccc-ccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHL-FALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~-~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      +++|+++||||+|+||+++++.|+++|+ +|++++|+... .+.+ ..+..... ++.++.+|++|.+++.++++     
T Consensus        27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~  104 (283)
T 1g0o_A           27 LEGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGS-DAACVKANVGVVEDIVRMFEEAVKI  104 (283)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhCC-CeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999 89999887543 1111 11111111 68899999999998887765     


Q ss_pred             --CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                        ++|+||||||.....    ...+++...+++|+.++.++++++.+.  +.++||++||..+..+...           
T Consensus       105 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------  173 (283)
T 1g0o_A          105 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVP-----------  173 (283)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCS-----------
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCC-----------
Confidence              689999999976432    233456889999999999999999876  5679999999766433221           


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCC--------CcchHHHHHHHHc--CCC
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY--------LNASCAVLQQLLQ--GSK  218 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~--------~~~~~~~~~~~~~--~~~  218 (307)
                              ....|+.+|...+.+.+.++.+   .|+++++++||.|.++.....        ..........+..  ..+
T Consensus       174 --------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  245 (283)
T 1g0o_A          174 --------KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSP  245 (283)
T ss_dssp             --------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCT
T ss_pred             --------CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCC
Confidence                    0157999999999999888765   489999999999988642110        0001122222222  211


Q ss_pred             CCCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          219 DTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       219 ~~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                            ...+.+++|+|+++++++...  ...|..+..+++
T Consensus       246 ------~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG  280 (283)
T 1g0o_A          246 ------LRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGG  280 (283)
T ss_dssp             ------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ------CCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCC
Confidence                  235789999999999998753  345665544443

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.94  E-value=4.2e-27  Score=204.31  Aligned_cols=222  Identities=11%  Similarity=0.078  Sum_probs=159.9

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC-CC-----CcccccCCCCCCCceEEEEcccCChhHHHHHhcCcc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SD-----SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCK   82 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~-~~-----~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d   82 (307)
                      ||+|+||||||+||++|++.|+++|+ +|++++|++ ..     .+.+..+..   .+++++.+|++|++++.++++++|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~l~~~~~---~~v~~v~~D~~d~~~l~~a~~~~d   79 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSH-PTFIYARPLTPDSTPSSVQLREEFRS---MGVTIIEGEMEEHEKMVSVLKQVD   79 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTC-CEEEEECCCCTTCCHHHHHHHHHHHH---TTCEEEECCTTCHHHHHHHHTTCS
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCC-cEEEEECCcccccChHHHHHHHHhhc---CCcEEEEecCCCHHHHHHHHcCCC
Confidence            56899999999999999999999998 899999976 21     111111100   168999999999999999999999


Q ss_pred             EEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcC-CcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccC
Q 021819           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK  161 (307)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  161 (307)
                      +|||+++...               +.++.+++++|++.| +++||+ |+ .   +.      ..+|..+..+..     
T Consensus        80 ~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~-~---g~------~~~~~~~~~p~~-----  128 (321)
T 3c1o_A           80 IVISALPFPM---------------ISSQIHIINAIKAAGNIKRFLP-SD-F---GC------EEDRIKPLPPFE-----  128 (321)
T ss_dssp             EEEECCCGGG---------------SGGGHHHHHHHHHHCCCCEEEC-SC-C---SS------CGGGCCCCHHHH-----
T ss_pred             EEEECCCccc---------------hhhHHHHHHHHHHhCCccEEec-cc-c---cc------CccccccCCCcc-----
Confidence            9999998631               456789999999998 999983 43 1   11      112333322311     


Q ss_pred             ccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHH---HHcCCCCC-C--CCcccCcccHHHHH
Q 021819          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQ---LLQGSKDT-Q--EYHWLGAVPVKDVA  235 (307)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~---~~~~~~~~-~--~~~~~~~i~~~dva  235 (307)
                      ..| .+|..+|.+++    +.+++++++||+.++++..       ..+...   ...+.... .  ++..+++++++|+|
T Consensus       129 ~~y-~sK~~~e~~~~----~~~~~~~~lrp~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (321)
T 3c1o_A          129 SVL-EKKRIIRRAIE----AAALPYTYVSANCFGAYFV-------NYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIA  196 (321)
T ss_dssp             HHH-HHHHHHHHHHH----HHTCCBEEEECCEEHHHHH-------HHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHH
T ss_pred             hHH-HHHHHHHHHHH----HcCCCeEEEEeceeccccc-------cccccccccccccCceEEecCCCcceeEeeHHHHH
Confidence            469 99999998886    4689999999998877421       111110   01111111 1  34678999999999


Q ss_pred             HHHHHhhcCCCCCc-eEEec--CCcccHHHHHHHHHHhCCCCCCCc
Q 021819          236 KAQVLLFESPAASG-RYLCT--NGIYQFGDFAERVSKLFPEFPVHR  278 (307)
Q Consensus       236 ~~~~~~~~~~~~~g-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  278 (307)
                      ++++.++.++...| .|++.  ++.+++.|+++.+.+.+ +.+++.
T Consensus       197 ~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~-g~~~~~  241 (321)
T 3c1o_A          197 KYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKS-GLSFKK  241 (321)
T ss_dssp             HHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHH-TSCCCE
T ss_pred             HHHHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHc-CCccee
Confidence            99999998876545 45554  46799999999999999 555543

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.94  E-value=6e-26  Score=188.33  Aligned_cols=209  Identities=16%  Similarity=0.092  Sum_probs=156.1

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +||+++||||+|+||++++++|+++|+ +|++.+|+.+..+.... +......++.++++|++|++++.++++       
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFG   79 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            368999999999999999999999999 89999997654433221 110011278899999999999998886       


Q ss_pred             CccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHHHhc---CCcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           80 GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      ++|++|||||......    ..+++...+++|+.++.++++++...   +.+++|++||..+..+.+..           
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~-----------  148 (235)
T 3l77_A           80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYG-----------  148 (235)
T ss_dssp             SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTTC-----------
T ss_pred             CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCCc-----------
Confidence            6899999999865432    34456889999999999999998542   23578888887665443332           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHh-cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccH
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK-HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPV  231 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  231 (307)
                               ..|+.+|.+.+.+.+.+..+ .++++++++||.|.++........                 .....++++
T Consensus       149 ---------~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~~~-----------------~~~~~~~~p  202 (235)
T 3l77_A          149 ---------GGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKPGK-----------------PKEKGYLKP  202 (235)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCSCC-----------------CGGGTCBCH
T ss_pred             ---------chHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccCCc-----------------ccccCCCCH
Confidence                     56999999999999887544 489999999999988764332110                 012357899


Q ss_pred             HHHHHHHHHhhcCCCCC--ceEEec
Q 021819          232 KDVAKAQVLLFESPAAS--GRYLCT  254 (307)
Q Consensus       232 ~dva~~~~~~~~~~~~~--g~~~~~  254 (307)
                      +|+|+++++++..+...  |..++.
T Consensus       203 ~dva~~v~~l~~~~~~~~~~~~~~~  227 (235)
T 3l77_A          203 DEIAEAVRCLLKLPKDVRVEELMLR  227 (235)
T ss_dssp             HHHHHHHHHHHTSCTTCCCCEEEEC
T ss_pred             HHHHHHHHHHHcCCCCCccceEEEe
Confidence            99999999999877643  444443

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.94  E-value=3.7e-27  Score=202.01  Aligned_cols=223  Identities=17%  Similarity=0.130  Sum_probs=157.9

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC--CcccccCCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++.+|+...  .+.+.........++.++++|++|+++++++++    
T Consensus        46 ~l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  124 (294)
T 3r3s_A           46 RLKDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE  124 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            45678999999999999999999999999 88888875321  112211111111278899999999998887775    


Q ss_pred             ---CccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHHHhcC--CcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 ---GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKRFG--VRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                         ++|++|||||....     ....+.+.+.+++|+.++.++++++...-  .++||++||..+..+.+..        
T Consensus       125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~--------  196 (294)
T 3r3s_A          125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHL--------  196 (294)
T ss_dssp             HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTTC--------
T ss_pred             HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCCc--------
Confidence               68999999997542     12344568999999999999999997753  2599999998775554332        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                                  ..|+.+|...+.+.+.++.+.   |+++++++||.|+++....... ..........      .....
T Consensus       197 ------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~-~~~~~~~~~~------~~p~~  257 (294)
T 3r3s_A          197 ------------LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQ-TQDKIPQFGQ------QTPMK  257 (294)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTS-CGGGSTTTTT------TSTTS
T ss_pred             ------------hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCC-CHHHHHHHHh------cCCCC
Confidence                        569999999999998887764   8999999999999875211000 0000000000      11234


Q ss_pred             CcccHHHHHHHHHHhhcCC--CCCceEEecCC
Q 021819          227 GAVPVKDVAKAQVLLFESP--AASGRYLCTNG  256 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~  256 (307)
                      .+.+++|+|+++++++...  ...|..+..++
T Consensus       258 r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG  289 (294)
T 3r3s_A          258 RAGQPAELAPVYVYLASQESSYVTAEVHGVCG  289 (294)
T ss_dssp             SCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCcCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence            5789999999999988643  34465443333

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.94  E-value=1.5e-25  Score=187.74  Aligned_cols=218  Identities=16%  Similarity=0.117  Sum_probs=153.7

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      ++++++|+++||||+++||+++++.|+++|+ +|++.+|+..+.  ..        ....+++|++|+++++++++    
T Consensus         6 l~~L~GK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~--~~--------~~~~~~~Dv~~~~~v~~~~~~~~~   74 (261)
T 4h15_A            6 FLNLRGKRALITAGTKGAGAATVSLFLELGA-QVLTTARARPEG--LP--------EELFVEADLTTKEGCAIVAEATRQ   74 (261)
T ss_dssp             CCCCTTCEEEESCCSSHHHHHHHHHHHHTTC-EEEEEESSCCTT--SC--------TTTEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeccCcHHHHHHHHHHHHcCC-EEEEEECCchhC--CC--------cEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4467899999999999999999999999999 899999965432  11        33478899999998887775    


Q ss_pred             ---CccEEEEeccCCCC------CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCccc
Q 021819           80 ---GCKGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVF  146 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~  146 (307)
                         ++|++|||||....      +...+++++.+++|+.++.++.+++    ++++.++||++||+.+..+.+..     
T Consensus        75 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~-----  149 (261)
T 4h15_A           75 RLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPES-----  149 (261)
T ss_dssp             HTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTT-----
T ss_pred             HcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCc-----
Confidence               57999999996532      2234567899999999998888876    44566899999998765543321     


Q ss_pred             ccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCC-----------cchHHHHHH
Q 021819          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL-----------NASCAVLQQ  212 (307)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~-----------~~~~~~~~~  212 (307)
                                    ...|+.+|...+.+.+.++.+   +||++++|.||.|.++......           .........
T Consensus       150 --------------~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (261)
T 4h15_A          150 --------------TTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMD  215 (261)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred             --------------cHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHH
Confidence                          135778887777777766655   5899999999999876421100           000111111


Q ss_pred             HHcCCCCCCCCcccCcccHHHHHHHHHHhhcC--CCCCceEEecCCc
Q 021819          213 LLQGSKDTQEYHWLGAVPVKDVAKAQVLLFES--PAASGRYLCTNGI  257 (307)
Q Consensus       213 ~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~  257 (307)
                      .....      ....+..++|+|+++++++..  ....|..+..|++
T Consensus       216 ~~~~~------PlgR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG  256 (261)
T 4h15_A          216 GLGGI------PLGRPAKPEEVANLIAFLASDRAASITGAEYTIDGG  256 (261)
T ss_dssp             HTTCC------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HhcCC------CCCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCc
Confidence            11111      123477999999999988843  3345766555544

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.94  E-value=1.5e-25  Score=187.24  Aligned_cols=210  Identities=21%  Similarity=0.134  Sum_probs=152.1

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.           +..+.+|++|+++++++++       
T Consensus        13 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~-----------~~~~~~D~~~~~~~~~~~~~~~~~~g   80 (247)
T 1uzm_A           13 FVSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKG-----------LFGVEVDVTDSDAVDRAFTAVEEHQG   80 (247)
T ss_dssp             CCCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTT-----------SEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHH-----------hcCeeccCCCHHHHHHHHHHHHHHcC
Confidence            4578999999999999999999999999 89999997644322           2247899999998888775       


Q ss_pred             CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                      ++|++|||||....    ....+++.+.+++|+.++.++++++.    +.+.++||++||..+.++.+..          
T Consensus        81 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  150 (247)
T 1uzm_A           81 PVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQ----------  150 (247)
T ss_dssp             SCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CC----------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCC----------
Confidence            57999999997643    22334568899999999999999875    3566899999998776554332          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (307)
                                ..|+.+|...+.+.+.++.+   .|+++++++||.|.++.....   ............      ....+
T Consensus       151 ----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~------p~~~~  211 (247)
T 1uzm_A          151 ----------ANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL---DERIQQGALQFI------PAKRV  211 (247)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS---CHHHHHHHGGGC------TTCSC
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhc---CHHHHHHHHhcC------CCCCC
Confidence                      57999999999998887766   489999999999987642211   111112222111      12357


Q ss_pred             ccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          229 VPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       229 i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                      ++++|+|+++++++..+  ...|..+..+++
T Consensus       212 ~~~~dvA~~~~~l~s~~~~~~~G~~i~vdgG  242 (247)
T 1uzm_A          212 GTPAEVAGVVSFLASEDASYISGAVIPVDGG  242 (247)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHcCccccCCcCCEEEECCC
Confidence            89999999999998643  234655444333

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.94  E-value=6.5e-26  Score=196.24  Aligned_cols=228  Identities=17%  Similarity=0.128  Sum_probs=159.3

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC---------ccccc----CCCCCCCceEEEEcccCC
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---------SHLFA----LPGAGDANLRVFEADVLD   70 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~---------~~~~~----~~~~~~~~~~~i~~D~~d   70 (307)
                      |..+++|+++||||+|+||+++++.|+++|+ +|++++|+....         +.+..    +.... .++.++++|++|
T Consensus        41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d  118 (317)
T 3oec_A           41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQG-RRIIARQADVRD  118 (317)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTT-CCEEEEECCTTC
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcC-CeEEEEECCCCC
Confidence            4456788999999999999999999999999 898888753211         11110    11111 278899999999


Q ss_pred             hhHHHHHhc-------CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cC-CcEEEEecCcce
Q 021819           71 SGAVSRAVE-------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISA  134 (307)
Q Consensus        71 ~~~~~~~~~-------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~iSS~~~  134 (307)
                      +++++++++       ++|++|||||.....    ...+++.+.+++|+.++.++++++..    .+ .++||++||..+
T Consensus       119 ~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~  198 (317)
T 3oec_A          119 LASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVG  198 (317)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHh
Confidence            999888876       689999999976542    23345688999999999999998843    33 468999999877


Q ss_pred             eccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCC---------
Q 021819          135 IVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY---------  202 (307)
Q Consensus       135 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~---------  202 (307)
                      ..+.+..                    ..|+.+|...+.+.+.++.+   .|+++++|+||.|.++.....         
T Consensus       199 ~~~~~~~--------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~  258 (317)
T 3oec_A          199 LRGAPGQ--------------------SHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPH  258 (317)
T ss_dssp             SSCCTTB--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTT
T ss_pred             cCCCCCC--------------------cchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhh
Confidence            6554432                    57999999999999988876   489999999999988753210         


Q ss_pred             -CcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          203 -LNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       203 -~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                       ..............    .......+++++|+|+++++++...  ...|..+..+++
T Consensus       259 ~~~~~~~~~~~~~~~----~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG  312 (317)
T 3oec_A          259 LENPTREDAAELFSQ----LTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGG  312 (317)
T ss_dssp             CSSCCHHHHHHHHTT----TCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ccccchhHHHHHHhh----hccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcc
Confidence             00000000111110    0112267889999999999888543  345765444444

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.94  E-value=2.7e-26  Score=194.35  Aligned_cols=224  Identities=16%  Similarity=0.139  Sum_probs=158.6

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC-Cccccc-CCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++.+++... .+.+.. +.... .++.++++|++|++++.++++    
T Consensus        15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~   92 (270)
T 3is3_A           15 RLDGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALG-SDAIAIKADIRQVPEIVKLFDQAVA   92 (270)
T ss_dssp             CCTTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            35678999999999999999999999999 88887664332 222211 11111 278899999999999888876    


Q ss_pred             ---CccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHHHhcC--CcEEEEecCcce-eccCCCCCCcccccC
Q 021819           80 ---GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRFG--VRRVVVTSSISA-IVPNPGWKGKVFDET  149 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~iSS~~~-~~~~~~~~~~~~~E~  149 (307)
                         ++|++|||||......    ..+++++.+++|+.++.++++++...-  .++||++||..+ ..+.+.         
T Consensus        93 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  163 (270)
T 3is3_A           93 HFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPK---------  163 (270)
T ss_dssp             HHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCTT---------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCCC---------
Confidence               6799999999865422    345678899999999999999997653  358999999662 222222         


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCC---------CcchHHHHHHHHcCC
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY---------LNASCAVLQQLLQGS  217 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~---------~~~~~~~~~~~~~~~  217 (307)
                                 ...|+.+|...+.+.+.++.+   .|+++++++||.|.++.....         ...............
T Consensus       164 -----------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (270)
T 3is3_A          164 -----------HSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHAS  232 (270)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHS
T ss_pred             -----------CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcC
Confidence                       157999999999999888876   489999999999998864210         000111122222211


Q ss_pred             CCCCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          218 KDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       218 ~~~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                            ....+.+++|+|+++++++...  ...|..+..+++
T Consensus       233 ------p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  268 (270)
T 3is3_A          233 ------PLHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGG  268 (270)
T ss_dssp             ------TTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ------CCCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCCC
Confidence                  2345778999999999988543  345765444433

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.94  E-value=3.2e-26  Score=193.41  Aligned_cols=221  Identities=20%  Similarity=0.201  Sum_probs=154.1

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCC-CCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP-GSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      .++|+++||||+|+||+++++.|+++|+ +|++..++ ....+.+.........++.++++|++|+++++++++      
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  103 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF  103 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999 78776553 332222221111111268899999999999888876      


Q ss_pred             -CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                       ++|++|||||.....    ...+.+++.+++|+.++.++++++...  ..++||++||..+..+.+..           
T Consensus       104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  172 (267)
T 3u5t_A          104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPSY-----------  172 (267)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTTC-----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCCc-----------
Confidence             689999999986542    223346788999999999999998654  23589999997765554442           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcc
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (307)
                               ..|+.+|...+.+.+.++.+.   |+++++++||.|.++......  ............      ....+.
T Consensus       173 ---------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~------p~~r~~  235 (267)
T 3u5t_A          173 ---------GIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGK--SDEVRDRFAKLA------PLERLG  235 (267)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-------------CHHHHHTSS------TTCSCB
T ss_pred             ---------hHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccC--CHHHHHHHHhcC------CCCCCc
Confidence                     579999999999999988774   899999999999887643210  011112222222      234578


Q ss_pred             cHHHHHHHHHHhhcCCC--CCceEEecCC
Q 021819          230 PVKDVAKAQVLLFESPA--ASGRYLCTNG  256 (307)
Q Consensus       230 ~~~dva~~~~~~~~~~~--~~g~~~~~~~  256 (307)
                      +++|+|+++++++....  ..|..+..++
T Consensus       236 ~pedvA~~v~~L~s~~~~~itG~~i~vdG  264 (267)
T 3u5t_A          236 TPQDIAGAVAFLAGPDGAWVNGQVLRANG  264 (267)
T ss_dssp             CHHHHHHHHHHHHSTTTTTCCSEEEEESS
T ss_pred             CHHHHHHHHHHHhCccccCccCCEEEeCC
Confidence            99999999999886543  3576554443

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.94  E-value=1.9e-26  Score=196.08  Aligned_cols=230  Identities=17%  Similarity=0.127  Sum_probs=160.3

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCC----------CCcccc---cCCCCCCCceEEEEcccCChh
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS----------DSSHLF---ALPGAGDANLRVFEADVLDSG   72 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~----------~~~~~~---~~~~~~~~~~~~i~~D~~d~~   72 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++++|+..          ..+.+.   ........++.++.+|++|++
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFD   86 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence            46789999999999999999999999999 8999888422          111111   100001127889999999999


Q ss_pred             HHHHHhc-------CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHH----hcC-CcEEEEecCcceec
Q 021819           73 AVSRAVE-------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFG-VRRVVVTSSISAIV  136 (307)
Q Consensus        73 ~~~~~~~-------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~~v~iSS~~~~~  136 (307)
                      +++++++       ++|++|||||.....    ...+++++.+++|+.++.++++++.    +.+ .++||++||..+..
T Consensus        87 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~  166 (277)
T 3tsc_A           87 RLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK  166 (277)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCC
Confidence            9888875       589999999986542    2344568899999999999999864    333 46899999987755


Q ss_pred             cCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHH
Q 021819          137 PNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQL  213 (307)
Q Consensus       137 ~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~  213 (307)
                      +.+..                    ..|+.+|...+.+.+.++.+.   |+++++++||.|.++.....  .........
T Consensus       167 ~~~~~--------------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~  224 (277)
T 3tsc_A          167 MQPFM--------------------IHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGD--MVTAVGQAM  224 (277)
T ss_dssp             CCSSC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHH--HHHHHHHHH
T ss_pred             CCCCc--------------------hhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccch--hhhhhhhcc
Confidence            54432                    569999999999998887764   89999999999988764321  011111111


Q ss_pred             HcCCC---CCCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCcc
Q 021819          214 LQGSK---DTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIY  258 (307)
Q Consensus       214 ~~~~~---~~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~  258 (307)
                      .....   .........+.+++|+|+++++++...  ...|..+..+++.
T Consensus       225 ~~~~~~~~~~~~~~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  274 (277)
T 3tsc_A          225 ETNPQLSHVLTPFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGS  274 (277)
T ss_dssp             HTCGGGTTTTCCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cccHHHHHHhhhccCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence            11111   001112235789999999999998654  3457655444443

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.94  E-value=6.2e-26  Score=188.75  Aligned_cols=214  Identities=15%  Similarity=0.161  Sum_probs=153.4

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------Cc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~~   81 (307)
                      +|+++||||+|+||+++++.|+++|+ +|++++|+.+.  ....+      ++..+++|++| +++.++++       ++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~-~V~~~~r~~~~--~~~~~------~~~~~~~D~~~-~~~~~~~~~~~~~~g~i   71 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGY-RVAIASRNPEE--AAQSL------GAVPLPTDLEK-DDPKGLVKRALEALGGL   71 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHH--HHHHH------TCEEEECCTTT-SCHHHHHHHHHHHHTSC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHH--HHHhh------CcEEEecCCch-HHHHHHHHHHHHHcCCC
Confidence            47999999999999999999999999 89999997644  11112      36788999999 76666554       78


Q ss_pred             cEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccCCCCc
Q 021819           82 KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (307)
Q Consensus        82 d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~  153 (307)
                      |++|||||.....    ...+++.+.+++|+.++.++++++.    +.+.++||++||..+..+...             
T Consensus        72 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------  138 (239)
T 2ekp_A           72 HVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGP-------------  138 (239)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCC-------------
Confidence            9999999976432    2234568899999999999998883    456789999999776443210             


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCccc
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  230 (307)
                           .....|+.+|...+.+.+.++.+.   |++++++|||.+.++...... .............+      ...+.+
T Consensus       139 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~p------~~~~~~  206 (239)
T 2ekp_A          139 -----VPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLR-QNPELYEPITARIP------MGRWAR  206 (239)
T ss_dssp             -----SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH-TCHHHHHHHHTTCT------TSSCBC
T ss_pred             -----CCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccc-cCHHHHHHHHhcCC------CCCCcC
Confidence                 011579999999999998887664   899999999999887532110 00122222222211      235789


Q ss_pred             HHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          231 VKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       231 ~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                      ++|+|+++++++..+  ...|.++..+++
T Consensus       207 ~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  235 (239)
T 2ekp_A          207 PEEIARVAAVLCGDEAEYLTGQAVAVDGG  235 (239)
T ss_dssp             HHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHHcCchhcCCCCCEEEECCC
Confidence            999999999988643  245665544443

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.94  E-value=3.4e-26  Score=192.08  Aligned_cols=215  Identities=16%  Similarity=0.098  Sum_probs=153.7

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC--CcccccCCCCCCCceEEEEcccCCh-hHHHHHhc----
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGDANLRVFEADVLDS-GAVSRAVE----   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~i~~D~~d~-~~~~~~~~----   79 (307)
                      +++|+++||||+|+||++++++|+++|++.|++++|+...  .+.+.....  ..++.++.+|++|+ ++++++++    
T Consensus         3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (254)
T 1sby_A            3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINP--KVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCT--TSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCC--CceEEEEEEecCCChHHHHHHHHHHHH
Confidence            4578999999999999999999999999338888887532  112211111  11688999999998 88877765    


Q ss_pred             ---CccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhc----C---CcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 ---GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF----G---VRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~---~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                         ++|+||||||...    .+.+++.+++|+.++.++++++...    +   .++||++||..+..+.+..        
T Consensus        81 ~~g~id~lv~~Ag~~~----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  148 (254)
T 1sby_A           81 QLKTVDILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQV--------  148 (254)
T ss_dssp             HHSCCCEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTS--------
T ss_pred             hcCCCCEEEECCccCC----HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCc--------
Confidence               7899999999753    3567899999999999999998542    1   3689999997765443322        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcch--HHHHHHHHcCCCCCCCCc
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNAS--CAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  224 (307)
                                  ..|+.+|...+.+.+.++.+   .++++++++||.|.++.........  .........         
T Consensus       149 ------------~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------  207 (254)
T 1sby_A          149 ------------PVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLL---------  207 (254)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHT---------
T ss_pred             ------------hHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHh---------
Confidence                        57999999999999887765   6899999999999987532211000  001111111         


Q ss_pred             ccCcccHHHHHHHHHHhhcCCCCCceEEecCC
Q 021819          225 WLGAVPVKDVAKAQVLLFESPAASGRYLCTNG  256 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~~~~g~~~~~~~  256 (307)
                      ...+.+++|+|++++++++....+..|++.++
T Consensus       208 ~~~~~~~~dvA~~i~~~~~~~~~G~~~~v~gG  239 (254)
T 1sby_A          208 SHPTQTSEQCGQNFVKAIEANKNGAIWKLDLG  239 (254)
T ss_dssp             TSCCEEHHHHHHHHHHHHHHCCTTCEEEEETT
T ss_pred             cCCCCCHHHHHHHHHHHHHcCCCCCEEEEeCC
Confidence            12345899999999999874433334555543

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.94  E-value=9.9e-27  Score=200.72  Aligned_cols=225  Identities=15%  Similarity=0.209  Sum_probs=159.9

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC---cc---cccCCCCCCCceEEEEcccCChhHHHHHhcCcc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS---SH---LFALPGAGDANLRVFEADVLDSGAVSRAVEGCK   82 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~---~~---~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d   82 (307)
                      ||+|+||||||+||++|++.|+++|+ +|++++|+....   ..   +..+..   .+++++.+|++|++++.++++++|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~~~~~l~~---~~v~~v~~D~~d~~~l~~~~~~~d   79 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGH-PTFLLVRESTASSNSEKAQLLESFKA---SGANIVHGSIDDHASLVEAVKNVD   79 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCCCTTTTHHHHHHHHHHHT---TTCEEECCCTTCHHHHHHHHHTCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCC-CEEEEECCcccccCHHHHHHHHHHHh---CCCEEEEeccCCHHHHHHHHcCCC
Confidence            56899999999999999999999998 899999975432   11   111111   178999999999999999999999


Q ss_pred             EEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcC-CcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccC
Q 021819           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK  161 (307)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  161 (307)
                      +|||+++...               +.++.+++++|++.| +++||+ |+.+.   .       .+|..+..|..     
T Consensus        80 ~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~~g~---~-------~~~~~~~~p~~-----  128 (308)
T 1qyc_A           80 VVISTVGSLQ---------------IESQVNIIKAIKEVGTVKRFFP-SEFGN---D-------VDNVHAVEPAK-----  128 (308)
T ss_dssp             EEEECCCGGG---------------SGGGHHHHHHHHHHCCCSEEEC-SCCSS---C-------TTSCCCCTTHH-----
T ss_pred             EEEECCcchh---------------hhhHHHHHHHHHhcCCCceEee-ccccc---C-------ccccccCCcch-----
Confidence            9999998531               345789999999998 999984 54221   1       12222222211     


Q ss_pred             ccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCC---CCCcccCcccHHHHHHHH
Q 021819          162 KWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT---QEYHWLGAVPVKDVAKAQ  238 (307)
Q Consensus       162 ~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~dva~~~  238 (307)
                      ..| .+|..+|.+++    +.+++++++||+.++++.........    .....+....   .++..+++++++|+|+++
T Consensus       129 ~~y-~sK~~~e~~~~----~~~~~~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (308)
T 1qyc_A          129 SVF-EVKAKVRRAIE----AEGIPYTYVSSNCFAGYFLRSLAQAG----LTAPPRDKVVILGDGNARVVFVKEEDIGTFT  199 (308)
T ss_dssp             HHH-HHHHHHHHHHH----HHTCCBEEEECCEEHHHHTTTTTCTT----CSSCCSSEEEEETTSCCEEEEECHHHHHHHH
T ss_pred             hHH-HHHHHHHHHHH----hcCCCeEEEEeceecccccccccccc----ccCCCCCceEEecCCCceEEEecHHHHHHHH
Confidence            468 99999998886    46899999999998875432211000    0000111111   134678999999999999


Q ss_pred             HHhhcCCCCCc-eEEec--CCcccHHHHHHHHHHhCCCCCCCc
Q 021819          239 VLLFESPAASG-RYLCT--NGIYQFGDFAERVSKLFPEFPVHR  278 (307)
Q Consensus       239 ~~~~~~~~~~g-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  278 (307)
                      +.+++++...+ .|++.  ++.+|+.|+++.+.+.+ +.+++.
T Consensus       200 ~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~-g~~~~~  241 (308)
T 1qyc_A          200 IKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKI-DKTLEK  241 (308)
T ss_dssp             HTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHT-TSCCEE
T ss_pred             HHHHhCccccCeEEEEeCCCCccCHHHHHHHHHHHh-CCCCce
Confidence            99998765444 45543  35799999999999999 665543

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.94  E-value=2.3e-26  Score=190.24  Aligned_cols=198  Identities=16%  Similarity=0.070  Sum_probs=146.7

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCc----cEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC----KGV   84 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~----d~v   84 (307)
                      ||+++||||+|+||+++++.|+++|+ +|++.+|+.+..+.+.....   .++.++.+|++|.++++++++.+    |+|
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~d~l   76 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGK-ATYLTGRSESKLSTVTNCLS---NNVGYRARDLASHQEVEQLFEQLDSIPSTV   76 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTCS---SCCCEEECCTTCHHHHHHHHHSCSSCCSEE
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHh---hccCeEeecCCCHHHHHHHHHHHhhcCCEE
Confidence            56899999999999999999999999 89999997665544333221   16789999999999999998765    999


Q ss_pred             EEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc---CCcEEEEecCcceeccCCCCCCcccccCCCCchhhh
Q 021819           85 FHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC  157 (307)
Q Consensus        85 i~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~  157 (307)
                      |||||.....    ...+++.+.+++|+.++.++++++...   ...++|++||..+..+.+..                
T Consensus        77 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~----------------  140 (230)
T 3guy_A           77 VHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQE----------------  140 (230)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTTC----------------
T ss_pred             EEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCCC----------------
Confidence            9999976532    233456789999999999999988553   12389999997765544332                


Q ss_pred             cccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHH
Q 021819          158 KSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDV  234 (307)
Q Consensus       158 ~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dv  234 (307)
                          ..|+.+|...+.+.+.++.+.   |+++++++||.|.++.......           ..      ....+++++|+
T Consensus       141 ----~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-----------~~------~~~~~~~~~dv  199 (230)
T 3guy_A          141 ----STYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGK-----------SL------DTSSFMSAEDA  199 (230)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC---------------------------------CCCHHHH
T ss_pred             ----chhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcCC-----------CC------CcccCCCHHHH
Confidence                579999999999999888775   8999999999998875332110           00      13457899999


Q ss_pred             HHHHHHhhcCCCC
Q 021819          235 AKAQVLLFESPAA  247 (307)
Q Consensus       235 a~~~~~~~~~~~~  247 (307)
                      |+++++++.++..
T Consensus       200 A~~i~~l~~~~~~  212 (230)
T 3guy_A          200 ALMIHGALANIGN  212 (230)
T ss_dssp             HHHHHHHCCEETT
T ss_pred             HHHHHHHHhCcCC
Confidence            9999999876554

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.94  E-value=1.4e-26  Score=199.53  Aligned_cols=222  Identities=13%  Similarity=0.047  Sum_probs=153.6

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-C----CCCCCCceEEEEcccCChhHHHHHhc-
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-L----PGAGDANLRVFEADVLDSGAVSRAVE-   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~----~~~~~~~~~~i~~D~~d~~~~~~~~~-   79 (307)
                      .+++|+|+||||+|+||++++++|+++|+ +|++++|+.+..+.+.. +    ......++.++.+|++|++++.++++ 
T Consensus        15 ~l~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   93 (303)
T 1yxm_A           15 LLQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   93 (303)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence            34578999999999999999999999999 89999997544322211 1    00011278999999999999888876 


Q ss_pred             ------CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcc
Q 021819           80 ------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKV  145 (307)
Q Consensus        80 ------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~  145 (307)
                            ++|+||||||.....    ...+++...+++|+.++.++++++..    .+.++||++||.. ..+.+..    
T Consensus        94 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~----  168 (303)
T 1yxm_A           94 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLA----  168 (303)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTC----
T ss_pred             HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCcc----
Confidence                  489999999965421    22334578899999999999999865    2347899999966 4333221    


Q ss_pred             cccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCc-chHHHHHHHHcCCCCCC
Q 021819          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLN-ASCAVLQQLLQGSKDTQ  221 (307)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~  221 (307)
                                      ..|+.+|...+.+.+.++++.   |++++++|||.|+|+....... .............    
T Consensus       169 ----------------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~----  228 (303)
T 1yxm_A          169 ----------------VHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKI----  228 (303)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGS----
T ss_pred             ----------------hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcC----
Confidence                            458888888887777776653   8999999999999984211100 0001111111111    


Q ss_pred             CCcccCcccHHHHHHHHHHhhcCCC--CCceE-EecC
Q 021819          222 EYHWLGAVPVKDVAKAQVLLFESPA--ASGRY-LCTN  255 (307)
Q Consensus       222 ~~~~~~~i~~~dva~~~~~~~~~~~--~~g~~-~~~~  255 (307)
                        ....+++++|+|+++++++....  ..|.+ ++.+
T Consensus       229 --p~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~g  263 (303)
T 1yxm_A          229 --PAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDG  263 (303)
T ss_dssp             --TTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             --cccCCCCHHHHHHHHHHHhCcccccCCCcEEEECC
Confidence              12357899999999999986532  44654 4443

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.94  E-value=1.3e-26  Score=196.05  Aligned_cols=229  Identities=16%  Similarity=0.112  Sum_probs=155.9

Q ss_pred             CccccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCC-CCCceEEEEcccCChhHHHHHh
Q 021819            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGA-GDANLRVFEADVLDSGAVSRAV   78 (307)
Q Consensus         1 m~~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~-~~~~~~~i~~D~~d~~~~~~~~   78 (307)
                      |..|  +++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+... .+... ...++.++.+|++|++++.+++
T Consensus         1 M~~m--~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~   77 (267)
T 2gdz_A            1 MAHM--VNGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTF   77 (267)
T ss_dssp             -CCC--CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHH
T ss_pred             CCcc--cCCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHH
Confidence            4444  3468999999999999999999999999 8999999754432211 11111 0126889999999999988877


Q ss_pred             c-------CccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHH----HHhcC---CcEEEEecCcceeccCCCCCCc
Q 021819           79 E-------GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA----AKRFG---VRRVVVTSSISAIVPNPGWKGK  144 (307)
Q Consensus        79 ~-------~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~----~~~~~---~~~~v~iSS~~~~~~~~~~~~~  144 (307)
                      +       ++|+||||||...    .+++.+.+++|+.++.++.++    +++.+   .++||++||..+..+.+..   
T Consensus        78 ~~~~~~~g~id~lv~~Ag~~~----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---  150 (267)
T 2gdz_A           78 RKVVDHFGRLDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQ---  150 (267)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTC---
T ss_pred             HHHHHHcCCCCEEEECCCCCC----hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCC---
Confidence            6       4799999999754    356788999999876665554    44432   5799999997765443322   


Q ss_pred             ccccCCCCchhhhcccCccHHHHHHHHHHHHHHHH-----HhcCCcEEEEecCceeCCCCCCCCcch-H----HHHHHHH
Q 021819          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFA-----EKHGVDVVAIHPATCLGPLMQPYLNAS-C----AVLQQLL  214 (307)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~-----~~~~i~~~ivrp~~v~g~~~~~~~~~~-~----~~~~~~~  214 (307)
                                       ..|+.+|...+.+.+.++     ...++++++++||.|.++......... .    .+.....
T Consensus       151 -----------------~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  213 (267)
T 2gdz_A          151 -----------------PVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIK  213 (267)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHH
T ss_pred             -----------------chHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHH
Confidence                             469999999998887642     235899999999999886422110000 0    0000000


Q ss_pred             cCCCCCCCCcccCcccHHHHHHHHHHhhcCCCCCce-EEec-CCcccHHH
Q 021819          215 QGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGR-YLCT-NGIYQFGD  262 (307)
Q Consensus       215 ~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~~~g~-~~~~-~~~~~~~~  262 (307)
                      .      +.....+++++|+|+++++++..+...|. +++. +++.++.|
T Consensus       214 ~------~~~~~~~~~~~dvA~~v~~l~s~~~~~G~~~~v~gg~~~~~~~  257 (267)
T 2gdz_A          214 D------MIKYYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQD  257 (267)
T ss_dssp             H------HHHHHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred             H------HhccccCCCHHHHHHHHHHHhcCcCCCCcEEEecCCCcccccC
Confidence            0      00123478999999999999987666664 5554 34555443

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.94  E-value=1.2e-25  Score=189.98  Aligned_cols=206  Identities=17%  Similarity=0.150  Sum_probs=156.6

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCC---CCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNN---YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g---~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      .++|+|+||||+|+||++++++|+++|   + +|++++|+....+.+..+..... ++.++.+|++|.++++++++    
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~-~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~   96 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHS-NIHILEIDLRNFDAYDKLVADIEG   96 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCT-TEEEEECCTTCGGGHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCc-EEEEEecChhhhHHHHHhhccCC-ceEEEEecCCChHHHHHHHHHHHH
Confidence            567899999999999999999999999   7 99999998766544333211112 68899999999999888876    


Q ss_pred             -----CccEEEEeccCCC-C----CCCCChhhhhhhhhHHHHHHHHHHHHhc----------C-----CcEEEEecCcce
Q 021819           80 -----GCKGVFHVASPCT-L----EDPVDPEKELILPAVQGTLNVLEAAKRF----------G-----VRRVVVTSSISA  134 (307)
Q Consensus        80 -----~~d~vi~~a~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~-----~~~~v~iSS~~~  134 (307)
                           ++|+||||||... .    ....+.+...+++|+.++.++++++...          +     .++||++||..+
T Consensus        97 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~  176 (267)
T 1sny_A           97 VTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG  176 (267)
T ss_dssp             HHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGG
T ss_pred             hcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccc
Confidence                 7999999999765 1    1223456789999999999999988543          2     478999999776


Q ss_pred             eccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHH
Q 021819          135 IVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQ  211 (307)
Q Consensus       135 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~  211 (307)
                      ..+....                 .....|+.+|...+.+.+.++.+   .+++++++|||.|.++....          
T Consensus       177 ~~~~~~~-----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----------  229 (267)
T 1sny_A          177 SIQGNTD-----------------GGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS----------  229 (267)
T ss_dssp             CSTTCCS-----------------CCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT----------
T ss_pred             cccCCCC-----------------CCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC----------
Confidence            4432210                 01146999999999999888776   58999999999998876321          


Q ss_pred             HHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCCC--CCceEEecC
Q 021819          212 QLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTN  255 (307)
Q Consensus       212 ~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~--~~g~~~~~~  255 (307)
                                    ..+++++|+|+.++.++....  ..|.|+..+
T Consensus       230 --------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~  261 (267)
T 1sny_A          230 --------------SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYD  261 (267)
T ss_dssp             --------------TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTT
T ss_pred             --------------CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccC
Confidence                          124789999999999997543  346665433

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.94  E-value=9.8e-26  Score=195.91  Aligned_cols=219  Identities=16%  Similarity=0.128  Sum_probs=159.3

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEe-CCCCCCccccc-CC-CCCCCceEEEEcccCChh-----------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATV-FPGSDSSHLFA-LP-GAGDANLRVFEADVLDSG-----------   72 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~-r~~~~~~~~~~-~~-~~~~~~~~~i~~D~~d~~-----------   72 (307)
                      +++|+++||||+|+||+++++.|+++|+ +|++++ |+.+..+.+.. +. ... .++.++.+|++|++           
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~-~Vv~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~~~  121 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNVATAPVSGADGSA  121 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSCBCC-------C
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcC-CeEEEEEeeCCCchhcccccccccc
Confidence            5578999999999999999999999999 899988 76544332221 10 011 16889999999998           


Q ss_pred             ------HHHHHhc-------CccEEEEeccCCCCCC----C--------------CChhhhhhhhhHHHHHHHHHHHH--
Q 021819           73 ------AVSRAVE-------GCKGVFHVASPCTLED----P--------------VDPEKELILPAVQGTLNVLEAAK--  119 (307)
Q Consensus        73 ------~~~~~~~-------~~d~vi~~a~~~~~~~----~--------------~~~~~~~~~~n~~~~~~l~~~~~--  119 (307)
                            +++++++       .+|+||||||......    .              .+.+...+++|+.++.++++++.  
T Consensus       122 ~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  201 (328)
T 2qhx_A          122 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  201 (328)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                  8887776       7899999999764321    1              33456889999999999999875  


Q ss_pred             --hcC------CcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEE
Q 021819          120 --RFG------VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVA  188 (307)
Q Consensus       120 --~~~------~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~i  188 (307)
                        +.+      .++||++||..+..+.+..                    ..|+.+|...+.+.+.++.+.   |+++++
T Consensus       202 m~~~~~~~~~~~g~IV~isS~~~~~~~~~~--------------------~~Y~asKaal~~l~~~la~el~~~gIrvn~  261 (328)
T 2qhx_A          202 VAGTPAKHRGTNYSIINMVDAMTNQPLLGY--------------------TIYTMAKGALEGLTRSAALELAPLQIRVNG  261 (328)
T ss_dssp             HHHSCGGGSCSCEEEEEECCTTTTSCCTTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             HHhcCCcCCCCCcEEEEECchhhccCCCCc--------------------HHHHHHHHHHHHHHHHHHHHHhhcCcEEEE
Confidence              334      5799999997765443332                    579999999999998887664   899999


Q ss_pred             EecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc-CcccHHHHHHHHHHhhcC--CCCCceEEecCCcc
Q 021819          189 IHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL-GAVPVKDVAKAQVLLFES--PAASGRYLCTNGIY  258 (307)
Q Consensus       189 vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~~  258 (307)
                      |+||.|.++. ...    ...........+      .. .+.+++|+|+++++++..  ....|.++..++++
T Consensus       262 v~PG~v~T~~-~~~----~~~~~~~~~~~p------~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~  323 (328)
T 2qhx_A          262 VGPGLSVLVD-DMP----PAVWEGHRSKVP------LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY  323 (328)
T ss_dssp             EEESSBSCCC-CSC----HHHHHHHHTTCT------TTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             EecCcccCCc-ccc----HHHHHHHHhhCC------CCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence            9999999987 321    233333333222      12 477999999999999864  33457655444443

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.94  E-value=2.4e-26  Score=194.11  Aligned_cols=226  Identities=16%  Similarity=0.177  Sum_probs=159.1

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcc-cccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH-LFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      +++|+|+||||+|+||++++++|+++|+ +|++++|+...... ...+......++.++++|++|+++++++++      
T Consensus        12 ~~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   90 (265)
T 1h5q_A           12 FVNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL   90 (265)
T ss_dssp             CTTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            4578999999999999999999999999 99999996554322 111100001168899999999998888775      


Q ss_pred             -CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc----C-CcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----G-VRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                       .+|+||||||.....    ...+.+...+++|+.++.++++++...    + .++||++||..+..+....       .
T Consensus        91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-------~  163 (265)
T 1h5q_A           91 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS-------L  163 (265)
T ss_dssp             CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE-------T
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccc-------c
Confidence             489999999976532    123456788999999999999988543    3 4789999997664432110       0


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                      .+      ......|+.+|...+.+.+.++++   .+++++++|||.|+++.....   ............+      ..
T Consensus       164 ~~------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~------~~  228 (265)
T 1h5q_A          164 NG------SLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM---DKKIRDHQASNIP------LN  228 (265)
T ss_dssp             TE------ECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS---CHHHHHHHHHTCT------TS
T ss_pred             cc------cccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc---chhHHHHHHhcCc------cc
Confidence            00      111257999999999999888766   389999999999999865432   1222222222222      23


Q ss_pred             CcccHHHHHHHHHHhhcCCC--CCce-EEecC
Q 021819          227 GAVPVKDVAKAQVLLFESPA--ASGR-YLCTN  255 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~~--~~g~-~~~~~  255 (307)
                      .+++++|+|+++++++..+.  ..|. +++.+
T Consensus       229 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  260 (265)
T 1h5q_A          229 RFAQPEEMTGQAILLLSDHATYMTGGEYFIDG  260 (265)
T ss_dssp             SCBCGGGGHHHHHHHHSGGGTTCCSCEEEECT
T ss_pred             CCCCHHHHHHHHHhhccCchhcCcCcEEEecC
Confidence            57899999999999986542  3454 55544

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.94  E-value=1.4e-26  Score=195.24  Aligned_cols=226  Identities=11%  Similarity=0.069  Sum_probs=156.1

Q ss_pred             ccccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc----cCCCCCCCceEEEEcccCChhHHHHH
Q 021819            2 ASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF----ALPGAGDANLRVFEADVLDSGAVSRA   77 (307)
Q Consensus         2 ~~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~i~~D~~d~~~~~~~   77 (307)
                      +.|+++++|+++||||+|+||+++++.|+++|+ +|++.+|.....+.+.    .+...+ .++.++++|++|+++++++
T Consensus         4 ~~~~~l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~   81 (262)
T 3ksu_A            4 TKYHDLKNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQG-AKVALYQSDLSNEEEVAKL   81 (262)
T ss_dssp             CCCSCCTTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTT-CEEEEEECCCCSHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHH
Confidence            345667789999999999999999999999999 8998887543322221    111112 2788999999999999888


Q ss_pred             hc-------CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCc
Q 021819           78 VE-------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGK  144 (307)
Q Consensus        78 ~~-------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~  144 (307)
                      ++       ++|++|||||.....    ...+.+.+.+++|+.++.++++++...  +.+++|++||..+..+.+..   
T Consensus        82 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~---  158 (262)
T 3ksu_A           82 FDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFY---  158 (262)
T ss_dssp             HHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCCC---
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCCC---
Confidence            76       689999999976542    233456788999999999999999775  34689999997765544332   


Q ss_pred             ccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC
Q 021819          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ  221 (307)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  221 (307)
                                       ..|+.+|...+.+.+.++.+.   |+++++++||.|.++.......  ..........     
T Consensus       159 -----------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~-----  214 (262)
T 3ksu_A          159 -----------------STYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQET--KESTAFHKSQ-----  214 (262)
T ss_dssp             -----------------CC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC------------------
T ss_pred             -----------------chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCc--hHHHHHHHhc-----
Confidence                             569999999999888888774   8999999999997764221100  0000001111     


Q ss_pred             CCcccCcccHHHHHHHHHHhhcC-CCCCceEEecCCc
Q 021819          222 EYHWLGAVPVKDVAKAQVLLFES-PAASGRYLCTNGI  257 (307)
Q Consensus       222 ~~~~~~~i~~~dva~~~~~~~~~-~~~~g~~~~~~~~  257 (307)
                       .....+.+++|+|+++++++.. ....|..+..|++
T Consensus       215 -~~~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGg  250 (262)
T 3ksu_A          215 -AMGNQLTKIEDIAPIIKFLTTDGWWINGQTIFANGG  250 (262)
T ss_dssp             --CCCCSCCGGGTHHHHHHHHTTTTTCCSCEEEESTT
T ss_pred             -CcccCCCCHHHHHHHHHHHcCCCCCccCCEEEECCC
Confidence             1234578999999999999875 2234765544433

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.94  E-value=6.5e-26  Score=191.91  Aligned_cols=220  Identities=18%  Similarity=0.165  Sum_probs=156.5

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC-Ccccc-cCCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      +.++|+++||||+|+||++++++|+++|+ +|++.+++... ..... .+.... .++.++.+|++|.++++++++    
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~   99 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAGM-AVAVSHSERNDHVSTWLMHERDAG-RDFKAYAVDVADFESCERCAEKVLA   99 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEECSCHHHHHHHHHHHHTTT-CCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHHHHHHH
Confidence            34578999999999999999999999999 88888754322 22111 111111 278999999999999888776    


Q ss_pred             ---CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                         ++|+||||||.....    ...+++...+++|+.++.++++++..    .+.++||++||..+..+.+..       
T Consensus       100 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  172 (269)
T 3gk3_A          100 DFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQ-------  172 (269)
T ss_dssp             HHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTB-------
T ss_pred             HcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCc-------
Confidence               789999999976542    23345688999999999999998743    456799999998776554442       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                                   ..|+.+|.+.+.+.+.++.+.   |+++++++||.|.++.......   ..    .. .........
T Consensus       173 -------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~---~~----~~-~~~~~~~~~  231 (269)
T 3gk3_A          173 -------------ANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQ---DV----LE-AKILPQIPV  231 (269)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC---------------CCSGGGCTT
T ss_pred             -------------chHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhch---hH----HH-HHhhhcCCc
Confidence                         579999999999988887663   8999999999999887543211   00    00 000011123


Q ss_pred             cCcccHHHHHHHHHHhhcCCC--CCceEEecC
Q 021819          226 LGAVPVKDVAKAQVLLFESPA--ASGRYLCTN  255 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~~--~~g~~~~~~  255 (307)
                      ..+.+++|+|+++++++....  ..|..+..+
T Consensus       232 ~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vd  263 (269)
T 3gk3_A          232 GRLGRPDEVAALIAFLCSDDAGFVTGADLAIN  263 (269)
T ss_dssp             SSCBCHHHHHHHHHHHTSTTCTTCCSCEEEES
T ss_pred             CCccCHHHHHHHHHHHhCCCcCCeeCcEEEEC
Confidence            457799999999999887643  446544333

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.94  E-value=3.5e-26  Score=194.65  Aligned_cols=216  Identities=16%  Similarity=0.174  Sum_probs=150.4

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCC-CCceEEEEcccCChhHHHHHhc--
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAG-DANLRVFEADVLDSGAVSRAVE--   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~-~~~~~~i~~D~~d~~~~~~~~~--   79 (307)
                      |..+++|+++||||+|+||+++++.|+++|+ +|++++|+....+.+.. +.... ..++.++.+|++|++++.++++  
T Consensus        27 m~~l~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  105 (279)
T 1xg5_A           27 MERWRDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAI  105 (279)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHH
Confidence            3445678999999999999999999999999 89999997544332211 10000 1157889999999999888776  


Q ss_pred             -----CccEEEEeccCCCCCC----CCChhhhhhhhhHHH----HHHHHHHHHhcCC--cEEEEecCcceeccCCCCCCc
Q 021819           80 -----GCKGVFHVASPCTLED----PVDPEKELILPAVQG----TLNVLEAAKRFGV--RRVVVTSSISAIVPNPGWKGK  144 (307)
Q Consensus        80 -----~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~----~~~l~~~~~~~~~--~~~v~iSS~~~~~~~~~~~~~  144 (307)
                           ++|+||||||......    ..+.+...+++|+.+    ++++++.+++.+.  ++||++||..+....+.    
T Consensus       106 ~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~----  181 (279)
T 1xg5_A          106 RSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL----  181 (279)
T ss_dssp             HHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC----
T ss_pred             HHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCC----
Confidence                 7899999999764321    233567899999999    6666667777765  79999999765311111    


Q ss_pred             ccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh-----cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCC
Q 021819          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD  219 (307)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  219 (307)
                               +.     ...|+.+|...+.+.+.++.+     .++++++++||.|.++.................     
T Consensus       182 ---------~~-----~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~-----  242 (279)
T 1xg5_A          182 ---------SV-----THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATY-----  242 (279)
T ss_dssp             ---------GG-----GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHH-----
T ss_pred             ---------CC-----CchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhhhc-----
Confidence                     11     146999999999888877654     479999999999988752110000001111100     


Q ss_pred             CCCCcccCcccHHHHHHHHHHhhcCCCC
Q 021819          220 TQEYHWLGAVPVKDVAKAQVLLFESPAA  247 (307)
Q Consensus       220 ~~~~~~~~~i~~~dva~~~~~~~~~~~~  247 (307)
                          ....+++++|+|+++++++..+..
T Consensus       243 ----~~~~~~~~~dvA~~i~~l~~~~~~  266 (279)
T 1xg5_A          243 ----EQMKCLKPEDVAEAVIYVLSTPAH  266 (279)
T ss_dssp             ----C---CBCHHHHHHHHHHHHHSCTT
T ss_pred             ----ccccCCCHHHHHHHHHHHhcCCcc
Confidence                123478999999999999987553

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.94  E-value=4e-26  Score=189.30  Aligned_cols=197  Identities=16%  Similarity=0.064  Sum_probs=149.2

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------Cc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~~   81 (307)
                      +|+++||||+|+||++++++|+++|+ +|++.+|+.+..+.+.....  . ++.++.+|++|+++++++++       .+
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   78 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLG--N-AVIGIVADLAHHEDVDVAFAAAVEWGGLP   78 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHG--G-GEEEEECCTTSHHHHHHHHHHHHHHHCSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhc--C-CceEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            67999999999999999999999999 89999997655443322111  1 68899999999999888776       57


Q ss_pred             cEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHhc---CCcEEEEecCcceeccCCCCCCcccccCCCCch
Q 021819           82 KGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (307)
Q Consensus        82 d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~  154 (307)
                      |++|||||....    ....+++.+.+++|+.++.++++++...   ..++||++||..+..+.+..             
T Consensus        79 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-------------  145 (235)
T 3l6e_A           79 ELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKANE-------------  145 (235)
T ss_dssp             SEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCSSH-------------
T ss_pred             cEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCCCC-------------
Confidence            999999998643    2234456889999999999999988432   12489999997776554332             


Q ss_pred             hhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccH
Q 021819          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPV  231 (307)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  231 (307)
                             ..|+.+|...+.+.+.++.+   .|+++++++||.|.++.......            .      ....++++
T Consensus       146 -------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~------------~------~~~~~~~p  200 (235)
T 3l6e_A          146 -------SLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH------------V------DPSGFMTP  200 (235)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC-----------------------------CBCH
T ss_pred             -------cHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC------------C------CCcCCCCH
Confidence                   57999999999999988876   48999999999998875332100            0      12257899


Q ss_pred             HHHHHHHHHhhcCCCC
Q 021819          232 KDVAKAQVLLFESPAA  247 (307)
Q Consensus       232 ~dva~~~~~~~~~~~~  247 (307)
                      +|+|+++++++..+..
T Consensus       201 edvA~~v~~l~~~~~~  216 (235)
T 3l6e_A          201 EDAAAYMLDALEARSS  216 (235)
T ss_dssp             HHHHHHHHHHTCCCSS
T ss_pred             HHHHHHHHHHHhCCCC
Confidence            9999999999987654

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.94  E-value=3.1e-26  Score=194.40  Aligned_cols=223  Identities=18%  Similarity=0.117  Sum_probs=157.5

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHH-CCCCeEEEEeCCCCCCcccc-cCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLD-NNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~-~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ++|+|+||||+|+||+++++.|++ .|+ +|++++|+.+..+... .+.... .++.++.+|++|.+++.++++      
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~   80 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEG-LSPRFHQLDIDDLQSIRALRDFLRKEY   80 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTT-CCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcC-CeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence            468999999999999999999999 899 8999999754432221 111111 167899999999999988876      


Q ss_pred             -CccEEEEeccCCCCCCC----CChhhhhhhhhHHHHHHHHHHHHhcC--CcEEEEecCcceeccCCCC--------CCc
Q 021819           80 -GCKGVFHVASPCTLEDP----VDPEKELILPAVQGTLNVLEAAKRFG--VRRVVVTSSISAIVPNPGW--------KGK  144 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~iSS~~~~~~~~~~--------~~~  144 (307)
                       ++|+||||||.......    .+.+...+++|+.++.++++++.+..  .++||++||..++++....        ...
T Consensus        81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~  160 (276)
T 1wma_A           81 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSE  160 (276)
T ss_dssp             SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCS
T ss_pred             CCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcccc
Confidence             78999999997653221    23457889999999999999998762  2589999997765431110        001


Q ss_pred             ccccCCCCch-------------hhhcccCccHHHHHHHHHHHHHHHHHh-------cCCcEEEEecCceeCCCCCCCCc
Q 021819          145 VFDETSWTDL-------------EYCKSRKKWYPVSKTLAEKAAWEFAEK-------HGVDVVAIHPATCLGPLMQPYLN  204 (307)
Q Consensus       145 ~~~E~~~~~~-------------~~~~~~~~~y~~sK~~~e~~~~~~~~~-------~~i~~~ivrp~~v~g~~~~~~~~  204 (307)
                      .++|+++...             .....+...|+.+|.+.+.+.+.++.+       .++++++++||.|.++....   
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~---  237 (276)
T 1wma_A          161 TITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP---  237 (276)
T ss_dssp             SCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT---
T ss_pred             ccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc---
Confidence            1222211000             000011257999999999998877765       48999999999998876331   


Q ss_pred             chHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCCC----CCceEEecCC
Q 021819          205 ASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA----ASGRYLCTNG  256 (307)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~----~~g~~~~~~~  256 (307)
                                           ..+.+++|+|+++++++..+.    ..|.|+..+.
T Consensus       238 ---------------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~~~~  272 (276)
T 1wma_A          238 ---------------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKR  272 (276)
T ss_dssp             ---------------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEETTE
T ss_pred             ---------------------cccCChhHhhhhHhhhhcCcccccccCceEeccCc
Confidence                                 135799999999999997552    3566655443

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.94  E-value=6.9e-26  Score=189.39  Aligned_cols=203  Identities=17%  Similarity=0.159  Sum_probs=145.4

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------Ccc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GCK   82 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~~d   82 (307)
                      |+++||||+|+||+++++.|+++|+ +|++.+|+.+..+.+.....   .++.++.+|++|+++++++++       ++|
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   76 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELG---DNLYIAQLDVRNRAAIEEMLASLPAEWCNID   76 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHC---TTEEEEECCTTCHHHHHHHHHTSCTTTCCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhc---CceEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            5899999999999999999999999 89999997654333222111   168899999999999998876       579


Q ss_pred             EEEEeccCCC-C----CCCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccCCCCc
Q 021819           83 GVFHVASPCT-L----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (307)
Q Consensus        83 ~vi~~a~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~  153 (307)
                      ++|||||... .    ....+++...+++|+.++.++++++.    +.+.++||++||..+..+.+..            
T Consensus        77 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~------------  144 (248)
T 3asu_A           77 ILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGG------------  144 (248)
T ss_dssp             EEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTC------------
T ss_pred             EEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCC------------
Confidence            9999999753 1    22234568899999999999998885    4566899999997765443332            


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCcee-CCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcc
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCL-GPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (307)
                              ..|+.+|...+.+.+.++.+.   |+++++++||.|. ++.................         ....++
T Consensus       145 --------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~---------~~~~~~  207 (248)
T 3asu_A          145 --------NVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTY---------QNTVAL  207 (248)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-------------------------------CCB
T ss_pred             --------chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHHH---------hccCCC
Confidence                    579999999999999887763   8999999999999 5643211000000000000         012346


Q ss_pred             cHHHHHHHHHHhhcCC
Q 021819          230 PVKDVAKAQVLLFESP  245 (307)
Q Consensus       230 ~~~dva~~~~~~~~~~  245 (307)
                      +++|+|+++++++..+
T Consensus       208 ~p~dvA~~v~~l~s~~  223 (248)
T 3asu_A          208 TPEDVSEAVWWVSTLP  223 (248)
T ss_dssp             CHHHHHHHHHHHHHSC
T ss_pred             CHHHHHHHHHHHhcCC
Confidence            9999999999999864

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.94  E-value=2.7e-26  Score=193.52  Aligned_cols=220  Identities=21%  Similarity=0.191  Sum_probs=155.8

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      +++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+.. +...+ .++.++++|++|++++.++++      
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (262)
T 1zem_A            5 FNGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKG-VEARSYVCDVTSEEAVIGTVDSVVRDF   82 (262)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            4578999999999999999999999999 89999997644332221 11111 268899999999998887775      


Q ss_pred             -CccEEEEeccCC-CC----CCCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 -GCKGVFHVASPC-TL----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 -~~d~vi~~a~~~-~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                       ++|+||||||.. ..    ....+++.+.+++|+.++.++++++.+    .+.++||++||..+..+.+..        
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  154 (262)
T 1zem_A           83 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNM--------  154 (262)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTB--------
T ss_pred             CCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCC--------
Confidence             689999999975 22    223345688999999999999998754    356799999997765543332        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCC------------CcchHH-HHHHH
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY------------LNASCA-VLQQL  213 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~------------~~~~~~-~~~~~  213 (307)
                                  ..|+.+|...+.+.+.++.+   .|+++++|+||.|.++.....            ...... .....
T Consensus       155 ------------~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (262)
T 1zem_A          155 ------------AAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQM  222 (262)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHH
T ss_pred             ------------chHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHH
Confidence                        46999999999888877755   489999999999987642110            000011 11212


Q ss_pred             HcCCCCCCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEec
Q 021819          214 LQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCT  254 (307)
Q Consensus       214 ~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~  254 (307)
                      ....+      ...+.+++|+|+++++++...  ...|..+..
T Consensus       223 ~~~~p------~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~v  259 (262)
T 1zem_A          223 IGSVP------MRRYGDINEIPGVVAFLLGDDSSFMTGVNLPI  259 (262)
T ss_dssp             HHTST------TSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HhcCC------CCCCcCHHHHHHHHHHHcCchhcCcCCcEEec
Confidence            22111      234679999999999988643  334654433

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.94  E-value=1.2e-25  Score=192.29  Aligned_cols=220  Identities=16%  Similarity=0.138  Sum_probs=157.4

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC-CCCccccc-CC-CCCCCceEEEEcccCC----hhHHHHHh
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHLFA-LP-GAGDANLRVFEADVLD----SGAVSRAV   78 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~-~~~~~~~~-~~-~~~~~~~~~i~~D~~d----~~~~~~~~   78 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++++|+. +..+.+.. +. ... .++.++++|++|    ++++.+++
T Consensus        20 ~l~~k~~lVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~~~~~v~~~~   97 (288)
T 2x9g_A           20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGY-RVVIHYHNSAEAAVSLADELNKERS-NTAVVCQADLTNSNVLPASCEEII   97 (288)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHHTC-EEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSCSTTHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhhcC-CceEEEEeecCCccCCHHHHHHHH
Confidence            35578999999999999999999999999 899999976 43322211 10 011 168899999999    88888777


Q ss_pred             c-------CccEEEEeccCCCCCCC--------------CChhhhhhhhhHHHHHHHHHHHHhc----C------CcEEE
Q 021819           79 E-------GCKGVFHVASPCTLEDP--------------VDPEKELILPAVQGTLNVLEAAKRF----G------VRRVV  127 (307)
Q Consensus        79 ~-------~~d~vi~~a~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~----~------~~~~v  127 (307)
                      +       ++|+||||||.......              .+.+...+++|+.++.++++++...    +      .++||
T Consensus        98 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv  177 (288)
T 2x9g_A           98 NSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIV  177 (288)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEE
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEE
Confidence            5       68999999997643211              1235678999999999999988543    2      46899


Q ss_pred             EecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCc
Q 021819          128 VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLN  204 (307)
Q Consensus       128 ~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~  204 (307)
                      ++||..+..+.+..                    ..|+.+|...+.+.+.++.+.   |+++++|+||.|+++. . .. 
T Consensus       178 ~isS~~~~~~~~~~--------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~~-  234 (288)
T 2x9g_A          178 NLCDAMVDQPCMAF--------------------SLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-MG-  234 (288)
T ss_dssp             EECCTTTTSCCTTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-SC-
T ss_pred             EEecccccCCCCCC--------------------chHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-cC-
Confidence            99997764443332                    569999999999888877663   8999999999999987 3 11 


Q ss_pred             chHHHHHHHHcCCCCCCCCcccCc-ccHHHHHHHHHHhhcCC--CCCceEEecCCcc
Q 021819          205 ASCAVLQQLLQGSKDTQEYHWLGA-VPVKDVAKAQVLLFESP--AASGRYLCTNGIY  258 (307)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~-i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~  258 (307)
                        ...........+      ...+ .+++|+|+++++++...  ...|.++..++++
T Consensus       235 --~~~~~~~~~~~p------~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~  283 (288)
T 2x9g_A          235 --EEEKDKWRRKVP------LGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGL  283 (288)
T ss_dssp             --HHHHHHHHHTCT------TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             --hHHHHHHHhhCC------CCCCCCCHHHHHHHHHHHhCccccCccCCEEEECcch
Confidence              122233332222      1234 79999999999998643  3457665555443

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.94  E-value=5.4e-26  Score=191.13  Aligned_cols=226  Identities=14%  Similarity=0.072  Sum_probs=146.4

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcC----ccEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG----CKGV   84 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~----~d~v   84 (307)
                      ||+++||||+|+||+++++.|+++|+ +|++++|+.+..+.          .   +++|++|.++++++++.    +|+|
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~----------~---~~~Dl~~~~~v~~~~~~~~~~id~l   66 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDAEVIA----------D---LSTAEGRKQAIADVLAKCSKGMDGL   66 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC----------C---TTSHHHHHHHHHHHHTTCTTCCSEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhhcc----------c---cccCCCCHHHHHHHHHHhCCCCCEE
Confidence            46899999999999999999999999 89999997654321          1   45899999999998865    4999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCC--CCcccccCCCCchh---
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGW--KGKVFDETSWTDLE---  155 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~--~~~~~~E~~~~~~~---  155 (307)
                      |||||....   ...+++.+++|+.++.++++++.    +.+.++||++||..+.......  ....+.+.++....   
T Consensus        67 v~~Ag~~~~---~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (257)
T 1fjh_A           67 VLCAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIV  143 (257)
T ss_dssp             EECCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHH
T ss_pred             EECCCCCCC---cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhh
Confidence            999997642   24578999999999999999885    4456899999997764221100  00011111100000   


Q ss_pred             ---hhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcc
Q 021819          156 ---YCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (307)
Q Consensus       156 ---~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (307)
                         .+......|+.+|...+.+.+.++.+   .++++++++||.|.++.......  ...........    ......++
T Consensus       144 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~----~~~~~~~~  217 (257)
T 1fjh_A          144 EHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQ--DPRYGESIAKF----VPPMGRRA  217 (257)
T ss_dssp             HTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------C----CCSTTSCC
T ss_pred             hcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhcc--chhHHHHHHhc----ccccCCCC
Confidence               00011257999999999999887765   58999999999999886432200  00111111100    11123578


Q ss_pred             cHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          230 PVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       230 ~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                      +++|+|+++++++..+  ...|.++..+++
T Consensus       218 ~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG  247 (257)
T 1fjh_A          218 EPSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             CTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhCchhcCCcCCEEEECCC
Confidence            9999999999998765  345765544444

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.94  E-value=5.1e-26  Score=192.35  Aligned_cols=228  Identities=16%  Similarity=0.147  Sum_probs=158.9

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCC-CCCceEEEEcccCChhHHHHHhc---C
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGA-GDANLRVFEADVLDSGAVSRAVE---G   80 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~i~~D~~d~~~~~~~~~---~   80 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++.+|+.+..+.... +... ....+..+.+|++|++++.++++   +
T Consensus         7 ~l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~   85 (267)
T 3t4x_A            7 QLKGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPK   85 (267)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCC
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCC
Confidence            45688999999999999999999999999 89999997654332211 1100 01157889999999999888876   7


Q ss_pred             ccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           81 CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        81 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      +|++|||||.....    ...+++.+.+++|+.++.++.+++    ++.+.++||++||..+..+.+..           
T Consensus        86 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  154 (267)
T 3t4x_A           86 VDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEM-----------  154 (267)
T ss_dssp             CSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTC-----------
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcc-----------
Confidence            89999999976542    223456788999999988887766    44566799999998775544332           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCC--------CcchHHHHHHHHcCCCCCC
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPY--------LNASCAVLQQLLQGSKDTQ  221 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~--------~~~~~~~~~~~~~~~~~~~  221 (307)
                               ..|+.+|...+.+.+.++.+.   ++++++++||.+.++.....        .................  
T Consensus       155 ---------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  223 (267)
T 3t4x_A          155 ---------AHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRP--  223 (267)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCT--
T ss_pred             ---------hHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCC--
Confidence                     579999999999999888764   79999999999987632110        00001111111110000  


Q ss_pred             CCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCC
Q 021819          222 EYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNG  256 (307)
Q Consensus       222 ~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~  256 (307)
                      ......+.+++|+|+++++++...  ...|..+..++
T Consensus       224 ~~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdG  260 (267)
T 3t4x_A          224 TSIIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDG  260 (267)
T ss_dssp             TCSSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cccccCccCHHHHHHHHHHHcCccccCccCCeEEECC
Confidence            002356889999999999988743  34576444333

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.94  E-value=1.2e-25  Score=188.79  Aligned_cols=222  Identities=15%  Similarity=0.141  Sum_probs=159.0

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEE-eCCCCCCcccc-cCCCCCCCceEEEEcccCChhHHHHHhcC----
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVEG----   80 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~~----   80 (307)
                      +++|+++||||+|+||++++++|+++|+ +|+++ .|+.+..+... .+..... ++..+.+|++|.++++++++.    
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   82 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGG-SAFSIGANLESLHGVEALYSSLDNE   82 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCSHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhcCC-ceEEEecCcCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999 78775 44443332221 1111122 688899999999888777652    


Q ss_pred             ---------ccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcc
Q 021819           81 ---------CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKV  145 (307)
Q Consensus        81 ---------~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~  145 (307)
                               +|++|||||.....    ...+.+++.+++|+.++.++++++...  +.++||++||..+..+.+..    
T Consensus        83 ~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~----  158 (255)
T 3icc_A           83 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDF----  158 (255)
T ss_dssp             HHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTTB----
T ss_pred             hcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCCc----
Confidence                     89999999976432    223345788999999999999999765  34689999997765544332    


Q ss_pred             cccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCC
Q 021819          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (307)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (307)
                                      ..|+.+|.+.+.+.+.++.+   .++++++++||.|.++........ ...........     
T Consensus       159 ----------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~-----  216 (255)
T 3icc_A          159 ----------------IAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSD-PMMKQYATTIS-----  216 (255)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTS-HHHHHHHHHTS-----
T ss_pred             ----------------chhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhccc-HHHHHhhhccC-----
Confidence                            57999999999999888776   489999999999999876543221 11122222222     


Q ss_pred             CcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          223 YHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       223 ~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                       ....+.+++|+|+++++++...  ...|..+..+++
T Consensus       217 -~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG  252 (255)
T 3icc_A          217 -AFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGG  252 (255)
T ss_dssp             -TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             -CcCCCCCHHHHHHHHHHHhCcccCCccCCEEEecCC
Confidence             2345789999999999988543  345765444433

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.94  E-value=4e-26  Score=194.75  Aligned_cols=213  Identities=15%  Similarity=0.094  Sum_probs=156.3

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCC--eEEEEeCCCCCCcccccCC-CC-CCCceEEEEcccCChhHHHHHhc--
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYT--SINATVFPGSDSSHLFALP-GA-GDANLRVFEADVLDSGAVSRAVE--   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~~~~~~~-~~-~~~~~~~i~~D~~d~~~~~~~~~--   79 (307)
                      .+++|+++||||+|+||+++++.|+++|+.  .|++.+|+.+..+.+.... .. ...++.++++|++|+++++++++  
T Consensus        30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  109 (287)
T 3rku_A           30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL  109 (287)
T ss_dssp             HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred             hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            456889999999999999999999998762  7888888765544332211 00 01268899999999999998886  


Q ss_pred             -----CccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcc
Q 021819           80 -----GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKV  145 (307)
Q Consensus        80 -----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~  145 (307)
                           ++|+||||||....     ....+++.+.+++|+.|+.++++++    ++.+.++||++||..+..+.+..    
T Consensus       110 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~----  185 (287)
T 3rku_A          110 PQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTG----  185 (287)
T ss_dssp             CGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTC----
T ss_pred             HHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCC----
Confidence                 47999999997542     1233456899999999999999998    44566899999998775554432    


Q ss_pred             cccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCC
Q 021819          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (307)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (307)
                                      ..|+.+|...+.+.+.++.+   .|+++++|+||.|.++...................      
T Consensus       186 ----------------~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~------  243 (287)
T 3rku_A          186 ----------------SIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKD------  243 (287)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTT------
T ss_pred             ----------------chHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcc------
Confidence                            57999999999999988877   58999999999998874211000011111121221      


Q ss_pred             CcccCcccHHHHHHHHHHhhcCCCC
Q 021819          223 YHWLGAVPVKDVAKAQVLLFESPAA  247 (307)
Q Consensus       223 ~~~~~~i~~~dva~~~~~~~~~~~~  247 (307)
                         ..+++++|+|+++++++..+..
T Consensus       244 ---~~p~~pedvA~~v~~l~s~~~~  265 (287)
T 3rku_A          244 ---TTPLMADDVADLIVYATSRKQN  265 (287)
T ss_dssp             ---SCCEEHHHHHHHHHHHHTSCTT
T ss_pred             ---cCCCCHHHHHHHHHHHhCCCCC
Confidence               1235899999999999987654

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.94  E-value=1e-25  Score=189.05  Aligned_cols=222  Identities=18%  Similarity=0.158  Sum_probs=154.7

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+....  . .++.++++|++|+++++++++       
T Consensus         4 l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (253)
T 1hxh_A            4 LQGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAEL--G-ERSMFVRHDVSSEADWTLVMAAVQRRLG   79 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHH--C-TTEEEECCCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc--C-CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3578999999999999999999999999 8999998764433322111  1 168899999999999888776       


Q ss_pred             CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                      ++|+||||||.....    ...+++.+.+++|+.++.++.+++    ++.+ ++||++||..+..+.+..          
T Consensus        80 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~----------  148 (253)
T 1hxh_A           80 TLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQY----------  148 (253)
T ss_dssp             SCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTB----------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCC----------
Confidence            469999999976432    223456889999998887777655    4556 899999997765443321          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHh---c--CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---H--GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~--~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                                ..|+.+|...+.+.+.++.+   .  +++++++|||.|+++.......  .............  .....
T Consensus       149 ----------~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~--~~p~~  214 (253)
T 1hxh_A          149 ----------AGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLP--KGVSKEMVLHDPK--LNRAG  214 (253)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSC--TTCCHHHHBCBTT--TBTTC
T ss_pred             ----------ccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccc--hhhhHHHHhhhhc--cCccC
Confidence                      56999999999998887765   3  8999999999999875321000  0000110111000  00123


Q ss_pred             CcccHHHHHHHHHHhhcCCC--CCceEEecCCc
Q 021819          227 GAVPVKDVAKAQVLLFESPA--ASGRYLCTNGI  257 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~~--~~g~~~~~~~~  257 (307)
                      .+.+++|+|+++++++..+.  ..|.++..+++
T Consensus       215 ~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  247 (253)
T 1hxh_A          215 RAYMPERIAQLVLFLASDESSVMSGSELHADNS  247 (253)
T ss_dssp             CEECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             CCCCHHHHHHHHHHHcCccccCCCCcEEEECCC
Confidence            57899999999999987542  44665444433

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.94  E-value=3.3e-25  Score=189.03  Aligned_cols=216  Identities=19%  Similarity=0.205  Sum_probs=159.2

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccc--------ccCCCCCCCceEEEEcccCChhHHHHH
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL--------FALPGAGDANLRVFEADVLDSGAVSRA   77 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~i~~D~~d~~~~~~~   77 (307)
                      ++++|+++||||+|+||++++++|+++|+ +|++++|+.+..+.+        ..+..... ++.++++|++|+++++++
T Consensus         6 ~l~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~   83 (285)
T 3sc4_A            6 SLRGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGG-QALPIVGDIRDGDAVAAA   83 (285)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTS-EEEEEECCTTSHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHH
Confidence            45688999999999999999999999999 899999987643221        11111112 788999999999998888


Q ss_pred             hc-------CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc----CCcEEEEecCcceeccC-CCC
Q 021819           78 VE-------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPN-PGW  141 (307)
Q Consensus        78 ~~-------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~iSS~~~~~~~-~~~  141 (307)
                      ++       ++|++|||||.....    ...+.+.+.+++|+.++.++++++...    +.++||++||..+..+. +. 
T Consensus        84 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-  162 (285)
T 3sc4_A           84 VAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLR-  162 (285)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSC-
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCC-
Confidence            76       789999999986542    223456788999999999999998654    55799999997664432 22 


Q ss_pred             CCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecC-ceeCCCCCCCCcchHHHHHHHHcCC
Q 021819          142 KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPA-TCLGPLMQPYLNASCAVLQQLLQGS  217 (307)
Q Consensus       142 ~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~-~v~g~~~~~~~~~~~~~~~~~~~~~  217 (307)
                                         ...|+.+|...+.+.+.++.+   .|+++++++|| .+.++           +........
T Consensus       163 -------------------~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~-----------~~~~~~~~~  212 (285)
T 3sc4_A          163 -------------------PTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATA-----------AVQNLLGGD  212 (285)
T ss_dssp             -------------------SHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCH-----------HHHHHHTSC
T ss_pred             -------------------CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccH-----------HHHhhcccc
Confidence                               156999999999999988876   58999999999 45332           122222211


Q ss_pred             CCCCCCcccCcccHHHHHHHHHHhhcCCC-CCceEEecCCccc
Q 021819          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPA-ASGRYLCTNGIYQ  259 (307)
Q Consensus       218 ~~~~~~~~~~~i~~~dva~~~~~~~~~~~-~~g~~~~~~~~~~  259 (307)
                      .     ....+.+++|+|+++++++..+. ..|..+..++++.
T Consensus       213 ~-----~~~r~~~pedvA~~~~~l~s~~~~~tG~~i~~dgg~~  250 (285)
T 3sc4_A          213 E-----AMARSRKPEVYADAAYVVLNKPSSYTGNTLLCEDVLL  250 (285)
T ss_dssp             C-----CCTTCBCTHHHHHHHHHHHTSCTTCCSCEEEHHHHHH
T ss_pred             c-----cccCCCCHHHHHHHHHHHhCCcccccceEEEEcCchh
Confidence            1     23456799999999999998764 4466655555443

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.94  E-value=1.9e-25  Score=191.10  Aligned_cols=222  Identities=15%  Similarity=0.130  Sum_probs=158.9

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEe-CCCCCCccccc-CC-CCCCCceEEEEcccCChh--------
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATV-FPGSDSSHLFA-LP-GAGDANLRVFEADVLDSG--------   72 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~-r~~~~~~~~~~-~~-~~~~~~~~~i~~D~~d~~--------   72 (307)
                      |+.+++|+++||||+|+||+++++.|+++|+ +|++++ |+.+..+.+.. +. ... .++.++++|++|++        
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~~~~~~~~   81 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNVATAPVSGAD   81 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSCBCCCC---
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHhhhcC-CeeEEEEeecCCcccccccccc
Confidence            5556788999999999999999999999999 899998 86544332211 10 011 16889999999998        


Q ss_pred             ---------HHHHHhc-------CccEEEEeccCCCCCC----C--------------CChhhhhhhhhHHHHHHHHHHH
Q 021819           73 ---------AVSRAVE-------GCKGVFHVASPCTLED----P--------------VDPEKELILPAVQGTLNVLEAA  118 (307)
Q Consensus        73 ---------~~~~~~~-------~~d~vi~~a~~~~~~~----~--------------~~~~~~~~~~n~~~~~~l~~~~  118 (307)
                               ++.++++       .+|++|||||......    .              .+.+...+++|+.++.++++++
T Consensus        82 ~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  161 (291)
T 1e7w_A           82 GSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAF  161 (291)
T ss_dssp             -CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             cccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHH
Confidence                     8887776       6899999999764321    1              3345788999999999999988


Q ss_pred             H----hcC------CcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCc
Q 021819          119 K----RFG------VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVD  185 (307)
Q Consensus       119 ~----~~~------~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~  185 (307)
                      .    +.+      .++||++||..+..+.+..                    ..|+.+|...+.+.+.++.+   .+++
T Consensus       162 ~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~--------------------~~Y~asKaa~~~l~~~la~e~~~~gI~  221 (291)
T 1e7w_A          162 AHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGY--------------------TIYTMAKGALEGLTRSAALELAPLQIR  221 (291)
T ss_dssp             HHHHHTSCGGGSCSCEEEEEECCTTTTSCCTTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             HHHHHhcCCCCCCCCcEEEEEechhhcCCCCCC--------------------chhHHHHHHHHHHHHHHHHHHHhcCeE
Confidence            5    334      5799999997765443332                    57999999999998887766   4899


Q ss_pred             EEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc-CcccHHHHHHHHHHhhcCC--CCCceEEecCCcc
Q 021819          186 VVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL-GAVPVKDVAKAQVLLFESP--AASGRYLCTNGIY  258 (307)
Q Consensus       186 ~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~  258 (307)
                      +++|+||.|.++. . . .  ...........+      .. .+.+++|+|+++++++...  ...|.++..++++
T Consensus       222 vn~v~PG~v~T~~-~-~-~--~~~~~~~~~~~p------~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~  286 (291)
T 1e7w_A          222 VNGVGPGLSVLVD-D-M-P--PAVWEGHRSKVP------LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY  286 (291)
T ss_dssp             EEEEEESSBCCGG-G-S-C--HHHHHHHHTTCT------TTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             EEEEeeCCccCCc-c-C-C--HHHHHHHHhhCC------CCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCc
Confidence            9999999998876 2 2 1  233333332222      12 4679999999999998643  3457665555443

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.93  E-value=5.7e-26  Score=193.33  Aligned_cols=212  Identities=18%  Similarity=0.157  Sum_probs=151.7

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      +++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+.. +.......+.++++|++|+++++++++      
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  109 (281)
T 4dry_A           31 GEGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEF  109 (281)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999 89999997654433221 100011135889999999999888775      


Q ss_pred             -CccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHHHh----cC--CcEEEEecCcceeccCCCCCCcccc
Q 021819           80 -GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKR----FG--VRRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        80 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                       ++|++|||||....     +...+++++.+++|+.++.++.+++..    .+  .++||++||..+..+.+..      
T Consensus       110 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~------  183 (281)
T 4dry_A          110 ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNS------  183 (281)
T ss_dssp             SCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTC------
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCC------
Confidence             57999999997543     123445688999999999888887743    32  4699999998775554332      


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCC-C
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE-Y  223 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~  223 (307)
                                    ..|+.+|...+.+.+.++.+   .++++++|+||.|.++.......           ....... .
T Consensus       184 --------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-----------~~~~~~~~~  238 (281)
T 4dry_A          184 --------------APYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMST-----------GVLQANGEV  238 (281)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------C-----------EEECTTSCE
T ss_pred             --------------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcc-----------hhhhhhhcc
Confidence                          57999999999998888766   58999999999998875432110           0000001 1


Q ss_pred             cccCcccHHHHHHHHHHhhcCCCCCce
Q 021819          224 HWLGAVPVKDVAKAQVLLFESPAASGR  250 (307)
Q Consensus       224 ~~~~~i~~~dva~~~~~~~~~~~~~g~  250 (307)
                      ....+++++|+|+++++++..+.....
T Consensus       239 ~~~~~~~pedvA~~v~fL~s~~~~~~i  265 (281)
T 4dry_A          239 AAEPTIPIEHIAEAVVYMASLPLSANV  265 (281)
T ss_dssp             EECCCBCHHHHHHHHHHHHHSCTTEEE
T ss_pred             cccCCCCHHHHHHHHHHHhCCCccCcc
Confidence            233578999999999999998776543

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.93  E-value=6.3e-26  Score=189.86  Aligned_cols=204  Identities=14%  Similarity=0.100  Sum_probs=149.0

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCC-C--CCCCceEEEEcccCChhHHHHHhc---
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP-G--AGDANLRVFEADVLDSGAVSRAVE---   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~-~--~~~~~~~~i~~D~~d~~~~~~~~~---   79 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+.... .  ....++.++++|++|++++.++++   
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH   82 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999 8999999765543332210 0  010168899999999998888775   


Q ss_pred             ----CccEEEEeccCCCCCC---CCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 ----GCKGVFHVASPCTLED---PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 ----~~d~vi~~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                          ++|++|||||......   ..+.+.+.+++|+.++.++++++    ++.+.++||++||..+..+....       
T Consensus        83 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  155 (250)
T 3nyw_A           83 QKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADG-------  155 (250)
T ss_dssp             HHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCT-------
T ss_pred             HhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCC-------
Confidence                6899999999864422   22345789999999999999988    34566899999998775532222       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc---CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH---GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                                   ..|+.+|...+.+.+.++.+.   |+++++++||.|.++...           ....  .    ...
T Consensus       156 -------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~-----------~~~~--~----~~~  205 (250)
T 3nyw_A          156 -------------GIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAK-----------KAGT--P----FKD  205 (250)
T ss_dssp             -------------THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHH-----------HTTC--C----SCG
T ss_pred             -------------cchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhh-----------hcCC--C----ccc
Confidence                         579999999999988887664   899999999999765311           1111  0    123


Q ss_pred             cCcccHHHHHHHHHHhhcCCCC
Q 021819          226 LGAVPVKDVAKAQVLLFESPAA  247 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~~~  247 (307)
                      ..+++++|+|+++++++..+..
T Consensus       206 ~~~~~p~dva~~v~~l~s~~~~  227 (250)
T 3nyw_A          206 EEMIQPDDLLNTIRCLLNLSEN  227 (250)
T ss_dssp             GGSBCHHHHHHHHHHHHTSCTT
T ss_pred             ccCCCHHHHHHHHHHHHcCCCc
Confidence            4578999999999999986653

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.93  E-value=5.4e-26  Score=188.74  Aligned_cols=189  Identities=17%  Similarity=0.191  Sum_probs=145.0

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc---------
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---------   79 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~---------   79 (307)
                      +|+++||||+|+||++++++|+++|+ +|++++|+......          ...++.+|++|++++.++++         
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~----------~~~~~~~D~~~~~~~~~~~~~~~~~~~~g   71 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQAD----------SNILVDGNKNWTEQEQSILEQTASSLQGS   71 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTSS----------EEEECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecCcccccc----------ccEEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            57999999999999999999999999 99999997654321          45677899999988887765         


Q ss_pred             CccEEEEeccCCCCCC-----CCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           80 GCKGVFHVASPCTLED-----PVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      ++|+||||||......     ..+.+...+++|+.++.++++++.+.  ..++||++||..+..+.+..           
T Consensus        72 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  140 (236)
T 1ooe_A           72 QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSM-----------  140 (236)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTB-----------
T ss_pred             CCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCCc-----------
Confidence            7899999999764321     22345788999999999999998764  23589999997765443332           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHhc-----CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccC
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKH-----GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-----~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                               ..|+.+|...+.+.+.++.+.     ++++++++||.|.++...           .....      .....
T Consensus       141 ---------~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~-----------~~~~~------~~~~~  194 (236)
T 1ooe_A          141 ---------IGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNR-----------KWMPN------ADHSS  194 (236)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHH-----------HHSTT------CCGGG
T ss_pred             ---------HHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchh-----------hcCCC------ccccc
Confidence                     579999999999999888664     499999999999876311           11110      01234


Q ss_pred             cccHHHHHHHHHHhhcCC
Q 021819          228 AVPVKDVAKAQVLLFESP  245 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~  245 (307)
                      +++++|+|++++.++.++
T Consensus       195 ~~~~~dvA~~i~~~l~s~  212 (236)
T 1ooe_A          195 WTPLSFISEHLLKWTTET  212 (236)
T ss_dssp             CBCHHHHHHHHHHHHHCG
T ss_pred             cCCHHHHHHHHHHHHcCC
Confidence            678999999998777443

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.93  E-value=2.4e-26  Score=194.86  Aligned_cols=202  Identities=14%  Similarity=0.057  Sum_probs=151.3

Q ss_pred             cccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         5 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      +.+++|+|+||||+|+||+++++.|+++|+ +|++++|+....+.+.. +..... ++.++.+|++|++++.++++    
T Consensus        27 ~~l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~  104 (272)
T 1yb1_A           27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGA-KVHTFVVDCSNREDIYSSAKKVKA  104 (272)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcCC-eEEEEEeeCCCHHHHHHHHHHHHH
Confidence            345678999999999999999999999999 89999997644332211 111111 68899999999998888775    


Q ss_pred             ---CccEEEEeccCCCCCCC----CChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 ---GCKGVFHVASPCTLEDP----VDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                         ++|+||||||.......    .+.+...+++|+.++.++++++    ++.+.++||++||..+..+.+.        
T Consensus       105 ~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------  176 (272)
T 1yb1_A          105 EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPF--------  176 (272)
T ss_dssp             HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHH--------
T ss_pred             HCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCC--------
Confidence               68999999997654221    2345688999999988877776    3456789999999766432111        


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc------CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCC
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH------GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~------~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (307)
                             .     ..|+.+|...+.+.+.++.+.      ++++++++||.|.++.....   .     .          
T Consensus       177 -------~-----~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~---~-----~----------  226 (272)
T 1yb1_A          177 -------L-----LAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP---S-----T----------  226 (272)
T ss_dssp             -------H-----HHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT---H-----H----------
T ss_pred             -------c-----hhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc---c-----c----------
Confidence                   1     569999999999998887653      89999999999998863210   0     0          


Q ss_pred             CcccCcccHHHHHHHHHHhhcCCCC
Q 021819          223 YHWLGAVPVKDVAKAQVLLFESPAA  247 (307)
Q Consensus       223 ~~~~~~i~~~dva~~~~~~~~~~~~  247 (307)
                       ....+++++|+|++++.++..+..
T Consensus       227 -~~~~~~~~~dva~~i~~~~~~~~~  250 (272)
T 1yb1_A          227 -SLGPTLEPEEVVNRLMHGILTEQK  250 (272)
T ss_dssp             -HHCCCCCHHHHHHHHHHHHHTTCS
T ss_pred             -cccCCCCHHHHHHHHHHHHHcCCC
Confidence             123468999999999999987543

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.93  E-value=6.3e-26  Score=188.92  Aligned_cols=197  Identities=13%  Similarity=0.136  Sum_probs=148.7

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      .++|+++||||+|+||++++++|+++|+ +|++++|+......          ...++.+|++|+++++++++       
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~----------~~~~~~~D~~~~~~v~~~~~~~~~~~~   73 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEAS----------ASVIVKMTDSFTEQADQVTAEVGKLLG   73 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTSS----------EEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCChhhccC----------CcEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            4578999999999999999999999999 89999997654321          45677899999998887775       


Q ss_pred             --CccEEEEeccCCCCCC-----CCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 --GCKGVFHVASPCTLED-----PVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                        ++|+||||||......     ..+.+.+.+++|+.++.++++++...  ..++||++||..+..+.+..         
T Consensus        74 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  144 (241)
T 1dhr_A           74 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGM---------  144 (241)
T ss_dssp             TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTB---------
T ss_pred             CCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCCc---------
Confidence              6899999999764321     22345788999999999999999764  12689999997765443332         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHh-----cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcc
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                                 ..|+.+|...+.+.+.++.+     .++++++++||.|.++..           ......      ...
T Consensus       145 -----------~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~-----------~~~~~~------~~~  196 (241)
T 1dhr_A          145 -----------IGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMN-----------RKSMPE------ADF  196 (241)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHH-----------HHHSTT------SCG
T ss_pred             -----------hHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccc-----------cccCcc------hhh
Confidence                       57999999999999988765     369999999999877531           111110      112


Q ss_pred             cCcccHHHHHHHHHHhhcCCC--CCceE
Q 021819          226 LGAVPVKDVAKAQVLLFESPA--ASGRY  251 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~~--~~g~~  251 (307)
                      ..+++++|+|+++++++....  ..|.+
T Consensus       197 ~~~~~~~~vA~~v~~l~~~~~~~~~G~~  224 (241)
T 1dhr_A          197 SSWTPLEFLVETFHDWITGNKRPNSGSL  224 (241)
T ss_dssp             GGSEEHHHHHHHHHHHHTTTTCCCTTCE
T ss_pred             ccCCCHHHHHHHHHHHhcCCCcCccceE
Confidence            346789999999999986543  34654

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.93  E-value=3.3e-25  Score=188.72  Aligned_cols=223  Identities=17%  Similarity=0.108  Sum_probs=159.7

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +++|+++||||+|+||+++++.|+++|+ +|++.+|+.+..+.+....   ..++.++.+|++|++++.++++       
T Consensus         3 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (281)
T 3zv4_A            3 LTGEVALITGGASGLGRALVDRFVAEGA-RVAVLDKSAERLRELEVAH---GGNAVGVVGDVRSLQDQKRAAERCLAAFG   78 (281)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHT---BTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHc---CCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            5578999999999999999999999999 9999999765544332221   1178899999999998887775       


Q ss_pred             CccEEEEeccCCCCCCC-----C----ChhhhhhhhhHHHHHHHHHHHHhc---CCcEEEEecCcceeccCCCCCCcccc
Q 021819           80 GCKGVFHVASPCTLEDP-----V----DPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~~~-----~----~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                      ++|++|||||.......     .    +.++..+++|+.++.++++++...   ..+++|++||..+..+.+..      
T Consensus        79 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------  152 (281)
T 3zv4_A           79 KIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGGG------  152 (281)
T ss_dssp             CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSSSC------
T ss_pred             CCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCCCC------
Confidence            57999999997543111     1    135778999999999999988542   12689999998776554432      


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc--CCcEEEEecCceeCCCCCCCCcchH-------HHHHHHHcCCC
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNASC-------AVLQQLLQGSK  218 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~i~~~ivrp~~v~g~~~~~~~~~~~-------~~~~~~~~~~~  218 (307)
                                    ..|+.+|...+.+.+.++.+.  ++++++++||.|.++..........       .......... 
T Consensus       153 --------------~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  217 (281)
T 3zv4_A          153 --------------PLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVL-  217 (281)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTC-
T ss_pred             --------------chhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcC-
Confidence                          569999999999999888764  4999999999999886432210000       0111222222 


Q ss_pred             CCCCCcccCcccHHHHHHHHHHhhcCCC---CCceEEecCCccc
Q 021819          219 DTQEYHWLGAVPVKDVAKAQVLLFESPA---ASGRYLCTNGIYQ  259 (307)
Q Consensus       219 ~~~~~~~~~~i~~~dva~~~~~~~~~~~---~~g~~~~~~~~~~  259 (307)
                           ....+.+++|+|+++++++..+.   ..|..+..+++++
T Consensus       218 -----p~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~  256 (281)
T 3zv4_A          218 -----PIGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGMG  256 (281)
T ss_dssp             -----TTSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGG
T ss_pred             -----CCCCCCCHHHHHHHHHHhhcccccccccCcEEEECCCCc
Confidence                 23457899999999999987433   4576665555554

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.93  E-value=3.8e-26  Score=191.49  Aligned_cols=212  Identities=16%  Similarity=0.103  Sum_probs=156.3

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccC-CCCCCCceEEEEccc--CChhHHHHHhc---
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-PGAGDANLRVFEADV--LDSGAVSRAVE---   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~i~~D~--~d~~~~~~~~~---   79 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++.+|+.+..+.+... ......++.++.+|+  +|.++++++++   
T Consensus         9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (252)
T 3f1l_A            9 LLNDRIILVTGASDGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIA   87 (252)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHH
Confidence            45688999999999999999999999999 899999976554332211 100111578899999  89988887775   


Q ss_pred             ----CccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCccc
Q 021819           80 ----GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVF  146 (307)
Q Consensus        80 ----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~  146 (307)
                          ++|++|||||....     ....+++.+.+++|+.++.++++++    ++.+.++||++||..+..+.+..     
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-----  162 (252)
T 3f1l_A           88 VNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANW-----  162 (252)
T ss_dssp             HHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTC-----
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCC-----
Confidence                68999999997532     2223345789999999999999988    45566899999998775554332     


Q ss_pred             ccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhcC--CcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCc
Q 021819          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG--VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~--i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (307)
                                     ..|+.+|...+.+.+.++.+.+  +++++++||.|.++..           .......      .
T Consensus       163 ---------------~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~-----------~~~~~~~------~  210 (252)
T 3f1l_A          163 ---------------GAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMR-----------ASAFPTE------D  210 (252)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHH-----------HHHCTTC------C
T ss_pred             ---------------chhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchh-----------hhhCCcc------c
Confidence                           5799999999999998887753  9999999999876431           1111111      1


Q ss_pred             ccCcccHHHHHHHHHHhhcCC--CCCceEEecC
Q 021819          225 WLGAVPVKDVAKAQVLLFESP--AASGRYLCTN  255 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~  255 (307)
                      ...+.+++|+|.++++++...  ...|..+..+
T Consensus       211 ~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vd  243 (252)
T 3f1l_A          211 PQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQ  243 (252)
T ss_dssp             GGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESS
T ss_pred             hhccCCHHHHHHHHHHHcCccccCCCCCEEEeC
Confidence            234678999999999988654  3456654443

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.93  E-value=1.6e-25  Score=189.41  Aligned_cols=226  Identities=17%  Similarity=0.132  Sum_probs=163.9

Q ss_pred             ccCCcEEEEeCCc--hhhHHHHHHHHHHCCCCeEEEEeCCCCCC--cccccCCCCCCCceEEEEcccCChhHHHHHhc--
Q 021819            6 EKEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (307)
Q Consensus         6 ~~~~~~ilItGat--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--   79 (307)
                      ++++|+++||||+  |+||++++++|+++|+ +|++++|+....  +..+.+......++.++++|++|+++++++++  
T Consensus        17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   95 (267)
T 3gdg_A           17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGA-AVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDV   95 (267)
T ss_dssp             CCTTCEEEETTCCSSSSHHHHHHHHHHHTSC-EEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCCCCChHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHH
Confidence            4678899999999  9999999999999999 898888865543  22222111111278899999999999888776  


Q ss_pred             -----CccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCccc
Q 021819           80 -----GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVF  146 (307)
Q Consensus        80 -----~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~  146 (307)
                           .+|+||||||......    ..+.+...+++|+.++.++++++    ++.+.++||++||..+..+....     
T Consensus        96 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----  170 (267)
T 3gdg_A           96 VADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQ-----  170 (267)
T ss_dssp             HHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSS-----
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCC-----
Confidence                 5699999999765422    33456889999999999999988    44556799999997765443110     


Q ss_pred             ccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhcC--CcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCc
Q 021819          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG--VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~--i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (307)
                                   ....|+.+|...+.+.+.++.+.+  +++++++||.|.++......   ...........      .
T Consensus       171 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~------~  228 (267)
T 3gdg_A          171 -------------EQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVP---KETQQLWHSMI------P  228 (267)
T ss_dssp             -------------CCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSC---HHHHHHHHTTS------T
T ss_pred             -------------CCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCC---HHHHHHHHhcC------C
Confidence                         115699999999999998887753  89999999999887654321   22222222222      2


Q ss_pred             ccCcccHHHHHHHHHHhhcCC--CCCceEEecCCccc
Q 021819          225 WLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIYQ  259 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~~  259 (307)
                      ...+.+++|+|+++++++...  ...|..+..+++++
T Consensus       229 ~~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~  265 (267)
T 3gdg_A          229 MGRDGLAKELKGAYVYFASDASTYTTGADLLIDGGYT  265 (267)
T ss_dssp             TSSCEETHHHHHHHHHHHSTTCTTCCSCEEEESTTGG
T ss_pred             CCCCcCHHHHHhHhheeecCccccccCCEEEECCcee
Confidence            456788999999999998653  34576555555443

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.93  E-value=3.1e-25  Score=187.82  Aligned_cols=206  Identities=19%  Similarity=0.232  Sum_probs=145.7

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcC-------cc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG-------CK   82 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~-------~d   82 (307)
                      |+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+....... .++.++.+|++|+++++++++.       +|
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD   99 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGW-SLVLTGRREERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEEFATLR   99 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGGGSSCC
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            7999999999999999999999999 8999999765443322211111 2688999999999999988864       59


Q ss_pred             EEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHHH----hcCCc-EEEEecCcceeccCCCCCCcccccCCCC
Q 021819           83 GVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVR-RVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        83 ~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~-~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      +||||||....     ....+++...+++|+.++.++++++.    +.+.+ +||++||..+..+.+..           
T Consensus       100 ~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~-----------  168 (272)
T 2nwq_A          100 GLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGS-----------  168 (272)
T ss_dssp             EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTC-----------
T ss_pred             EEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCC-----------
Confidence            99999997542     12234568899999999888877764    45567 99999997765443332           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcc
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (307)
                               ..|+.+|...+.+.+.++.+   .|+++++++||.|.++.................         ....++
T Consensus       169 ---------~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~---------~~~~~~  230 (272)
T 2nwq_A          169 ---------HVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTY---------AGAHPI  230 (272)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-----------------------------CCCCB
T ss_pred             ---------chHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHhh---------ccCCCC
Confidence                     57999999999999888765   489999999999988763221000000000000         012247


Q ss_pred             cHHHHHHHHHHhhcCCC
Q 021819          230 PVKDVAKAQVLLFESPA  246 (307)
Q Consensus       230 ~~~dva~~~~~~~~~~~  246 (307)
                      +++|+|+++++++..+.
T Consensus       231 ~pedvA~~v~~l~s~~~  247 (272)
T 2nwq_A          231 QPEDIAETIFWIMNQPA  247 (272)
T ss_dssp             CHHHHHHHHHHHHTSCT
T ss_pred             CHHHHHHHHHHHhCCCc
Confidence            99999999999997643

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.93  E-value=4.5e-25  Score=184.62  Aligned_cols=211  Identities=15%  Similarity=0.070  Sum_probs=148.0

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccC-ChhHHHHHhcCccEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL-DSGAVSRAVEGCKGV   84 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~-d~~~~~~~~~~~d~v   84 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++++|+.+.   +..+    . .+.++ +|+. +.+.+.+.+.++|+|
T Consensus        16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~---~~~~----~-~~~~~-~D~~~~~~~~~~~~~~iD~l   85 (249)
T 1o5i_A           16 GIRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEEL---LKRS----G-HRYVV-CDLRKDLDLLFEKVKEVDIL   85 (249)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHH---HHHT----C-SEEEE-CCTTTCHHHHHHHSCCCSEE
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHH---HHhh----C-CeEEE-eeHHHHHHHHHHHhcCCCEE
Confidence            35688999999999999999999999999 89999997522   2222    1 46677 9992 223333333489999


Q ss_pred             EEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhh
Q 021819           85 FHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEY  156 (307)
Q Consensus        85 i~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~  156 (307)
                      |||||.....    ...+++...+++|+.++.++.+++    ++.+.++||++||..+..+.+..               
T Consensus        86 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------------  150 (249)
T 1o5i_A           86 VLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENL---------------  150 (249)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTB---------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCC---------------
Confidence            9999975432    223456789999999987776554    55677899999997765433221               


Q ss_pred             hcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHH-HHHcCCCCCCCCcccCcccHH
Q 021819          157 CKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQ-QLLQGSKDTQEYHWLGAVPVK  232 (307)
Q Consensus       157 ~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~  232 (307)
                           ..|+.+|...+.+.+.++.+   .|+++++++||.|+++.......   .... ......+      ...+++++
T Consensus       151 -----~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~~~p------~~~~~~~~  216 (249)
T 1o5i_A          151 -----YTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLS---EEKKKQVESQIP------MRRMAKPE  216 (249)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSC---HHHHHHHHTTST------TSSCBCHH
T ss_pred             -----chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccch---hhHHHHHHhcCC------CCCCcCHH
Confidence                 56999999999998887765   58999999999999986321111   1111 2222211      24578999


Q ss_pred             HHHHHHHHhhcCC--CCCceE-EecC
Q 021819          233 DVAKAQVLLFESP--AASGRY-LCTN  255 (307)
Q Consensus       233 dva~~~~~~~~~~--~~~g~~-~~~~  255 (307)
                      |+|+++++++..+  ...|.+ ++.+
T Consensus       217 dvA~~i~~l~s~~~~~~tG~~~~vdg  242 (249)
T 1o5i_A          217 EIASVVAFLCSEKASYLTGQTIVVDG  242 (249)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHcCccccCCCCCEEEECC
Confidence            9999999988653  234654 4443

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.93  E-value=2.5e-24  Score=187.97  Aligned_cols=213  Identities=21%  Similarity=0.185  Sum_probs=155.8

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccc--------ccCCCCCCCceEEEEcccCChhHHH
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL--------FALPGAGDANLRVFEADVLDSGAVS   75 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~i~~D~~d~~~~~   75 (307)
                      +..+++|+++||||+|+||+++++.|+++|+ +|++++|+....+.+        ..+..... ++.++.+|++|+++++
T Consensus        40 ~~~l~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~-~~~~~~~Dv~d~~~v~  117 (346)
T 3kvo_A           40 TGRLAGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGG-KALPCIVDVRDEQQIS  117 (346)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTTC-EEEEEECCTTCHHHHH
T ss_pred             CCCCCCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcCC-eEEEEEccCCCHHHHH
Confidence            3456789999999999999999999999999 899999977653221        11111112 6889999999999988


Q ss_pred             HHhc-------CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCC
Q 021819           76 RAVE-------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPG  140 (307)
Q Consensus        76 ~~~~-------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~  140 (307)
                      ++++       ++|+||||||.....    ...+.+.+.+++|+.++.++++++.    +.+.++||++||..+..+...
T Consensus       118 ~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~  197 (346)
T 3kvo_A          118 AAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWF  197 (346)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGT
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCC
Confidence            8876       789999999976532    2234568899999999999999984    445679999999776443100


Q ss_pred             CCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc--CCcEEEEecCc-eeCCCCCCCCcchHHHHHHHHcCC
Q 021819          141 WKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPAT-CLGPLMQPYLNASCAVLQQLLQGS  217 (307)
Q Consensus       141 ~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~i~~~ivrp~~-v~g~~~~~~~~~~~~~~~~~~~~~  217 (307)
                                        .....|+.+|...+.+.+.++.+.  ++++++|.||. +.++.           .... .+.
T Consensus       198 ------------------~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~~-----------~~~~-~~~  247 (346)
T 3kvo_A          198 ------------------KQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTAA-----------MDML-GGP  247 (346)
T ss_dssp             ------------------SSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCHH-----------HHHH-CC-
T ss_pred             ------------------CCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccHH-----------HHhh-ccc
Confidence                              011579999999999999888774  89999999995 53321           1111 111


Q ss_pred             CCCCCCcccCcccHHHHHHHHHHhhcCCC-CCceEEe
Q 021819          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPA-ASGRYLC  253 (307)
Q Consensus       218 ~~~~~~~~~~~i~~~dva~~~~~~~~~~~-~~g~~~~  253 (307)
                      .     ....+.+++|+|+++++++.... ..|.+++
T Consensus       248 ~-----~~~r~~~pedvA~~v~~L~s~~~~itG~~iv  279 (346)
T 3kvo_A          248 G-----IESQCRKVDIIADAAYSIFQKPKSFTGNFVI  279 (346)
T ss_dssp             ------CGGGCBCTHHHHHHHHHHHTSCTTCCSCEEE
T ss_pred             c-----ccccCCCHHHHHHHHHHHHhcCCCCCceEEE
Confidence            1     13446789999999999998722 3576663

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.93  E-value=8.6e-26  Score=188.58  Aligned_cols=206  Identities=17%  Similarity=0.160  Sum_probs=135.4

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHH---HHh---cC
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVS---RAV---EG   80 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~---~~~---~~   80 (307)
                      +++|+++||||+|+||+++++.|++ |+ .|++++|+....+.+....     ++.++.+|+++.++..   +.+   .+
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~-g~-~v~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~   75 (245)
T 3e9n_A            3 LKKKIAVVTGATGGMGIEIVKDLSR-DH-IVYALGRNPEHLAALAEIE-----GVEPIESDIVKEVLEEGGVDKLKNLDH   75 (245)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHHTST-----TEEEEECCHHHHHHTSSSCGGGTTCSC
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHhhc-----CCcceecccchHHHHHHHHHHHHhcCC
Confidence            4578999999999999999999987 88 8999999765554443321     6889999998875422   122   26


Q ss_pred             ccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           81 CKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        81 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      +|+||||||......    ..+.+.+.+++|+.++.++++++.    +.+ +++|++||..+..+.+..           
T Consensus        76 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~-----------  143 (245)
T 3e9n_A           76 VDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGN-----------  143 (245)
T ss_dssp             CSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------C-----------
T ss_pred             CCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCc-----------
Confidence            899999999865422    223457889999999888888874    334 789999998776554332           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcc
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (307)
                               ..|+.+|.+.+.+.+.++.+   .|+++++++||.|.++.......       .....      .....++
T Consensus       144 ---------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-------~~~~~------~~~~~~~  201 (245)
T 3e9n_A          144 ---------TIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMD-------SQGTN------FRPEIYI  201 (245)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------------------------CCGGGS
T ss_pred             ---------hHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhh-------hhhcc------cccccCC
Confidence                     57999999999999988776   58999999999999876432210       00000      0234578


Q ss_pred             cHHHHHHHHHHhhcCCCCCceEEe
Q 021819          230 PVKDVAKAQVLLFESPAASGRYLC  253 (307)
Q Consensus       230 ~~~dva~~~~~~~~~~~~~g~~~~  253 (307)
                      +++|+|+++++++..+.....+++
T Consensus       202 ~p~dvA~~i~~l~~~~~~~~~~~i  225 (245)
T 3e9n_A          202 EPKEIANAIRFVIDAGETTQITNV  225 (245)
T ss_dssp             CHHHHHHHHHHHHTSCTTEEEEEE
T ss_pred             CHHHHHHHHHHHHcCCCccceeee
Confidence            999999999999998776555544

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.93  E-value=2.4e-25  Score=186.47  Aligned_cols=192  Identities=15%  Similarity=0.178  Sum_probs=149.6

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------Cc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~~   81 (307)
                      +|+|+||||+|+||+++++.|+++|+ +|++++|+.....            ...+.+|++|.++++++++       ++
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~------------~~~~~~d~~d~~~v~~~~~~~~~~~g~i   88 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKSW-NTISIDFRENPNA------------DHSFTIKDSGEEEIKSVIEKINSKSIKV   88 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCTTS------------SEEEECSCSSHHHHHHHHHHHHTTTCCE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCccccc------------ccceEEEeCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999 8999999765432            2356789999999888775       46


Q ss_pred             cEEEEeccCCCCC-----CCCChhhhhhhhhHHHHHHHHHHHHhcC--CcEEEEecCcceeccCCCCCCcccccCCCCch
Q 021819           82 KGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAKRFG--VRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (307)
Q Consensus        82 d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~  154 (307)
                      |+||||||.....     ...+++.+.+++|+.++.++++++...-  .++||++||..+..+.+..             
T Consensus        89 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------------  155 (251)
T 3orf_A           89 DTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSGM-------------  155 (251)
T ss_dssp             EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTB-------------
T ss_pred             CEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCCC-------------
Confidence            9999999975432     2233457889999999999999997642  2589999998776554332             


Q ss_pred             hhhcccCccHHHHHHHHHHHHHHHHHh-----cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcc
Q 021819          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (307)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (307)
                             ..|+.+|.+.+.+.+.++.+     .++++++++||.|.++..           .......      ....++
T Consensus       156 -------~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~-----------~~~~~~~------~~~~~~  211 (251)
T 3orf_A          156 -------IAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTN-----------RKYMSDA------NFDDWT  211 (251)
T ss_dssp             -------HHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHH-----------HHHCTTS------CGGGSB
T ss_pred             -------chhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcch-----------hhhcccc------cccccC
Confidence                   57999999999999988877     589999999999977531           1111111      245678


Q ss_pred             cHHHHHHHHHHhhcC---CCCCce
Q 021819          230 PVKDVAKAQVLLFES---PAASGR  250 (307)
Q Consensus       230 ~~~dva~~~~~~~~~---~~~~g~  250 (307)
                      +++|+|+++++++..   ....|.
T Consensus       212 ~~~dva~~i~~l~~~~~~~~~tG~  235 (251)
T 3orf_A          212 PLSEVAEKLFEWSTNSDSRPTNGS  235 (251)
T ss_dssp             CHHHHHHHHHHHHHCGGGCCCTTC
T ss_pred             CHHHHHHHHHHHhcCccccCCcce
Confidence            999999999999987   444564

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.93  E-value=2.9e-25  Score=186.40  Aligned_cols=219  Identities=11%  Similarity=0.061  Sum_probs=146.7

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHH----HhcCccEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSR----AVEGCKGV   84 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~----~~~~~d~v   84 (307)
                      ||+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+..+..... ++..+  |..+.+.+.+    .+.++|+|
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~-~~~~~--d~~~v~~~~~~~~~~~g~iD~l   76 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYP-QLKPM--SEQEPAELIEAVTSAYGQVDVL   76 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCT-TSEEC--CCCSHHHHHHHHHHHHSCCCEE
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCC-cEEEE--CHHHHHHHHHHHHHHhCCCCEE
Confidence            46899999999999999999999999 89999997655443322110011 33333  4433322222    12378999


Q ss_pred             EEeccCC-CC----CCCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccCCCCchh
Q 021819           85 FHVASPC-TL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (307)
Q Consensus        85 i~~a~~~-~~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~  155 (307)
                      |||||.. ..    ....+++.+.+++|+.++.++++++.    +.+.++||++||..+..+.+..              
T Consensus        77 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------  142 (254)
T 1zmt_A           77 VSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKEL--------------  142 (254)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTC--------------
T ss_pred             EECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCc--------------
Confidence            9999976 32    12234568899999999999999874    4456799999997765443332              


Q ss_pred             hhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCc-----chHHHHHHHHcCCCCCCCCcccC
Q 021819          156 YCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN-----ASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                            ..|+.+|...+.+.+.++.+   .++++++++||.|+|+.......     .............      ....
T Consensus       143 ------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~------p~~~  210 (254)
T 1zmt_A          143 ------STYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVT------ALQR  210 (254)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHS------SSSS
T ss_pred             ------hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccC------CCCC
Confidence                  57999999999999888766   38999999999998876443210     0011111111111      1234


Q ss_pred             cccHHHHHHHHHHhhcCCC--CCceEEecCCc
Q 021819          228 AVPVKDVAKAQVLLFESPA--ASGRYLCTNGI  257 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~~--~~g~~~~~~~~  257 (307)
                      +.+++|+|+++++++..+.  ..|.++..+++
T Consensus       211 ~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG  242 (254)
T 1zmt_A          211 LGTQKELGELVAFLASGSCDYLTGQVFWLAGG  242 (254)
T ss_dssp             CBCHHHHHHHHHHHHTTSCGGGTTCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence            7899999999999987543  34665544444

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.93  E-value=1.2e-24  Score=184.55  Aligned_cols=211  Identities=16%  Similarity=0.157  Sum_probs=152.0

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc--------CCCCCCCceEEEEcccCChhHHHHH
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA--------LPGAGDANLRVFEADVLDSGAVSRA   77 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~i~~D~~d~~~~~~~   77 (307)
                      ++++|+++||||+|+||+++++.|+++|+ +|++.+|+....+.+..        +... ..++.++++|++|+++++++
T Consensus         3 ~l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~   80 (274)
T 3e03_A            3 TLSGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAA-GGQGLALKCDIREEDQVRAA   80 (274)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHH-TSEEEEEECCTTCHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhc-CCeEEEEeCCCCCHHHHHHH
Confidence            35678999999999999999999999999 89999997654322111        0000 12688999999999998887


Q ss_pred             hc-------CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCC
Q 021819           78 VE-------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWK  142 (307)
Q Consensus        78 ~~-------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~  142 (307)
                      ++       ++|++|||||.....    ...+.+.+.+++|+.++.++.+++..    .+.++||++||..+..+..   
T Consensus        81 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~---  157 (274)
T 3e03_A           81 VAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW---  157 (274)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH---
T ss_pred             HHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC---
Confidence            75       689999999976432    23345688999999999999998743    4567999999976543210   


Q ss_pred             CcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecC-ceeCCCCCCCCcchHHHHHHHHcCCC
Q 021819          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPA-TCLGPLMQPYLNASCAVLQQLLQGSK  218 (307)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~-~v~g~~~~~~~~~~~~~~~~~~~~~~  218 (307)
                                     ......|+.+|...+.+.+.++.+   .|+++++++|| .+.++....            .... 
T Consensus       158 ---------------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~------------~~~~-  209 (274)
T 3e03_A          158 ---------------WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINM------------LPGV-  209 (274)
T ss_dssp             ---------------HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-------------------CC-
T ss_pred             ---------------CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhh------------cccc-
Confidence                           011256999999999999888766   48999999999 465543210            0111 


Q ss_pred             CCCCCcccCcccHHHHHHHHHHhhcCCC--CCceEEec
Q 021819          219 DTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCT  254 (307)
Q Consensus       219 ~~~~~~~~~~i~~~dva~~~~~~~~~~~--~~g~~~~~  254 (307)
                           ....+.+++|+|+++++++....  ..|.++..
T Consensus       210 -----~~~~~~~pedvA~~v~~l~s~~~~~itG~~i~~  242 (274)
T 3e03_A          210 -----DAAACRRPEIMADAAHAVLTREAAGFHGQFLID  242 (274)
T ss_dssp             -----CGGGSBCTHHHHHHHHHHHTSCCTTCCSCEEEH
T ss_pred             -----cccccCCHHHHHHHHHHHhCccccccCCeEEEc
Confidence                 12336799999999999997543  34666643

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.92  E-value=1.8e-24  Score=183.01  Aligned_cols=223  Identities=15%  Similarity=0.102  Sum_probs=156.3

Q ss_pred             ccCCcEEEEeCC--chhhHHHHHHHHHHCCCCeEEEEeCCCCCC-cccccCCCCCCCceEEEEcccCChhHHHHHhc---
Q 021819            6 EKEEETVCVTGA--NGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (307)
Q Consensus         6 ~~~~~~ilItGa--tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~---   79 (307)
                      .+++|+++||||  +|+||+++++.|+++|+ +|++++|+.... +.+....  . .++.++++|++|+++++++++   
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~-~~~~~~~~Dv~~~~~v~~~~~~~~   79 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRL--P-AKAPLLELDVQNEEHLASLAGRVT   79 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTS--S-SCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHhc--C-CCceEEEccCCCHHHHHHHHHHHH
Confidence            456789999999  99999999999999999 899999876431 2222211  1 157889999999999888876   


Q ss_pred             -------CccEEEEeccCCCC---------CCCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCC
Q 021819           80 -------GCKGVFHVASPCTL---------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGW  141 (307)
Q Consensus        80 -------~~d~vi~~a~~~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~  141 (307)
                             ++|++|||||....         ....+++.+.+++|+.++.++++++...  ..++||++||... ++.+. 
T Consensus        80 ~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~-~~~~~-  157 (269)
T 2h7i_A           80 EAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS-RAMPA-  157 (269)
T ss_dssp             HHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS-SCCTT-
T ss_pred             HHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccc-cccCc-
Confidence                   78999999997641         1233456788999999999999999754  1258999998654 22222 


Q ss_pred             CCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCC-----Ccch----HHH
Q 021819          142 KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY-----LNAS----CAV  209 (307)
Q Consensus       142 ~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~-----~~~~----~~~  209 (307)
                                    +     ..|+.+|...+.+.+.++.+   .|+++++++||.|.++.....     ....    ...
T Consensus       158 --------------~-----~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  218 (269)
T 2h7i_A          158 --------------Y-----NWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLL  218 (269)
T ss_dssp             --------------T-----HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHH
T ss_pred             --------------h-----HHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHH
Confidence                          1     57999999999998887766   489999999999977632110     0000    001


Q ss_pred             HHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCcc
Q 021819          210 LQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIY  258 (307)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~  258 (307)
                      ........+.     .+.+..++|+|+++++++...  ...|..+..++++
T Consensus       219 ~~~~~~~~p~-----~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  264 (269)
T 2h7i_A          219 EEGWDQRAPI-----GWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA  264 (269)
T ss_dssp             HHHHHHHCTT-----CCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred             HHhhhccCCc-----ccCCCCHHHHHHHHHHHhCchhccCcceEEEecCCe
Confidence            1111111110     114678999999999998653  2457666555554

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.92  E-value=4.7e-25  Score=188.32  Aligned_cols=202  Identities=16%  Similarity=0.079  Sum_probs=148.3

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccC-CCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-PGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      .++|+|+||||+|+||+++++.|+++|+ +|++++|+.+..+.+... ...+..++.++.+|++|.+++.++++      
T Consensus        26 ~~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  104 (286)
T 1xu9_A           26 LQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM  104 (286)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999 899999976544332211 00011157899999999988887775      


Q ss_pred             -CccEEEEe-ccCCCCC---CCCChhhhhhhhhHHHHHHHHHHHHhc---CCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 -GCKGVFHV-ASPCTLE---DPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 -~~d~vi~~-a~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                       ++|+|||| ||.....   ...+.+...+++|+.++.++++++...   +.++||++||..+..+.+..          
T Consensus       105 g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  174 (286)
T 1xu9_A          105 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMV----------  174 (286)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTC----------
T ss_pred             CCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCCCc----------
Confidence             68999999 5654321   122345788999999999999988542   23699999997765443322          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHhc-----CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH-----GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-----~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                                ..|+.+|...+.+.+.++.+.     ++++++++||.|.++...           ....+      ....
T Consensus       175 ----------~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~-----------~~~~~------~~~~  227 (286)
T 1xu9_A          175 ----------AAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAM-----------KAVSG------IVHM  227 (286)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHH-----------HHSCG------GGGG
T ss_pred             ----------cHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHH-----------Hhccc------cccC
Confidence                      579999999999988776554     899999999998765311           10010      1123


Q ss_pred             CcccHHHHHHHHHHhhcCCC
Q 021819          227 GAVPVKDVAKAQVLLFESPA  246 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~~  246 (307)
                      .+++++|+|+.++.+++.+.
T Consensus       228 ~~~~~~~vA~~i~~~~~~~~  247 (286)
T 1xu9_A          228 QAAPKEECALEIIKGGALRQ  247 (286)
T ss_dssp             GCBCHHHHHHHHHHHHHTTC
T ss_pred             CCCCHHHHHHHHHHHHhcCC
Confidence            56899999999999998654

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.92  E-value=5.2e-24  Score=184.97  Aligned_cols=221  Identities=25%  Similarity=0.195  Sum_probs=152.8

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCC------CCCCCceEEEEcccCChhHHHHHhcC--
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP------GAGDANLRVFEADVLDSGAVSRAVEG--   80 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~i~~D~~d~~~~~~~~~~--   80 (307)
                      +|+|+||||+|+||++++++|+++|+ +|+.+.|+....+......      .....++.++.+|++|.+++.++++.  
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~-~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPS-QSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTT-CCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-ceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            57999999999999999999999999 7777777544332221110      00112688999999999999998875  


Q ss_pred             ---ccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccC
Q 021819           81 ---CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        81 ---~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                         +|+||||||.....    ...+++.+.+++|+.++.++++++    ++.+.++||++||..+..+.+..        
T Consensus        81 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~--------  152 (327)
T 1jtv_A           81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFN--------  152 (327)
T ss_dssp             TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTC--------
T ss_pred             cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCC--------
Confidence               89999999975432    123456789999999999999986    44567899999997765443332        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchH-----------HHHHHHHc
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASC-----------AVLQQLLQ  215 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~-----------~~~~~~~~  215 (307)
                                  ..|+.+|...+.+.+.++.+   .|+++++|+||.|.++..........           ..+.....
T Consensus       153 ------------~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (327)
T 1jtv_A          153 ------------DVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLA  220 (327)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHH
T ss_pred             ------------hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHH
Confidence                        57999999999999888775   58999999999999886433211100           00000000


Q ss_pred             CCCCCCCCcccC-cccHHHHHHHHHHhhcCCCCCceEEec
Q 021819          216 GSKDTQEYHWLG-AVPVKDVAKAQVLLFESPAASGRYLCT  254 (307)
Q Consensus       216 ~~~~~~~~~~~~-~i~~~dva~~~~~~~~~~~~~g~~~~~  254 (307)
                      ...    ..... ..+++|+|+++++++..+.....|+.+
T Consensus       221 ~~~----~~~~~~~~~pedvA~~i~~l~~~~~~~~~~~tg  256 (327)
T 1jtv_A          221 HSK----QVFREAAQNPEEVAEVFLTALRAPKPTLRYFTT  256 (327)
T ss_dssp             HHH----HHHHHHCBCHHHHHHHHHHHHHCSSCCSEEESC
T ss_pred             HHH----HhhhhcCCCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            000    00011 258999999999999876655556544

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.92  E-value=4.9e-25  Score=184.22  Aligned_cols=201  Identities=18%  Similarity=0.156  Sum_probs=149.3

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEccc--CChhHHHHHhc---
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADV--LDSGAVSRAVE---   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~--~d~~~~~~~~~---   79 (307)
                      .+++|+++||||+|+||+++++.|+++|+ +|++++|+....+.+.. +......+..++.+|+  +|.+++.++++   
T Consensus        11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~   89 (247)
T 3i1j_A           11 LLKGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVE   89 (247)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHH
Confidence            45678999999999999999999999999 89999997655433222 1111111567777777  88888877765   


Q ss_pred             ----CccEEEEeccCCCCC-----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCccc
Q 021819           80 ----GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVF  146 (307)
Q Consensus        80 ----~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~  146 (307)
                          ++|++|||||.....     ...+++.+.+++|+.++.++++++    ++.+.++||++||..+..+.+..     
T Consensus        90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-----  164 (247)
T 3i1j_A           90 HEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANW-----  164 (247)
T ss_dssp             HHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTC-----
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCc-----
Confidence                689999999975321     233456889999999999999998    44556799999997765544332     


Q ss_pred             ccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh----cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCC
Q 021819          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (307)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (307)
                                     ..|+.+|.+.+.+.+.++.+    .++++++++||.|.++..           .......     
T Consensus       165 ---------------~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~-----------~~~~~~~-----  213 (247)
T 3i1j_A          165 ---------------GAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMR-----------AQAYPDE-----  213 (247)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHH-----------HHHSTTS-----
T ss_pred             ---------------chhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccc-----------hhccccc-----
Confidence                           57999999999999888766    479999999998866431           1111111     


Q ss_pred             CcccCcccHHHHHHHHHHhhcC
Q 021819          223 YHWLGAVPVKDVAKAQVLLFES  244 (307)
Q Consensus       223 ~~~~~~i~~~dva~~~~~~~~~  244 (307)
                       ....+.+++|+|+++++++..
T Consensus       214 -~~~~~~~p~dva~~~~~l~s~  234 (247)
T 3i1j_A          214 -NPLNNPAPEDIMPVYLYLMGP  234 (247)
T ss_dssp             -CGGGSCCGGGGTHHHHHHHSG
T ss_pred             -CccCCCCHHHHHHHHHHHhCc
Confidence             223467899999999998864

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.92  E-value=2.5e-24  Score=181.24  Aligned_cols=219  Identities=19%  Similarity=0.140  Sum_probs=147.3

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      ++|+++||||+|+||+++++.|+++|+ +|++++|+.+..+.+.. +.... .++.++++|++|+++++++++       
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   81 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLG-GQCVPVVCDSSQESEVRSLFEQVDREQQ   81 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHS-SEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcC-CceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            468999999999999999999999999 89999997544332221 10001 168899999999988877654       


Q ss_pred             -CccEEEEecc--CC--------C-CCCCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCC
Q 021819           80 -GCKGVFHVAS--PC--------T-LEDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKG  143 (307)
Q Consensus        80 -~~d~vi~~a~--~~--------~-~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~  143 (307)
                       .+|++|||||  ..        . .....+.+...+++|+.++.++.+++.    +.+.++||++||..+..+.+    
T Consensus        82 g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----  157 (260)
T 2qq5_A           82 GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMF----  157 (260)
T ss_dssp             TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCCS----
T ss_pred             CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCCC----
Confidence             4699999994  21        1 123445678899999999987777663    45668999999976532211    


Q ss_pred             cccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCC
Q 021819          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT  220 (307)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  220 (307)
                                       ...|+.+|...+.+.+.++.+   .|+++++++||.|.++...................    
T Consensus       158 -----------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~----  216 (260)
T 2qq5_A          158 -----------------NVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQ----  216 (260)
T ss_dssp             -----------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC---------------------
T ss_pred             -----------------CCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHH----
Confidence                             146999999999999888765   48999999999999886432110000000000000    


Q ss_pred             CCCcccCcccHHHHHHHHHHhhcCCCC---CceEEe
Q 021819          221 QEYHWLGAVPVKDVAKAQVLLFESPAA---SGRYLC  253 (307)
Q Consensus       221 ~~~~~~~~i~~~dva~~~~~~~~~~~~---~g~~~~  253 (307)
                      .......+.+++|+|+++++++..+..   .|.++.
T Consensus       217 ~~~~~~~~~~pe~va~~v~~l~s~~~~~~itG~~i~  252 (260)
T 2qq5_A          217 FKSAFSSAETTELSGKCVVALATDPNILSLSGKVLP  252 (260)
T ss_dssp             -----CHHHHHHHHHHHHHHHHTCTTGGGGTTCEEE
T ss_pred             HHhhhccCCCHHHHHHHHHHHhcCcccccccceeec
Confidence            000011246899999999999876542   455443

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.91  E-value=1.8e-23  Score=180.47  Aligned_cols=215  Identities=18%  Similarity=0.118  Sum_probs=149.9

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccc-ccCCCCCCCceEEEEcccCCh-hHHHHHhc----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGAGDANLRVFEADVLDS-GAVSRAVE----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~i~~D~~d~-~~~~~~~~----   79 (307)
                      +.++|+|+||||+|+||+++++.|+++|+ +|++.+|+....+.. ..+......++.++.+|++|. +++.++++    
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~   87 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKT   87 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHH
Confidence            45678999999999999999999999999 999999976553322 222222222789999999998 77776664    


Q ss_pred             ---CccEEEEeccCCCC----------------------------------CCCCChhhhhhhhhHHHHHHHHHHHH---
Q 021819           80 ---GCKGVFHVASPCTL----------------------------------EDPVDPEKELILPAVQGTLNVLEAAK---  119 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~----------------------------------~~~~~~~~~~~~~n~~~~~~l~~~~~---  119 (307)
                         ++|+||||||....                                  ....+.+++.+++|+.|+.++++++.   
T Consensus        88 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l  167 (311)
T 3o26_A           88 HFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLL  167 (311)
T ss_dssp             HHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             hCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhh
Confidence               78999999998632                                  11223456779999999999988874   


Q ss_pred             -hcCCcEEEEecCcceeccCCCCC---CcccccCCCC---------------------chhhhcccCccHHHHHHHHHHH
Q 021819          120 -RFGVRRVVVTSSISAIVPNPGWK---GKVFDETSWT---------------------DLEYCKSRKKWYPVSKTLAEKA  174 (307)
Q Consensus       120 -~~~~~~~v~iSS~~~~~~~~~~~---~~~~~E~~~~---------------------~~~~~~~~~~~y~~sK~~~e~~  174 (307)
                       +.+.++||++||..+..+.....   ....+++.+.                     ...+ ......|+.+|.+.+.+
T Consensus       168 ~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Y~~SK~a~~~~  246 (311)
T 3o26_A          168 QLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGW-PSFGAAYTTSKACLNAY  246 (311)
T ss_dssp             TTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTC-CSSCHHHHHHHHHHHHH
T ss_pred             ccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccC-cccchhhHHHHHHHHHH
Confidence             34567999999987655432110   0000000000                     0000 01225699999999999


Q ss_pred             HHHHHHhc-CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCCC
Q 021819          175 AWEFAEKH-GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA  246 (307)
Q Consensus       175 ~~~~~~~~-~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~  246 (307)
                      .+.++++. ++++++++||.|.++.....                        ...++++.++.++.++..+.
T Consensus       247 ~~~la~e~~~i~v~~v~PG~v~T~~~~~~------------------------~~~~~~~~a~~~~~~~~~~~  295 (311)
T 3o26_A          247 TRVLANKIPKFQVNCVCPGLVKTEMNYGI------------------------GNYTAEEGAEHVVRIALFPD  295 (311)
T ss_dssp             HHHHHHHCTTSEEEEECCCSBCSGGGTTC------------------------CSBCHHHHHHHHHHHHTCCS
T ss_pred             HHHHHhhcCCceEEEecCCceecCCcCCC------------------------CCCCHHHHHHHHHHHHhCCC
Confidence            99998885 79999999999988753221                        23588999999998887654

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.91  E-value=4.6e-24  Score=179.54  Aligned_cols=219  Identities=17%  Similarity=0.119  Sum_probs=152.5

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHH---CCCCeEEEEeCCCCCCccccc-CCCC-CCCceEEEEcccCChhHHHHHhc--
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLD---NNYTSINATVFPGSDSSHLFA-LPGA-GDANLRVFEADVLDSGAVSRAVE--   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~---~g~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~i~~D~~d~~~~~~~~~--   79 (307)
                      +++|+++||||+|+||+++++.|++   +|+ +|++++|+.+..+.+.. +... ...++.++++|++|+++++++++  
T Consensus         4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (259)
T 1oaa_A            4 LGCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence            3478999999999999999999999   899 99999997654333221 1000 01168899999999998887764  


Q ss_pred             -------Ccc--EEEEeccCCCC--C-----CCCChhhhhhhhhHHHHHHHHHHHHhc------CCcEEEEecCcceecc
Q 021819           80 -------GCK--GVFHVASPCTL--E-----DPVDPEKELILPAVQGTLNVLEAAKRF------GVRRVVVTSSISAIVP  137 (307)
Q Consensus        80 -------~~d--~vi~~a~~~~~--~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~v~iSS~~~~~~  137 (307)
                             .+|  ++|||||....  .     ...+++...+++|+.++.++++++...      +.++||++||..+..+
T Consensus        83 ~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~  162 (259)
T 1oaa_A           83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP  162 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred             HhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCC
Confidence                   357  99999997532  1     233567889999999999999999643      3468999999776544


Q ss_pred             CCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc-CCcEEEEecCceeCCCCCCCCc--chHHHHHHHH
Q 021819          138 NPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH-GVDVVAIHPATCLGPLMQPYLN--ASCAVLQQLL  214 (307)
Q Consensus       138 ~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-~i~~~ivrp~~v~g~~~~~~~~--~~~~~~~~~~  214 (307)
                      .+..                    ..|+.+|...+.+.+.++.+. ++++++++||.|.++.......  ..........
T Consensus       163 ~~~~--------------------~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  222 (259)
T 1oaa_A          163 YKGW--------------------GLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQ  222 (259)
T ss_dssp             CTTC--------------------HHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHH
T ss_pred             CCCc--------------------cHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhccCChhHHHHHH
Confidence            3332                    579999999999999988775 5999999999987653211000  0001111111


Q ss_pred             cCCCCCCCCcccCcccHHHHHHHHHHhhcCC-CCCceEE
Q 021819          215 QGSKDTQEYHWLGAVPVKDVAKAQVLLFESP-AASGRYL  252 (307)
Q Consensus       215 ~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~-~~~g~~~  252 (307)
                      ...      ....+.+++|+|+++++++... ...|.++
T Consensus       223 ~~~------p~~~~~~p~dvA~~v~~l~~~~~~itG~~i  255 (259)
T 1oaa_A          223 KLK------SDGALVDCGTSAQKLLGLLQKDTFQSGAHV  255 (259)
T ss_dssp             HHH------HTTCSBCHHHHHHHHHHHHHHCCSCTTEEE
T ss_pred             Hhh------hcCCcCCHHHHHHHHHHHHhhccccCCcEE
Confidence            100      1234689999999999988642 2335443

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.91  E-value=3e-24  Score=179.09  Aligned_cols=214  Identities=13%  Similarity=0.082  Sum_probs=143.9

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEE-e--CCCCCCcccccCCCCCCCceEEEEcccCChhHHH-HHh---cCc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINAT-V--FPGSDSSHLFALPGAGDANLRVFEADVLDSGAVS-RAV---EGC   81 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~-~~~---~~~   81 (307)
                      +|+++||||+|+||+++++.|+++|+ +|+++ +  |+.+..+.+.... .   +....  |..+.+.+. ++.   .++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~r~~~~~~~~~~~~-~---~~~~~--~~~~v~~~~~~~~~~~g~i   73 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGY-TVVCHDASFADAAERQRFESEN-P---GTIAL--AEQKPERLVDATLQHGEAI   73 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHS-T---TEEEC--CCCCGGGHHHHHGGGSSCE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCcCCHHHHHHHHHHh-C---CCccc--CHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999 89998 5  8654443332211 0   22222  333333222 222   268


Q ss_pred             cEEEEeccCCCC---C----CCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           82 KGVFHVASPCTL---E----DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        82 d~vi~~a~~~~~---~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                      |+||||||....   .    ...++++..+++|+.++.++++++.    +.+.++||++||..+..+.+..         
T Consensus        74 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~---------  144 (244)
T 1zmo_A           74 DTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYN---------  144 (244)
T ss_dssp             EEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTC---------
T ss_pred             CEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCc---------
Confidence            999999997543   1    2234567899999999999998874    4566899999997765443332         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCC---CCCCcchHHHHHHHHc-CCCCCCCC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLM---QPYLNASCAVLQQLLQ-GSKDTQEY  223 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~---~~~~~~~~~~~~~~~~-~~~~~~~~  223 (307)
                                 ..|+.+|...+.+.+.++.+   .++++++++||.|.++..   .....  ......... ..+     
T Consensus       145 -----------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~p-----  206 (244)
T 1zmo_A          145 -----------PLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWEN--NPELRERVDRDVP-----  206 (244)
T ss_dssp             -----------TTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHH--CHHHHHHHHHHCT-----
T ss_pred             -----------hHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccc--hHHHHHHHhcCCC-----
Confidence                       57999999999998888766   489999999999988763   11000  011112111 111     


Q ss_pred             cccCcccHHHHHHHHHHhhcCCC--CCceEEecCCc
Q 021819          224 HWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNGI  257 (307)
Q Consensus       224 ~~~~~i~~~dva~~~~~~~~~~~--~~g~~~~~~~~  257 (307)
                       ...+.+++|+|+++++++....  ..|.++..+++
T Consensus       207 -~~r~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG  241 (244)
T 1zmo_A          207 -LGRLGRPDEMGALITFLASRRAAPIVGQFFAFTGG  241 (244)
T ss_dssp             -TCSCBCHHHHHHHHHHHHTTTTGGGTTCEEEESTT
T ss_pred             -CCCCcCHHHHHHHHHHHcCccccCccCCEEEeCCC
Confidence             2346799999999999987543  34665544433

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.90  E-value=1.5e-23  Score=189.13  Aligned_cols=218  Identities=18%  Similarity=0.120  Sum_probs=154.0

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +++++++||||+|+||+++++.|+++|+ +|++++|+..... +.......  ++.++.+|++|.++++++++       
T Consensus       211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga-~Vvl~~r~~~~~~-l~~~~~~~--~~~~~~~Dvtd~~~v~~~~~~~~~~~g  286 (454)
T 3u0b_A          211 LDGKVAVVTGAARGIGATIAEVFARDGA-TVVAIDVDGAAED-LKRVADKV--GGTALTLDVTADDAVDKITAHVTEHHG  286 (454)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECGGGHHH-HHHHHHHH--TCEEEECCTTSTTHHHHHHHHHHHHST
T ss_pred             CCCCEEEEeCCchHHHHHHHHHHHHCCC-EEEEEeCCccHHH-HHHHHHHc--CCeEEEEecCCHHHHHHHHHHHHHHcC
Confidence            3578999999999999999999999999 8998888543221 11110000  46789999999999888775       


Q ss_pred             C-ccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc----CCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 G-CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 ~-~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                      + +|+||||||.....    ...+.+...+++|+.++.++.+++...    +.++||++||+.+..+.++.         
T Consensus       287 ~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~---------  357 (454)
T 3u0b_A          287 GKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQ---------  357 (454)
T ss_dssp             TCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTC---------
T ss_pred             CCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCC---------
Confidence            3 89999999987542    233456789999999999999999775    56799999998887766553         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                                 ..|+.+|...+.+.+.++.+   .|+++++|+||.|.++.............   ....      ....
T Consensus       358 -----------~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~---~~~~------~l~r  417 (454)
T 3u0b_A          358 -----------TNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATREVG---RRLN------SLFQ  417 (454)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------CHHH---HHSB------TTSS
T ss_pred             -----------HHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHHHH---Hhhc------cccC
Confidence                       57999999888887777654   48999999999998876433211110111   1100      1234


Q ss_pred             cccHHHHHHHHHHhhcCC--CCCceEEecCCc
Q 021819          228 AVPVKDVAKAQVLLFESP--AASGRYLCTNGI  257 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~  257 (307)
                      +.+++|+|+++.+++...  ...|..+..+++
T Consensus       418 ~g~pedvA~~v~fL~s~~a~~itG~~i~vdGG  449 (454)
T 3u0b_A          418 GGQPVDVAELIAYFASPASNAVTGNTIRVCGQ  449 (454)
T ss_dssp             CBCHHHHHHHHHHHHCGGGTTCCSCEEEESSS
T ss_pred             CCCHHHHHHHHHHHhCCccCCCCCcEEEECCc
Confidence            568999999999988643  345665444433

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.90  E-value=1.6e-23  Score=181.08  Aligned_cols=201  Identities=18%  Similarity=0.112  Sum_probs=142.5

Q ss_pred             CccccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCC---------CCCCccc-ccCCCCCCCceEEEEcccCC
Q 021819            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP---------GSDSSHL-FALPGAGDANLRVFEADVLD   70 (307)
Q Consensus         1 m~~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~---------~~~~~~~-~~~~~~~~~~~~~i~~D~~d   70 (307)
                      |...+.+++|+++||||+|+||+++++.|+++|+ +|++.++.         ....+.. ..+...   .. ...+|++|
T Consensus         1 M~~~~~l~gk~~lVTGas~GIG~~~a~~La~~Ga-~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~---~~-~~~~D~~~   75 (319)
T 1gz6_A            1 MASPLRFDGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRR---GG-KAVANYDS   75 (319)
T ss_dssp             --CCCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHT---TC-EEEEECCC
T ss_pred             CCCCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCcccccccCCHHHHHHHHHHHHhh---CC-eEEEeCCC
Confidence            4444456788999999999999999999999999 88887653         2211111 111111   11 23479999


Q ss_pred             hhHHHHHhc-------CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCccee
Q 021819           71 SGAVSRAVE-------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAI  135 (307)
Q Consensus        71 ~~~~~~~~~-------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~  135 (307)
                      .+++.++++       ++|+||||||.....    ...+.++..+++|+.|+.++++++    ++.+.++||++||..+.
T Consensus        76 ~~~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~  155 (319)
T 1gz6_A           76 VEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGI  155 (319)
T ss_dssp             GGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhc
Confidence            887666543       689999999976542    233456889999999999998887    44566899999998776


Q ss_pred             ccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHH
Q 021819          136 VPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQ  212 (307)
Q Consensus       136 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~  212 (307)
                      ++.+..                    ..|+.+|...+.+.+.++.+   .|+++++++||.+ ++.....   ...    
T Consensus       156 ~~~~~~--------------------~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~---~~~----  207 (319)
T 1gz6_A          156 YGNFGQ--------------------ANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETV---MPE----  207 (319)
T ss_dssp             HCCTTC--------------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGG---SCH----
T ss_pred             cCCCCC--------------------HHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccccccc---CCh----
Confidence            654432                    57999999999999888766   4899999999987 4432110   000    


Q ss_pred             HHcCCCCCCCCcccCcccHHHHHHHHHHhhcCC
Q 021819          213 LLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (307)
Q Consensus       213 ~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~  245 (307)
                                 ....+++++|+|.++++++..+
T Consensus       208 -----------~~~~~~~p~dvA~~~~~l~s~~  229 (319)
T 1gz6_A          208 -----------DLVEALKPEYVAPLVLWLCHES  229 (319)
T ss_dssp             -----------HHHHHSCGGGTHHHHHHHTSTT
T ss_pred             -----------hhhccCCHHHHHHHHHHHhCch
Confidence                       1123468899999999988754

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.89  E-value=8.2e-23  Score=186.03  Aligned_cols=222  Identities=20%  Similarity=0.200  Sum_probs=160.0

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCc---cc-ccCCCCCCCceEEEEcccCChhHHHHHhcCc--
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS---HL-FALPGAGDANLRVFEADVLDSGAVSRAVEGC--   81 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~---~~-~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~--   81 (307)
                      .+++|+||||+|+||++++++|+++|+.+|+++.|+.....   .+ ..+...+. ++.++.+|++|.+++.++++++  
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~-~v~~~~~Dv~d~~~v~~~~~~i~~  303 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGA-RTTVAACDVTDRESVRELLGGIGD  303 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCC-EEEEEEeCCCCHHHHHHHHHHHHh
Confidence            46799999999999999999999999955999999764321   11 11111112 6889999999999999998765  


Q ss_pred             ----cEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCc
Q 021819           82 ----KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (307)
Q Consensus        82 ----d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~  153 (307)
                          |+|||+||.....    ...+.....+++|+.|+.++.+++.+.+.++||++||++++++.++.            
T Consensus       304 ~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g~------------  371 (486)
T 2fr1_A          304 DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGL------------  371 (486)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTC------------
T ss_pred             cCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCCC------------
Confidence                9999999976542    12334578899999999999999998888999999998877765553            


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHH
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKD  233 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d  233 (307)
                              ..|+.+|...+.+...+. ..|+++++|+||.+.+++....     ... .       .+......+++++|
T Consensus       372 --------~~Yaaaka~l~~la~~~~-~~gi~v~~i~pG~~~~~gm~~~-----~~~-~-------~~~~~g~~~i~~e~  429 (486)
T 2fr1_A          372 --------GGYAPGNAYLDGLAQQRR-SDGLPATAVAWGTWAGSGMAEG-----PVA-D-------RFRRHGVIEMPPET  429 (486)
T ss_dssp             --------TTTHHHHHHHHHHHHHHH-HTTCCCEEEEECCBC-------------------------CTTTTEECBCHHH
T ss_pred             --------HHHHHHHHHHHHHHHHHH-hcCCeEEEEECCeeCCCcccch-----hHH-H-------HHHhcCCCCCCHHH
Confidence                    579999999998876654 4599999999999987642211     000 0       01112345789999


Q ss_pred             HHHHHHHhhcCCCCCceEEecCCcccHHHHHHHHH
Q 021819          234 VAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVS  268 (307)
Q Consensus       234 va~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  268 (307)
                      +++++..++..+..  .+.+.  .+.+..+...+.
T Consensus       430 ~a~~l~~~l~~~~~--~~~v~--~~d~~~~~~~~~  460 (486)
T 2fr1_A          430 ACRALQNALDRAEV--CPIVI--DVRWDRFLLAYT  460 (486)
T ss_dssp             HHHHHHHHHHTTCS--SCEEC--EECHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCC--eEEEE--eCCHHHHhhhhc
Confidence            99999999987553  22222  245666655444

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.89  E-value=1.3e-21  Score=167.93  Aligned_cols=225  Identities=13%  Similarity=0.080  Sum_probs=148.1

Q ss_pred             cCCcEEEEeCCc--hhhHHHHHHHHHHCCCCeEEEEeCC-----------CCCCcccccCCCCC-CCceEEEEcc-----
Q 021819            7 KEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFP-----------GSDSSHLFALPGAG-DANLRVFEAD-----   67 (307)
Q Consensus         7 ~~~~~ilItGat--G~iG~~l~~~L~~~g~~~V~~~~r~-----------~~~~~~~~~~~~~~-~~~~~~i~~D-----   67 (307)
                      +++|+++||||+  |+||+++++.|+++|+ +|++++|+           ....+.+..+.... ......+.+|     
T Consensus         6 l~~k~~lVTGas~~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (297)
T 1d7o_A            6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGA-EILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN   84 (297)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCC-eEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccc
Confidence            457899999999  9999999999999999 88888753           22222222221100 0012333333     


Q ss_pred             ---c----CC--------hhHHHHHhc-------CccEEEEeccCCC--C----CCCCChhhhhhhhhHHHHHHHHHHHH
Q 021819           68 ---V----LD--------SGAVSRAVE-------GCKGVFHVASPCT--L----EDPVDPEKELILPAVQGTLNVLEAAK  119 (307)
Q Consensus        68 ---~----~d--------~~~~~~~~~-------~~d~vi~~a~~~~--~----~~~~~~~~~~~~~n~~~~~~l~~~~~  119 (307)
                         +    +|        +++++++++       ++|++|||||...  .    ....+++.+.+++|+.++.++++++.
T Consensus        85 ~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  164 (297)
T 1d7o_A           85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFL  164 (297)
T ss_dssp             GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred             hhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence               2    22        444555443       6899999998642  1    22334568899999999999999997


Q ss_pred             hc--CCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh----cCCcEEEEecCc
Q 021819          120 RF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK----HGVDVVAIHPAT  193 (307)
Q Consensus       120 ~~--~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~~i~~~ivrp~~  193 (307)
                      ..  ..++||++||..+..+.+..                   ...|+.+|...+.+.+.++.+    .|+++++|+||.
T Consensus       165 ~~m~~~g~iv~isS~~~~~~~~~~-------------------~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~  225 (297)
T 1d7o_A          165 PIMNPGGASISLTYIASERIIPGY-------------------GGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGP  225 (297)
T ss_dssp             GGEEEEEEEEEEECGGGTSCCTTC-------------------TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC
T ss_pred             HHhccCceEEEEeccccccCCCCc-------------------chHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccc
Confidence            64  12689999997765443221                   036999999999988877654    599999999999


Q ss_pred             eeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCcc
Q 021819          194 CLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIY  258 (307)
Q Consensus       194 v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~  258 (307)
                      |.++..... .....+........+      ...+.+++|+|+++++++...  ...|.++..++++
T Consensus       226 v~T~~~~~~-~~~~~~~~~~~~~~p------~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~  285 (297)
T 1d7o_A          226 LGSRAAKAI-GFIDTMIEYSYNNAP------IQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL  285 (297)
T ss_dssp             CBCCCSSCC-SHHHHHHHHHHHHSS------SCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             cccchhhhc-cccHHHHHHhhccCC------CCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            999875432 112222222222222      234679999999999888642  3356655444444

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.88  E-value=4.3e-22  Score=181.99  Aligned_cols=225  Identities=19%  Similarity=0.151  Sum_probs=162.6

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCc---cc-ccCCCCCCCceEEEEcccCChhHHHHHhcC--c
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS---HL-FALPGAGDANLRVFEADVLDSGAVSRAVEG--C   81 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~---~~-~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~--~   81 (307)
                      .+++|+||||+|+||++++++|.++|+.+|+++.|+.....   .+ ..+...+. ++.++.+|++|.+++.+++++  +
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~-~v~~~~~Dvtd~~~v~~~~~~~~l  336 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGC-EVVHAACDVAERDALAALVTAYPP  336 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTC-EEEEEECCSSCHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCC-EEEEEEeCCCCHHHHHHHHhcCCC
Confidence            46799999999999999999999999966888888754321   11 11111122 688999999999999999975  9


Q ss_pred             cEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc-CCcEEEEecCcceeccCCCCCCcccccCCCCchhh
Q 021819           82 KGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEY  156 (307)
Q Consensus        82 d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~  156 (307)
                      |+||||||.....    ...+.....+.+|+.|+.++.+++... +.++||++||+.++++.++.               
T Consensus       337 d~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g~---------------  401 (511)
T 2z5l_A          337 NAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAGQ---------------  401 (511)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTTB---------------
T ss_pred             cEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCCC---------------
Confidence            9999999986542    122345778899999999999999876 77899999998877665442               


Q ss_pred             hcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHH
Q 021819          157 CKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAK  236 (307)
Q Consensus       157 ~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~  236 (307)
                           ..|+.+|...+.+.+.+. ..|+++++|+||.+.+.+....  ...   ..+..        ....+++++|+++
T Consensus       402 -----~~YaaaKa~ld~la~~~~-~~gi~v~sv~pG~~~~tgm~~~--~~~---~~~~~--------~g~~~l~~e~~a~  462 (511)
T 2z5l_A          402 -----GAYAAANAALDALAERRR-AAGLPATSVAWGLWGGGGMAAG--AGE---ESLSR--------RGLRAMDPDAAVD  462 (511)
T ss_dssp             -----HHHHHHHHHHHHHHHHHH-TTTCCCEEEEECCBCSTTCCCC--HHH---HHHHH--------HTBCCBCHHHHHH
T ss_pred             -----HHHHHHHHHHHHHHHHHH-HcCCcEEEEECCcccCCccccc--ccH---HHHHh--------cCCCCCCHHHHHH
Confidence                 579999999999887653 5699999999998843222211  111   11111        1235689999999


Q ss_pred             HHHHhhcCCCCCceEEecCCcccHHHHHHHHHHhC
Q 021819          237 AQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLF  271 (307)
Q Consensus       237 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  271 (307)
                      ++..++..+..  ...+.  .+.|..+...+....
T Consensus       463 ~l~~al~~~~~--~v~v~--~~d~~~~~~~~~~~~  493 (511)
T 2z5l_A          463 ALLGAMGRNDV--CVTVV--DVDWERFAPATNAIR  493 (511)
T ss_dssp             HHHHHHHHTCS--EEEEC--CBCHHHHHHHHHHHS
T ss_pred             HHHHHHhCCCC--EEEEE--eCCHHHHHhhhcccC
Confidence            99999986543  22333  345666666555443

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.87  E-value=1.8e-21  Score=176.75  Aligned_cols=205  Identities=18%  Similarity=0.161  Sum_probs=154.1

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccc----ccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL----FALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~----~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      +++++||||+|+||++++++|.++|+.+|+++.|+.......    ..+...+. ++.++.+|++|.+++.++++     
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~-~v~~~~~Dvtd~~~v~~~~~~i~~~  317 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGV-RVTIAACDAADREALAALLAELPED  317 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHTCCTT
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCC-eEEEEEccCCCHHHHHHHHHHHHHh
Confidence            379999999999999999999999987788888864332221    11111122 78999999999999999886     


Q ss_pred             -CccEEEEeccCC-CC----CCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCc
Q 021819           80 -GCKGVFHVASPC-TL----EDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (307)
Q Consensus        80 -~~d~vi~~a~~~-~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~  153 (307)
                       .+|+||||||.. ..    ....+.+...+++|+.|+.++.+++...+.++||++||+.++.+.++.            
T Consensus       318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~g~------------  385 (496)
T 3mje_A          318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSGGQ------------  385 (496)
T ss_dssp             SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCTTC------------
T ss_pred             CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCCCc------------
Confidence             379999999986 32    122334578999999999999999999888999999998887776553            


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHH
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKD  233 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d  233 (307)
                              ..|+.+|...+.+.+.+. ..|+++++|+||.+.+.+......    ....+..        .....+++++
T Consensus       386 --------~~YaAaKa~ldala~~~~-~~Gi~v~sV~pG~w~~~gm~~~~~----~~~~l~~--------~g~~~l~pe~  444 (496)
T 3mje_A          386 --------PGYAAANAYLDALAEHRR-SLGLTASSVAWGTWGEVGMATDPE----VHDRLVR--------QGVLAMEPEH  444 (496)
T ss_dssp             --------HHHHHHHHHHHHHHHHHH-HTTCCCEEEEECEESSSCC----------CHHHHH--------TTEEEECHHH
T ss_pred             --------HHHHHHHHHHHHHHHHHH-hcCCeEEEEECCcccCCccccChH----HHHHHHh--------cCCCCCCHHH
Confidence                    579999999998887654 469999999999997765432211    1111111        1233579999


Q ss_pred             HHHHHHHhhcCCCC
Q 021819          234 VAKAQVLLFESPAA  247 (307)
Q Consensus       234 va~~~~~~~~~~~~  247 (307)
                      .++++..++..+..
T Consensus       445 ~~~~l~~~l~~~~~  458 (496)
T 3mje_A          445 ALGALDQMLENDDT  458 (496)
T ss_dssp             HHHHHHHHHHHTCS
T ss_pred             HHHHHHHHHcCCCc
Confidence            99999999987654

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.87  E-value=9.9e-21  Score=164.58  Aligned_cols=169  Identities=10%  Similarity=0.050  Sum_probs=122.1

Q ss_pred             CcEEEEeCCch--hhHHHHHHHHHHCCCCeEEEEeCCC---------CCCcccc---cCCCCCCCceEEEEcccCCh--h
Q 021819            9 EETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPG---------SDSSHLF---ALPGAGDANLRVFEADVLDS--G   72 (307)
Q Consensus         9 ~~~ilItGatG--~iG~~l~~~L~~~g~~~V~~~~r~~---------~~~~~~~---~~~~~~~~~~~~i~~D~~d~--~   72 (307)
                      +|+++||||++  +||++++++|+++|+ +|++..|++         ...+...   .........+..+++|+++.  +
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~-~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNV-KIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            57999999975  999999999999999 888665432         1111111   11111111478889999877  6


Q ss_pred             ------------------HHHHHhc-------CccEEEEeccCCC--C----CCCCChhhhhhhhhHHHHHHHHHHHHhc
Q 021819           73 ------------------AVSRAVE-------GCKGVFHVASPCT--L----EDPVDPEKELILPAVQGTLNVLEAAKRF  121 (307)
Q Consensus        73 ------------------~~~~~~~-------~~d~vi~~a~~~~--~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~  121 (307)
                                        ++.++++       .+|++|||||...  .    ....+.+...+++|+.++.++.+++...
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              6666554       5799999999642  1    2233456899999999999999998654


Q ss_pred             C--CcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCc-cHHHHHHHHHHHHHHHHHh----cCCcEEEEecCce
Q 021819          122 G--VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK-WYPVSKTLAEKAAWEFAEK----HGVDVVAIHPATC  194 (307)
Q Consensus       122 ~--~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~-~y~~sK~~~e~~~~~~~~~----~~i~~~ivrp~~v  194 (307)
                      -  .++||++||..+..+.+..                    . .|+.+|...+.+.+.++.+    .++++++|.||.|
T Consensus       161 m~~~g~Iv~isS~~~~~~~~~~--------------------~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v  220 (329)
T 3lt0_A          161 MKPQSSIISLTYHASQKVVPGY--------------------GGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPL  220 (329)
T ss_dssp             EEEEEEEEEEECGGGTSCCTTC--------------------TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_pred             HhhCCeEEEEeCccccCCCCcc--------------------hHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEeccee
Confidence            1  1689999997765544332                    3 6999998888887766544    5899999999999


Q ss_pred             eCCC
Q 021819          195 LGPL  198 (307)
Q Consensus       195 ~g~~  198 (307)
                      .++.
T Consensus       221 ~T~~  224 (329)
T 3lt0_A          221 KSRA  224 (329)
T ss_dssp             CCHH
T ss_pred             echh
Confidence            8764

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.86  E-value=4.1e-21  Score=166.07  Aligned_cols=227  Identities=16%  Similarity=0.089  Sum_probs=145.8

Q ss_pred             cCCcEEEEeCC--chhhHHHHHHHHHHCCCCeEEEEeCCC-----------CCCcccccCCCCC-CCceEEEEcc-----
Q 021819            7 KEEETVCVTGA--NGFIGTWLVKTLLDNNYTSINATVFPG-----------SDSSHLFALPGAG-DANLRVFEAD-----   67 (307)
Q Consensus         7 ~~~~~ilItGa--tG~iG~~l~~~L~~~g~~~V~~~~r~~-----------~~~~~~~~~~~~~-~~~~~~i~~D-----   67 (307)
                      +++|+++||||  +|+||+++++.|+++|+ +|++++|++           ...+.+..+.... ...+..+.+|     
T Consensus         7 l~gk~~lVTGa~~s~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~   85 (315)
T 2o2s_A            7 LRGQTAFVAGVADSHGYGWAIAKHLASAGA-RVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDK   85 (315)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHTTTC-EEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSS
T ss_pred             CCCCEEEEeCCCCCCChHHHHHHHHHHCCC-EEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccc
Confidence            56789999999  89999999999999999 898887642           1111122221100 0012344443     


Q ss_pred             -------cCC--------hhHHHHHhc-------CccEEEEeccCCC--C----CCCCChhhhhhhhhHHHHHHHHHHHH
Q 021819           68 -------VLD--------SGAVSRAVE-------GCKGVFHVASPCT--L----EDPVDPEKELILPAVQGTLNVLEAAK  119 (307)
Q Consensus        68 -------~~d--------~~~~~~~~~-------~~d~vi~~a~~~~--~----~~~~~~~~~~~~~n~~~~~~l~~~~~  119 (307)
                             ++|        +++++++++       ++|++|||||...  .    ....+++...+++|+.++.++++++.
T Consensus        86 ~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  165 (315)
T 2o2s_A           86 PEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFG  165 (315)
T ss_dssp             TTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHS
T ss_pred             cchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence                   332        445555443       6899999999652  1    22334568899999999999999996


Q ss_pred             hc--CCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh----cCCcEEEEecCc
Q 021819          120 RF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK----HGVDVVAIHPAT  193 (307)
Q Consensus       120 ~~--~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~~i~~~ivrp~~  193 (307)
                      ..  ..++||++||..+..+.+..                   ...|+.+|...+.+.+.++.+    .|+++++|+||.
T Consensus       166 ~~m~~~g~Iv~isS~~~~~~~~~~-------------------~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~  226 (315)
T 2o2s_A          166 PIMNEGGSAVTLSYLAAERVVPGY-------------------GGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGP  226 (315)
T ss_dssp             TTEEEEEEEEEEEEGGGTSCCTTC-------------------CTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECC
T ss_pred             HHHhcCCEEEEEecccccccCCCc-------------------cHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEeccc
Confidence            54  12689999997764433221                   036999999999888877654    589999999999


Q ss_pred             eeCCCCCCCC-----cchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCccc
Q 021819          194 CLGPLMQPYL-----NASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIYQ  259 (307)
Q Consensus       194 v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~~  259 (307)
                      |.++......     .....+........+      ...+.+++|+|+++++++...  ...|.++..+++++
T Consensus       227 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  293 (315)
T 2o2s_A          227 LKSRAASAIGKSGEKSFIDYAIDYSYNNAP------LRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLH  293 (315)
T ss_dssp             CCCHHHHHTTCSSSSCHHHHHHHHHHHHSS------SCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             ccchhhhhccccccchhHHHHHHHHhccCC------CCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCee
Confidence            9876321100     011111111111111      234579999999999988642  34577766666543

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.86  E-value=3.7e-21  Score=166.64  Aligned_cols=231  Identities=14%  Similarity=0.078  Sum_probs=125.5

Q ss_pred             cCCcEEEEeCC--chhhHHHHHHHHHHCCCCeEEEEeCCC-----------CCCccc------------ccCCCCCC--C
Q 021819            7 KEEETVCVTGA--NGFIGTWLVKTLLDNNYTSINATVFPG-----------SDSSHL------------FALPGAGD--A   59 (307)
Q Consensus         7 ~~~~~ilItGa--tG~iG~~l~~~L~~~g~~~V~~~~r~~-----------~~~~~~------------~~~~~~~~--~   59 (307)
                      +++|+++||||  +++||+++++.|+++|+ +|++.+|++           ...+..            ..+.....  .
T Consensus         7 l~~k~~lVTGa~~s~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (319)
T 2ptg_A            7 LRGKTAFVAGVADSNGYGWAICKLLRAAGA-RVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLV   85 (319)
T ss_dssp             CTTCEEEEECCCCTTSHHHHHHHHHHHTTC-EEEEEECHHHHHHHHC--------------------------------C
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHCCC-EEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccc
Confidence            45789999999  89999999999999999 888887631           111110            00000000  0


Q ss_pred             ceEEEEcc------------cCC--------hhHHHHHhc-------CccEEEEeccCCC--C----CCCCChhhhhhhh
Q 021819           60 NLRVFEAD------------VLD--------SGAVSRAVE-------GCKGVFHVASPCT--L----EDPVDPEKELILP  106 (307)
Q Consensus        60 ~~~~i~~D------------~~d--------~~~~~~~~~-------~~d~vi~~a~~~~--~----~~~~~~~~~~~~~  106 (307)
                      ....+.+|            ++|        +++++++++       ++|++|||||...  .    ....+.+...+++
T Consensus        86 ~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~v  165 (319)
T 2ptg_A           86 FDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSS  165 (319)
T ss_dssp             CSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHH
T ss_pred             ccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhH
Confidence            02444444            232        234554443       6899999999642  1    2233456889999


Q ss_pred             hHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---
Q 021819          107 AVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---  181 (307)
Q Consensus       107 n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---  181 (307)
                      |+.++.++++++...  ..++||++||..+..+.+..            .       ..|+.+|...+.+.+.++.+   
T Consensus       166 N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~------------~-------~~Y~asKaal~~l~~~la~el~~  226 (319)
T 2ptg_A          166 SSYSFVSLLQHFLPLMKEGGSALALSYIASEKVIPGY------------G-------GGMSSAKAALESDCRTLAFEAGR  226 (319)
T ss_dssp             HTHHHHHHHHHHGGGEEEEEEEEEEEECC-------------------------------------THHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHhcCceEEEEeccccccccCcc------------c-------hhhHHHHHHHHHHHHHHHHHhcc
Confidence            999999999999764  12689999997765443221            0       24777777777666655543   


Q ss_pred             -cCCcEEEEecCceeCCCCCCCCcc-hHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcC--CCCCceEEecCCc
Q 021819          182 -HGVDVVAIHPATCLGPLMQPYLNA-SCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFES--PAASGRYLCTNGI  257 (307)
Q Consensus       182 -~~i~~~ivrp~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~  257 (307)
                       .|+++++|+||.|.++........ ...+.......  ..-......+.+++|+|+++++++..  ....|.++..+++
T Consensus       227 ~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG  304 (319)
T 2ptg_A          227 ARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDY--SEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNG  304 (319)
T ss_dssp             HHCCEEEEEEECCCC---------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ccCeeEEEEeeCCccChhhhhcccccchhhHHHHHHH--HhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence             589999999999988753321000 00000000000  00000123467999999999998864  2345776666655


Q ss_pred             cc
Q 021819          258 YQ  259 (307)
Q Consensus       258 ~~  259 (307)
                      ++
T Consensus       305 ~~  306 (319)
T 2ptg_A          305 LH  306 (319)
T ss_dssp             CT
T ss_pred             ce
Confidence            44

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.85  E-value=5.1e-21  Score=175.58  Aligned_cols=223  Identities=18%  Similarity=0.178  Sum_probs=157.9

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEE-eCCCCC-------------Cccc-ccCCCCCCCceEEEEcccCChh
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSD-------------SSHL-FALPGAGDANLRVFEADVLDSG   72 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~-~r~~~~-------------~~~~-~~~~~~~~~~~~~i~~D~~d~~   72 (307)
                      ++++++||||+|+||.+++++|.++|+..|+.+ .|+...             .+.+ ..+...+. ++.++.+|++|.+
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-~v~~~~~Dvtd~~  328 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGA-TATVVTCDLTDAE  328 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTC-EEEEEECCTTSHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCC-EEEEEECCCCCHH
Confidence            468999999999999999999999999557777 787432             1111 11111122 6889999999999


Q ss_pred             HHHHHhcC------ccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhcC-----CcEEEEecCcceecc
Q 021819           73 AVSRAVEG------CKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRFG-----VRRVVVTSSISAIVP  137 (307)
Q Consensus        73 ~~~~~~~~------~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~v~iSS~~~~~~  137 (307)
                      ++.++++.      +|+||||||.....    ...+.+...+++|+.|+.++.+++....     .++||++||++++.+
T Consensus       329 ~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g  408 (525)
T 3qp9_A          329 AAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWG  408 (525)
T ss_dssp             HHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTC
T ss_pred             HHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCC
Confidence            99999874      69999999986542    2233457899999999999999997765     789999999888777


Q ss_pred             CCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCC
Q 021819          138 NPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS  217 (307)
Q Consensus       138 ~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~  217 (307)
                      .++.                    ..|+.+|...+.+...+. ..|+++++|+||.+-++....  .   .....+..  
T Consensus       409 ~~g~--------------------~~YaaaKa~l~~lA~~~~-~~gi~v~sI~pG~~~tgm~~~--~---~~~~~~~~--  460 (525)
T 3qp9_A          409 GAGQ--------------------GAYAAGTAFLDALAGQHR-ADGPTVTSVAWSPWEGSRVTE--G---ATGERLRR--  460 (525)
T ss_dssp             CTTC--------------------HHHHHHHHHHHHHHTSCC-SSCCEEEEEEECCBTTSGGGS--S---HHHHHHHH--
T ss_pred             CCCC--------------------HHHHHHHHHHHHHHHHHH-hCCCCEEEEECCccccccccc--h---hhHHHHHh--
Confidence            6553                    579999999998865442 359999999999994333211  1   11111111  


Q ss_pred             CCCCCCcccCcccHHHHHHHHHHhhcCCCCCceEEecCCcccHHHHHHHHHH
Q 021819          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSK  269 (307)
Q Consensus       218 ~~~~~~~~~~~i~~~dva~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  269 (307)
                            .....++++++++++..++..+..  ...+  ..+.|..+...+..
T Consensus       461 ------~g~~~l~pee~a~~l~~~l~~~~~--~v~v--~~~dw~~~~~~~~~  502 (525)
T 3qp9_A          461 ------LGLRPLAPATALTALDTALGHGDT--AVTI--ADVDWSSFAPGFTT  502 (525)
T ss_dssp             ------TTBCCBCHHHHHHHHHHHHHHTCS--EEEE--CCBCHHHHHHHHHS
T ss_pred             ------cCCCCCCHHHHHHHHHHHHhCCCC--eEEE--EeCCHHHHHhhccc
Confidence                  123468999999999999987543  1222  23455555555443

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.84  E-value=1.1e-20  Score=176.84  Aligned_cols=196  Identities=17%  Similarity=0.083  Sum_probs=136.5

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeC---------CCCCCccccc-CCCCCCCceEEEEcccCChhHHH
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF---------PGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVS   75 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r---------~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~   75 (307)
                      ++++|+++||||+|+||+++++.|+++|+ +|++.+|         +....+.+.. +...   .. .+.+|++|.+++.
T Consensus        16 ~l~gk~~lVTGas~GIG~aiA~~La~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~---~~-~~~~D~~d~~~~~   90 (613)
T 3oml_A           16 RYDGRVAVVTGAGAGLGREYALLFAERGA-KVVVNDLGGTHSGDGASQRAADIVVDEIRKA---GG-EAVADYNSVIDGA   90 (613)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEC--------------CHHHHHHHHHHT---TC-CEEECCCCGGGHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcccccccCCHHHHHHHHHHHHHh---CC-eEEEEeCCHHHHH
Confidence            45689999999999999999999999999 8988877         2222222211 1111   11 1247999998888


Q ss_pred             HHhc-------CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCC
Q 021819           76 RAVE-------GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPG  140 (307)
Q Consensus        76 ~~~~-------~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~  140 (307)
                      ++++       .+|++|||||.....    ...+++...+++|+.|+.++++++    ++.+.++||++||.++.++.++
T Consensus        91 ~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~  170 (613)
T 3oml_A           91 KVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFG  170 (613)
T ss_dssp             HHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCC
Confidence            7776       579999999986542    233456899999999999999988    5556689999999888776554


Q ss_pred             CCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCC
Q 021819          141 WKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS  217 (307)
Q Consensus       141 ~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~  217 (307)
                      .                    ..|+.+|...+.+.+.++.+   .||++++|.|+.+ ++.......             
T Consensus       171 ~--------------------~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~-------------  216 (613)
T 3oml_A          171 Q--------------------VNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILP-------------  216 (613)
T ss_dssp             C--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCC-------------
T ss_pred             C--------------------hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccc-------------
Confidence            3                    56999999999888887766   4899999999964 222111100             


Q ss_pred             CCCCCCcccCcccHHHHHHHHHHhhcCC
Q 021819          218 KDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (307)
Q Consensus       218 ~~~~~~~~~~~i~~~dva~~~~~~~~~~  245 (307)
                           ......+.++|+|.++++++...
T Consensus       217 -----~~~~~~~~pedvA~~v~~L~s~~  239 (613)
T 3oml_A          217 -----DILFNELKPKLIAPVVAYLCHES  239 (613)
T ss_dssp             -----HHHHTTCCGGGTHHHHHHTTSTT
T ss_pred             -----hhhhhcCCHHHHHHHHHHhcCCC
Confidence                 01223468899999999888654

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.81  E-value=1.7e-20  Score=162.79  Aligned_cols=173  Identities=15%  Similarity=0.131  Sum_probs=124.6

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCC------eEEEEeCCCC--CCcc-cccCCCCCCCceEEEEcccCChhHHHHHhc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYT------SINATVFPGS--DSSH-LFALPGAGDANLRVFEADVLDSGAVSRAVE   79 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~------~V~~~~r~~~--~~~~-~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~   79 (307)
                      .|||+||||+||||++|+..|+++|+.      +|+++++.+.  .... ...+...   .+.++ +|+.+.+++.++++
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~---~~~~~-~di~~~~~~~~a~~   79 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC---AFPLL-AGLEATDDPKVAFK   79 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT---TCTTE-EEEEEESCHHHHTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc---ccccc-CCeEeccChHHHhC
Confidence            358999999999999999999998852      7888887531  1110 0011000   12233 57777667788889


Q ss_pred             CccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcC-Cc-EEEEecCcceeccCCCCCCcccc-cCC-CCchh
Q 021819           80 GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VR-RVVVTSSISAIVPNPGWKGKVFD-ETS-WTDLE  155 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~iSS~~~~~~~~~~~~~~~~-E~~-~~~~~  155 (307)
                      ++|+|||+||.....  .....+.++.|+.++.+++++|++++ .+ +++++|+.....       .++. |.. ...|.
T Consensus        80 ~~D~Vih~Ag~~~~~--~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~-------~~~~~~~~~~~~p~  150 (327)
T 1y7t_A           80 DADYALLVGAAPRKA--GMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTN-------ALIAYKNAPGLNPR  150 (327)
T ss_dssp             TCSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHH-------HHHHHHTCTTSCGG
T ss_pred             CCCEEEECCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhh-------HHHHHHHcCCCChh
Confidence            999999999976542  24567899999999999999999985 54 788877632110       1112 221 11222


Q ss_pred             hhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCC
Q 021819          156 YCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (307)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~  200 (307)
                            .+|+.+|..+|++...+++..|++++++||++|||+...
T Consensus       151 ------~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~  189 (327)
T 1y7t_A          151 ------NFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS  189 (327)
T ss_dssp             ------GEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred             ------heeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCC
Confidence                  579999999999999888889999999999999998754

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.81  E-value=1.1e-18  Score=162.70  Aligned_cols=227  Identities=17%  Similarity=0.119  Sum_probs=150.7

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEccc-CChhHHHH-H---hcC
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV-LDSGAVSR-A---VEG   80 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~-~d~~~~~~-~---~~~   80 (307)
                      .+++|+++||||+++||+++++.|+++|+ +|++.+|+.. .+...++...+. ++..+.+|+ ++.+.+.+ +   +..
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga-~Vv~~~~~~~-~~~~~~i~~~g~-~~~~~~~Dv~~~~~~~~~~~~~~~G~  395 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYGA-KVVVNDFKDA-TKTVDEIKAAGG-EAWPDQHDVAKDSEAIIKNVIDKYGT  395 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCC-HHHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHHHHHSC
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCCC-EEEEEeCccH-HHHHHHHHhcCC-eEEEEEcChHHHHHHHHHHHHHhcCC
Confidence            35678999999999999999999999999 8888776321 111111111111 566778898 55443322 2   236


Q ss_pred             ccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           81 CKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        81 ~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      +|++|||||....    ....+++...+++|+.|+.++.+++.    +.+.++||++||..+..+.++.           
T Consensus       396 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~-----------  464 (604)
T 2et6_A          396 IDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQ-----------  464 (604)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTB-----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCC-----------
Confidence            8999999997643    22344678999999999999888873    4455799999998776654442           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcc
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (307)
                               ..|+.+|.....+.+.++.+   +||++++|.||. .++.....       ...           ......
T Consensus       465 ---------~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~-------~~~-----------~~~~~~  516 (604)
T 2et6_A          465 ---------ANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSI-------MRE-----------QDKNLY  516 (604)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC---------------------------CCSS
T ss_pred             ---------hhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCcccccc-------Cch-----------hhccCC
Confidence                     45888888777777766655   589999999983 44331110       000           012345


Q ss_pred             cHHHHHHHHHHhhcCCC-CCceEE-ecC------------------CcccHHHHHHHHHHhCCCCC
Q 021819          230 PVKDVAKAQVLLFESPA-ASGRYL-CTN------------------GIYQFGDFAERVSKLFPEFP  275 (307)
Q Consensus       230 ~~~dva~~~~~~~~~~~-~~g~~~-~~~------------------~~~~~~~~~~~~~~~~~~~~  275 (307)
                      .++|+|.++++++.... ..|..+ +.+                  ..++..++.+.+.+.. ...
T Consensus       517 ~pe~vA~~v~~L~s~~~~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~  581 (604)
T 2et6_A          517 HADQVAPLLVYLGTDDVPVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEIT-DFT  581 (604)
T ss_dssp             CGGGTHHHHHHTTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHT-CCS
T ss_pred             CHHHHHHHHHHHhCCccCCCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHh-ccc
Confidence            89999999998875432 345322 221                  2357788888888777 443

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.80  E-value=1.8e-19  Score=156.92  Aligned_cols=267  Identities=9%  Similarity=0.027  Sum_probs=168.3

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHH-CCCCeEEEEeCCCCCCcc------------cc-cCCCCCCCceEEEEcccCChhH
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLD-NNYTSINATVFPGSDSSH------------LF-ALPGAGDANLRVFEADVLDSGA   73 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~-~g~~~V~~~~r~~~~~~~------------~~-~~~~~~~~~~~~i~~D~~d~~~   73 (307)
                      .+|+++||||+++||+++++.|++ .|+ +|++.+|+......            +. .....+. .+..+.+|++|+++
T Consensus        46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA-~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~-~a~~i~~Dvtd~~~  123 (405)
T 3zu3_A           46 GPKRVLVIGASTGYGLAARITAAFGCGA-DTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGL-YAKSINGDAFSDEI  123 (405)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTC-CEEEEESCTTSHHH
T ss_pred             CCCEEEEeCcchHHHHHHHHHHHHhcCC-EEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCC-ceEEEECCCCCHHH
Confidence            478999999999999999999999 999 88888886544221            11 1111122 67889999999998


Q ss_pred             HHHHhc-------CccEEEEeccCCC--------------------------------------CCCCCChhhhhhhhhH
Q 021819           74 VSRAVE-------GCKGVFHVASPCT--------------------------------------LEDPVDPEKELILPAV  108 (307)
Q Consensus        74 ~~~~~~-------~~d~vi~~a~~~~--------------------------------------~~~~~~~~~~~~~~n~  108 (307)
                      ++++++       ++|++|||||...                                      .....+++...+++|.
T Consensus       124 v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~  203 (405)
T 3zu3_A          124 KQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMG  203 (405)
T ss_dssp             HHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhc
Confidence            887775       5799999998741                                      1122345678888888


Q ss_pred             HHHH-HHHHHHHhc----CCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh--
Q 021819          109 QGTL-NVLEAAKRF----GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK--  181 (307)
Q Consensus       109 ~~~~-~l~~~~~~~----~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~--  181 (307)
                      .+.. .+++++...    +.+++|++||+++..+.+..                  ....|+.+|...+.+.+.++.+  
T Consensus       204 ~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~------------------~~~aY~AaKaal~~ltrsLA~Ela  265 (405)
T 3zu3_A          204 GEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIY------------------WNGSIGAAKKDLDQKVLAIRESLA  265 (405)
T ss_dssp             SHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTT------------------TTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCc------------------cchHHHHHHHHHHHHHHHHHHHhC
Confidence            7776 566655432    12689999998765443321                  0145888888888777766654  


Q ss_pred             -c-CCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCCCCCceEE-ecCC-c
Q 021819          182 -H-GVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYL-CTNG-I  257 (307)
Q Consensus       182 -~-~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~~~g~~~-~~~~-~  257 (307)
                       . |++++++.||.|.++...... ..+........        .+..+-.++||++++.++... ...|.-. +.++ .
T Consensus       266 ~~~GIRVNaVaPG~i~T~~s~~ip-~~p~y~~~l~~--------~mkr~G~~Ed~a~~i~~L~sd-~l~~~~~~~D~~~~  335 (405)
T 3zu3_A          266 AHGGGDARVSVLKAVVSQASSAIP-MMPLYLSLLFK--------VMKEKGTHEGCIEQVYSLYKD-SLCGDSPHMDQEGR  335 (405)
T ss_dssp             TTTSCEEEEEECCCCCCHHHHTST-THHHHHHHHHH--------HHHHHTCCCCHHHHHHHHHHH-TTSSSCCCBCTTSC
T ss_pred             cccCeEEEEEEeCCCcCchhhcCC-CCcHHHHHHHH--------HHhcCCCcHHHHHHHHHHHhc-cccCCCCCcCCCcC
Confidence             5 899999999999887543321 11111111111        123345779999999888865 2223222 2222 1


Q ss_pred             c--cHHHHH----HHHHHhCC---CCCCCccccCCchHHHHHHHhhhcccccCccccc
Q 021819          258 Y--QFGDFA----ERVSKLFP---EFPVHRFVFQSPLRFILWLAIILPHEKNGVTYSI  306 (307)
Q Consensus       258 ~--~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (307)
                      +  .-.|+-    ..+.+..+   .-.+.  .......+-..|..+++.+-.|++|+-
T Consensus       336 ~r~d~~e~~~~~q~~~~~~~~~~~~~~~~--~~~d~~~~~~~f~~~~gf~~~~vdy~~  391 (405)
T 3zu3_A          336 LRADYKELDPEVQNQVQQLWDQVTNDNIY--QLTDFVGYKSEFLNLFGFGIDGVDYDA  391 (405)
T ss_dssp             EECCHHHHCHHHHHHHHHHHHHCCTTTHH--HHCCHHHHHHHHHHHTTCSCTTCCTTS
T ss_pred             CCCchhhcCHHHHHHHHHHHHHhcccccc--ccccHHHHHHHHHHhcCCCCCCCcCCC
Confidence            2  222232    22222221   11111  122345566688999999999999974

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.79  E-value=3.3e-18  Score=150.34  Aligned_cols=270  Identities=13%  Similarity=0.078  Sum_probs=168.3

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHH-CCCCeEEEEeCCCCCCcc------------c-ccCCCCCCCceEEEEcccCChhH
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLD-NNYTSINATVFPGSDSSH------------L-FALPGAGDANLRVFEADVLDSGA   73 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~-~g~~~V~~~~r~~~~~~~------------~-~~~~~~~~~~~~~i~~D~~d~~~   73 (307)
                      .+|++|||||+++||+++++.|++ .|+ +|++++|+......            + ......+. .+..+.+|++|+++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA-~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~-~a~~i~~Dvtd~~~  137 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGA-DTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGL-YSKSINGDAFSDAA  137 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTC-CEEEEESCTTSHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCC-cEEEEEecCCCHHH
Confidence            368999999999999999999999 999 89888886554321            1 11111122 67889999999988


Q ss_pred             HHHHhc--------CccEEEEeccCC-------------CC-------------------------CCCCChhhhhhhhh
Q 021819           74 VSRAVE--------GCKGVFHVASPC-------------TL-------------------------EDPVDPEKELILPA  107 (307)
Q Consensus        74 ~~~~~~--------~~d~vi~~a~~~-------------~~-------------------------~~~~~~~~~~~~~n  107 (307)
                      ++++++        ++|++|||||..             ..                         ....+++...+++|
T Consensus       138 v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn  217 (422)
T 3s8m_A          138 RAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVM  217 (422)
T ss_dssp             HHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhh
Confidence            776653        579999999862             11                         11223456677777


Q ss_pred             HHHHH-HHHHHHHhcC----CcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh-
Q 021819          108 VQGTL-NVLEAAKRFG----VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-  181 (307)
Q Consensus       108 ~~~~~-~l~~~~~~~~----~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-  181 (307)
                      ..+.. .+++++....    .+++|++||+++..+.+.               |   ....|+.+|...+.+.+.++.+ 
T Consensus       218 ~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~---------------~---~~~aY~ASKaAl~~lTrsLA~El  279 (422)
T 3s8m_A          218 GGQDWELWIDALEGAGVLADGARSVAFSYIGTEITWPI---------------Y---WHGALGKAKVDLDRTAQRLNARL  279 (422)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHH---------------H---TSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCC---------------c---cchHHHHHHHHHHHHHHHHHHHh
Confidence            66664 6666654332    258999999776432211               1   1145888888888887776655 


Q ss_pred             --cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCCCC--CceEE-ecCC
Q 021819          182 --HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAA--SGRYL-CTNG  256 (307)
Q Consensus       182 --~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~~--~g~~~-~~~~  256 (307)
                        .|+++++|.||.|.++...... ...........        ....+..++|||+++.+++...--  .|... +.++
T Consensus       280 a~~GIRVNaVaPG~i~T~~~~~ip-~~~~~~~~~~~--------~m~r~G~pEdva~~v~~L~sd~ly~~~~~~~~~d~~  350 (422)
T 3s8m_A          280 AKHGGGANVAVLKSVVTQASAAIP-VMPLYISMVYK--------IMKEKGLHEGTIEQLDRLFRERLYRQDGQPAEVDEQ  350 (422)
T ss_dssp             HTTTCEEEEEEECCCCCTTGGGST-HHHHHHHHHHH--------HHHHTTCCCCHHHHHHHHHHHTTTCTTCCCCCCCTT
T ss_pred             CccCEEEEEEEcCCCcChhhhcCC-CChHHHHHHHh--------hhcCCcChHHHHHHHHHHhcchhhccCCCCcccCCC
Confidence              4899999999999988754331 11111111111        122345679999999888854311  12211 2221


Q ss_pred             c------ccH-HHHHHHHHHhCCCCCCCcc-ccCCchHHHHHHHhhhcccccCccccc
Q 021819          257 I------YQF-GDFAERVSKLFPEFPVHRF-VFQSPLRFILWLAIILPHEKNGVTYSI  306 (307)
Q Consensus       257 ~------~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (307)
                      .      +.+ .++-..+.+..+...-... .......+-..|..+++.+-.|++|+-
T Consensus       351 ~~~r~d~~e~~~~~q~~~~~~~~~~~~~~~~~~~d~~~~~~~f~~~~gf~~~~~dy~~  408 (422)
T 3s8m_A          351 NRLRLDDWELRDDVQDACKALWPQVTTENLFELTDYAGYKHEFLKLFGFGRTDVDYDA  408 (422)
T ss_dssp             SCEESCTTTTSHHHHHHHHHHGGGCCGGGHHHHSCHHHHHHHHHHHTTCSCSSSCTTS
T ss_pred             CCCccchhhCCHHHHHHHHHHHHHhccccccccccHHHHHHHHHHhcCCCCCCCccCC
Confidence            1      111 2444455555533221111 122345566688999999999999974

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.78  E-value=1.2e-18  Score=154.37  Aligned_cols=272  Identities=10%  Similarity=0.009  Sum_probs=167.7

Q ss_pred             cCCcEEEEeCCchhhHHH--HHHHHHHCCCCeEEEEeCCCCCCc------------ccccCCCCCCCceEEEEcccCChh
Q 021819            7 KEEETVCVTGANGFIGTW--LVKTLLDNNYTSINATVFPGSDSS------------HLFALPGAGDANLRVFEADVLDSG   72 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~--l~~~L~~~g~~~V~~~~r~~~~~~------------~~~~~~~~~~~~~~~i~~D~~d~~   72 (307)
                      ..+|+++||||+++||++  +++.|.++|+ +|++++|+.....            .+..+.......+..+.+|++|++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~  136 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEA-HTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNE  136 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCC-EEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCC-EEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHH
Confidence            457899999999999999  9999999999 8988888654321            111111111126889999999998


Q ss_pred             HHHHHhc-------CccEEEEeccCC-------------CC-------------------------CCCCChhhhhhhhh
Q 021819           73 AVSRAVE-------GCKGVFHVASPC-------------TL-------------------------EDPVDPEKELILPA  107 (307)
Q Consensus        73 ~~~~~~~-------~~d~vi~~a~~~-------------~~-------------------------~~~~~~~~~~~~~n  107 (307)
                      +++++++       ++|++|||||..             ..                         ....+++...+++|
T Consensus       137 ~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn  216 (418)
T 4eue_A          137 TKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVM  216 (418)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHh
Confidence            8887765       579999999874             10                         01223445666777


Q ss_pred             HHHHH-HHHHHHHhcC----CcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh-
Q 021819          108 VQGTL-NVLEAAKRFG----VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-  181 (307)
Q Consensus       108 ~~~~~-~l~~~~~~~~----~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-  181 (307)
                      ..+.. .+++++...+    .+++|++||+++..+.+..                  ....|+.+|...+.+.+.++.+ 
T Consensus       217 ~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~------------------~~~aY~ASKaAL~~ltrsLA~EL  278 (418)
T 4eue_A          217 GGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIY------------------REGTIGIAKKDLEDKAKLINEKL  278 (418)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTT------------------TTSHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCcc------------------ccHHHHHHHHHHHHHHHHHHHHh
Confidence            66555 5556554332    2579999997764433221                  1146888888887777666543 


Q ss_pred             ---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCCCCCceEEecCC--
Q 021819          182 ---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNG--  256 (307)
Q Consensus       182 ---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~~~g~~~~~~~--  256 (307)
                         .|++++++.||.|.++....... ..........        .....-.++|+++++.+++...-..|.++..|+  
T Consensus       279 a~~~GIrVN~V~PG~v~T~~s~~ip~-~p~y~~~~~~--------~mk~~G~~E~v~e~~~~L~sd~~~~g~~~~~D~~~  349 (418)
T 4eue_A          279 NRVIGGRAFVSVNKALVTKASAYIPT-FPLYAAILYK--------VMKEKNIHENCIMQIERMFSEKIYSNEKIQFDDKG  349 (418)
T ss_dssp             HHHHSCEEEEEECCCCCCHHHHTSTT-HHHHHHHHHH--------HHHHTTCCCCHHHHHHHHHHHTTSSSSCCCCCTTS
T ss_pred             CCccCeEEEEEECCcCcChhhhcCCC-CcHHHHHHHH--------HHhhcCChHHHHHHHHHHhhccccCCCccccCCCc
Confidence               68999999999998865433211 1111111111        011234679999999998876544455433322  


Q ss_pred             ccc-----H-HHHHHHHHHhCCCCCCCc-cccCCchHHHHHHHhhhcccccCccccc
Q 021819          257 IYQ-----F-GDFAERVSKLFPEFPVHR-FVFQSPLRFILWLAIILPHEKNGVTYSI  306 (307)
Q Consensus       257 ~~~-----~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (307)
                      .+.     + .++-+.+.+..+.+.-.. ........+-..|..+++.+-.|++|+-
T Consensus       350 ~~r~d~~e~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~~~~~~~~  406 (418)
T 4eue_A          350 RLRMDDLELRKDVQDEVDRIWSNITPENFKELSDYKGYKKEFMNLNGFDLDGVDYSK  406 (418)
T ss_dssp             CEESCTTTTCHHHHHHHHHHHHHCCTTTHHHHSCHHHHHHHHHHHTTCSCTTCCTTS
T ss_pred             eeeCChhhcCHHHHHHHHHHHHHhccccHHHHhhHHHHHHHHHHhcCCCCCCCcCCC
Confidence            111     1 233333333332111110 1122355566688999999999999974

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.77  E-value=1.6e-18  Score=161.68  Aligned_cols=221  Identities=18%  Similarity=0.153  Sum_probs=143.7

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC---------CCCccc-ccCCCCCCCceEEEEcccCChhHHHH
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG---------SDSSHL-FALPGAGDANLRVFEADVLDSGAVSR   76 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~---------~~~~~~-~~~~~~~~~~~~~i~~D~~d~~~~~~   76 (307)
                      +++|+++||||+++||+++++.|+++|+ +|++.+|+.         ...+.+ .++...+. .+   .+|++|.+++++
T Consensus         6 l~gkvalVTGas~GIG~a~A~~la~~Ga-~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~-~~---~~d~~d~~~~~~   80 (604)
T 2et6_A            6 FKDKVVIITGAGGGLGKYYSLEFAKLGA-KVVVNDLGGALNGQGGNSKAADVVVDEIVKNGG-VA---VADYNNVLDGDK   80 (604)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECC-----------CHHHHHHHHHHHTTC-EE---EEECCCTTCHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCccccccccchHHHHHHHHHHHhcCC-eE---EEEcCCHHHHHH
Confidence            5678999999999999999999999999 888887754         111111 11111111 22   246666544433


Q ss_pred             Hh-------cCccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCC
Q 021819           77 AV-------EGCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGW  141 (307)
Q Consensus        77 ~~-------~~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~  141 (307)
                      ++       ..+|++|||||....    ....++++..+++|+.|+.++.+++    ++++.++||++||..+..+.++.
T Consensus        81 ~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~~  160 (604)
T 2et6_A           81 IVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQ  160 (604)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTB
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCc
Confidence            33       368999999997643    2334467899999999999988877    34455799999998877665543


Q ss_pred             CCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCC
Q 021819          142 KGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK  218 (307)
Q Consensus       142 ~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~  218 (307)
                                          ..|+.+|.....+.+.++.+   +||++++|.|+ +.++.....                
T Consensus       161 --------------------~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~----------------  203 (604)
T 2et6_A          161 --------------------ANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESI----------------  203 (604)
T ss_dssp             --------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTT----------------
T ss_pred             --------------------hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCcccccc----------------
Confidence                                45777777777777666654   58999999997 322210000                


Q ss_pred             CCCCCcccCcccHHHHHHHHHHhhcCCC-CCceE-EecC-------------------CcccHHHHHHHHHHhC
Q 021819          219 DTQEYHWLGAVPVKDVAKAQVLLFESPA-ASGRY-LCTN-------------------GIYQFGDFAERVSKLF  271 (307)
Q Consensus       219 ~~~~~~~~~~i~~~dva~~~~~~~~~~~-~~g~~-~~~~-------------------~~~~~~~~~~~~~~~~  271 (307)
                        .+........++|+|.++++++.... ..|.. .+.+                   ..++..++.+.+.+..
T Consensus       204 --~~~~~~~~~~pe~vA~~v~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  275 (604)
T 2et6_A          204 --MPPPMLEKLGPEKVAPLVLYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEIL  275 (604)
T ss_dssp             --SCHHHHTTCSHHHHHHHHHHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHT
T ss_pred             --CChhhhccCCHHHHHHHHHHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhh
Confidence              00011123589999999998886541 23432 2211                   2356677877776654

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.75  E-value=1.4e-17  Score=167.81  Aligned_cols=204  Identities=16%  Similarity=0.115  Sum_probs=140.9

Q ss_pred             ccCCcEEEEeCCchh-hHHHHHHHHHHCCCCeEEEE-eCCCCCCccc-cc----CCCCCCCceEEEEcccCChhHHHHHh
Q 021819            6 EKEEETVCVTGANGF-IGTWLVKTLLDNNYTSINAT-VFPGSDSSHL-FA----LPGAGDANLRVFEADVLDSGAVSRAV   78 (307)
Q Consensus         6 ~~~~~~ilItGatG~-iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~-~~----~~~~~~~~~~~i~~D~~d~~~~~~~~   78 (307)
                      .+++|+++||||+++ ||+++++.|+++|+ +|+++ .|+....... ..    ....+. ++.++.+|++|.+++.+++
T Consensus       672 ~l~gKvaLVTGASsGgIG~aIA~~La~~GA-~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~-~v~~v~~DVsd~~sV~alv  749 (1887)
T 2uv8_A          672 TFKDKYVLITGAGKGSIGAEVLQGLLQGGA-KVVVTTSRFSKQVTDYYQSIYAKYGAKGS-TLIVVPFNQGSKQDVEALI  749 (1887)
T ss_dssp             CCTTCEEEEESCCSSSHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHHHHHHCCTTC-EEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCC-EEEEEecCCHHHHHHHHHHHHHHhhcCCC-eEEEEEecCCCHHHHHHHH
Confidence            456789999999998 99999999999999 88887 4554332211 11    111112 6889999999999988776


Q ss_pred             c-------------CccEEEEeccCCCCC-C----C--CChhhhhhhhhHHHHHHHHHHHHhc------CCcEEEEecCc
Q 021819           79 E-------------GCKGVFHVASPCTLE-D----P--VDPEKELILPAVQGTLNVLEAAKRF------GVRRVVVTSSI  132 (307)
Q Consensus        79 ~-------------~~d~vi~~a~~~~~~-~----~--~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~v~iSS~  132 (307)
                      +             .+|+||||||..... .    .  .+.+...+++|+.++.+++++++..      +.++||++||.
T Consensus       750 ~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~  829 (1887)
T 2uv8_A          750 EFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPN  829 (1887)
T ss_dssp             HHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSC
T ss_pred             HHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcCh
Confidence            3             489999999976432 1    1  2346889999999999999988432      22689999997


Q ss_pred             ceeccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHH-HHHHHHhcC--CcEEEEecCceeC-CCCCCCCcchHH
Q 021819          133 SAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKA-AWEFAEKHG--VDVVAIHPATCLG-PLMQPYLNASCA  208 (307)
Q Consensus       133 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~-~~~~~~~~~--i~~~ivrp~~v~g-~~~~~~~~~~~~  208 (307)
                      .+..+  +.                    ..|+.+|...+.+ .+.++++.+  |++++|+||.|.| +..... .....
T Consensus       830 ag~~g--g~--------------------~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~-~~~~~  886 (1887)
T 2uv8_A          830 HGTFG--GD--------------------GMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN-NIIAE  886 (1887)
T ss_dssp             TTCSS--CB--------------------TTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----C-CTTHH
T ss_pred             HhccC--CC--------------------chHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccc-hhHHH
Confidence            66443  11                    4699999999987 555544332  9999999999984 432211 11111


Q ss_pred             HHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCC
Q 021819          209 VLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (307)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~  245 (307)
                      .    ....       ...+.+++|+|.++++++...
T Consensus       887 ~----~~~~-------plr~~sPEEVA~avlfLaSd~  912 (1887)
T 2uv8_A          887 G----IEKM-------GVRTFSQKEMAFNLLGLLTPE  912 (1887)
T ss_dssp             H----HHTT-------SCCCEEHHHHHHHHHGGGSHH
T ss_pred             H----HHhc-------CCCCCCHHHHHHHHHHHhCCC
Confidence            1    1111       113458999999999888654

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.75  E-value=6e-18  Score=162.26  Aligned_cols=206  Identities=18%  Similarity=0.205  Sum_probs=151.2

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHH-HCCCCeEEEEeCCCCCCccc----ccCCCCCCCceEEEEcccCChhHHHHHhcC--
Q 021819            8 EEETVCVTGANGFIGTWLVKTLL-DNNYTSINATVFPGSDSSHL----FALPGAGDANLRVFEADVLDSGAVSRAVEG--   80 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~-~~g~~~V~~~~r~~~~~~~~----~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~--   80 (307)
                      .+++++||||+|+||+++++.|. ++|+++|+.+.|+....+..    .++...+. ++.++.+|++|.++++++++.  
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~-~v~~~~~Dvsd~~~v~~~~~~~~  607 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGA-EVSLQACDVADRETLAKVLASIP  607 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHTSC
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCC-cEEEEEeecCCHHHHHHHHHHHH
Confidence            46799999999999999999999 78986688899974332221    22211122 788999999999999998863  


Q ss_pred             ----ccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           81 ----CKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        81 ----~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                          +|+||||||....    +...+.+...+++|+.|+.++.+++.. .. +||++||+++..+.++.           
T Consensus       608 ~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~-~l-~iV~~SS~ag~~g~~g~-----------  674 (795)
T 3slk_A          608 DEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP-DV-ALVLFSSVSGVLGSGGQ-----------  674 (795)
T ss_dssp             TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT-TS-EEEEEEETHHHHTCSSC-----------
T ss_pred             HhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh-CC-EEEEEccHHhcCCCCCC-----------
Confidence                6999999998754    223445789999999999999999843 34 89999999888776664           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHH
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK  232 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  232 (307)
                               ..|+.+|.+.+.+.+.+. ..|+++++|.||.+.+++....  ........+..        .....+..+
T Consensus       675 ---------~~YaAaka~~~alA~~~~-~~Gi~v~sI~pG~v~t~g~~~~--~~~~~~~~~~~--------~g~~~l~~~  734 (795)
T 3slk_A          675 ---------GNYAAANSFLDALAQQRQ-SRGLPTRSLAWGPWAEHGMAST--LREAEQDRLAR--------SGLLPISTE  734 (795)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHH-HTTCCEEEEEECCCSCCCHHHH--HHHHHHHHHHH--------TTBCCCCHH
T ss_pred             ---------HHHHHHHHHHHHHHHHHH-HcCCeEEEEECCeECcchhhcc--ccHHHHHHHHh--------cCCCCCCHH
Confidence                     579999988887776654 4599999999998876542110  00111112222        123457889


Q ss_pred             HHHHHHHHhhcCCCC
Q 021819          233 DVAKAQVLLFESPAA  247 (307)
Q Consensus       233 dva~~~~~~~~~~~~  247 (307)
                      +....+..++..+..
T Consensus       735 e~~~~~~~~l~~~~~  749 (795)
T 3slk_A          735 EGLSQFDAACGGAHT  749 (795)
T ss_dssp             HHHHHHHHHHTSSCS
T ss_pred             HHHHHHHHHHhCCCc
Confidence            999999988887654

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.73  E-value=7e-18  Score=165.11  Aligned_cols=205  Identities=16%  Similarity=0.094  Sum_probs=140.5

Q ss_pred             ccCCcEEEEeCCchh-hHHHHHHHHHHCCCCeEEEE-eCCCCCCccc-ccCCCC---CCCceEEEEcccCChhHHHHHhc
Q 021819            6 EKEEETVCVTGANGF-IGTWLVKTLLDNNYTSINAT-VFPGSDSSHL-FALPGA---GDANLRVFEADVLDSGAVSRAVE   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~-iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~-~~~~~~---~~~~~~~i~~D~~d~~~~~~~~~   79 (307)
                      ++++|+++||||+|+ ||+++++.|+++|+ +|+++ .|+....... ..+...   ...++.++.+|++|.+++.++++
T Consensus       473 sL~GKvALVTGASgGGIGrAIAr~LA~~GA-~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe  551 (1688)
T 2pff_A          473 TFKDKYVLITGAGKGSIGAEVLQGLLQGGA-KVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  551 (1688)
T ss_dssp             CCCSCCEEECSCSSSSTHHHHHHHHHHHTC-EEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHH
T ss_pred             ccCCCEEEEECCChHHHHHHHHHHHHHCcC-EEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHH
Confidence            356789999999998 99999999999999 88877 5654443322 222111   12268899999999998887763


Q ss_pred             -------------CccEEEEeccCCCCC-C----C--CChhhhhhhhhHHHHHHHHHHHHh--c----CCcEEEEecCcc
Q 021819           80 -------------GCKGVFHVASPCTLE-D----P--VDPEKELILPAVQGTLNVLEAAKR--F----GVRRVVVTSSIS  133 (307)
Q Consensus        80 -------------~~d~vi~~a~~~~~~-~----~--~~~~~~~~~~n~~~~~~l~~~~~~--~----~~~~~v~iSS~~  133 (307)
                                   .+|+||||||..... .    .  .+.+...+++|+.++.+++++++.  .    +.++||++||..
T Consensus       552 ~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiA  631 (1688)
T 2pff_A          552 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH  631 (1688)
T ss_dssp             HHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCT
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChH
Confidence                         489999999976432 1    1  234688999999999999998832  2    226899999976


Q ss_pred             eeccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHH-HHHHHhc--CCcEEEEecCceeC-CCCCCCCcchHHH
Q 021819          134 AIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAA-WEFAEKH--GVDVVAIHPATCLG-PLMQPYLNASCAV  209 (307)
Q Consensus       134 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~-~~~~~~~--~i~~~ivrp~~v~g-~~~~~~~~~~~~~  209 (307)
                      +..+  +.                    ..|+.+|...+.+. +.++++.  .+++++|.||.|.| +..... ...   
T Consensus       632 G~~G--g~--------------------saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~-e~~---  685 (1688)
T 2pff_A          632 GTFG--GD--------------------GMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN-NII---  685 (1688)
T ss_dssp             TTSS--CB--------------------TTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTT-TTC---
T ss_pred             hccC--Cc--------------------hHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCc-hHH---
Confidence            5433  11                    46999999999883 3333322  28999999999984 432210 000   


Q ss_pred             HHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCC
Q 021819          210 LQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (307)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~  245 (307)
                       ..       ........+.+++|+|+++++++...
T Consensus       686 -~~-------~l~~iplR~~sPEEVA~aIlFLaSd~  713 (1688)
T 2pff_A          686 -AE-------GIEKMGVRTFSQKEMAFNLLGLLTPE  713 (1688)
T ss_dssp             -ST-------TTSSSSCCCCCCCTTHHHHHHHTSTT
T ss_pred             -HH-------HHHhCCCCCCCHHHHHHHHHHHhCCC
Confidence             00       00011123458999999999988654

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.73  E-value=1e-16  Score=161.37  Aligned_cols=204  Identities=14%  Similarity=0.075  Sum_probs=141.9

Q ss_pred             ccCCcEEEEeCCchh-hHHHHHHHHHHCCCCeEEEEe-CCCCCCcc----c-ccCCCCCCCceEEEEcccCChhHHHHHh
Q 021819            6 EKEEETVCVTGANGF-IGTWLVKTLLDNNYTSINATV-FPGSDSSH----L-FALPGAGDANLRVFEADVLDSGAVSRAV   78 (307)
Q Consensus         6 ~~~~~~ilItGatG~-iG~~l~~~L~~~g~~~V~~~~-r~~~~~~~----~-~~~~~~~~~~~~~i~~D~~d~~~~~~~~   78 (307)
                      .+++|++|||||+|+ ||+++++.|+++|+ +|++++ |+......    + ..+...+. ++.++.+|++|.+++.+++
T Consensus       649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~GA-~VVl~~~R~~~~l~~~a~eL~~el~~~G~-~v~~v~~DVsd~esV~alv  726 (1878)
T 2uv9_A          649 TFQGKHALMTGAGAGSIGAEVLQGLLSGGA-KVIVTTSRFSRQVTEYYQGIYARCGARGS-QLVVVPFNQGSKQDVEALV  726 (1878)
T ss_dssp             CCTTCEEEEESCCTTSHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHHHHHHCCTTC-EEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCC-EEEEEecCChHHHHHHHHHHHHHhhccCC-eEEEEEcCCCCHHHHHHHH
Confidence            356789999999999 99999999999999 888875 44332211    1 11111122 6889999999999988876


Q ss_pred             c-----------CccEEEEeccCCCCC-C---C---CChhhhhhhhhHHHHHHHHHHHHh------cCCcEEEEecCcce
Q 021819           79 E-----------GCKGVFHVASPCTLE-D---P---VDPEKELILPAVQGTLNVLEAAKR------FGVRRVVVTSSISA  134 (307)
Q Consensus        79 ~-----------~~d~vi~~a~~~~~~-~---~---~~~~~~~~~~n~~~~~~l~~~~~~------~~~~~~v~iSS~~~  134 (307)
                      +           .+|+||||||..... .   .   .+.+...+++|+.++.+++++++.      .+.++||++||..+
T Consensus       727 ~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag  806 (1878)
T 2uv9_A          727 NYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHG  806 (1878)
T ss_dssp             HHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSS
T ss_pred             HHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhh
Confidence            3           489999999976432 1   1   234688999999999999887432      12368999999776


Q ss_pred             eccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh-c--CCcEEEEecCcee-CCCCCCCCcchHHHH
Q 021819          135 IVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-H--GVDVVAIHPATCL-GPLMQPYLNASCAVL  210 (307)
Q Consensus       135 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-~--~i~~~ivrp~~v~-g~~~~~~~~~~~~~~  210 (307)
                      ..+.  .                    ..|+.+|...+.+...+..+ .  ++++++|.||.+. ++....     ....
T Consensus       807 ~~gg--~--------------------~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~-----~~~~  859 (1878)
T 2uv9_A          807 TFGN--D--------------------GLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSA-----NNLV  859 (1878)
T ss_dssp             SSSC--C--------------------SSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSH-----HHHT
T ss_pred             ccCC--c--------------------hHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCccccc-----chhh
Confidence            4431  1                    46999999999887665443 1  3999999999997 554221     1111


Q ss_pred             HHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCC
Q 021819          211 QQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (307)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~  245 (307)
                      .......+       ..+.+++|+|.++++++...
T Consensus       860 ~~~~~~~p-------lr~~sPeEVA~avlfLaSd~  887 (1878)
T 2uv9_A          860 AEGVEKLG-------VRTFSQQEMAFNLLGLMAPA  887 (1878)
T ss_dssp             HHHHHTTT-------CCCBCHHHHHHHHHHHHSHH
T ss_pred             HHHHHhcC-------CCCCCHHHHHHHHHHHhCCc
Confidence            12222211       13458999999998887543

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.57  E-value=6.6e-14  Score=147.83  Aligned_cols=202  Identities=15%  Similarity=0.110  Sum_probs=131.2

Q ss_pred             cCCcEEEEeCCchh-hHHHHHHHHHHCCCCeEEEEeCCCCC-----Ccccc-cCCCCCCCceEEEEcccCChhHHHHHhc
Q 021819            7 KEEETVCVTGANGF-IGTWLVKTLLDNNYTSINATVFPGSD-----SSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE   79 (307)
Q Consensus         7 ~~~~~ilItGatG~-iG~~l~~~L~~~g~~~V~~~~r~~~~-----~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~   79 (307)
                      +++|+++||||+++ ||+++++.|+++|+ +|++.+|+...     .+.+. .+...+. ++..+++|++|+++++++++
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA-~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~-~~~~v~~Dvtd~~~v~~lv~ 2211 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGA-TVIATTSRLDDDRLAFYKQLYRDHARFDA-TLWVVPANMASYSDIDKLVE 2211 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTC-EEEEEESCCSHHHHHHHHHHHHHHCCTTC-EEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCC-EEEEEeCChhhhhhHHHHHHHHHHhhcCC-eEEEEEecCCCHHHHHHHHH
Confidence            57899999999999 99999999999999 89998887654     22222 2222222 67889999999999887753


Q ss_pred             -----------CccEEEEeccCC----CC-----CCCCChh----hhhhhhhHHHHHHHHHHHHh----cCCc---EE-E
Q 021819           80 -----------GCKGVFHVASPC----TL-----EDPVDPE----KELILPAVQGTLNVLEAAKR----FGVR---RV-V  127 (307)
Q Consensus        80 -----------~~d~vi~~a~~~----~~-----~~~~~~~----~~~~~~n~~~~~~l~~~~~~----~~~~---~~-v  127 (307)
                                 ++|++|||||..    ..     ....+++    +..+++|+.++..+++++..    .+..   .+ +
T Consensus      2212 ~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~ 2291 (3089)
T 3zen_D         2212 WVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVL 2291 (3089)
T ss_dssp             HHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred             HHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEE
Confidence                       379999999971    11     1122223    34488999999888887743    2221   22 2


Q ss_pred             EecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh----cCCcEEEEecCceeCCCCCCCC
Q 021819          128 VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK----HGVDVVAIHPATCLGPLMQPYL  203 (307)
Q Consensus       128 ~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~~i~~~ivrp~~v~g~~~~~~~  203 (307)
                      ..|+..+.  ..+                    ...|+.||...+.+.+.++.+    .+++++.+.||.|-+.......
T Consensus      2292 ~~ss~~g~--~g~--------------------~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~ 2349 (3089)
T 3zen_D         2292 PGSPNRGM--FGG--------------------DGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQN 2349 (3089)
T ss_dssp             EECSSTTS--CSS--------------------CSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTT
T ss_pred             ECCccccc--CCC--------------------chHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccc
Confidence            22321111  111                    136888888888888888777    2689999999999743322111


Q ss_pred             cchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhc
Q 021819          204 NASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE  243 (307)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~  243 (307)
                      .......    ...       ......++|+|.++++++.
T Consensus      2350 ~~~~~~~----~~~-------~~r~~~PeEIA~avlfLaS 2378 (3089)
T 3zen_D         2350 DAIVSAV----EEA-------GVTTYTTDEMAAMLLDLCT 2378 (3089)
T ss_dssp             TTTHHHH----GGG-------SCBCEEHHHHHHHHHHTTS
T ss_pred             hhHHHHH----Hhc-------CCCCCCHHHHHHHHHHHhC
Confidence            1111111    111       1123489999999988775

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.54  E-value=4.4e-14  Score=149.17  Aligned_cols=165  Identities=17%  Similarity=0.143  Sum_probs=121.0

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcc----cccCCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH----LFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      .+|+++||||+|+||+++++.|+++|++.|+.+.|+....+.    ...+...+. ++..+.+|++|.++++++++    
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~-~v~~~~~Dvsd~~~v~~~~~~~~~ 1961 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGV-QVLVSTSNASSLDGARSLITEATQ 1961 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTC-EEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCC-EEEEEecCCCCHHHHHHHHHHHHh
Confidence            468999999999999999999999999558888887655421    111111122 67888999999998887765    


Q ss_pred             --CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                        .+|+||||||....    +...+.+...+++|+.|+.++.+++...  ..++||++||+++..+.++.          
T Consensus      1962 ~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g~---------- 2031 (2512)
T 2vz8_A         1962 LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAGQ---------- 2031 (2512)
T ss_dssp             HSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTTC----------
T ss_pred             cCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCCc----------
Confidence              57999999997543    2345567899999999999998888654  34799999998877665553          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCce
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATC  194 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v  194 (307)
                                ..|+.+|...+.+.+.... .|++...+..+.+
T Consensus      2032 ----------~~Y~aaKaal~~l~~~rr~-~Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2032 ----------ANYGFANSAMERICEKRRH-DGLPGLAVQWGAI 2063 (2512)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHH-TTSCCCEEEECCB
T ss_pred             ----------HHHHHHHHHHHHHHHHHHH-CCCcEEEEEccCc
Confidence                      5799999999988875544 4899888887755

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.38  E-value=1.3e-12  Score=95.67  Aligned_cols=94  Identities=23%  Similarity=0.290  Sum_probs=77.0

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCC-CCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNN-YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      +++|+|+|+ |++|+++++.|.+.| + +|++++|++...+.+...      ++..+.+|+++.+++.++++++|+|||+
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~-~v~~~~r~~~~~~~~~~~------~~~~~~~d~~~~~~~~~~~~~~d~vi~~   76 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNY-SVTVADHDLAALAVLNRM------GVATKQVDAKDEAGLAKALGGFDAVISA   76 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSE-EEEEEESCHHHHHHHHTT------TCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCc-eEEEEeCCHHHHHHHHhC------CCcEEEecCCCHHHHHHHHcCCCEEEEC
Confidence            579999999 999999999999999 6 899999976655444322      6788999999999999999999999999


Q ss_pred             ccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEE
Q 021819           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV  128 (307)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  128 (307)
                      ++..                  ....++++|.+.|++++..
T Consensus        77 ~~~~------------------~~~~~~~~~~~~g~~~~~~   99 (118)
T 3ic5_A           77 APFF------------------LTPIIAKAAKAAGAHYFDL   99 (118)
T ss_dssp             SCGG------------------GHHHHHHHHHHTTCEEECC
T ss_pred             CCch------------------hhHHHHHHHHHhCCCEEEe
Confidence            8531                  1467888999998765543

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.26  E-value=4.7e-12  Score=109.46  Aligned_cols=173  Identities=14%  Similarity=0.087  Sum_probs=112.1

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCC------CeEEEEeCC----CCCCcc-cccCCCCCCCceEEEEcccCChhHHHHH
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNY------TSINATVFP----GSDSSH-LFALPGAGDANLRVFEADVLDSGAVSRA   77 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~------~~V~~~~r~----~~~~~~-~~~~~~~~~~~~~~i~~D~~d~~~~~~~   77 (307)
                      .+||+||||+||+|++++..|+.+|.      .+|.+++++    ..+.+. ...+...   ...+ ..|+....+..++
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~---~~~~-~~~i~~~~~~~~a   80 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDC---AFPL-LAGMTAHADPMTA   80 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTT---TCTT-EEEEEEESSHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhh---cccc-cCcEEEecCcHHH
Confidence            46999999999999999999999885      278888776    221111 0001100   0011 1355555567788


Q ss_pred             hcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcC-Cc-EEEEecCcceeccCCCCCCcccccCCCCchh
Q 021819           78 VEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VR-RVVVTSSISAIVPNPGWKGKVFDETSWTDLE  155 (307)
Q Consensus        78 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~  155 (307)
                      ++++|+|||+||.....  .....+.+..|+.+++++++++.+++ .. +||++|.=.....      ....+..   +.
T Consensus        81 l~~aD~Vi~~ag~~~~~--g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t------~~~~~~~---~~  149 (329)
T 1b8p_A           81 FKDADVALLVGARPRGP--GMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNA------YIAMKSA---PS  149 (329)
T ss_dssp             TTTCSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH------HHHHHTC---TT
T ss_pred             hCCCCEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHH------HHHHHHc---CC
Confidence            99999999999975432  23456788999999999999999984 54 8888885111000      0000000   00


Q ss_pred             hhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCC
Q 021819          156 YCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPL  198 (307)
Q Consensus       156 ~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~  198 (307)
                      ++..  ..++.++....++...+++..|++...++...|+|..
T Consensus       150 ~p~~--~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~H  190 (329)
T 1b8p_A          150 LPAK--NFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNH  190 (329)
T ss_dssp             SCGG--GEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCS
T ss_pred             CCHH--HEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEecc
Confidence            1111  3577787777777777777889888888877778843

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=99.13  E-value=1.9e-10  Score=99.13  Aligned_cols=118  Identities=14%  Similarity=0.040  Sum_probs=82.8

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCC--CCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g--~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      +++||+||||+|++|+.++..|+++|  . +|+++++++. ......+..... ... +.+ +.+..++.++++++|+||
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~-ev~l~Di~~~-~~~~~dL~~~~~-~~~-v~~-~~~t~d~~~al~gaDvVi   81 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVS-VLHLYDVVNA-PGVTADISHMDT-GAV-VRG-FLGQQQLEAALTGMDLII   81 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEE-EEEEEESSSH-HHHHHHHHTSCS-SCE-EEE-EESHHHHHHHHTTCSEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCC-EEEEEeCCCc-HhHHHHhhcccc-cce-EEE-EeCCCCHHHHcCCCCEEE
Confidence            35699999999999999999999988  5 8998887654 111111110000 111 111 234556778899999999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCc
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~  132 (307)
                      |+||......  ......+..|+.+++++++++.+.+.+.+|+++|.
T Consensus        82 ~~ag~~~~~g--~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SN  126 (326)
T 1smk_A           82 VPAGVPRKPG--MTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISN  126 (326)
T ss_dssp             ECCCCCCCSS--CCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             EcCCcCCCCC--CCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence            9999654322  23356789999999999999999887777777773

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=99.08  E-value=3.3e-10  Score=85.59  Aligned_cols=101  Identities=13%  Similarity=0.102  Sum_probs=72.7

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHH-hcCccEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVF   85 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~d~vi   85 (307)
                      .+|++|+|+|+ |.+|+.+++.|.+.|+ +|+++++++...+.+...      +...+.+|.++.+.+.++ +.++|+||
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~------~~~~~~~d~~~~~~l~~~~~~~~d~vi   75 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASY------ATHAVIANATEENELLSLGIRNFEYVI   75 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTC-CCEEEESCHHHHHTTTTT------CSEEEECCTTCHHHHHTTTGGGCSEEE
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHh------CCEEEEeCCCCHHHHHhcCCCCCCEEE
Confidence            45678999998 9999999999999998 899988865443332221      456788999998888775 67899999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      ++++..            .+.|    ..+.+.+++.+.+++|..++
T Consensus        76 ~~~~~~------------~~~~----~~~~~~~~~~~~~~ii~~~~  105 (144)
T 2hmt_A           76 VAIGAN------------IQAS----TLTTLLLKELDIPNIWVKAQ  105 (144)
T ss_dssp             ECCCSC------------HHHH----HHHHHHHHHTTCSEEEEECC
T ss_pred             ECCCCc------------hHHH----HHHHHHHHHcCCCeEEEEeC
Confidence            997641            0122    23566677777777777665

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.07  E-value=3.6e-09  Score=91.54  Aligned_cols=266  Identities=12%  Similarity=0.042  Sum_probs=147.4

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHH-HCCCCeEEEEeCCCCCCcc------------cccCCCCCCCceEEEEcccCChhH
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLL-DNNYTSINATVFPGSDSSH------------LFALPGAGDANLRVFEADVLDSGA   73 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~-~~g~~~V~~~~r~~~~~~~------------~~~~~~~~~~~~~~i~~D~~d~~~   73 (307)
                      +..|++|||||+.+||.+.+..|. ..|. .++++.+..+..+.            ..+...........+.+|++|+++
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA-~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~  126 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGA-ATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEI  126 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCC-CEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHH
Confidence            346899999999999999999988 5688 78888775433221            001101111168899999999998


Q ss_pred             HHHHhc-------CccEEEEeccCCCCCCCC---------Chh------------h---------hhhhhhHHHHHH---
Q 021819           74 VSRAVE-------GCKGVFHVASPCTLEDPV---------DPE------------K---------ELILPAVQGTLN---  113 (307)
Q Consensus        74 ~~~~~~-------~~d~vi~~a~~~~~~~~~---------~~~------------~---------~~~~~n~~~~~~---  113 (307)
                      ++++++       ++|++||++|........         ++.            .         ..-+-++.++..   
T Consensus       127 i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg  206 (401)
T 4ggo_A          127 KAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMG  206 (401)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHh
Confidence            888775       679999999965321100         000            0         000111222221   


Q ss_pred             ------HHHHHHhcC----CcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc-
Q 021819          114 ------VLEAAKRFG----VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH-  182 (307)
Q Consensus       114 ------l~~~~~~~~----~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~-  182 (307)
                            .+++....+    ..++|-+|+++..-.               .|.|   ..+.+|.+|...|...+.++.+. 
T Consensus       207 ~s~~s~w~~al~~a~lla~G~siva~SYiGse~t---------------~P~Y---~~G~mG~AKaaLEa~~r~La~eL~  268 (401)
T 4ggo_A          207 GEDWERWIKQLSKEGLLEEGCITLAYSYIGPEAT---------------QALY---RKGTIGKAKEHLEATAHRLNKENP  268 (401)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGG---------------HHHH---TTSHHHHHHHHHHHHHHHHHHHCT
T ss_pred             hhHHHHHHHHHHhhhcccCCceEEEEeccCccee---------------ecCC---CccHHHHHHHHHHHHHHHHHHhcC
Confidence                  223333333    256888887543111               1223   12468999999999999998775 


Q ss_pred             CCcEEEEecCceeCCCCCCCCcchHHHH---HHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCC------C----CCc
Q 021819          183 GVDVVAIHPATCLGPLMQPYLNASCAVL---QQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP------A----ASG  249 (307)
Q Consensus       183 ~i~~~ivrp~~v~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~------~----~~g  249 (307)
                      ++++.++.++.+-+........ ++.++   .+..+.           .-..+.|++.+..+....      .    ..|
T Consensus       269 ~~~a~v~v~~a~vT~AssaIP~-~ply~~~l~kvmk~-----------~g~heg~ieq~~rl~~~~ly~~~~~~~~D~~~  336 (401)
T 4ggo_A          269 SIRAFVSVNKGLVTRASAVIPV-IPLYLASLFKVMKE-----------KGNHEGCIEQITRLYAERLYRKDGTIPVDEEN  336 (401)
T ss_dssp             TEEEEEEECCCCCCTTGGGSSS-HHHHHHHHHHHHHH-----------HTCCCCHHHHHHHHHHHTTSCTTCCCCCCTTS
T ss_pred             CCcEEEEEcCccccchhhcCCC-chHHHHHHHHHHHh-----------cCCCCchHHHHHHHHHHhhccCCCCCCcCCCC
Confidence            6788888888877766554422 22222   222211           112345555555544321      1    112


Q ss_pred             eEEecCCcccHHHHHHHHHHhCC---CCCCCccccCCchHHHHHHHhhhcccccCccccc
Q 021819          250 RYLCTNGIYQFGDFAERVSKLFP---EFPVHRFVFQSPLRFILWLAIILPHEKNGVTYSI  306 (307)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (307)
                      +.-..+-.+. .|+-..+.+.++   .-++..  ......+-..|..+++.+-+|++|+-
T Consensus       337 r~r~d~~el~-~~vq~~v~~~~~~~~~~n~~~--~~d~~~~~~~f~~l~gf~~~~vdy~~  393 (401)
T 4ggo_A          337 RIRIDDWELE-EDVQKAVSALMEKVTGENAES--LTDLAGYRHDFLASNGFDVEGINYEA  393 (401)
T ss_dssp             CEESCTTTTC-HHHHHHHHHHHHHCCTTTHHH--HSCHHHHHHHHHHTTTCSCTTCCSSS
T ss_pred             CccCchhhcC-HHHHHHHHHHHHHhccchHHH--hhhHHHHHHHHHHhcCCCCCCCCCCC
Confidence            3333332221 122233333331   112211  12344555678899999999999964

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.99  E-value=1.1e-10  Score=99.10  Aligned_cols=83  Identities=14%  Similarity=0.081  Sum_probs=64.9

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      .++|+++||||+|++|+++++.|++.|+ +|++++|+.++.+.+........ ++.++.+|++|++++.++++++|+|||
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~-~V~i~~R~~~~~~~l~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~DvlVn  194 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRF-KVNVTAAETADDASRAEAVKGAHFVFT  194 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHH-TCCCEEEECCSHHHHHHHTTTCSEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCHHHHHHHHHHHHhcC-CcEEEEecCCCHHHHHHHHHhCCEEEE
Confidence            4578999999999999999999999999 79999997554433321100000 356778999999999999999999999


Q ss_pred             eccCC
Q 021819           87 VASPC   91 (307)
Q Consensus        87 ~a~~~   91 (307)
                      +++..
T Consensus       195 ~ag~g  199 (287)
T 1lu9_A          195 AGAIG  199 (287)
T ss_dssp             CCCTT
T ss_pred             CCCcc
Confidence            99853

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.99  E-value=1.7e-09  Score=81.60  Aligned_cols=75  Identities=20%  Similarity=0.124  Sum_probs=60.9

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHH-hcCccEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVF   85 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~d~vi   85 (307)
                      .+|++|+|+|+ |.+|+++++.|.++|+ +|++++++++..+.+...      ++.++.+|.++++.+.++ ++++|+||
T Consensus         4 ~~~~~v~I~G~-G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~------~~~~~~gd~~~~~~l~~~~~~~~d~vi   75 (141)
T 3llv_A            4 NGRYEYIVIGS-EAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDE------GFDAVIADPTDESFYRSLDLEGVSAVL   75 (141)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHT------TCEEEECCTTCHHHHHHSCCTTCSEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHC------CCcEEECCCCCHHHHHhCCcccCCEEE
Confidence            34678999997 9999999999999999 999999977655544432      678899999999988876 46899999


Q ss_pred             Eecc
Q 021819           86 HVAS   89 (307)
Q Consensus        86 ~~a~   89 (307)
                      .+.+
T Consensus        76 ~~~~   79 (141)
T 3llv_A           76 ITGS   79 (141)
T ss_dssp             ECCS
T ss_pred             EecC
Confidence            8754

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.96  E-value=1.1e-09  Score=94.02  Aligned_cols=168  Identities=10%  Similarity=0.079  Sum_probs=101.2

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeC--CCCCCcc----cccCCCCCCCceEEEEcccCCh-hHHHHHhcCc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVF--PGSDSSH----LFALPGAGDANLRVFEADVLDS-GAVSRAVEGC   81 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r--~~~~~~~----~~~~~~~~~~~~~~i~~D~~d~-~~~~~~~~~~   81 (307)
                      |||+||||+|++|++++..|+.+|. .++..+++  +....+.    +..........     .++++. +++.+.++++
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~-----~~i~~~~d~l~~al~ga   75 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSD-----ANIYVESDENLRIIDES   75 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCC-----CEEEEEETTCGGGGTTC
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCC-----eEEEeCCcchHHHhCCC
Confidence            3899999999999999999998875 35777776  3221111    11100000001     223221 2355678999


Q ss_pred             cEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccC
Q 021819           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRK  161 (307)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  161 (307)
                      |+|||+||......  ......+..|+.+++++++++++++ +.+|+++|... ..        .++--.....  ..+.
T Consensus        76 D~Vi~~Ag~~~~~g--~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv-~~--------~t~~~~k~~~--~p~~  141 (313)
T 1hye_A           76 DVVIITSGVPRKEG--MSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPV-DV--------MTYKALVDSK--FERN  141 (313)
T ss_dssp             SEEEECCSCCCCTT--CCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSH-HH--------HHHHHHHHHC--CCTT
T ss_pred             CEEEECCCCCCCCC--CcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcH-HH--------HHHHHHHhhC--cChh
Confidence            99999999754322  3346789999999999999999998 88888887432 10        0000000000  0112


Q ss_pred             ccHHH-HHHHHHHHHHHHHHhcCCcEEEEecCceeCC
Q 021819          162 KWYPV-SKTLAEKAAWEFAEKHGVDVVAIHPATCLGP  197 (307)
Q Consensus       162 ~~y~~-sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~  197 (307)
                      ..+|. +.....++...+++..+++..-++. .|+|.
T Consensus       142 rviG~gt~LD~~r~~~~la~~lgv~~~~v~~-~v~G~  177 (313)
T 1hye_A          142 QVFGLGTHLDSLRFKVAIAKFFGVHIDEVRT-RIIGE  177 (313)
T ss_dssp             SEEECTTHHHHHHHHHHHHHHHTCCGGGEEC-CEEEC
T ss_pred             cEEEeCccHHHHHHHHHHHHHhCcCHHHeEE-EEeec
Confidence            45666 6655555555566666776555554 45553

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.92  E-value=1.2e-09  Score=93.16  Aligned_cols=113  Identities=14%  Similarity=0.041  Sum_probs=77.0

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeC--CCCCCcc----cccCCCCCCCceEEEEcccCChhHHHHHhcCcc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVF--PGSDSSH----LFALPGAGDANLRVFEADVLDSGAVSRAVEGCK   82 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r--~~~~~~~----~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d   82 (307)
                      +||+||||+|++|++++..|+.+|. .++..+++  +..+.+.    +........ .+++.. +  +    .+.++++|
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~-~~~v~~-~--~----~~a~~~aD   72 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDS-NTRVRQ-G--G----YEDTAGSD   72 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTC-CCEEEE-C--C----GGGGTTCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCC-CcEEEe-C--C----HHHhCCCC
Confidence            4899999999999999999998875 35777776  3322111    000000000 222222 1  2    34578999


Q ss_pred             EEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCc
Q 021819           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (307)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~  132 (307)
                      +|||+|+......  ......+..|+.+++++++++++++.+.+|+++|.
T Consensus        73 vVi~~ag~~~~~g--~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SN  120 (303)
T 1o6z_A           73 VVVITAGIPRQPG--QTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSN  120 (303)
T ss_dssp             EEEECCCCCCCTT--CCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCS
T ss_pred             EEEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence            9999999754322  23457789999999999999999987778888874

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.88  E-value=2.9e-09  Score=95.79  Aligned_cols=107  Identities=19%  Similarity=0.162  Sum_probs=77.2

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      +++|+|+| +|++|+++++.|++.|+ +|++.+|+.++.+.+....   . ++..+.+|++|.+++.++++++|+|||++
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G~-~V~v~~R~~~~a~~la~~~---~-~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a   76 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGV---Q-HSTPISLDVNDDAALDAEVAKHDLVISLI   76 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTC-EEEEEESSHHHHHHTTTTC---T-TEEEEECCTTCHHHHHHHHTTSSEEEECC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCcC-EEEEEECCHHHHHHHHHhc---C-CceEEEeecCCHHHHHHHHcCCcEEEECC
Confidence            57899998 89999999999999998 8999999765444333211   1 47788899999999999999999999999


Q ss_pred             cCCCCCCCCChhhhhhh--hh-------HHHHHHHHHHHHhcCCc
Q 021819           89 SPCTLEDPVDPEKELIL--PA-------VQGTLNVLEAAKRFGVR  124 (307)
Q Consensus        89 ~~~~~~~~~~~~~~~~~--~n-------~~~~~~l~~~~~~~~~~  124 (307)
                      +.....   ......++  .|       ...+.+++++|++.|+.
T Consensus        77 ~~~~~~---~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~  118 (450)
T 1ff9_A           77 PYTFHA---TVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGIT  118 (450)
T ss_dssp             C--CHH---HHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCE
T ss_pred             ccccch---HHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCe
Confidence            863210   00111111  12       24678999999999864

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.77  E-value=1.6e-08  Score=88.79  Aligned_cols=93  Identities=16%  Similarity=0.147  Sum_probs=71.9

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      .|||+|.|| |++|+.+++.|.+ .+ +|.+.+++....+.++.       .+..+..|+.|.+++.++++++|+||+++
T Consensus        16 ~mkilvlGa-G~vG~~~~~~L~~-~~-~v~~~~~~~~~~~~~~~-------~~~~~~~d~~d~~~l~~~~~~~DvVi~~~   85 (365)
T 3abi_A           16 HMKVLILGA-GNIGRAIAWDLKD-EF-DVYIGDVNNENLEKVKE-------FATPLKVDASNFDKLVEVMKEFELVIGAL   85 (365)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHTT-------TSEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             ccEEEEECC-CHHHHHHHHHHhc-CC-CeEEEEcCHHHHHHHhc-------cCCcEEEecCCHHHHHHHHhCCCEEEEec
Confidence            458999998 9999999999855 46 78888887655544433       56778899999999999999999999997


Q ss_pred             cCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEec
Q 021819           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (307)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iS  130 (307)
                      +...                  ...++++|.++|+ ++|=+|
T Consensus        86 p~~~------------------~~~v~~~~~~~g~-~yvD~s  108 (365)
T 3abi_A           86 PGFL------------------GFKSIKAAIKSKV-DMVDVS  108 (365)
T ss_dssp             CGGG------------------HHHHHHHHHHHTC-EEEECC
T ss_pred             CCcc------------------cchHHHHHHhcCc-ceEeee
Confidence            6520                  2357888888874 566554

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.74  E-value=1.3e-08  Score=90.43  Aligned_cols=102  Identities=20%  Similarity=0.208  Sum_probs=74.3

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCC--CeEEEEeCCCCCCcccccC-CCCCCCceEEEEcccCChhHHHHHhcC--ccE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNY--TSINATVFPGSDSSHLFAL-PGAGDANLRVFEADVLDSGAVSRAVEG--CKG   83 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~--~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~i~~D~~d~~~~~~~~~~--~d~   83 (307)
                      |++|+|+|| |+||+.+++.|++.|.  .+|++.+|+.++.+.+... ......++..+.+|++|.+++.+++++  +|+
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv   79 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI   79 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence            468999998 9999999999999984  3899999977665443321 110111578899999999999999987  899


Q ss_pred             EEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEec
Q 021819           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (307)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iS  130 (307)
                      |||+++...                  ...++++|.+.|+. ++-++
T Consensus        80 Vin~ag~~~------------------~~~v~~a~l~~g~~-vvD~a  107 (405)
T 4ina_A           80 VLNIALPYQ------------------DLTIMEACLRTGVP-YLDTA  107 (405)
T ss_dssp             EEECSCGGG------------------HHHHHHHHHHHTCC-EEESS
T ss_pred             EEECCCccc------------------ChHHHHHHHHhCCC-EEEec
Confidence            999987421                  13577788888754 44443

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.73  E-value=6.2e-08  Score=72.55  Aligned_cols=98  Identities=17%  Similarity=0.156  Sum_probs=69.2

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHH-hcCccEEEEe
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHV   87 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~d~vi~~   87 (307)
                      +|+|+|+|+ |.+|+.+++.|.+.|+ +|++++|++...+.+....     ++..+.+|.++.+.+.+. ++++|+||++
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~-----~~~~~~~d~~~~~~l~~~~~~~~d~vi~~   76 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDAGIEDADMYIAV   76 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhc-----CcEEEEcCCCCHHHHHHcCcccCCEEEEe
Confidence            358999986 9999999999999998 8999998765443332210     456788999988877655 6789999999


Q ss_pred             ccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEec
Q 021819           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (307)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iS  130 (307)
                      .+.        +     ..|    ..+.+.+++.+.+++|..+
T Consensus        77 ~~~--------~-----~~~----~~~~~~~~~~~~~~ii~~~  102 (140)
T 1lss_A           77 TGK--------E-----EVN----LMSSLLAKSYGINKTIARI  102 (140)
T ss_dssp             CSC--------H-----HHH----HHHHHHHHHTTCCCEEEEC
T ss_pred             eCC--------c-----hHH----HHHHHHHHHcCCCEEEEEe
Confidence            542        1     112    2455566666666676544

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.70  E-value=2.9e-07  Score=70.37  Aligned_cols=100  Identities=13%  Similarity=0.133  Sum_probs=72.0

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCCCCCceEEEEcccCChhHHHHH-hcCccEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGV   84 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~d~v   84 (307)
                      ...++|+|+|+ |.+|+.+++.|.+.|+ +|++++|++...+.+. ..      ++..+.+|.++.+.+.+. ++++|+|
T Consensus        17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~------g~~~~~~d~~~~~~l~~~~~~~ad~V   88 (155)
T 2g1u_A           17 QKSKYIVIFGC-GRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEF------SGFTVVGDAAEFETLKECGMEKADMV   88 (155)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTC------CSEEEESCTTSHHHHHTTTGGGCSEE
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcC------CCcEEEecCCCHHHHHHcCcccCCEE
Confidence            34679999995 9999999999999999 9999999876654443 21      556788999888777765 6789999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHh-cCCcEEEEecC
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKR-FGVRRVVVTSS  131 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~iSS  131 (307)
                      |.+.+..             .    ....+.+.++. .+..+++...+
T Consensus        89 i~~~~~~-------------~----~~~~~~~~~~~~~~~~~iv~~~~  119 (155)
T 2g1u_A           89 FAFTNDD-------------S----TNFFISMNARYMFNVENVIARVY  119 (155)
T ss_dssp             EECSSCH-------------H----HHHHHHHHHHHTSCCSEEEEECS
T ss_pred             EEEeCCc-------------H----HHHHHHHHHHHHCCCCeEEEEEC
Confidence            9986531             0    12344555665 56566666554

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.69  E-value=6.6e-08  Score=78.20  Aligned_cols=76  Identities=16%  Similarity=0.276  Sum_probs=54.5

Q ss_pred             CCcEEEEeCC----------------chhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCCh
Q 021819            8 EEETVCVTGA----------------NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS   71 (307)
Q Consensus         8 ~~~~ilItGa----------------tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~   71 (307)
                      ++|+|+||||                ||++|.++++.|+++|+ +|+.+.|........       ..++..+  |+.+.
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga-~V~lv~~~~~~~~~~-------~~~~~~~--~v~s~   71 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGY-EVCLITTKRALKPEP-------HPNLSIR--EITNT   71 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTC-EEEEEECTTSCCCCC-------CTTEEEE--ECCSH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCC-EEEEEeCCccccccC-------CCCeEEE--EHhHH
Confidence            3689999999                99999999999999999 899998864322110       0145554  44454


Q ss_pred             hH----HHHHhcCccEEEEeccCCCC
Q 021819           72 GA----VSRAVEGCKGVFHVASPCTL   93 (307)
Q Consensus        72 ~~----~~~~~~~~d~vi~~a~~~~~   93 (307)
                      ++    +.+.+.++|++||+||....
T Consensus        72 ~em~~~v~~~~~~~Dili~aAAvsD~   97 (232)
T 2gk4_A           72 KDLLIEMQERVQDYQVLIHSMAVSDY   97 (232)
T ss_dssp             HHHHHHHHHHGGGCSEEEECSBCCSE
T ss_pred             HHHHHHHHHhcCCCCEEEEcCccccc
Confidence            33    33445579999999998654

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.61  E-value=1.7e-07  Score=75.57  Aligned_cols=74  Identities=15%  Similarity=0.142  Sum_probs=55.1

Q ss_pred             cCCcEEEEeCC----------------chhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCC
Q 021819            7 KEEETVCVTGA----------------NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD   70 (307)
Q Consensus         7 ~~~~~ilItGa----------------tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d   70 (307)
                      +++|+|+||||                ||+||.++++.|+++|+ +|+.+.++... .    .+   . ++.  ..|+++
T Consensus         6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga-~V~l~~~~~~l-~----~~---~-g~~--~~dv~~   73 (226)
T 1u7z_A            6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGA-NVTLVSGPVSL-P----TP---P-FVK--RVDVMT   73 (226)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTC-EEEEEECSCCC-C----CC---T-TEE--EEECCS
T ss_pred             CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCC-EEEEEECCccc-c----cC---C-CCe--EEccCc
Confidence            46789999999                69999999999999999 88888775421 1    00   0 333  357877


Q ss_pred             hhHHHHH----hcCccEEEEeccCCC
Q 021819           71 SGAVSRA----VEGCKGVFHVASPCT   92 (307)
Q Consensus        71 ~~~~~~~----~~~~d~vi~~a~~~~   92 (307)
                      .+++.+.    +.++|++||+||...
T Consensus        74 ~~~~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           74 ALEMEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             HHHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred             HHHHHHHHHHhcCCCCEEEECCcccC
Confidence            6655443    347899999999865

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.56  E-value=6e-08  Score=87.38  Aligned_cols=110  Identities=14%  Similarity=0.216  Sum_probs=75.7

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHC-CCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      .++++|+|+|+ |++|+.+++.|++. |+ +|++.+|+.++.+.+....     ++..+.+|+.|.+++.++++++|+||
T Consensus        21 l~~k~VlIiGA-GgiG~aia~~L~~~~g~-~V~v~~R~~~ka~~la~~~-----~~~~~~~D~~d~~~l~~~l~~~DvVI   93 (467)
T 2axq_A           21 HMGKNVLLLGS-GFVAQPVIDTLAANDDI-NVTVACRTLANAQALAKPS-----GSKAISLDVTDDSALDKVLADNDVVI   93 (467)
T ss_dssp             --CEEEEEECC-STTHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHGGG-----TCEEEECCTTCHHHHHHHHHTSSEEE
T ss_pred             CCCCEEEEECC-hHHHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHhc-----CCcEEEEecCCHHHHHHHHcCCCEEE
Confidence            45789999997 99999999999998 67 8999999766554443221     46677899999999999999999999


Q ss_pred             EeccCCCCCCCCCh----hhhhhhhhH--HHHHHHHHHHHhcCC
Q 021819           86 HVASPCTLEDPVDP----EKELILPAV--QGTLNVLEAAKRFGV  123 (307)
Q Consensus        86 ~~a~~~~~~~~~~~----~~~~~~~n~--~~~~~l~~~~~~~~~  123 (307)
                      |+++..........    ....+..+.  ..+..+++.+++.|+
T Consensus        94 n~tp~~~~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~aGv  137 (467)
T 2axq_A           94 SLIPYTFHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGI  137 (467)
T ss_dssp             ECSCGGGHHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHHTC
T ss_pred             ECCchhhhHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHcCC
Confidence            99886321000000    001112221  345778888888775

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.51  E-value=1e-06  Score=75.41  Aligned_cols=114  Identities=16%  Similarity=0.139  Sum_probs=77.5

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcccccCCCCCC-CceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGD-ANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      |||.|+||+|++|+.++..|+.+|. ++|.++++++... ....+..... .++....    ...+.+++++++|+||++
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~-~a~dL~~~~~~~~l~~~~----~t~d~~~a~~~aDvVvi~   75 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPG-VAADLSHIETRATVKGYL----GPEQLPDCLKGCDVVVIP   75 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHH-HHHHHTTSSSSCEEEEEE----SGGGHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHH-HHHHHhccCcCceEEEec----CCCCHHHHhCCCCEEEEC
Confidence            3899999999999999999998882 4899999876111 1111111100 0121111    123577788999999999


Q ss_pred             ccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCC-cEEEEec
Q 021819           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV-RRVVVTS  130 (307)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~iS  130 (307)
                      +|......  ....+.+..|+...+.+++.+.+.+. .++|++|
T Consensus        76 ag~~~~~g--~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~s  117 (314)
T 1mld_A           76 AGVPRKPG--MTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (314)
T ss_dssp             CSCCCCTT--CCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCcCCCCC--CcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            98754322  23457789999999999999988763 4677764

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.51  E-value=1e-07  Score=82.03  Aligned_cols=116  Identities=19%  Similarity=0.130  Sum_probs=76.6

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCC-Ce-----EEEEeCCCC--CCcc-cccCCCCCCCceEEEEcccCChhHHHHHhcC
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNY-TS-----INATVFPGS--DSSH-LFALPGAGDANLRVFEADVLDSGAVSRAVEG   80 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~-~~-----V~~~~r~~~--~~~~-~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~   80 (307)
                      +||.||||+|+||++++..|+..|. .+     +..+++.+.  ..+. ...+......-..    ++.......+.+++
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~----~~~~~~~~~~~~~d   79 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLK----DVIATDKEEIAFKD   79 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEE----EEEEESCHHHHTTT
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccC----CEEEcCCcHHHhCC
Confidence            5899999999999999999998875 34     788877532  1110 0001000000111    22222234567889


Q ss_pred             ccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc--EEEEecC
Q 021819           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR--RVVVTSS  131 (307)
Q Consensus        81 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~v~iSS  131 (307)
                      +|+||++||.....  -....+.++.|+...+.+++++.+++.+  +++.+|-
T Consensus        80 aDvVvitAg~prkp--G~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           80 LDVAILVGSMPRRD--GMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             CSEEEECCSCCCCT--TCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             CCEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            99999999865432  2345688999999999999999998754  5766663

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.44  E-value=3.2e-07  Score=70.01  Aligned_cols=76  Identities=17%  Similarity=0.281  Sum_probs=58.6

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC-CCCcccccCCCCCCCceEEEEcccCChhHHHHH-hcCccEEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFH   86 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~d~vi~   86 (307)
                      .++|+|+|+ |.+|+.+++.|.+.|+ +|+++++++ ...+.+.....   .++.++.+|.+|++.+.++ ++++|.||-
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~---~~~~~i~gd~~~~~~l~~a~i~~ad~vi~   77 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLG---DNADVIPGDSNDSSVLKKAGIDRCRAILA   77 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHC---TTCEEEESCTTSHHHHHHHTTTTCSEEEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhc---CCCeEEEcCCCCHHHHHHcChhhCCEEEE
Confidence            358999995 9999999999999999 899999864 22222221101   1678999999999999886 889999998


Q ss_pred             ecc
Q 021819           87 VAS   89 (307)
Q Consensus        87 ~a~   89 (307)
                      +.+
T Consensus        78 ~~~   80 (153)
T 1id1_A           78 LSD   80 (153)
T ss_dssp             CSS
T ss_pred             ecC
Confidence            853

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.38  E-value=1.1e-06  Score=68.99  Aligned_cols=73  Identities=18%  Similarity=0.079  Sum_probs=60.0

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHC-CCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHH--hcCccEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA--VEGCKGVF   85 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~--~~~~d~vi   85 (307)
                      +++|+|+| .|.+|+.+++.|.+. |+ +|++++++++..+.+...      ++..+.+|.++++.+.++  ++++|+||
T Consensus        39 ~~~v~IiG-~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~------g~~~~~gd~~~~~~l~~~~~~~~ad~vi  110 (183)
T 3c85_A           39 HAQVLILG-MGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSE------GRNVISGDATDPDFWERILDTGHVKLVL  110 (183)
T ss_dssp             TCSEEEEC-CSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHT------TCCEEECCTTCHHHHHTBCSCCCCCEEE
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHC------CCCEEEcCCCCHHHHHhccCCCCCCEEE
Confidence            56899998 599999999999999 99 899999987655544432      567788999998888776  78899999


Q ss_pred             Eecc
Q 021819           86 HVAS   89 (307)
Q Consensus        86 ~~a~   89 (307)
                      .+.+
T Consensus       111 ~~~~  114 (183)
T 3c85_A          111 LAMP  114 (183)
T ss_dssp             ECCS
T ss_pred             EeCC
Confidence            8754

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.37  E-value=6.5e-07  Score=67.20  Aligned_cols=73  Identities=15%  Similarity=0.167  Sum_probs=60.7

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHH-hcCccEEEEe
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHV   87 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~d~vi~~   87 (307)
                      .++|+|.|+ |.+|+.+++.|.+.|+ +|+++++++...+.+...      ++..+.+|.++++.+.++ ++++|+||-+
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~------g~~~i~gd~~~~~~l~~a~i~~ad~vi~~   78 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDI-PLVVIETSRTRVDELRER------GVRAVLGNAANEEIMQLAHLECAKWLILT   78 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHT------TCEEEESCTTSHHHHHHTTGGGCSEEEEC
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHc------CCCEEECCCCCHHHHHhcCcccCCEEEEE
Confidence            458999996 9999999999999999 999999987666555443      678899999999988775 5788999987


Q ss_pred             cc
Q 021819           88 AS   89 (307)
Q Consensus        88 a~   89 (307)
                      .+
T Consensus        79 ~~   80 (140)
T 3fwz_A           79 IP   80 (140)
T ss_dssp             CS
T ss_pred             CC
Confidence            44

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.36  E-value=7e-07  Score=72.33  Aligned_cols=72  Identities=13%  Similarity=0.123  Sum_probs=59.0

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHH-hcCccEEEEec
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHVA   88 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~d~vi~~a   88 (307)
                      |+|+|+|+ |.+|+++++.|.++|+ +|++++++++..+.+....     ++.++.+|.++++.+.++ ++++|+||-+.
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~-----~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~   73 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKL-----KATIIHGDGSHKEILRDAEVSKNDVVVILT   73 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHS-----SSEEEESCTTSHHHHHHHTCCTTCEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHc-----CCeEEEcCCCCHHHHHhcCcccCCEEEEec
Confidence            37999996 9999999999999999 8999998776554433211     567899999999998876 78999999764

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.30  E-value=5.4e-07  Score=71.81  Aligned_cols=97  Identities=14%  Similarity=0.045  Sum_probs=64.7

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHH---hc--Ccc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA---VE--GCK   82 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~---~~--~~d   82 (307)
                      .+++|+|+||+|.||..+++.+...|+ +|++++|+++..+.+..+      +... ..|..+.+..+.+   ..  ++|
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~~------g~~~-~~d~~~~~~~~~~~~~~~~~~~D  109 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRL------GVEY-VGDSRSVDFADEILELTDGYGVD  109 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTT------CCSE-EEETTCSTHHHHHHHHTTTCCEE
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc------CCCE-EeeCCcHHHHHHHHHHhCCCCCe
Confidence            468999999999999999999999999 899999876554444333      2222 2466665433333   22  589


Q ss_pred             EEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCc
Q 021819           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (307)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~  132 (307)
                      +||+++|..                  .....++.++..  +++|.+++.
T Consensus       110 ~vi~~~g~~------------------~~~~~~~~l~~~--G~~v~~g~~  139 (198)
T 1pqw_A          110 VVLNSLAGE------------------AIQRGVQILAPG--GRFIELGKK  139 (198)
T ss_dssp             EEEECCCTH------------------HHHHHHHTEEEE--EEEEECSCG
T ss_pred             EEEECCchH------------------HHHHHHHHhccC--CEEEEEcCC
Confidence            999998630                  122334444443  589998864

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=98.14  E-value=4e-06  Score=71.71  Aligned_cols=119  Identities=13%  Similarity=0.155  Sum_probs=66.5

Q ss_pred             CccccccCCcEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcc----cccCCCCCCCceEEEEcccCChhHHH
Q 021819            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFALPGAGDANLRVFEADVLDSGAVS   75 (307)
Q Consensus         1 m~~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~i~~D~~d~~~~~   75 (307)
                      |.+.++++++||.|+|+ |.+|+.++..|+..|. .+|+.++++..+.+.    +........ .+.....   ++    
T Consensus         1 ~~~~~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~-~~~i~~~---~~----   71 (326)
T 3vku_A            1 MASITDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTS-PKKIYSA---EY----   71 (326)
T ss_dssp             ------CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSC-CCEEEEC---CG----
T ss_pred             CcccccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcC-CcEEEEC---cH----
Confidence            66777888899999996 9999999999999886 589999886543321    111000000 2333322   22    


Q ss_pred             HHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEec
Q 021819           76 RAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTS  130 (307)
Q Consensus        76 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~iS  130 (307)
                      +.++++|+||.+||......  ....+.++.|....+.+.+.+.+++-. .++.+|
T Consensus        72 ~a~~~aDiVvi~ag~~~kpG--~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt  125 (326)
T 3vku_A           72 SDAKDADLVVITAGAPQKPG--ETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             GGGTTCSEEEECCCCC------------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred             HHhcCCCEEEECCCCCCCCC--chHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence            35789999999998744321  234577889999999999999887633 455544

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=98.13  E-value=8.1e-07  Score=74.32  Aligned_cols=33  Identities=24%  Similarity=0.374  Sum_probs=26.8

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHC-CCCeEEEEeC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDN-NYTSINATVF   42 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~-g~~~V~~~~r   42 (307)
                      +++|.|+|++|.+|+.+++.+.+. ++ +|++...
T Consensus         5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~-elva~~d   38 (273)
T 1dih_A            5 NIRVAIAGAGGRMGRQLIQAALALEGV-QLGAALE   38 (273)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTE-ECCCEEC
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEe
Confidence            459999999999999999998865 66 7765444

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.13  E-value=9.5e-07  Score=76.16  Aligned_cols=113  Identities=14%  Similarity=0.105  Sum_probs=74.5

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcc----cccCCCCCCCceEEEEcccCChhHHHHHhcCcc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFALPGAGDANLRVFEADVLDSGAVSRAVEGCK   82 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d   82 (307)
                      +++||.|+|++|++|+.++..|+..|. .+|++++.+..+.+.    +.... ....++.+       ..+..+.++++|
T Consensus         7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~-~~~~~i~~-------t~d~~~al~dAD   78 (343)
T 3fi9_A            7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCG-FEGLNLTF-------TSDIKEALTDAK   78 (343)
T ss_dssp             CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHC-CTTCCCEE-------ESCHHHHHTTEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCc-CCCCceEE-------cCCHHHHhCCCC
Confidence            357999999999999999999999984 489999886543221    11100 00002211       123556788999


Q ss_pred             EEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcE--EEEec
Q 021819           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR--VVVTS  130 (307)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~v~iS  130 (307)
                      +||.+||.....  -....+.+..|....+.+.+.+.+++-..  ++.+|
T Consensus        79 vVvitaG~p~kp--G~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvs  126 (343)
T 3fi9_A           79 YIVSSGGAPRKE--GMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIF  126 (343)
T ss_dssp             EEEECCC---------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECS
T ss_pred             EEEEccCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEec
Confidence            999999874332  23456789999999999999999886433  45554

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.10  E-value=2.7e-06  Score=74.51  Aligned_cols=77  Identities=13%  Similarity=0.047  Sum_probs=59.7

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      .++++|+|+|+ |.||+.+++.|...|+ +|++++|++...+.+....     +.. +.+|..+.+++.++++++|+||+
T Consensus       164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~-----g~~-~~~~~~~~~~l~~~~~~~DvVi~  235 (369)
T 2eez_A          164 VAPASVVILGG-GTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVF-----GGR-VITLTATEANIKKSVQHADLLIG  235 (369)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHT-----TTS-EEEEECCHHHHHHHHHHCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhc-----Cce-EEEecCCHHHHHHHHhCCCEEEE
Confidence            55789999999 9999999999999999 9999999765544433211     111 44677788889899999999999


Q ss_pred             eccCC
Q 021819           87 VASPC   91 (307)
Q Consensus        87 ~a~~~   91 (307)
                      +++..
T Consensus       236 ~~g~~  240 (369)
T 2eez_A          236 AVLVP  240 (369)
T ss_dssp             CCC--
T ss_pred             CCCCC
Confidence            98863

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.06  E-value=5.5e-06  Score=71.98  Aligned_cols=75  Identities=20%  Similarity=0.208  Sum_probs=54.9

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-----Ccc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----GCK   82 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----~~d   82 (307)
                      .+++|+|+||+|.||..+++.+...|+ +|++++|++.+.+.+..+      +... ..|+.+.+++.+.+.     ++|
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~------g~~~-~~d~~~~~~~~~~~~~~~~~~~D  240 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSI------GGEV-FIDFTKEKDIVGAVLKATDGGAH  240 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHHT------TCCE-EEETTTCSCHHHHHHHHHTSCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHHc------CCce-EEecCccHhHHHHHHHHhCCCCC
Confidence            467999999999999999999999999 999999877665555443      2222 237664333433332     689


Q ss_pred             EEEEeccC
Q 021819           83 GVFHVASP   90 (307)
Q Consensus        83 ~vi~~a~~   90 (307)
                      +||+++|.
T Consensus       241 ~vi~~~g~  248 (347)
T 2hcy_A          241 GVINVSVS  248 (347)
T ss_dssp             EEEECSSC
T ss_pred             EEEECCCc
Confidence            99999874

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=98.04  E-value=4.6e-06  Score=68.22  Aligned_cols=70  Identities=13%  Similarity=0.053  Sum_probs=56.9

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHH-hcCccEEEEe
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHV   87 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~d~vi~~   87 (307)
                      .++|+|+|+ |.+|+.+++.|.+.|+  |++++++++..+.+. .      ++.++.+|.+|++.+.++ ++++|.||.+
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~--v~vid~~~~~~~~~~-~------~~~~i~gd~~~~~~l~~a~i~~ad~vi~~   78 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV--FVLAEDENVRKKVLR-S------GANFVHGDPTRVSDLEKANVRGARAVIVD   78 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE--EEEESCGGGHHHHHH-T------TCEEEESCTTCHHHHHHTTCTTCSEEEEC
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe--EEEEECCHHHHHHHh-c------CCeEEEcCCCCHHHHHhcCcchhcEEEEc
Confidence            458999997 9999999999998887  778887765444333 1      678999999999999877 7899999987


Q ss_pred             c
Q 021819           88 A   88 (307)
Q Consensus        88 a   88 (307)
                      .
T Consensus        79 ~   79 (234)
T 2aef_A           79 L   79 (234)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=98.03  E-value=2.1e-05  Score=67.41  Aligned_cols=114  Identities=13%  Similarity=0.112  Sum_probs=76.3

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcc----cccCCCCCCCceEEEEcccCChhHHHHHhcCc
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFALPGAGDANLRVFEADVLDSGAVSRAVEGC   81 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~   81 (307)
                      ++++||.|+|+ |++|+.++..|+..|. .+|++++++..+.+.    +.........++.....   ++    +.++++
T Consensus         3 ~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~---~~----~a~~~a   74 (326)
T 3pqe_A            3 KHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYG---TY----EDCKDA   74 (326)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEE---CG----GGGTTC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeC---cH----HHhCCC
Confidence            34679999996 9999999999999886 489999886543322    11110000003333322   22    357899


Q ss_pred             cEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEec
Q 021819           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTS  130 (307)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~iS  130 (307)
                      |+||.++|.....  -....+.+..|......+.+.+.+.+-. .++.+|
T Consensus        75 DvVvi~ag~p~kp--G~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt  122 (326)
T 3pqe_A           75 DIVCICAGANQKP--GETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT  122 (326)
T ss_dssp             SEEEECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             CEEEEecccCCCC--CccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC
Confidence            9999999864332  2335678899999999999999888643 455554

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.01  E-value=4.5e-06  Score=72.10  Aligned_cols=75  Identities=15%  Similarity=0.145  Sum_probs=53.8

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHh-----cCcc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV-----EGCK   82 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~-----~~~d   82 (307)
                      .+++|+||||+|.||..+++.+...|+ +|+++++++.+.+.++.+      +.. ...|..+.+++.+.+     .++|
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~~------g~~-~~~d~~~~~~~~~~~~~~~~~~~d  216 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQI------GFD-AAFNYKTVNSLEEALKKASPDGYD  216 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT------TCS-EEEETTSCSCHHHHHHHHCTTCEE
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhc------CCc-EEEecCCHHHHHHHHHHHhCCCCe
Confidence            468999999999999999999999999 999999876555544443      221 124666622233322     2589


Q ss_pred             EEEEeccC
Q 021819           83 GVFHVASP   90 (307)
Q Consensus        83 ~vi~~a~~   90 (307)
                      ++|+++|.
T Consensus       217 ~vi~~~g~  224 (333)
T 1v3u_A          217 CYFDNVGG  224 (333)
T ss_dssp             EEEESSCH
T ss_pred             EEEECCCh
Confidence            99999873

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=98.00  E-value=3.2e-06  Score=72.87  Aligned_cols=123  Identities=13%  Similarity=0.138  Sum_probs=76.7

Q ss_pred             CccccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccc-ccCC-----CCCCCceEEEEcccCChhHH
Q 021819            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALP-----GAGDANLRVFEADVLDSGAV   74 (307)
Q Consensus         1 m~~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~-~~~~-----~~~~~~~~~i~~D~~d~~~~   74 (307)
                      |+++|..+.+||.|+|| |.+|..++..|...|+.+|.+.+++++..+.. ..+.     .....++..       ..++
T Consensus         1 ~~~~~~~~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-------t~d~   72 (331)
T 1pzg_A            1 MAPALVQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-------EYSY   72 (331)
T ss_dssp             --CCCCSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-------ECSH
T ss_pred             CCcCcCCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-------eCCH
Confidence            55555555679999998 99999999999999874588898876544331 1000     000002211       1234


Q ss_pred             HHHhcCccEEEEeccCCCCCCCCC---hhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           75 SRAVEGCKGVFHVASPCTLEDPVD---PEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        75 ~~~~~~~d~vi~~a~~~~~~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      ++.++++|+||-+++.........   ........|....+.+.+.+.+..-.-++.+.|
T Consensus        73 ~ea~~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  132 (331)
T 1pzg_A           73 EAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  132 (331)
T ss_dssp             HHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             HHHhCCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence            456899999999997643221100   235667788888889999988875333444444

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.99  E-value=4.5e-06  Score=71.10  Aligned_cols=81  Identities=9%  Similarity=0.037  Sum_probs=57.9

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC---CCCccccc-CCCCCCCceEEEEcccCChhHHHHHhcCcc
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG---SDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVEGCK   82 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~---~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d   82 (307)
                      .++++++|+|+ |++|++++..|.+.|..+|++..|++   ++.+.+.. +....  +......++.+.+++.+.+.++|
T Consensus       152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~--~~~~~~~~~~~~~~l~~~l~~aD  228 (315)
T 3tnl_A          152 IIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKT--DCKAQLFDIEDHEQLRKEIAESV  228 (315)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS--SCEEEEEETTCHHHHHHHHHTCS
T ss_pred             ccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhc--CCceEEeccchHHHHHhhhcCCC
Confidence            45789999997 89999999999999987899999983   33332221 10000  22233446667777888889999


Q ss_pred             EEEEeccC
Q 021819           83 GVFHVASP   90 (307)
Q Consensus        83 ~vi~~a~~   90 (307)
                      +|||+.+.
T Consensus       229 iIINaTp~  236 (315)
T 3tnl_A          229 IFTNATGV  236 (315)
T ss_dssp             EEEECSST
T ss_pred             EEEECccC
Confidence            99999764

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.97  E-value=6.9e-06  Score=71.24  Aligned_cols=97  Identities=14%  Similarity=0.059  Sum_probs=65.8

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChh---HHHHHhc--Ccc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AVSRAVE--GCK   82 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~---~~~~~~~--~~d   82 (307)
                      .+++|+|+||+|.+|..+++.+...|+ +|+++++++.+.+.++.+      +...+ .|..+.+   .+.+...  ++|
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~------ga~~~-~d~~~~~~~~~~~~~~~~~~~d  237 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKAL------GADET-VNYTHPDWPKEVRRLTGGKGAD  237 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH------TCSEE-EETTSTTHHHHHHHHTTTTCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhc------CCCEE-EcCCcccHHHHHHHHhCCCCce
Confidence            467999999999999999999999999 999999976665555443      22221 3665543   2333332  689


Q ss_pred             EEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCc
Q 021819           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (307)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~  132 (307)
                      +||+++|. ..                 ....++.++..  ++++.+++.
T Consensus       238 ~vi~~~g~-~~-----------------~~~~~~~l~~~--G~~v~~g~~  267 (343)
T 2eih_A          238 KVVDHTGA-LY-----------------FEGVIKATANG--GRIAIAGAS  267 (343)
T ss_dssp             EEEESSCS-SS-----------------HHHHHHHEEEE--EEEEESSCC
T ss_pred             EEEECCCH-HH-----------------HHHHHHhhccC--CEEEEEecC
Confidence            99999982 11                 22344445444  489888763

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.95  E-value=4.5e-06  Score=71.90  Aligned_cols=74  Identities=12%  Similarity=0.054  Sum_probs=53.8

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHh---c--Ccc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV---E--GCK   82 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~---~--~~d   82 (307)
                      .+++|+|+||+|.||..+++.+...|+ +|+++++++.+.+.+..+      +... ..|..+.+..+.+.   .  ++|
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~------g~~~-~~~~~~~~~~~~~~~~~~~~~~D  211 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKA------GAWQ-VINYREEDLVERLKEITGGKKVR  211 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHH------TCSE-EEETTTSCHHHHHHHHTTTCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc------CCCE-EEECCCccHHHHHHHHhCCCCce
Confidence            468999999999999999999999999 999999876555544443      2221 13665544333332   2  589


Q ss_pred             EEEEecc
Q 021819           83 GVFHVAS   89 (307)
Q Consensus        83 ~vi~~a~   89 (307)
                      ++|+++|
T Consensus       212 ~vi~~~g  218 (327)
T 1qor_A          212 VVYDSVG  218 (327)
T ss_dssp             EEEECSC
T ss_pred             EEEECCc
Confidence            9999987

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.92  E-value=8.9e-06  Score=70.79  Aligned_cols=75  Identities=15%  Similarity=0.103  Sum_probs=54.4

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHH---HHhc--Ccc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVS---RAVE--GCK   82 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~---~~~~--~~d   82 (307)
                      .+++|+|+||+|.||..+++.+...|+ +|+++++++.+.+.++.+      +... ..|..+.+..+   +...  ++|
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~------ga~~-~~d~~~~~~~~~~~~~~~~~~~D  241 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQN------GAHE-VFNHREVNYIDKIKKYVGEKGID  241 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT------TCSE-EEETTSTTHHHHHHHHHCTTCEE
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHc------CCCE-EEeCCCchHHHHHHHHcCCCCcE
Confidence            467999999999999999999999999 899999876665554443      2221 24555544333   3332  689


Q ss_pred             EEEEeccC
Q 021819           83 GVFHVASP   90 (307)
Q Consensus        83 ~vi~~a~~   90 (307)
                      +||+++|.
T Consensus       242 ~vi~~~G~  249 (351)
T 1yb5_A          242 IIIEMLAN  249 (351)
T ss_dssp             EEEESCHH
T ss_pred             EEEECCCh
Confidence            99999874

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.91  E-value=7.4e-06  Score=70.74  Aligned_cols=75  Identities=15%  Similarity=0.106  Sum_probs=54.1

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhH---HHHHh--cCcc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA---VSRAV--EGCK   82 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~---~~~~~--~~~d   82 (307)
                      .+++|+|+||+|.||..+++.+...|+ +|++++|++.+.+.++.+      +... ..|..+.+.   +.+..  .++|
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~------g~~~-~~d~~~~~~~~~i~~~~~~~~~d  216 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKL------GCHH-TINYSTQDFAEVVREITGGKGVD  216 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH------TCSE-EEETTTSCHHHHHHHHHTTCCEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc------CCCE-EEECCCHHHHHHHHHHhCCCCCe
Confidence            467999999999999999999999999 999999976555544443      2221 136555433   33333  2689


Q ss_pred             EEEEeccC
Q 021819           83 GVFHVASP   90 (307)
Q Consensus        83 ~vi~~a~~   90 (307)
                      ++|+++|.
T Consensus       217 ~vi~~~g~  224 (333)
T 1wly_A          217 VVYDSIGK  224 (333)
T ss_dssp             EEEECSCT
T ss_pred             EEEECCcH
Confidence            99999885

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.90  E-value=2.8e-05  Score=68.94  Aligned_cols=73  Identities=15%  Similarity=0.173  Sum_probs=61.3

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHH-hcCccEEEEe
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHV   87 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~d~vi~~   87 (307)
                      .++|+|+|. |-+|+.+++.|.+.|+ .|+++++++...+.+...      ++.++.+|.++++.+.++ ++++|+||-+
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~------g~~vi~GDat~~~~L~~agi~~A~~viv~   75 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKF------GMKVFYGDATRMDLLESAGAAKAEVLINA   75 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHT------TCCCEESCTTCHHHHHHTTTTTCSEEEEC
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhC------CCeEEEcCCCCHHHHHhcCCCccCEEEEC
Confidence            357999996 9999999999999999 899999987765555443      677899999999999887 7889999887


Q ss_pred             cc
Q 021819           88 AS   89 (307)
Q Consensus        88 a~   89 (307)
                      .+
T Consensus        76 ~~   77 (413)
T 3l9w_A           76 ID   77 (413)
T ss_dssp             CS
T ss_pred             CC
Confidence            43

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.89  E-value=1.4e-05  Score=69.18  Aligned_cols=98  Identities=18%  Similarity=0.162  Sum_probs=59.7

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCC-----CCeEEEEeCCCCCCcccccCCCC-CC-CceEEEEcccCChhHHHHHhcCc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNN-----YTSINATVFPGSDSSHLFALPGA-GD-ANLRVFEADVLDSGAVSRAVEGC   81 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g-----~~~V~~~~r~~~~~~~~~~~~~~-~~-~~~~~i~~D~~d~~~~~~~~~~~   81 (307)
                      |++|.|.||||++|+.|++.|.+.+     ..+++.+.++.+..+.+....+. .. ..+.+  .|+ +++    .++++
T Consensus         9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~--~~~-~~~----~~~~~   81 (352)
T 2nqt_A            9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVV--EPT-EAA----VLGGH   81 (352)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBC--EEC-CHH----HHTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeee--ccC-CHH----HhcCC
Confidence            5799999999999999999999887     54677775432221212211100 00 01111  122 222    24589


Q ss_pred             cEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcc
Q 021819           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS  133 (307)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~  133 (307)
                      |+||.|.+...                  +..+++.+ +.|. ++|-+|+..
T Consensus        82 DvVf~alg~~~------------------s~~~~~~~-~~G~-~vIDlSa~~  113 (352)
T 2nqt_A           82 DAVFLALPHGH------------------SAVLAQQL-SPET-LIIDCGADF  113 (352)
T ss_dssp             SEEEECCTTSC------------------CHHHHHHS-CTTS-EEEECSSTT
T ss_pred             CEEEECCCCcc------------------hHHHHHHH-hCCC-EEEEECCCc
Confidence            99999976532                  33566667 6674 688888754

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.87  E-value=8.9e-06  Score=70.86  Aligned_cols=75  Identities=8%  Similarity=-0.060  Sum_probs=54.3

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHH---HHhc--Ccc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVS---RAVE--GCK   82 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~---~~~~--~~d   82 (307)
                      .+++|+|+||+|.||..+++.+...|+ +|+++++++++.+.++.+      +... ..|..+.+..+   +...  ++|
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~------g~~~-~~~~~~~~~~~~~~~~~~~~~~d  233 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKL------GAAA-GFNYKKEDFSEATLKFTKGAGVN  233 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHH------TCSE-EEETTTSCHHHHHHHHTTTSCEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc------CCcE-EEecCChHHHHHHHHHhcCCCce
Confidence            467999999999999999999999999 899999876655554443      2221 24555543333   3332  689


Q ss_pred             EEEEeccC
Q 021819           83 GVFHVASP   90 (307)
Q Consensus        83 ~vi~~a~~   90 (307)
                      ++|+|+|.
T Consensus       234 ~vi~~~G~  241 (354)
T 2j8z_A          234 LILDCIGG  241 (354)
T ss_dssp             EEEESSCG
T ss_pred             EEEECCCc
Confidence            99999875

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.85  E-value=9.7e-06  Score=70.33  Aligned_cols=75  Identities=17%  Similarity=0.153  Sum_probs=53.2

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCCCCCceEEEEcccCChh----HHHHHh-cCc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSG----AVSRAV-EGC   81 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~----~~~~~~-~~~   81 (307)
                      .+++|+|+||+|.||..+++.+...|+ +|+++++++.+.+.++ .+      +... ..|..+.+    .+.+.. .++
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~~------g~~~-~~d~~~~~~~~~~~~~~~~~~~  226 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEKVDLLKTKF------GFDD-AFNYKEESDLTAALKRCFPNGI  226 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTS------CCSE-EEETTSCSCSHHHHHHHCTTCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc------CCce-EEecCCHHHHHHHHHHHhCCCC
Confidence            468999999999999999999999999 8999998766655554 33      2221 13555432    233222 268


Q ss_pred             cEEEEeccC
Q 021819           82 KGVFHVASP   90 (307)
Q Consensus        82 d~vi~~a~~   90 (307)
                      |+||+++|.
T Consensus       227 d~vi~~~g~  235 (345)
T 2j3h_A          227 DIYFENVGG  235 (345)
T ss_dssp             EEEEESSCH
T ss_pred             cEEEECCCH
Confidence            999999863

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.82  E-value=1.6e-05  Score=68.68  Aligned_cols=75  Identities=16%  Similarity=0.128  Sum_probs=54.6

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccc-ccCCCCCCCceEEEEcccCChhHHHHHh----cCcc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAV----EGCK   82 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~i~~D~~d~~~~~~~~----~~~d   82 (307)
                      .+++|+|+||+|.||..+++.+...|+ +|+++++++.+.+.+ +.+      +...+ .|..+.+..+.+.    .++|
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~~------g~~~~-~~~~~~~~~~~~~~~~~~~~d  220 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVEEL------GFDGA-IDYKNEDLAAGLKRECPKGID  220 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTT------CCSEE-EETTTSCHHHHHHHHCTTCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc------CCCEE-EECCCHHHHHHHHHhcCCCce
Confidence            478999999999999999999999999 999999987666655 444      22221 3555544333322    2689


Q ss_pred             EEEEeccC
Q 021819           83 GVFHVASP   90 (307)
Q Consensus        83 ~vi~~a~~   90 (307)
                      +||+++|.
T Consensus       221 ~vi~~~g~  228 (336)
T 4b7c_A          221 VFFDNVGG  228 (336)
T ss_dssp             EEEESSCH
T ss_pred             EEEECCCc
Confidence            99999874

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.81  E-value=5e-06  Score=66.88  Aligned_cols=72  Identities=17%  Similarity=0.076  Sum_probs=49.0

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEE-cccCChhHHHHHhcCccEEEEec
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFE-ADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~-~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      |+|+|+||+|++|+.+++.|++.|+ +|++++|+++..+.+....     +. .+. .|+. .+++.++++++|+||++.
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~-----~~-~~~~~~~~-~~~~~~~~~~~D~Vi~~~   72 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGH-EIVVGSRREEKAEAKAAEY-----RR-IAGDASIT-GMKNEDAAEACDIAVLTI   72 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSHHHHHHHHHHH-----HH-HHSSCCEE-EEEHHHHHHHCSEEEECS
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh-----cc-ccccCCCC-hhhHHHHHhcCCEEEEeC
Confidence            3799999999999999999999999 8999998755443322100     00 000 1222 234556678899999986


Q ss_pred             c
Q 021819           89 S   89 (307)
Q Consensus        89 ~   89 (307)
                      .
T Consensus        73 ~   73 (212)
T 1jay_A           73 P   73 (212)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.79  E-value=1.9e-05  Score=68.81  Aligned_cols=73  Identities=14%  Similarity=0.099  Sum_probs=51.9

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHH---HHhc-CccEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVS---RAVE-GCKGV   84 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~---~~~~-~~d~v   84 (307)
                      ++|+|+||+|.||..+++.+...|+.+|+++++++.+.+.+.. +      +... ..|..+.+..+   +... ++|++
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~------g~~~-~~d~~~~~~~~~~~~~~~~~~d~v  234 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL------GFDA-AINYKKDNVAEQLRESCPAGVDVY  234 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS------CCSE-EEETTTSCHHHHHHHHCTTCEEEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc------CCce-EEecCchHHHHHHHHhcCCCCCEE
Confidence            7999999999999999999999998679999887655444443 3      2221 24665543322   2222 58999


Q ss_pred             EEecc
Q 021819           85 FHVAS   89 (307)
Q Consensus        85 i~~a~   89 (307)
                      |+|+|
T Consensus       235 i~~~G  239 (357)
T 2zb4_A          235 FDNVG  239 (357)
T ss_dssp             EESCC
T ss_pred             EECCC
Confidence            99987

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.71  E-value=6.9e-05  Score=65.53  Aligned_cols=74  Identities=15%  Similarity=0.150  Sum_probs=56.6

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      .+.+|+|+|+ |.||...++.+...|. +|+++++++.+.+.+. .+      +...+ .|..+.+.+.++..++|+||+
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~l------Ga~~v-~~~~~~~~~~~~~~~~D~vid  257 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALKNF------GADSF-LVSRDQEQMQAAAGTLDGIID  257 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHHTS------CCSEE-EETTCHHHHHHTTTCEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhc------CCceE-EeccCHHHHHHhhCCCCEEEE
Confidence            5679999996 9999999999999999 8999998776655444 33      22221 366666677776678999999


Q ss_pred             eccC
Q 021819           87 VASP   90 (307)
Q Consensus        87 ~a~~   90 (307)
                      ++|.
T Consensus       258 ~~g~  261 (366)
T 1yqd_A          258 TVSA  261 (366)
T ss_dssp             CCSS
T ss_pred             CCCc
Confidence            9885

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.69  E-value=5.8e-05  Score=64.11  Aligned_cols=74  Identities=20%  Similarity=0.112  Sum_probs=55.2

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      .+++|+|+||+|.+|...++.+...|. +|+++++++.+.+.++.+      +...+ .|..+.+++.+.+.++|+||+ 
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~------ga~~~-~~~~~~~~~~~~~~~~d~vid-  195 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLAL------GAEEA-ATYAEVPERAKAWGGLDLVLE-  195 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHT------TCSEE-EEGGGHHHHHHHTTSEEEEEE-
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhc------CCCEE-EECCcchhHHHHhcCceEEEE-
Confidence            467999999999999999999999999 999999987776666554      22222 355441334444478999999 


Q ss_pred             ccC
Q 021819           88 ASP   90 (307)
Q Consensus        88 a~~   90 (307)
                      +|.
T Consensus       196 ~g~  198 (302)
T 1iz0_A          196 VRG  198 (302)
T ss_dssp             CSC
T ss_pred             CCH
Confidence            875

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.67  E-value=3e-05  Score=67.52  Aligned_cols=75  Identities=15%  Similarity=0.079  Sum_probs=54.4

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHh----cCccE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV----EGCKG   83 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~----~~~d~   83 (307)
                      .+++|+|+||+|.||...++.+...|. +|+++++++.+.+.++++      +...+ .|..+.+..+.+.    .++|+
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~l------Ga~~~-~~~~~~~~~~~~~~~~~~g~Dv  238 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERL------GAKRG-INYRSEDFAAVIKAETGQGVDI  238 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH------TCSEE-EETTTSCHHHHHHHHHSSCEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc------CCCEE-EeCCchHHHHHHHHHhCCCceE
Confidence            467999999999999999999999999 899999987766655554      22211 3444443322222    26899


Q ss_pred             EEEeccC
Q 021819           84 VFHVASP   90 (307)
Q Consensus        84 vi~~a~~   90 (307)
                      ||+++|.
T Consensus       239 vid~~g~  245 (353)
T 4dup_A          239 ILDMIGA  245 (353)
T ss_dssp             EEESCCG
T ss_pred             EEECCCH
Confidence            9999875

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.66  E-value=0.0002  Score=61.18  Aligned_cols=114  Identities=15%  Similarity=0.156  Sum_probs=70.2

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcc-cccCCCC--CCCceEEEEcccCChhHHHHHhcCccE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH-LFALPGA--GDANLRVFEADVLDSGAVSRAVEGCKG   83 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~-~~~~~~~--~~~~~~~i~~D~~d~~~~~~~~~~~d~   83 (307)
                      +++||.|+|+ |++|..++..|+.+|. .+|++++.+..+.+. ...+...  ....+++. .  .+    .+.++++|+
T Consensus         6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~----~~a~~~aDv   77 (318)
T 1y6j_A            6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GD----YSDVKDCDV   77 (318)
T ss_dssp             -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C----GGGGTTCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CC----HHHhCCCCE
Confidence            3468999998 9999999999999874 579999987655432 1111110  00022222 1  22    234789999


Q ss_pred             EEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      ||.+++......  ....+....|+.....+.+.+.+.+-..+|.+.|
T Consensus        78 Vii~~g~p~k~g--~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (318)
T 1y6j_A           78 IVVTAGANRKPG--ETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  123 (318)
T ss_dssp             EEECCCC--------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             EEEcCCCCCCCC--cCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEec
Confidence            999998644321  2345678899999999999998875333444444

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.66  E-value=2.4e-05  Score=68.27  Aligned_cols=77  Identities=17%  Similarity=0.111  Sum_probs=56.3

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      .+.++|+|+|+ |.+|+.+++.|...|. +|++++|++.+.+.+......   .+..   +..+.+++.+.+.++|+||+
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~DvVI~  236 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGS---RVEL---LYSNSAEIETAVAEADLLIG  236 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGG---GSEE---EECCHHHHHHHHHTCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCc---eeEe---eeCCHHHHHHHHcCCCEEEE
Confidence            34579999998 9999999999999999 999999987665544332100   1211   22345667777889999999


Q ss_pred             eccCC
Q 021819           87 VASPC   91 (307)
Q Consensus        87 ~a~~~   91 (307)
                      +++..
T Consensus       237 ~~~~~  241 (361)
T 1pjc_A          237 AVLVP  241 (361)
T ss_dssp             CCCCT
T ss_pred             CCCcC
Confidence            98763

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.66  E-value=1.3e-05  Score=67.18  Aligned_cols=75  Identities=15%  Similarity=0.126  Sum_probs=50.7

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      .++++++|+|+ |.+|+.+++.|.+.|. +|++.+|+.++.+.+........ .+     +..+.+++.+  .++|+|||
T Consensus       117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~-~V~v~~R~~~~~~~la~~~~~~~-~~-----~~~~~~~~~~--~~~DivVn  186 (271)
T 1nyt_A          117 RPGLRILLIGA-GGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTG-SI-----QALSMDELEG--HEFDLIIN  186 (271)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGS-SE-----EECCSGGGTT--CCCSEEEE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHhhccC-Ce-----eEecHHHhcc--CCCCEEEE
Confidence            35789999998 7899999999999997 99999997655444332111000 11     2223233322  58999999


Q ss_pred             eccCC
Q 021819           87 VASPC   91 (307)
Q Consensus        87 ~a~~~   91 (307)
                      +++..
T Consensus       187 ~t~~~  191 (271)
T 1nyt_A          187 ATSSG  191 (271)
T ss_dssp             CCSCG
T ss_pred             CCCCC
Confidence            99864

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.65  E-value=0.00011  Score=63.55  Aligned_cols=98  Identities=10%  Similarity=0.098  Sum_probs=59.5

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      |++|.|.||+|++|+.+++.|.+.+..+++.+.++.+....+......-. +.  ....+.+.+   + +.++|+||.+.
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~-g~--~~~~~~~~~---~-~~~vDvV~~a~   76 (345)
T 2ozp_A            4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLR-GR--TNLKFVPPE---K-LEPADILVLAL   76 (345)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGT-TT--CCCBCBCGG---G-CCCCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhc-Cc--ccccccchh---H-hcCCCEEEEcC
Confidence            46999999999999999999987755477776664333222221100000 00  001222322   2 47899999997


Q ss_pred             cCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCc
Q 021819           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (307)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~  132 (307)
                      +...                  +..+++.+.+.|. ++|-.|+.
T Consensus        77 g~~~------------------s~~~a~~~~~aG~-~VId~Sa~  101 (345)
T 2ozp_A           77 PHGV------------------FAREFDRYSALAP-VLVDLSAD  101 (345)
T ss_dssp             CTTH------------------HHHTHHHHHTTCS-EEEECSST
T ss_pred             CcHH------------------HHHHHHHHHHCCC-EEEEcCcc
Confidence            6521                  3455666667775 58888874

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.64  E-value=8.9e-05  Score=61.93  Aligned_cols=71  Identities=10%  Similarity=0.083  Sum_probs=53.5

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      .++++++|+|+ |.+|+.++..|.+.|..+|++..|+.++.+.+..       .+..+     ..+++.+.+.++|+|||
T Consensus       115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~-------~~~~~-----~~~~~~~~~~~aDiVIn  181 (277)
T 3don_A          115 IEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL-------NINKI-----NLSHAESHLDEFDIIIN  181 (277)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS-------CCEEE-----CHHHHHHTGGGCSEEEE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-------hcccc-----cHhhHHHHhcCCCEEEE
Confidence            35689999996 8999999999999998789999998766554432       22222     34567777889999999


Q ss_pred             eccC
Q 021819           87 VASP   90 (307)
Q Consensus        87 ~a~~   90 (307)
                      +.+.
T Consensus       182 aTp~  185 (277)
T 3don_A          182 TTPA  185 (277)
T ss_dssp             CCC-
T ss_pred             CccC
Confidence            9754

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.64  E-value=2.9e-05  Score=65.98  Aligned_cols=82  Identities=13%  Similarity=0.035  Sum_probs=55.5

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCC---CCccccc-CCCCCCCceEEEEcccCChhHHHHHhcCcc
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS---DSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVEGCK   82 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~---~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d   82 (307)
                      .++++++|+|+ |++|++++..|.+.|..+|++..|+.+   +.+.+.. +....  +......+..+.+.+.+.+.++|
T Consensus       146 l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~--~~~v~~~~~~~l~~~~~~l~~~D  222 (312)
T 3t4e_A          146 MRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENT--DCVVTVTDLADQHAFTEALASAD  222 (312)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHS--SCEEEEEETTCHHHHHHHHHHCS
T ss_pred             cCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhcc--CcceEEechHhhhhhHhhccCce
Confidence            45789999997 899999999999999878999999833   3333221 10000  12223345555444566778899


Q ss_pred             EEEEeccCC
Q 021819           83 GVFHVASPC   91 (307)
Q Consensus        83 ~vi~~a~~~   91 (307)
                      +|||+.+..
T Consensus       223 iIINaTp~G  231 (312)
T 3t4e_A          223 ILTNGTKVG  231 (312)
T ss_dssp             EEEECSSTT
T ss_pred             EEEECCcCC
Confidence            999997653

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.61  E-value=9.8e-05  Score=64.18  Aligned_cols=99  Identities=12%  Similarity=0.144  Sum_probs=59.0

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      +++|.|.||+|++|+.+++.|.+....+++++.++.+....+......-. +..  ..|+.-.+  .+.++++|+||-|.
T Consensus        16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~-~~v--~~dl~~~~--~~~~~~vDvVf~at   90 (359)
T 1xyg_A           16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLR-AQK--LPTLVSVK--DADFSTVDAVFCCL   90 (359)
T ss_dssp             CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGT-TSC--CCCCBCGG--GCCGGGCSEEEECC
T ss_pred             CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhc-Ccc--cccceecc--hhHhcCCCEEEEcC
Confidence            36899999999999999999998764477777654322222211000000 100  12332222  33456899999997


Q ss_pred             cCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCc
Q 021819           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (307)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~  132 (307)
                      +...                  +...+..+ +.|. ++|-.|+.
T Consensus        91 p~~~------------------s~~~a~~~-~aG~-~VId~sa~  114 (359)
T 1xyg_A           91 PHGT------------------TQEIIKEL-PTAL-KIVDLSAD  114 (359)
T ss_dssp             CTTT------------------HHHHHHTS-CTTC-EEEECSST
T ss_pred             Cchh------------------HHHHHHHH-hCCC-EEEECCcc
Confidence            6522                  34455666 6675 58887864

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.59  E-value=5.5e-05  Score=65.23  Aligned_cols=75  Identities=13%  Similarity=0.080  Sum_probs=54.3

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChh---HHHHHhc--Ccc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AVSRAVE--GCK   82 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~---~~~~~~~--~~d   82 (307)
                      .+++|+|+||+|.||...++.+...|. +|+++++++.+.+.++.+      +...+ .|..+.+   .+.+...  ++|
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~------ga~~~-~~~~~~~~~~~~~~~~~~~g~D  219 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKEY------GAEYL-INASKEDILRQVLKFTNGKGVD  219 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT------TCSEE-EETTTSCHHHHHHHHTTTSCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc------CCcEE-EeCCCchHHHHHHHHhCCCCce
Confidence            468999999999999999999999999 899999977666655554      22211 3444433   3333332  689


Q ss_pred             EEEEeccC
Q 021819           83 GVFHVASP   90 (307)
Q Consensus        83 ~vi~~a~~   90 (307)
                      +||+++|.
T Consensus       220 ~vid~~g~  227 (334)
T 3qwb_A          220 ASFDSVGK  227 (334)
T ss_dssp             EEEECCGG
T ss_pred             EEEECCCh
Confidence            99999875

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.59  E-value=7.9e-05  Score=64.44  Aligned_cols=75  Identities=13%  Similarity=0.157  Sum_probs=55.0

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhH---HHHHhc--Ccc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA---VSRAVE--GCK   82 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~---~~~~~~--~~d   82 (307)
                      .+++|+|+||+|.||...++.+...|+ +|+++++++.+.+.++++      +...+ .|..+.+.   +.+...  ++|
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~l------ga~~~-~~~~~~~~~~~~~~~~~~~g~D  215 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRL------GAAYV-IDTSTAPLYETVMELTNGIGAD  215 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHH------TCSEE-EETTTSCHHHHHHHHTTTSCEE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhC------CCcEE-EeCCcccHHHHHHHHhCCCCCc
Confidence            468999999999999999999988999 999999988777666654      22221 24444332   333332  689


Q ss_pred             EEEEeccC
Q 021819           83 GVFHVASP   90 (307)
Q Consensus        83 ~vi~~a~~   90 (307)
                      +||+++|.
T Consensus       216 vvid~~g~  223 (340)
T 3gms_A          216 AAIDSIGG  223 (340)
T ss_dssp             EEEESSCH
T ss_pred             EEEECCCC
Confidence            99999875

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.57  E-value=3.9e-05  Score=65.91  Aligned_cols=75  Identities=17%  Similarity=0.135  Sum_probs=54.2

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhH---HHHHhc--Ccc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA---VSRAVE--GCK   82 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~---~~~~~~--~~d   82 (307)
                      .+++|+|+||+|.||...++.+...|. +|+++++++.+.+.++.+      +...+ .|..+.+.   +.+...  ++|
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~------Ga~~~-~~~~~~~~~~~~~~~~~~~g~D  211 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKAL------GAWET-IDYSHEDVAKRVLELTDGKKCP  211 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHH------TCSEE-EETTTSCHHHHHHHHTTTCCEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc------CCCEE-EeCCCccHHHHHHHHhCCCCce
Confidence            468999999999999999999999999 999999877666655544      22111 34444333   333332  689


Q ss_pred             EEEEeccC
Q 021819           83 GVFHVASP   90 (307)
Q Consensus        83 ~vi~~a~~   90 (307)
                      +||+++|.
T Consensus       212 vvid~~g~  219 (325)
T 3jyn_A          212 VVYDGVGQ  219 (325)
T ss_dssp             EEEESSCG
T ss_pred             EEEECCCh
Confidence            99999875

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.57  E-value=0.0002  Score=60.56  Aligned_cols=86  Identities=17%  Similarity=0.156  Sum_probs=56.7

Q ss_pred             cCCcE-EEEeCC-c-----------------hhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCC-----------CC
Q 021819            7 KEEET-VCVTGA-N-----------------GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP-----------GA   56 (307)
Q Consensus         7 ~~~~~-ilItGa-t-----------------G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~-----------~~   56 (307)
                      +.+++ |+||+| |                 |-.|.+++++++++|+ .|+.+.+..+.......++           ..
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga-~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~  112 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGY-GVLFLYRARSAFPYAHRFPPQTWLSALRPSGP  112 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTC-EEEEEEETTSCCTTGGGSCHHHHHHHCEECCC
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCC-EEEEEecCCCcCcchhccCccchhhhhccccc
Confidence            34666 999866 6                 8899999999999999 8998887543221110010           00


Q ss_pred             CCCceEEEEcccCChhHHHHHh-------------------------------------cCccEEEEeccCCCC
Q 021819           57 GDANLRVFEADVLDSGAVSRAV-------------------------------------EGCKGVFHVASPCTL   93 (307)
Q Consensus        57 ~~~~~~~i~~D~~d~~~~~~~~-------------------------------------~~~d~vi~~a~~~~~   93 (307)
                      .+.++..+..|+...+++.+++                                     .+.|++|++|++++.
T Consensus       113 ~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsDf  186 (313)
T 1p9o_A          113 ALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSDF  186 (313)
T ss_dssp             -CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCSE
T ss_pred             cccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhhc
Confidence            1114556777776655444433                                     468999999999765

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.57  E-value=7.2e-05  Score=63.33  Aligned_cols=78  Identities=12%  Similarity=0.045  Sum_probs=55.7

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      .++++++|+|+ |.+|+.++..|.+.|..+|++..|+.++.+.+......   ...    ++.+.+++.+.+.++|+||+
T Consensus       139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~---~~~----~~~~~~~~~~~~~~aDivIn  210 (297)
T 2egg_A          139 LDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDE---RRS----AYFSLAEAETRLAEYDIIIN  210 (297)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCS---SSC----CEECHHHHHHTGGGCSEEEE
T ss_pred             CCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhh---ccC----ceeeHHHHHhhhccCCEEEE
Confidence            45789999997 78999999999999977899999986655444322110   000    22233567777889999999


Q ss_pred             eccCCC
Q 021819           87 VASPCT   92 (307)
Q Consensus        87 ~a~~~~   92 (307)
                      +.+...
T Consensus       211 ~t~~~~  216 (297)
T 2egg_A          211 TTSVGM  216 (297)
T ss_dssp             CSCTTC
T ss_pred             CCCCCC
Confidence            987643

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.57  E-value=2.1e-05  Score=66.09  Aligned_cols=80  Identities=15%  Similarity=0.224  Sum_probs=54.7

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      .++++++|+|+ |++|+.++..|.+.|..+|+...|+.++.+.+..........+.....+   .+++.+.+.++|+|||
T Consensus       125 l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~---~~~l~~~l~~~DiVIn  200 (283)
T 3jyo_A          125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVD---ARGIEDVIAAADGVVN  200 (283)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEEC---STTHHHHHHHSSEEEE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcC---HHHHHHHHhcCCEEEE
Confidence            45789999997 8999999999999998679999998766554422110000012222223   2456677788999999


Q ss_pred             eccC
Q 021819           87 VASP   90 (307)
Q Consensus        87 ~a~~   90 (307)
                      +.+.
T Consensus       201 aTp~  204 (283)
T 3jyo_A          201 ATPM  204 (283)
T ss_dssp             CSST
T ss_pred             CCCC
Confidence            9764

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.56  E-value=4.5e-05  Score=68.72  Aligned_cols=72  Identities=21%  Similarity=0.264  Sum_probs=59.3

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHH-hcCccEEEEe
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHV   87 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~d~vi~~   87 (307)
                      .|+|+|.|+ |-+|++|++.|.++|+ +|+++++++...+.+....     ++..+.||.++++.++++ ++++|.+|-+
T Consensus         3 ~M~iiI~G~-G~vG~~la~~L~~~~~-~v~vId~d~~~~~~~~~~~-----~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~   75 (461)
T 4g65_A            3 AMKIIILGA-GQVGGTLAENLVGENN-DITIVDKDGDRLRELQDKY-----DLRVVNGHASHPDVLHEAGAQDADMLVAV   75 (461)
T ss_dssp             CEEEEEECC-SHHHHHHHHHTCSTTE-EEEEEESCHHHHHHHHHHS-----SCEEEESCTTCHHHHHHHTTTTCSEEEEC
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHhc-----CcEEEEEcCCCHHHHHhcCCCcCCEEEEE
Confidence            358999996 9999999999999999 9999998876665544211     678999999999999887 6789998754

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.56  E-value=0.00051  Score=58.35  Aligned_cols=114  Identities=15%  Similarity=0.073  Sum_probs=74.1

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHC-CC-CeEEEEeCCCCCCcc-cccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDN-NY-TSINATVFPGSDSSH-LFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~-g~-~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      |||.|+||+|.+|..++..|..+ +. .++..+++.+ ...- ...+..... ....... .++  ...+.++++|+||-
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~-~~~v~~~-~~~--~~~~~~~~aDivii   75 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPT-AVKIKGF-SGE--DATPALEGADVVLI   75 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCS-SEEEEEE-CSS--CCHHHHTTCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCC-CceEEEe-cCC--CcHHHhCCCCEEEE
Confidence            48999999999999999999876 53 4788888865 2211 111111000 2222111 111  12356789999999


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCC-cEEEEec
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV-RRVVVTS  130 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~iS  130 (307)
                      +||.....  -....+.++.|....+.+.+.+.+++- ..++.+|
T Consensus        76 ~ag~~rkp--G~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt  118 (312)
T 3hhp_A           76 SAGVARKP--GMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (312)
T ss_dssp             CCSCSCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             eCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec
Confidence            99875432  234678999999999999999988753 3455554

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.55  E-value=3.7e-05  Score=65.52  Aligned_cols=113  Identities=14%  Similarity=0.118  Sum_probs=70.1

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCC---CCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGA---GDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~---~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      +||.|+|+ |.+|+.++..|+..|..+|.++++++.+.+... .+...   .....++..  .+|   . +.++++|+||
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~--t~d---~-~a~~~aD~Vi   75 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG--TNN---Y-ADTANSDVIV   75 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE--ESC---G-GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEE--CCC---H-HHHCCCCEEE
Confidence            58999998 999999999999998635888888654332211 11000   000111111  023   2 3478999999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      .++|......  .........|......+.+.+.+.+...++.+.|
T Consensus        76 ~a~g~p~~~g--~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  119 (309)
T 1ur5_A           76 VTSGAPRKPG--MSREDLIKVNADITRACISQAAPLSPNAVIIMVN  119 (309)
T ss_dssp             ECCCC----------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred             EcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence            9998754321  1224567888888899999998886555555555

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.54  E-value=0.00016  Score=61.95  Aligned_cols=120  Identities=13%  Similarity=0.165  Sum_probs=73.7

Q ss_pred             CccccccCCcEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCccc-ccCCCC--CCCceEEEEcccCChhHHHH
Q 021819            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHL-FALPGA--GDANLRVFEADVLDSGAVSR   76 (307)
Q Consensus         1 m~~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~-~~~~~~--~~~~~~~i~~D~~d~~~~~~   76 (307)
                      |.+.+..+.+||.|+|| |.+|..++..|+.++. .+|..++++..+.+.. ..+...  ....+++.. |  +    .+
T Consensus         1 ~~~~~~~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~----~~   72 (326)
T 2zqz_A            1 MASITDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--E----YS   72 (326)
T ss_dssp             -----CCCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GG
T ss_pred             CCccccCCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--C----HH
Confidence            55666666679999998 9999999999988774 4788888864333211 101000  000233322 2  2    23


Q ss_pred             HhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCC-cEEEEec
Q 021819           77 AVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV-RRVVVTS  130 (307)
Q Consensus        77 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~iS  130 (307)
                      .++++|+||..++......  ......+..|......+.+.+.+++- ..++.+|
T Consensus        73 a~~~aDvVii~ag~~~k~g--~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  125 (326)
T 2zqz_A           73 DAKDADLVVITAGAPQKPG--ETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             GGGGCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             HhCCCCEEEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence            4789999999998754322  23456788999999999999988753 3555554

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.54  E-value=7.7e-05  Score=64.39  Aligned_cols=69  Identities=12%  Similarity=0.074  Sum_probs=57.4

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHH-hcCccEEEEec
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHVA   88 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~d~vi~~a   88 (307)
                      ++++|.|+ |.+|+.+++.|.++|+  |++++++++..+ +...      ++.++.+|.+|++.++++ ++++|.|+-+.
T Consensus       116 ~~viI~G~-G~~g~~l~~~L~~~g~--v~vid~~~~~~~-~~~~------~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~  185 (336)
T 1lnq_A          116 RHVVICGW-SESTLECLRELRGSEV--FVLAEDENVRKK-VLRS------GANFVHGDPTRVSDLEKANVRGARAVIVDL  185 (336)
T ss_dssp             CEEEEESC-CHHHHHHHTTGGGSCE--EEEESCGGGHHH-HHHT------TCEEEESCTTSHHHHHHTCSTTEEEEEECC
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCc--EEEEeCChhhhh-HHhC------CcEEEEeCCCCHHHHHhcChhhccEEEEcC
Confidence            48999996 9999999999999887  777887766555 4332      788999999999999887 78999998864

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.54  E-value=0.0001  Score=63.05  Aligned_cols=113  Identities=16%  Similarity=0.158  Sum_probs=72.2

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCccc-ccC---CCCCCCceEEEEcccCChhHHHHHhcCc
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHL-FAL---PGAGDANLRVFEADVLDSGAVSRAVEGC   81 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~-~~~---~~~~~~~~~~i~~D~~d~~~~~~~~~~~   81 (307)
                      ++++||.|+|+ |.+|..++..|+.+|. .+|+++++++...+.. ..+   .......+++.. |  +.    +.++++
T Consensus         4 ~~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~~----~al~~a   75 (316)
T 1ldn_A            4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--DY----DDCRDA   75 (316)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--CG----GGTTTC
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--cH----HHhCCC
Confidence            34679999998 9999999999988773 5799999875432211 000   000000222222 1  22    357899


Q ss_pred             cEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEe
Q 021819           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVT  129 (307)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~i  129 (307)
                      |+||.+++.......  ...+.+..|......+.+.+.+..-. .++.+
T Consensus        76 DvViia~~~~~~~g~--~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~  122 (316)
T 1ldn_A           76 DLVVICAGANQKPGE--TRLDLVDKNIAIFRSIVESVMASGFQGLFLVA  122 (316)
T ss_dssp             SEEEECCSCCCCTTT--CSGGGHHHHHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred             CEEEEcCCCCCCCCC--CHHHHHHcChHHHHHHHHHHHHHCCCCEEEEe
Confidence            999999987654322  23456778888888888888887533 34443

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.53  E-value=6.5e-05  Score=65.16  Aligned_cols=75  Identities=16%  Similarity=0.148  Sum_probs=54.1

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHC-CCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhH---HHHHh--cCc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA---VSRAV--EGC   81 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~---~~~~~--~~~   81 (307)
                      .+++|+|+||+|.||..+++.+... |+ +|+++++++.+.+.++.+      +...+ .|..+.+.   +.++.  .++
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~------g~~~~-~~~~~~~~~~~~~~~~~~~~~  241 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRA------GADYV-INASMQDPLAEIRRITESKGV  241 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHH------TCSEE-EETTTSCHHHHHHHHTTTSCE
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHh------CCCEE-ecCCCccHHHHHHHHhcCCCc
Confidence            4679999999999999999999998 99 899999876665555443      21111 35544433   44444  368


Q ss_pred             cEEEEeccC
Q 021819           82 KGVFHVASP   90 (307)
Q Consensus        82 d~vi~~a~~   90 (307)
                      |+||+++|.
T Consensus       242 d~vi~~~g~  250 (347)
T 1jvb_A          242 DAVIDLNNS  250 (347)
T ss_dssp             EEEEESCCC
T ss_pred             eEEEECCCC
Confidence            999999875

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.51  E-value=0.00047  Score=59.44  Aligned_cols=94  Identities=22%  Similarity=0.197  Sum_probs=56.0

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCC--CeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNY--TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      ++|+|.||+|.+|+.|++.|.++++  .+++.+.........+. +.     +......|. +++    .++++|+||-+
T Consensus         7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~-~~-----g~~i~~~~~-~~~----~~~~~DvV~~a   75 (340)
T 2hjs_A            7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG-FA-----ESSLRVGDV-DSF----DFSSVGLAFFA   75 (340)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE-ET-----TEEEECEEG-GGC----CGGGCSEEEEC
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccc-cC-----CcceEEecC-CHH----HhcCCCEEEEc
Confidence            5899999999999999999997654  24555542211111111 10     111111122 222    24689999998


Q ss_pred             ccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcc
Q 021819           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS  133 (307)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~  133 (307)
                      .+..                  .+..+++.+.+.|.+ +|.+|+..
T Consensus        76 ~g~~------------------~s~~~a~~~~~aG~k-vId~Sa~~  102 (340)
T 2hjs_A           76 AAAE------------------VSRAHAERARAAGCS-VIDLSGAL  102 (340)
T ss_dssp             SCHH------------------HHHHHHHHHHHTTCE-EEETTCTT
T ss_pred             CCcH------------------HHHHHHHHHHHCCCE-EEEeCCCC
Confidence            6531                  245667777788864 77778643

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.49  E-value=9.1e-05  Score=64.65  Aligned_cols=97  Identities=19%  Similarity=0.146  Sum_probs=64.4

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChh---HHHHHh-cCccE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AVSRAV-EGCKG   83 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~---~~~~~~-~~~d~   83 (307)
                      .+++|+|+||+|.||..+++.+...|+ +|+++++++.+.+.++.+      +...+ .|..+.+   .+.+.. .++|+
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~------Ga~~~-~~~~~~~~~~~~~~~~~~g~D~  234 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSL------GCDRP-INYKTEPVGTVLKQEYPEGVDV  234 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT------TCSEE-EETTTSCHHHHHHHHCTTCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHc------CCcEE-EecCChhHHHHHHHhcCCCCCE
Confidence            467999999999999999999999999 899999876665555544      22221 2433322   222222 26899


Q ss_pred             EEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCc
Q 021819           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (307)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~  132 (307)
                      ||+++|..                  .....++.++..  +++|.+++.
T Consensus       235 vid~~g~~------------------~~~~~~~~l~~~--G~iv~~g~~  263 (362)
T 2c0c_A          235 VYESVGGA------------------MFDLAVDALATK--GRLIVIGFI  263 (362)
T ss_dssp             EEECSCTH------------------HHHHHHHHEEEE--EEEEECCCG
T ss_pred             EEECCCHH------------------HHHHHHHHHhcC--CEEEEEeCC
Confidence            99998730                  122344455444  489988863

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=97.49  E-value=8.1e-05  Score=56.77  Aligned_cols=71  Identities=14%  Similarity=0.127  Sum_probs=48.7

Q ss_pred             chhhHHHHHHHHHHCCCCeEEEEeCCCCCCcc----cccCCCCCCCceEEEEcccCCh--hHHHHHhc------CccEEE
Q 021819           18 NGFIGTWLVKTLLDNNYTSINATVFPGSDSSH----LFALPGAGDANLRVFEADVLDS--GAVSRAVE------GCKGVF   85 (307)
Q Consensus        18 tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~i~~D~~d~--~~~~~~~~------~~d~vi   85 (307)
                      +|.++.+.++.|.+.|. +|++..|+......    .......+. ++..+++|++++  +++.++++      +-|++|
T Consensus        25 s~~p~~a~a~~La~~Ga-~vvi~~r~~~e~~~~~~~~~~~~~~G~-~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLV  102 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGV-DVVINLMPDSSKDAHPDEGKLVTQAGM-DYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLV  102 (157)
T ss_dssp             EBCCCHHHHHHHHHTTC-CEEEECSCTTSTTSCTTHHHHHHHTTC-EEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEE
T ss_pred             cCCCCHHHHHHHHHcCC-CEEEECCCcccccccccHHHHHHHcCC-eEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEE
Confidence            56899999999999999 67666665433221    111111111 567788999998  88877664      229999


Q ss_pred             EeccC
Q 021819           86 HVASP   90 (307)
Q Consensus        86 ~~a~~   90 (307)
                      ||||.
T Consensus       103 nnAgg  107 (157)
T 3gxh_A          103 HCLAN  107 (157)
T ss_dssp             ECSBS
T ss_pred             ECCCC
Confidence            99986

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.48  E-value=0.00031  Score=59.77  Aligned_cols=114  Identities=14%  Similarity=0.140  Sum_probs=74.0

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC--CCCcccc-cCCCC---CCCceEEEEcccCChhHHHHHhcCc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG--SDSSHLF-ALPGA---GDANLRVFEADVLDSGAVSRAVEGC   81 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~--~~~~~~~-~~~~~---~~~~~~~i~~D~~d~~~~~~~~~~~   81 (307)
                      ++++|.|+|+ |.+|+.++..|+..|..+|+.+++++  ...+... .+...   .....++...  +|+    +.++++
T Consensus         7 ~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t--~d~----~a~~~a   79 (315)
T 3tl2_A            7 KRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT--SDY----ADTADS   79 (315)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE--SCG----GGGTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc--CCH----HHhCCC
Confidence            3569999996 99999999999998875788888863  2221110 00000   0001111111  122    357899


Q ss_pred             cEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEec
Q 021819           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTS  130 (307)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~iS  130 (307)
                      |+||.++|......  ....+.++.|......+.+.+.+++-. .++.+|
T Consensus        80 DvVIiaag~p~kpg--~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvs  127 (315)
T 3tl2_A           80 DVVVITAGIARKPG--MSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLT  127 (315)
T ss_dssp             SEEEECCSCCCCTT--CCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CEEEEeCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECC
Confidence            99999998754322  345688899999999999999887533 455555

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.45  E-value=0.00019  Score=62.05  Aligned_cols=76  Identities=24%  Similarity=0.172  Sum_probs=53.7

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCCh-hHHHHHhc--CccEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS-GAVSRAVE--GCKGV   84 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~-~~~~~~~~--~~d~v   84 (307)
                      .+++|+|+||+|.||...++.+...|. +|+++++++.+.+.++.+..    . ..+..+ .+. +.+.+...  ++|+|
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga----~-~v~~~~-~~~~~~v~~~~~~~g~Dvv  231 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGA----D-IVLPLE-EGWAKAVREATGGAGVDMV  231 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTC----S-EEEESS-TTHHHHHHHHTTTSCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCC----c-EEecCc-hhHHHHHHHHhCCCCceEE
Confidence            467999999999999999999999999 99999998777666655421    1 122222 221 23333333  58999


Q ss_pred             EEeccC
Q 021819           85 FHVASP   90 (307)
Q Consensus        85 i~~a~~   90 (307)
                      |+++|.
T Consensus       232 id~~g~  237 (342)
T 4eye_A          232 VDPIGG  237 (342)
T ss_dssp             EESCC-
T ss_pred             EECCch
Confidence            999885

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.45  E-value=0.00031  Score=58.40  Aligned_cols=71  Identities=15%  Similarity=0.232  Sum_probs=44.7

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHC-CCCeEEE-EeCCCCCC--cccccCCCCCCCceEEEEcccCChhHHHHHhcCccEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDN-NYTSINA-TVFPGSDS--SHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~-g~~~V~~-~~r~~~~~--~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~v   84 (307)
                      |+||.|+|++|.+|+.+++.+.+. +. ++++ ++|+.+..  ..+..+.     +..   .++.-.+++.++++++|+|
T Consensus         7 mikV~V~Ga~G~MG~~i~~~l~~~~~~-eLv~~~d~~~~~~~G~d~gel~-----g~~---~gv~v~~dl~~ll~~~DVV   77 (272)
T 4f3y_A            7 SMKIAIAGASGRMGRMLIEAVLAAPDA-TLVGALDRTGSPQLGQDAGAFL-----GKQ---TGVALTDDIERVCAEADYL   77 (272)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHHCTTE-EEEEEBCCTTCTTTTSBTTTTT-----TCC---CSCBCBCCHHHHHHHCSEE
T ss_pred             ccEEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEEecCcccccccHHHHh-----CCC---CCceecCCHHHHhcCCCEE
Confidence            579999999999999999999877 45 7766 45543321  1111111     110   0222223455666789999


Q ss_pred             EEec
Q 021819           85 FHVA   88 (307)
Q Consensus        85 i~~a   88 (307)
                      |.++
T Consensus        78 IDfT   81 (272)
T 4f3y_A           78 IDFT   81 (272)
T ss_dssp             EECS
T ss_pred             EEcC
Confidence            9985

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.45  E-value=0.00032  Score=57.78  Aligned_cols=103  Identities=13%  Similarity=0.065  Sum_probs=66.3

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCC-------------------CC--CCCceEEEEc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP-------------------GA--GDANLRVFEA   66 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~-------------------~~--~~~~~~~i~~   66 (307)
                      +.++|+|.|+ |.+|+.+++.|...|..+|+.++++.-...++.+..                   ..  ....+..+..
T Consensus        30 ~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~  108 (249)
T 1jw9_B           30 KDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA  108 (249)
T ss_dssp             HHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred             hCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEec
Confidence            4579999995 899999999999999878998888652222221110                   00  0013455555


Q ss_pred             ccCChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEec
Q 021819           67 DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (307)
Q Consensus        67 D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iS  130 (307)
                      +++ .+.+.++++++|+||.+...                 ...-..+.+.|.+.++. +|+.+
T Consensus       109 ~~~-~~~~~~~~~~~DvVi~~~d~-----------------~~~~~~l~~~~~~~~~p-~i~~~  153 (249)
T 1jw9_B          109 LLD-DAELAALIAEHDLVLDCTDN-----------------VAVRNQLNAGCFAAKVP-LVSGA  153 (249)
T ss_dssp             CCC-HHHHHHHHHTSSEEEECCSS-----------------HHHHHHHHHHHHHHTCC-EEEEE
T ss_pred             cCC-HhHHHHHHhCCCEEEEeCCC-----------------HHHHHHHHHHHHHcCCC-EEEee
Confidence            564 35567788999999998421                 11234566777777754 66654

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.44  E-value=0.00034  Score=58.82  Aligned_cols=113  Identities=12%  Similarity=0.030  Sum_probs=74.5

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcc----cccCCCCCCCceEEEEcccCChhHHHHHhcCccEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~v   84 (307)
                      |||.|+|+ |+||+.++-.|..++. .++..++.++...+-    +..-.............  .|++    .++++|+|
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~--~d~~----~~~~aDvV   73 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS----LLKGSEII   73 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE--SCGG----GGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecC--CCHH----HhCCCCEE
Confidence            48999995 9999999999988874 689998886533211    11000000001222221  1333    47899999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      |-.||......  ....+.++.|..-.+.+.+.+.+++-..++.+-|
T Consensus        74 vitAG~prkpG--mtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvs  118 (294)
T 2x0j_A           74 VVTAGLARKPG--MTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             EECCCCCCCSS--SCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EEecCCCCCCC--CchHHHHHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence            99999765432  3567899999999999999999886544444443

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.43  E-value=0.00011  Score=64.51  Aligned_cols=77  Identities=16%  Similarity=0.023  Sum_probs=57.2

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      ...+++|+|+|+ |.||+.+++.+...|. +|++.+|++...+.+......   .+   ..+..+.+++.+++.++|+||
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~---~~---~~~~~~~~~l~~~l~~aDvVi  236 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCG---RI---HTRYSSAYELEGAVKRADLVI  236 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTT---SS---EEEECCHHHHHHHHHHCSEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCC---ee---EeccCCHHHHHHHHcCCCEEE
Confidence            356789999998 9999999999999999 999999976654444331110   11   123345667888888999999


Q ss_pred             EeccC
Q 021819           86 HVASP   90 (307)
Q Consensus        86 ~~a~~   90 (307)
                      ++++.
T Consensus       237 ~~~~~  241 (377)
T 2vhw_A          237 GAVLV  241 (377)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            98875

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.43  E-value=1.6e-05  Score=59.80  Aligned_cols=72  Identities=6%  Similarity=0.049  Sum_probs=51.5

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      .+++|+|+|+ |.+|+.+++.|.+.|+ +|++.+|++...+.+....     +....     ..+++.+.++++|+||.+
T Consensus        20 ~~~~v~iiG~-G~iG~~~a~~l~~~g~-~v~v~~r~~~~~~~~a~~~-----~~~~~-----~~~~~~~~~~~~Divi~a   87 (144)
T 3oj0_A           20 GGNKILLVGN-GMLASEIAPYFSYPQY-KVTVAGRNIDHVRAFAEKY-----EYEYV-----LINDIDSLIKNNDVIITA   87 (144)
T ss_dssp             CCCEEEEECC-SHHHHHHGGGCCTTTC-EEEEEESCHHHHHHHHHHH-----TCEEE-----ECSCHHHHHHTCSEEEEC
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEcCCHHHHHHHHHHh-----CCceE-----eecCHHHHhcCCCEEEEe
Confidence            3679999995 9999999999999999 6999999766554432211     22221     223455677899999999


Q ss_pred             ccCC
Q 021819           88 ASPC   91 (307)
Q Consensus        88 a~~~   91 (307)
                      .+..
T Consensus        88 t~~~   91 (144)
T 3oj0_A           88 TSSK   91 (144)
T ss_dssp             SCCS
T ss_pred             CCCC
Confidence            7653

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.42  E-value=0.00014  Score=58.53  Aligned_cols=67  Identities=18%  Similarity=0.199  Sum_probs=48.4

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      .+++|.|+| +|.+|+.+++.|.+.|+ +|++.+|+++..+.+...      ++...        +..++++++|+||.+
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~------g~~~~--------~~~~~~~~~DvVi~a   90 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGSGF-KVVVGSRNPKRTARLFPS------AAQVT--------FQEEAVSSPEVIFVA   90 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHTTC-CEEEEESSHHHHHHHSBT------TSEEE--------EHHHHTTSCSEEEEC
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc------CCcee--------cHHHHHhCCCEEEEC
Confidence            356899999 89999999999999999 899999876544333221      33321        245667899999998


Q ss_pred             ccC
Q 021819           88 ASP   90 (307)
Q Consensus        88 a~~   90 (307)
                      ...
T Consensus        91 v~~   93 (215)
T 2vns_A           91 VFR   93 (215)
T ss_dssp             SCG
T ss_pred             CCh
Confidence            653

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=97.42  E-value=0.00043  Score=61.70  Aligned_cols=95  Identities=9%  Similarity=0.128  Sum_probs=62.9

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCC-C--CeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCC--hhH-HHHHhcCccE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNN-Y--TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD--SGA-VSRAVEGCKG   83 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g-~--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d--~~~-~~~~~~~~d~   83 (307)
                      ++|+|.| .|.||+.+++.|.++. .  ..|+..+......+..+..      ++++...++++  .++ +.+++++.|+
T Consensus        14 ~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~------g~~~~~~~Vdadnv~~~l~aLl~~~Dv   86 (480)
T 2ph5_A           14 NRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQY------GVSFKLQQITPQNYLEVIGSTLEENDF   86 (480)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHH------TCEEEECCCCTTTHHHHTGGGCCTTCE
T ss_pred             CCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhc------CCceeEEeccchhHHHHHHHHhcCCCE
Confidence            5899999 7999999999999874 3  2677777654443322222      34556556544  333 5557776799


Q ss_pred             EEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCc
Q 021819           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (307)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~  132 (307)
                      |||++-..                  ....++++|.+.|+.   |++++
T Consensus        87 VIN~s~~~------------------~~l~Im~acleaGv~---YlDTa  114 (480)
T 2ph5_A           87 LIDVSIGI------------------SSLALIILCNQKGAL---YINAA  114 (480)
T ss_dssp             EEECCSSS------------------CHHHHHHHHHHHTCE---EEESS
T ss_pred             EEECCccc------------------cCHHHHHHHHHcCCC---EEECC
Confidence            99865331                  145789999999853   55653

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.41  E-value=0.00011  Score=64.30  Aligned_cols=71  Identities=10%  Similarity=0.098  Sum_probs=51.8

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC---CCCcccccCCCCCCCceEEEEcccCC--hhHHHHHhcCccE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG---SDSSHLFALPGAGDANLRVFEADVLD--SGAVSRAVEGCKG   83 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~i~~D~~d--~~~~~~~~~~~d~   83 (307)
                      +++|+|+|+ |.||..+++.+...|. +|+++++++   .+.+.++.+      ++..+  | .+  .+.+.+.-.++|+
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~------ga~~v--~-~~~~~~~~~~~~~~~d~  249 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEET------KTNYY--N-SSNGYDKLKDSVGKFDV  249 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHH------TCEEE--E-CTTCSHHHHHHHCCEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHh------CCcee--c-hHHHHHHHHHhCCCCCE
Confidence            789999999 9999999999999999 999999987   554444443      34444  5 43  1223321147999


Q ss_pred             EEEeccC
Q 021819           84 VFHVASP   90 (307)
Q Consensus        84 vi~~a~~   90 (307)
                      ||+++|.
T Consensus       250 vid~~g~  256 (366)
T 2cdc_A          250 IIDATGA  256 (366)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999875

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.40  E-value=8.7e-05  Score=62.50  Aligned_cols=66  Identities=17%  Similarity=0.259  Sum_probs=48.5

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      ||+|.|.|+||.+|+.+++.|.+.|+ +|++.+|+++..+.+...      ++     +.++   ..++++++|+||.+.
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~------g~-----~~~~---~~~~~~~aDvVi~av   75 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDSAH-HLAAIEIAPEGRDRLQGM------GI-----PLTD---GDGWIDEADVVVLAL   75 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHSSS-EEEEECCSHHHHHHHHHT------TC-----CCCC---SSGGGGTCSEEEECS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHhc------CC-----CcCC---HHHHhcCCCEEEEcC
Confidence            46999999999999999999999999 999998876554444331      21     1222   224567899999885


Q ss_pred             c
Q 021819           89 S   89 (307)
Q Consensus        89 ~   89 (307)
                      .
T Consensus        76 ~   76 (286)
T 3c24_A           76 P   76 (286)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.39  E-value=0.00015  Score=62.96  Aligned_cols=97  Identities=12%  Similarity=0.092  Sum_probs=63.1

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChh---HHHHHhc--Ccc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AVSRAVE--GCK   82 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~---~~~~~~~--~~d   82 (307)
                      .+.+|+|+|+ |.+|...++.+...|+.+|+++++++.+.+.++.+      ++..+ .|..+.+   .+.++..  ++|
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~------Ga~~~-~~~~~~~~~~~v~~~~~g~g~D  238 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV------GADYV-INPFEEDVVKEVMDITDGNGVD  238 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH------TCSEE-ECTTTSCHHHHHHHHTTTSCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh------CCCEE-ECCCCcCHHHHHHHHcCCCCCC
Confidence            4678999999 99999999999999986799998876655555443      22221 3444432   2333322  689


Q ss_pred             EEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      +||+++|..                 ......++.++..  ++++.+++
T Consensus       239 ~vid~~g~~-----------------~~~~~~~~~l~~~--G~iv~~g~  268 (348)
T 2d8a_A          239 VFLEFSGAP-----------------KALEQGLQAVTPA--GRVSLLGL  268 (348)
T ss_dssp             EEEECSCCH-----------------HHHHHHHHHEEEE--EEEEECCC
T ss_pred             EEEECCCCH-----------------HHHHHHHHHHhcC--CEEEEEcc
Confidence            999998741                 0123344444443  47888876

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.39  E-value=0.00064  Score=58.06  Aligned_cols=113  Identities=11%  Similarity=0.114  Sum_probs=72.4

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcc----cccCCCCCCCceEEEEcccCChhHHHHHhcCccE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~   83 (307)
                      ++||.|+|+ |.+|..++..|+.+|. .+|..+++++.+.+.    +..........+++. .|  +    .+.++++|+
T Consensus         6 ~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~--~----~~a~~~aDv   77 (317)
T 3d0o_A            6 GNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG--E----YSDCHDADL   77 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC--C----GGGGTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC--C----HHHhCCCCE
Confidence            459999998 9999999999998874 478888876432221    000000000022322 22  2    344789999


Q ss_pred             EEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      ||.+++......  ......+..|......+.+.+.+.+-..++.+.|
T Consensus        78 Vvi~ag~~~~~g--~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (317)
T 3d0o_A           78 VVICAGAAQKPG--ETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT  123 (317)
T ss_dssp             EEECCCCCCCTT--CCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEECCCCCCCCC--CcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence            999998754322  2345677889999999999998885433334344

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.36  E-value=0.00019  Score=61.73  Aligned_cols=171  Identities=19%  Similarity=0.099  Sum_probs=96.3

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCC------CeEEEEeCCCCCC--c----ccccCCCCCCCceEEEEcccCChhHHHH
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNY------TSINATVFPGSDS--S----HLFALPGAGDANLRVFEADVLDSGAVSR   76 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~------~~V~~~~r~~~~~--~----~~~~~~~~~~~~~~~i~~D~~d~~~~~~   76 (307)
                      ..||.|+||+|.||+.|+-.|.....      .++..++..+...  +    .+....  ..-....+..+  |   ..+
T Consensus        24 ~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~--~~~~~~~~~~~--~---~~~   96 (345)
T 4h7p_A           24 AVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCA--FPLLDKVVVTA--D---PRV   96 (345)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTT--CTTEEEEEEES--C---HHH
T ss_pred             CCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcC--ccCCCcEEEcC--C---hHH
Confidence            35999999999999999998887642      2577777643211  1    111110  00011222111  2   346


Q ss_pred             HhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcC-Cc-EEEEecCcceeccCCCCCCccccc-C-CCC
Q 021819           77 AVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG-VR-RVVVTSSISAIVPNPGWKGKVFDE-T-SWT  152 (307)
Q Consensus        77 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~v~iSS~~~~~~~~~~~~~~~~E-~-~~~  152 (307)
                      .++++|+||-+||......  ....+.++.|..-.+.+.+.+.++. -. .++.+|- .. ...    ....-+ . ..+
T Consensus        97 a~~~advVvi~aG~prkpG--mtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsN-Pv-d~~----~~i~~~~~~g~~  168 (345)
T 4h7p_A           97 AFDGVAIAIMCGAFPRKAG--MERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGN-PA-NTN----ALILLKSAQGKL  168 (345)
T ss_dssp             HTTTCSEEEECCCCCCCTT--CCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS-SH-HHH----HHHHHHHTTTCS
T ss_pred             HhCCCCEEEECCCCCCCCC--CCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCC-Cc-chH----HHHHHHHccCCC
Confidence            7899999999999765432  3467899999999999999998864 22 4455552 11 000    000000 0 000


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCC
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQ  200 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~  200 (307)
                      .+      ....+.+....-++-..++++.+++...++-..|.|....
T Consensus       169 ~~------r~i~~~t~LDs~R~~~~la~~~~v~~~~V~~~~V~G~HG~  210 (345)
T 4h7p_A          169 NP------RHVTAMTRLDHNRALSLLARKAGVPVSQVRNVIIWGNHSS  210 (345)
T ss_dssp             CG------GGEEECCHHHHHHHHHHHHHHHTSCGGGEECCEEEBCSST
T ss_pred             Cc------ceeeeccchhHHHHHHHHHHHHCcChhheecceeecCCCC
Confidence            11      1233344444444444455567887777776667775443

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.35  E-value=0.0012  Score=56.59  Aligned_cols=114  Identities=12%  Similarity=0.097  Sum_probs=76.4

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcc----cccCCCCCCCceEEEEcccCChhHHHHHhcCc
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFALPGAGDANLRVFEADVLDSGAVSRAVEGC   81 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~   81 (307)
                      .+.+||.|+|+ |.+|+.++..|+.+|. .+|+.++++..+.+.    +........ ....+..  .|++    .++++
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~-~~~i~~~--~d~~----~~~~a   88 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLK-TPKIVSS--KDYS----VTANS   88 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCS-CCEEEEC--SSGG----GGTTE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccC-CCeEEEc--CCHH----HhCCC
Confidence            34679999997 9999999999999985 578888886543221    111000000 1122222  2333    47899


Q ss_pred             cEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCC-cEEEEec
Q 021819           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV-RRVVVTS  130 (307)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~iS  130 (307)
                      |+||.+||.....  -....+.++.|....+.+.+.+.+++- ..++.+|
T Consensus        89 DiVvi~aG~~~kp--G~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvt  136 (331)
T 4aj2_A           89 KLVIITAGARQQE--GESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVS  136 (331)
T ss_dssp             EEEEECCSCCCCT--TCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CEEEEccCCCCCC--CccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9999999875432  234568999999999999999988853 3555555

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=97.35  E-value=1.9e-05  Score=66.69  Aligned_cols=80  Identities=10%  Similarity=-0.012  Sum_probs=50.6

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      .++++++|||++ .+|+++++.|++.|  +|++.+|+.++.+.+.............+.+|+.+.   .+.+.++|+|||
T Consensus       126 l~~k~vlV~GaG-giG~aia~~L~~~G--~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~---~~~~~~~DilVn  199 (287)
T 1nvt_A          126 VKDKNIVIYGAG-GAARAVAFELAKDN--NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL---DVDLDGVDIIIN  199 (287)
T ss_dssp             CCSCEEEEECCS-HHHHHHHHHHTSSS--EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT---TCCCTTCCEEEE
T ss_pred             cCCCEEEEECch-HHHHHHHHHHHHCC--CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH---HHhhCCCCEEEE
Confidence            457899999985 99999999999999  788888875544333211000000000012344442   344568999999


Q ss_pred             eccCCC
Q 021819           87 VASPCT   92 (307)
Q Consensus        87 ~a~~~~   92 (307)
                      +++...
T Consensus       200 ~ag~~~  205 (287)
T 1nvt_A          200 ATPIGM  205 (287)
T ss_dssp             CSCTTC
T ss_pred             CCCCCC
Confidence            998654

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.35  E-value=0.0002  Score=61.24  Aligned_cols=112  Identities=15%  Similarity=0.124  Sum_probs=72.3

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcc----cccCCC-CCCCceEEEEcccCChhHHHHHhcCccE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH----LFALPG-AGDANLRVFEADVLDSGAVSRAVEGCKG   83 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~----~~~~~~-~~~~~~~~i~~D~~d~~~~~~~~~~~d~   83 (307)
                      ++||.|+|+ |.+|..++..|+..|..+|+.+++++.+.+.    +..... ... ..++...  +|+    +.++++|+
T Consensus         7 ~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~-~~~v~~t--~d~----~a~~~aDi   78 (324)
T 3gvi_A            7 RNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGF-DAKFTGA--NDY----AAIEGADV   78 (324)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTC-CCCEEEE--SSG----GGGTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCC-CCEEEEe--CCH----HHHCCCCE
Confidence            569999998 9999999999999986578888887654321    110000 000 1111111  122    46789999


Q ss_pred             EEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEec
Q 021819           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTS  130 (307)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~iS  130 (307)
                      ||.++|......  ....+.+..|......+.+.+.+.+-. .++.+|
T Consensus        79 VIiaag~p~k~G--~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvt  124 (324)
T 3gvi_A           79 VIVTAGVPRKPG--MSRDDLLGINLKVMEQVGAGIKKYAPEAFVICIT  124 (324)
T ss_dssp             EEECCSCCCC-------CHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEEccCcCCCCC--CCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecC
Confidence            999998654322  234567888999999999999887633 455555

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.35  E-value=0.00081  Score=56.40  Aligned_cols=103  Identities=10%  Similarity=0.133  Sum_probs=66.5

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc----------------------CCCCCCCceEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA----------------------LPGAGDANLRVF   64 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~----------------------~~~~~~~~~~~i   64 (307)
                      ++.++|+|.|+ |++|+.+++.|...|..++..++.+.-...++.+                      +.+  ..+++.+
T Consensus        34 L~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP--~v~v~~~  110 (292)
T 3h8v_A           34 IRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINP--DVLFEVH  110 (292)
T ss_dssp             GGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCT--TSEEEEE
T ss_pred             HhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCC--CcEEEEe
Confidence            45679999995 9999999999999998889988875422222211                      111  1145666


Q ss_pred             EcccCChhHHHHHh-----------cCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEec
Q 021819           65 EADVLDSGAVSRAV-----------EGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (307)
Q Consensus        65 ~~D~~d~~~~~~~~-----------~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iS  130 (307)
                      ..++++.+.+.+++           +++|+||.+.-                 |+..-..+.++|.+.++. +|+.+
T Consensus       111 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D-----------------n~~~R~~in~~c~~~~~P-li~~g  169 (292)
T 3h8v_A          111 NYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD-----------------NFEARMTINTACNELGQT-WMESG  169 (292)
T ss_dssp             CCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS-----------------SHHHHHHHHHHHHHHTCC-EEEEE
T ss_pred             cccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc-----------------chhhhhHHHHHHHHhCCC-EEEee
Confidence            66777655565554           57899998731                 223334577788888754 66654

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.34  E-value=0.00015  Score=62.05  Aligned_cols=113  Identities=16%  Similarity=0.086  Sum_probs=74.2

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCCC---CCceEEEEcccCChhHHHHHhcCccEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAG---DANLRVFEADVLDSGAVSRAVEGCKGV   84 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~---~~~~~~i~~D~~d~~~~~~~~~~~d~v   84 (307)
                      ++||.|+|+ |.+|..++..|+..|..+|+.+++++.+.+... .+....   .....+...  .|+    +.++++|+|
T Consensus         5 ~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~----~a~~~aDvV   77 (321)
T 3p7m_A            5 RKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDY----KDLENSDVV   77 (321)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCG----GGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCH----HHHCCCCEE
Confidence            468999995 999999999999987647888888765432111 110000   001222211  122    467899999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEec
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTS  130 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~iS  130 (307)
                      |.++|......  ....+.+..|......+++.+.+.+-. .++.+|
T Consensus        78 Ii~ag~p~k~G--~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  122 (321)
T 3p7m_A           78 IVTAGVPRKPG--MSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT  122 (321)
T ss_dssp             EECCSCCCCTT--CCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEcCCcCCCCC--CCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            99998754322  235677889999999999999888633 555554

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.33  E-value=0.00021  Score=61.92  Aligned_cols=73  Identities=7%  Similarity=0.038  Sum_probs=53.0

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhH---HHHHh--cCccEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA---VSRAV--EGCKGV   84 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~---~~~~~--~~~d~v   84 (307)
                      ++++|+||+|.||...++.+...|. +|+++++++.+.+.++++      +...+ .|..+.+.   +.++.  .++|+|
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~~------Ga~~~-~~~~~~~~~~~v~~~~~~~g~D~v  237 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQIALLKDI------GAAHV-LNEKAPDFEATLREVMKAEQPRIF  237 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHH------TCSEE-EETTSTTHHHHHHHHHHHHCCCEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc------CCCEE-EECCcHHHHHHHHHHhcCCCCcEE
Confidence            6899999999999999999999999 999999987776666554      22211 24434332   33332  279999


Q ss_pred             EEeccC
Q 021819           85 FHVASP   90 (307)
Q Consensus        85 i~~a~~   90 (307)
                      |+++|.
T Consensus       238 id~~g~  243 (349)
T 3pi7_A          238 LDAVTG  243 (349)
T ss_dssp             EESSCH
T ss_pred             EECCCC
Confidence            999874

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.33  E-value=0.00019  Score=61.94  Aligned_cols=74  Identities=16%  Similarity=0.124  Sum_probs=53.4

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChh---HHHHHhcCccEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AVSRAVEGCKGV   84 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~---~~~~~~~~~d~v   84 (307)
                      .+++|+|+|+ |.+|..+++.+...|. +|+++++++.+.+.++.+      ++..+ .|..+.+   .+.+...++|+|
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~l------Ga~~~-~d~~~~~~~~~~~~~~~~~d~v  234 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKEL------GADLV-VNPLKEDAAKFMKEKVGGVHAA  234 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT------TCSEE-ECTTTSCHHHHHHHHHSSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHC------CCCEE-ecCCCccHHHHHHHHhCCCCEE
Confidence            4679999999 7799999999999999 999999887666655544      22222 3555432   233333579999


Q ss_pred             EEeccC
Q 021819           85 FHVASP   90 (307)
Q Consensus        85 i~~a~~   90 (307)
                      |+++|.
T Consensus       235 id~~g~  240 (339)
T 1rjw_A          235 VVTAVS  240 (339)
T ss_dssp             EESSCC
T ss_pred             EECCCC
Confidence            999874

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.30  E-value=0.00017  Score=62.41  Aligned_cols=72  Identities=21%  Similarity=0.238  Sum_probs=50.9

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCCh---hHHHHHhc--Ccc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS---GAVSRAVE--GCK   82 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~---~~~~~~~~--~~d   82 (307)
                      .+.+|+|+||+|.||...++.+...|. +|+++ +++.+.+.++++      ++..  .| .+.   +.+.+...  ++|
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~l------Ga~~--i~-~~~~~~~~~~~~~~~~g~D  218 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDL------GATP--ID-ASREPEDYAAEHTAGQGFD  218 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHH------TSEE--EE-TTSCHHHHHHHHHTTSCEE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHc------CCCE--ec-cCCCHHHHHHHHhcCCCce
Confidence            467999999999999999999999999 89988 655555555444      3333  33 332   22333332  689


Q ss_pred             EEEEeccC
Q 021819           83 GVFHVASP   90 (307)
Q Consensus        83 ~vi~~a~~   90 (307)
                      +||+++|.
T Consensus       219 ~vid~~g~  226 (343)
T 3gaz_A          219 LVYDTLGG  226 (343)
T ss_dssp             EEEESSCT
T ss_pred             EEEECCCc
Confidence            99999873

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.26  E-value=0.00052  Score=60.07  Aligned_cols=74  Identities=14%  Similarity=0.126  Sum_probs=51.3

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHh--cCccEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV--EGCKGVF   85 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~--~~~d~vi   85 (307)
                      .+.+|+|+||+|.||...++.+...|. +|+++++ +.+.+.++++      +...+ .|..+.+..+++.  .++|+||
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga-~Vi~~~~-~~~~~~~~~l------Ga~~v-~~~~~~~~~~~~~~~~g~D~vi  253 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDA-HVTAVCS-QDASELVRKL------GADDV-IDYKSGSVEEQLKSLKPFDFIL  253 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC-GGGHHHHHHT------TCSEE-EETTSSCHHHHHHTSCCBSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEeC-hHHHHHHHHc------CCCEE-EECCchHHHHHHhhcCCCCEEE
Confidence            467999999999999999999999999 8988874 4444444444      22221 2444433333332  4799999


Q ss_pred             EeccC
Q 021819           86 HVASP   90 (307)
Q Consensus        86 ~~a~~   90 (307)
                      +++|.
T Consensus       254 d~~g~  258 (375)
T 2vn8_A          254 DNVGG  258 (375)
T ss_dssp             ESSCT
T ss_pred             ECCCC
Confidence            99875

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.23  E-value=0.00031  Score=61.03  Aligned_cols=76  Identities=12%  Similarity=0.067  Sum_probs=57.0

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEccc------------------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV------------------   68 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~------------------   68 (307)
                      ...++|+|+|+ |-+|...++.|...|. +|++++|++...+.+..+      +..++..|+                  
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~l------Ga~~~~l~~~~~~~~gya~~~~~~~~~  253 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRSV------GAQWLDLGIDAAGEGGYARELSEAERA  253 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHHT------TCEECCCC-------------CHHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc------CCeEEeccccccccccchhhhhHHHHh
Confidence            35679999997 9999999999999999 899999988766655554      334433221                  


Q ss_pred             CChhHHHHHhcCccEEEEeccC
Q 021819           69 LDSGAVSRAVEGCKGVFHVASP   90 (307)
Q Consensus        69 ~d~~~~~~~~~~~d~vi~~a~~   90 (307)
                      .+.+.+.++++++|+||.++..
T Consensus       254 ~~~~~l~e~l~~aDIVI~tv~i  275 (381)
T 3p2y_A          254 QQQQALEDAITKFDIVITTALV  275 (381)
T ss_dssp             HHHHHHHHHHTTCSEEEECCCC
T ss_pred             hhHHHHHHHHhcCCEEEECCCC
Confidence            1235677888999999998644

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=97.21  E-value=0.0015  Score=57.13  Aligned_cols=70  Identities=14%  Similarity=0.161  Sum_probs=53.5

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      ..+++|+|.|+ |.+|+.+++.+.+.|+ +|++++..+....  ...      --..+..|..|.+.+.++++.+|+|.-
T Consensus        10 ~~~~~IlIlG~-G~lg~~la~aa~~lG~-~viv~d~~~~~p~--~~~------ad~~~~~~~~d~~~l~~~~~~~dvi~~   79 (377)
T 3orq_A           10 KFGATIGIIGG-GQLGKMMAQSAQKMGY-KVVVLDPSEDCPC--RYV------AHEFIQAKYDDEKALNQLGQKCDVITY   79 (377)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCTTCTT--GGG------SSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEECCCCChh--hhh------CCEEEECCCCCHHHHHHHHHhCCccee
Confidence            45789999995 8899999999999999 8888887543211  111      113566899999999999999998743

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.21  E-value=0.00072  Score=57.49  Aligned_cols=112  Identities=13%  Similarity=0.080  Sum_probs=71.3

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcccc-cCCCC---CCCceEEEEcccCChhHHHHHhcCccEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLF-ALPGA---GDANLRVFEADVLDSGAVSRAVEGCKGV   84 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~-~~~~~---~~~~~~~i~~D~~d~~~~~~~~~~~d~v   84 (307)
                      |||.|+|+ |.+|+.++..|+..|. .+|+.+++++.+.+... .+...   .....++...|  +    .+.++++|+|
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~----~~a~~~aDvV   73 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--D----YGPTEDSDVC   73 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--S----SGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--C----HHHhCCCCEE
Confidence            48999996 9999999999998875 48999998765432110 00000   00012222111  2    2457899999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEec
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTS  130 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~iS  130 (307)
                      |.++|......  ....+.+..|....+.+.+.+.+++-. .++.+|
T Consensus        74 ii~ag~~~kpG--~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  118 (314)
T 3nep_X           74 IITAGLPRSPG--MSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA  118 (314)
T ss_dssp             EECCCC---------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred             EECCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC
Confidence            99998754322  235678899999999999999888633 455554

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.21  E-value=6.9e-05  Score=63.20  Aligned_cols=111  Identities=14%  Similarity=0.071  Sum_probs=74.3

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcc----cccCC-CCCCCceEEEEcccCChhHHHHHhcCccE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFALP-GAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~----~~~~~-~~~~~~~~~i~~D~~d~~~~~~~~~~~d~   83 (307)
                      |||.|+|+ |.+|..++..|..+|. .+|...++++...+.    +.... .... ...+...  +|    .+.++++|+
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~-~~~i~~t--~d----~~a~~~aDi   72 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDK-YPKIVGG--AD----YSLLKGSEI   72 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTC-CCEEEEE--SC----GGGGTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCC-CCEEEEe--CC----HHHhCCCCE
Confidence            48999999 9999999999998875 479999987654321    11100 0000 1222211  12    346789999


Q ss_pred             EEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCC-cEEEEec
Q 021819           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV-RRVVVTS  130 (307)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~iS  130 (307)
                      ||.++|......  ....+.+..|......+.+.+.+.+- ..++.+|
T Consensus        73 VViaag~~~kpG--~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs  118 (294)
T 1oju_A           73 IVVTAGLARKPG--MTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             EEECCCCCCCSS--CCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EEECCCCCCCCC--CcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            999998754322  33567889999999999999988863 3455555

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.21  E-value=0.0032  Score=51.75  Aligned_cols=105  Identities=15%  Similarity=0.112  Sum_probs=66.3

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCC--------C-----------C--CCCceEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP--------G-----------A--GDANLRVFE   65 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~--------~-----------~--~~~~~~~i~   65 (307)
                      ++.++|+|.|+ |++|+++++.|...|..++..++++.-...++.+..        .           .  ...++..+.
T Consensus        26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  104 (251)
T 1zud_1           26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ  104 (251)
T ss_dssp             HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence            34579999996 779999999999999988888877543222221110        0           0  011344444


Q ss_pred             cccCChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           66 ADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        66 ~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      .+++ .+.+.++++++|+||++...                 ...-..+.++|.+.++. +|+.+.
T Consensus       105 ~~~~-~~~~~~~~~~~DvVi~~~d~-----------------~~~r~~l~~~~~~~~~p-~i~~~~  151 (251)
T 1zud_1          105 QRLT-GEALKDAVARADVVLDCTDN-----------------MATRQEINAACVALNTP-LITASA  151 (251)
T ss_dssp             SCCC-HHHHHHHHHHCSEEEECCSS-----------------HHHHHHHHHHHHHTTCC-EEEEEE
T ss_pred             ccCC-HHHHHHHHhcCCEEEECCCC-----------------HHHHHHHHHHHHHhCCC-EEEEec
Confidence            4443 45677788899999998321                 11234566778877754 666553

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=97.19  E-value=0.00038  Score=59.57  Aligned_cols=68  Identities=15%  Similarity=0.196  Sum_probs=49.7

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      .++|+|.|.| .|.+|+.+++.|.+.|+ +|++.+|+++..+.+...      ++..       ..+..++++++|+||-
T Consensus        29 ~~~~~I~iIG-~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~------g~~~-------~~~~~e~~~~aDvVi~   93 (320)
T 4dll_A           29 PYARKITFLG-TGSMGLPMARRLCEAGY-ALQVWNRTPARAASLAAL------GATI-------HEQARAAARDADIVVS   93 (320)
T ss_dssp             CCCSEEEEEC-CTTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT------TCEE-------ESSHHHHHTTCSEEEE
T ss_pred             cCCCEEEEEC-ccHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHC------CCEe-------eCCHHHHHhcCCEEEE
Confidence            4467999998 59999999999999999 999999987655544332      2221       1234566778888888


Q ss_pred             ecc
Q 021819           87 VAS   89 (307)
Q Consensus        87 ~a~   89 (307)
                      +..
T Consensus        94 ~vp   96 (320)
T 4dll_A           94 MLE   96 (320)
T ss_dssp             CCS
T ss_pred             ECC
Confidence            753

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=97.18  E-value=0.00081  Score=58.35  Aligned_cols=117  Identities=16%  Similarity=0.059  Sum_probs=71.8

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCC-Ce---EEEEeCCCCCC-cccc----cCCCCCCCceEEEEcccCChhHHHHHh
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNY-TS---INATVFPGSDS-SHLF----ALPGAGDANLRVFEADVLDSGAVSRAV   78 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~-~~---V~~~~r~~~~~-~~~~----~~~~~~~~~~~~i~~D~~d~~~~~~~~   78 (307)
                      +.+||.|+||+|.||++++-.|+..+. .+   |...+...+.. +.++    .+......-..-+  .+.+  .-.+.+
T Consensus        31 ~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v--~i~~--~~y~~~  106 (375)
T 7mdh_A           31 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREV--SIGI--DPYEVF  106 (375)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEE--EEES--CHHHHT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCc--EEec--CCHHHh
Confidence            356999999999999999999998864 22   55543322221 0010    0100000011111  1221  124567


Q ss_pred             cCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhc-C-CcEEEEec
Q 021819           79 EGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-G-VRRVVVTS  130 (307)
Q Consensus        79 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~~v~iS  130 (307)
                      +++|+||-+||.....  -....+.++.|....+.+.+.+.++ + -..++.+|
T Consensus       107 ~daDvVVitag~prkp--G~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvs  158 (375)
T 7mdh_A          107 EDVDWALLIGAKPRGP--GMERAALLDINGQIFADQGKALNAVASKNVKVLVVG  158 (375)
T ss_dssp             TTCSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             CCCCEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            8999999998875432  2346789999999999999999875 3 34555555

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=97.18  E-value=0.0029  Score=54.72  Aligned_cols=104  Identities=13%  Similarity=0.010  Sum_probs=68.9

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCC---------------------CCCCceEEEEc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG---------------------AGDANLRVFEA   66 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~---------------------~~~~~~~~i~~   66 (307)
                      +.++|+|.|+ |++|+.+++.|...|..++..++++.-...++....-                     ....+++.+..
T Consensus       117 ~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~  195 (353)
T 3h5n_A          117 KNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIAL  195 (353)
T ss_dssp             HTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred             hCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeec
Confidence            4679999996 8899999999999999889999886443333322110                     01115666777


Q ss_pred             ccCChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEec
Q 021819           67 DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (307)
Q Consensus        67 D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iS  130 (307)
                      ++++..++.+ ++++|+||.+...  .    ..          .-..+-++|.+.++. +|+.+
T Consensus       196 ~i~~~~~~~~-~~~~DlVvd~~Dn--~----~~----------~r~~ln~~c~~~~~p-~i~~~  241 (353)
T 3h5n_A          196 NINDYTDLHK-VPEADIWVVSADH--P----FN----------LINWVNKYCVRANQP-YINAG  241 (353)
T ss_dssp             CCCSGGGGGG-SCCCSEEEECCCC--S----TT----------HHHHHHHHHHHTTCC-EEEEE
T ss_pred             ccCchhhhhH-hccCCEEEEecCC--h----HH----------HHHHHHHHHHHhCCC-EEEEE
Confidence            7776654656 8899999997421  1    00          123456788888864 66654

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=97.17  E-value=0.0004  Score=60.22  Aligned_cols=105  Identities=17%  Similarity=0.131  Sum_probs=57.1

Q ss_pred             CccccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCC-----C-C--CCceEEEEcccCChh
Q 021819            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG-----A-G--DANLRVFEADVLDSG   72 (307)
Q Consensus         1 m~~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-----~-~--~~~~~~i~~D~~d~~   72 (307)
                      |+.|+  ++.+|.|.||||++|..|++.|.+..+.++..+..+.+.-+.+....+     . .  .....+.  + .+.+
T Consensus         1 ~~~M~--~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~--~-~~~~   75 (359)
T 4dpk_A            1 MILMR--RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIK--P-TDPK   75 (359)
T ss_dssp             -------CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCE--E-CCGG
T ss_pred             CCcCC--CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEE--e-CCHH
Confidence            55443  356999999999999999998876654466666543322222211000     0 0  0011111  1 1222


Q ss_pred             HHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcc
Q 021819           73 AVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS  133 (307)
Q Consensus        73 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~  133 (307)
                      +    ++++|+||-|.+...                  +..+...+.+.|. ++|=.|+..
T Consensus        76 ~----~~~vDvvf~a~p~~~------------------s~~~a~~~~~~G~-~vIDlSa~~  113 (359)
T 4dpk_A           76 L----MDDVDIIFSPLPQGA------------------AGPVEEQFAKEGF-PVISNSPDH  113 (359)
T ss_dssp             G----CTTCCEEEECCCTTT------------------HHHHHHHHHHTTC-EEEECSSTT
T ss_pred             H----hcCCCEEEECCChHH------------------HHHHHHHHHHCCC-EEEEcCCCc
Confidence            2    468999999976421                  3345555667775 577778743

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=97.17  E-value=0.0004  Score=60.22  Aligned_cols=105  Identities=17%  Similarity=0.131  Sum_probs=57.1

Q ss_pred             CccccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCC-----C-C--CCceEEEEcccCChh
Q 021819            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG-----A-G--DANLRVFEADVLDSG   72 (307)
Q Consensus         1 m~~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-----~-~--~~~~~~i~~D~~d~~   72 (307)
                      |+.|+  ++.+|.|.||||++|..|++.|.+..+.++..+..+.+.-+.+....+     . .  .....+.  + .+.+
T Consensus         1 ~~~M~--~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~--~-~~~~   75 (359)
T 4dpl_A            1 MILMR--RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIK--P-TDPK   75 (359)
T ss_dssp             -------CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCE--E-CCGG
T ss_pred             CCcCC--CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEE--e-CCHH
Confidence            55443  356999999999999999998876654466666543322222211000     0 0  0011111  1 1222


Q ss_pred             HHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcc
Q 021819           73 AVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS  133 (307)
Q Consensus        73 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~  133 (307)
                      +    ++++|+||-|.+...                  +..+...+.+.|. ++|=.|+..
T Consensus        76 ~----~~~vDvvf~a~p~~~------------------s~~~a~~~~~~G~-~vIDlSa~~  113 (359)
T 4dpl_A           76 L----MDDVDIIFSPLPQGA------------------AGPVEEQFAKEGF-PVISNSPDH  113 (359)
T ss_dssp             G----CTTCCEEEECCCTTT------------------HHHHHHHHHHTTC-EEEECSSTT
T ss_pred             H----hcCCCEEEECCChHH------------------HHHHHHHHHHCCC-EEEEcCCCc
Confidence            2    468999999976421                  3345555667775 577778743

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.17  E-value=0.0015  Score=56.12  Aligned_cols=94  Identities=18%  Similarity=0.171  Sum_probs=57.3

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCC--CCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g--~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      |++|.|.||+|.+|+.+++.|.+++  ..+++++....+....+. +..  . .+.+  .|. +++    .++++|+||-
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~-~~~--~-~i~~--~~~-~~~----~~~~vDvVf~   71 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYR-FNG--K-TVRV--QNV-EEF----DWSQVHIALF   71 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEE-ETT--E-EEEE--EEG-GGC----CGGGCSEEEE
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCcee-ecC--c-eeEE--ecC-ChH----HhcCCCEEEE
Confidence            5699999999999999999999873  236666653221111111 110  0 2222  222 122    2368999999


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCc
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~  132 (307)
                      |.+..                  .+...++.+.+.|. ++|-.|+.
T Consensus        72 a~g~~------------------~s~~~a~~~~~~G~-~vId~s~~   98 (336)
T 2r00_A           72 SAGGE------------------LSAKWAPIAAEAGV-VVIDNTSH   98 (336)
T ss_dssp             CSCHH------------------HHHHHHHHHHHTTC-EEEECSST
T ss_pred             CCCch------------------HHHHHHHHHHHcCC-EEEEcCCc
Confidence            86541                  24456666777786 57777874

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=97.16  E-value=0.00051  Score=58.51  Aligned_cols=68  Identities=18%  Similarity=0.222  Sum_probs=48.7

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      ..+||+|.|.| .|.+|..+++.|.+.|+ +|++.+|+++..+.+...      ++..       ..+..++++++|+||
T Consensus        18 ~~~m~~I~iIG-~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~l~~~------g~~~-------~~~~~~~~~~aDvvi   82 (310)
T 3doj_A           18 GSHMMEVGFLG-LGIMGKAMSMNLLKNGF-KVTVWNRTLSKCDELVEH------GASV-------CESPAEVIKKCKYTI   82 (310)
T ss_dssp             CCCSCEEEEEC-CSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHT------TCEE-------CSSHHHHHHHCSEEE
T ss_pred             cccCCEEEEEC-ccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHC------CCeE-------cCCHHHHHHhCCEEE
Confidence            34578999998 69999999999999999 999999987766555432      2221       122344556677777


Q ss_pred             Eec
Q 021819           86 HVA   88 (307)
Q Consensus        86 ~~a   88 (307)
                      -+.
T Consensus        83 ~~v   85 (310)
T 3doj_A           83 AML   85 (310)
T ss_dssp             ECC
T ss_pred             EEc
Confidence            664

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.16  E-value=0.0005  Score=58.81  Aligned_cols=113  Identities=10%  Similarity=0.058  Sum_probs=69.9

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCC-----CCCCceEEEEcccCChhHHHHHhcCcc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPG-----AGDANLRVFEADVLDSGAVSRAVEGCK   82 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~-----~~~~~~~~i~~D~~d~~~~~~~~~~~d   82 (307)
                      ++||.|+|| |.+|..++..|+..|..+|+++++++...+.... +..     ....++...    +|   . +.++++|
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t----~d---~-~al~~aD   74 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS----NT---Y-DDLAGAD   74 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE----CC---G-GGGTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC----CC---H-HHhCCCC
Confidence            468999998 9999999999999987458888887654331111 000     000022211    22   2 4578999


Q ss_pred             EEEEeccCCCCCCCC---ChhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEec
Q 021819           83 GVFHVASPCTLEDPV---DPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTS  130 (307)
Q Consensus        83 ~vi~~a~~~~~~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~iS  130 (307)
                      +||.+++........   .........|....+.+.+.+.+..-. .+|.+|
T Consensus        75 ~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  126 (322)
T 1t2d_A           75 VVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  126 (322)
T ss_dssp             EEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            999999764321110   013456777888888888888776433 444443

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.15  E-value=0.00057  Score=57.93  Aligned_cols=72  Identities=13%  Similarity=0.173  Sum_probs=54.0

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      +..+++++|.|+ |.||+.+++.|...|. +|++.+|+..+.+.+...      ++..+     +.+++.++++++|+|+
T Consensus       154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~------g~~~~-----~~~~l~~~l~~aDvVi  220 (300)
T 2rir_A          154 TIHGSQVAVLGL-GRTGMTIARTFAALGA-NVKVGARSSAHLARITEM------GLVPF-----HTDELKEHVKDIDICI  220 (300)
T ss_dssp             CSTTSEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT------TCEEE-----EGGGHHHHSTTCSEEE
T ss_pred             CCCCCEEEEEcc-cHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHC------CCeEE-----chhhHHHHhhCCCEEE
Confidence            456789999995 9999999999999999 999999976543333222      33322     2245778889999999


Q ss_pred             EeccC
Q 021819           86 HVASP   90 (307)
Q Consensus        86 ~~a~~   90 (307)
                      .+...
T Consensus       221 ~~~p~  225 (300)
T 2rir_A          221 NTIPS  225 (300)
T ss_dssp             ECCSS
T ss_pred             ECCCh
Confidence            99765

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=97.14  E-value=0.0006  Score=56.19  Aligned_cols=69  Identities=22%  Similarity=0.241  Sum_probs=51.7

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      ++ +++|+|+ |.+|++++..|.+.|..+|++..|+.++.+.+..       .+...     ..+++.+.++++|+||++
T Consensus       108 ~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~-------~~~~~-----~~~~~~~~~~~aDiVIna  173 (253)
T 3u62_A          108 KE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDF-------PVKIF-----SLDQLDEVVKKAKSLFNT  173 (253)
T ss_dssp             CS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCS-------SCEEE-----EGGGHHHHHHTCSEEEEC
T ss_pred             CC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH-------HcccC-----CHHHHHhhhcCCCEEEEC
Confidence            46 8999996 9999999999999998789999998765544432       22221     224566778899999998


Q ss_pred             ccC
Q 021819           88 ASP   90 (307)
Q Consensus        88 a~~   90 (307)
                      ...
T Consensus       174 tp~  176 (253)
T 3u62_A          174 TSV  176 (253)
T ss_dssp             SST
T ss_pred             CCC
Confidence            754

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=97.14  E-value=6.3e-05  Score=68.91  Aligned_cols=73  Identities=18%  Similarity=0.090  Sum_probs=45.7

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHH-HhcCccEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSR-AVEGCKGVF   85 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~-~~~~~d~vi   85 (307)
                      .++++++|||| |++|++++..|++.|+ +|++..|+.++.+.+......   .+  +  ++.|   +.+ ....+|++|
T Consensus       362 l~~k~vlV~Ga-GGig~aia~~L~~~G~-~V~i~~R~~~~a~~la~~~~~---~~--~--~~~d---l~~~~~~~~DilV  429 (523)
T 2o7s_A          362 LASKTVVVIGA-GGAGKALAYGAKEKGA-KVVIANRTYERALELAEAIGG---KA--L--SLTD---LDNYHPEDGMVLA  429 (523)
T ss_dssp             ----CEEEECC-SHHHHHHHHHHHHHCC--CEEEESSHHHHHHHHHHTTC----C--E--ETTT---TTTC--CCSEEEE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCC---ce--e--eHHH---hhhccccCceEEE
Confidence            34678999999 7999999999999999 899999976554443322110   11  1  1222   222 124589999


Q ss_pred             EeccCC
Q 021819           86 HVASPC   91 (307)
Q Consensus        86 ~~a~~~   91 (307)
                      |++|..
T Consensus       430 N~agvg  435 (523)
T 2o7s_A          430 NTTSMG  435 (523)
T ss_dssp             ECSSTT
T ss_pred             ECCCCC
Confidence            999864

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.13  E-value=0.00042  Score=60.30  Aligned_cols=74  Identities=11%  Similarity=0.045  Sum_probs=54.3

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCCh-hHHHHHhcCccEEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS-GAVSRAVEGCKGVFH   86 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~-~~~~~~~~~~d~vi~   86 (307)
                      .+.+|+|+|+ |.+|...++.+...|. +|+++++++.+.+.++.+      +...+ .|..+. +..+++..++|+||+
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~l------Ga~~v-~~~~~~~~~~~~~~~~~D~vid  249 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKM------GADHY-IATLEEGDWGEKYFDTFDLIVV  249 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHH------TCSEE-EEGGGTSCHHHHSCSCEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHc------CCCEE-EcCcCchHHHHHhhcCCCEEEE
Confidence            4679999999 9999999999888899 899999988777666554      22222 244443 333333358999999


Q ss_pred             eccC
Q 021819           87 VASP   90 (307)
Q Consensus        87 ~a~~   90 (307)
                      ++|.
T Consensus       250 ~~g~  253 (360)
T 1piw_A          250 CASS  253 (360)
T ss_dssp             CCSC
T ss_pred             CCCC
Confidence            9876

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=97.11  E-value=0.00092  Score=58.71  Aligned_cols=75  Identities=17%  Similarity=0.100  Sum_probs=53.7

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccC----------------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL----------------   69 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~----------------   69 (307)
                      ...+++|+|+|+ |.+|...++.+...|. +|++.+|++...+.+..+      +..++..|..                
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~~------Ga~~~~i~~~~~~~~~~~~~~~~~~s  240 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGA-VVMATDVRAATKEQVESL------GGKFITVDDEAMKTAETAGGYAKEMG  240 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHT------TCEECCC-------------------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc------CCeEEeecccccccccccccchhhcC
Confidence            346789999995 9999999999999999 899999987665544443      2232211211                


Q ss_pred             ------ChhHHHHHhcCccEEEEec
Q 021819           70 ------DSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus        70 ------d~~~~~~~~~~~d~vi~~a   88 (307)
                            +.+.+.+.++++|+||+++
T Consensus       241 ~~~~~~~~~~l~~~~~~aDvVi~~~  265 (384)
T 1l7d_A          241 EEFRKKQAEAVLKELVKTDIAITTA  265 (384)
T ss_dssp             ----CCHHHHHHHHHTTCSEEEECC
T ss_pred             HHHHhhhHHHHHHHhCCCCEEEECC
Confidence                  1233777888999999987

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.10  E-value=0.00083  Score=58.84  Aligned_cols=77  Identities=16%  Similarity=0.131  Sum_probs=56.6

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcc----------------cCC
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEAD----------------VLD   70 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D----------------~~d   70 (307)
                      ....+|+|+|+ |-+|...++.+...|. +|+++++++...+.+..+      +..++..+                +++
T Consensus       188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~~------G~~~~~~~~~~~~d~~~~~~ya~e~s~  259 (405)
T 4dio_A          188 VPAAKIFVMGA-GVAGLQAIATARRLGA-VVSATDVRPAAKEQVASL------GAKFIAVEDEEFKAAETAGGYAKEMSG  259 (405)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHHT------TCEECCCCC-----------------C
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHc------CCceeecccccccccccccchhhhcch
Confidence            34679999997 9999999999999999 899999987765555443      22332222                222


Q ss_pred             ------hhHHHHHhcCccEEEEeccCC
Q 021819           71 ------SGAVSRAVEGCKGVFHVASPC   91 (307)
Q Consensus        71 ------~~~~~~~~~~~d~vi~~a~~~   91 (307)
                            .+.+.++++++|+||+++...
T Consensus       260 ~~~~~~~~~l~e~l~~aDVVI~tvlip  286 (405)
T 4dio_A          260 EYQVKQAALVAEHIAKQDIVITTALIP  286 (405)
T ss_dssp             HHHHHHHHHHHHHHHTCSEEEECCCCS
T ss_pred             hhhhhhHhHHHHHhcCCCEEEECCcCC
Confidence                  246788889999999987643

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.10  E-value=0.00039  Score=57.92  Aligned_cols=74  Identities=15%  Similarity=0.049  Sum_probs=51.1

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      .++++++|+|+ |++|+.++..|.+.|..+|+...|+.++.+.+...... . .+..+.  .   +++..  .++|+|||
T Consensus       118 l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~-~-~~~~~~--~---~~l~~--~~~DivIn  187 (272)
T 3pwz_A          118 LRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH-S-RLRISR--Y---EALEG--QSFDIVVN  187 (272)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC-T-TEEEEC--S---GGGTT--CCCSEEEE
T ss_pred             ccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc-C-CeeEee--H---HHhcc--cCCCEEEE
Confidence            45789999997 89999999999999966899999987665544332111 1 233332  2   22221  68999999


Q ss_pred             eccC
Q 021819           87 VASP   90 (307)
Q Consensus        87 ~a~~   90 (307)
                      +.+.
T Consensus       188 aTp~  191 (272)
T 3pwz_A          188 ATSA  191 (272)
T ss_dssp             CSSG
T ss_pred             CCCC
Confidence            8754

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.09  E-value=0.00069  Score=57.19  Aligned_cols=72  Identities=8%  Similarity=0.132  Sum_probs=53.6

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      +..+++++|.| .|.||+.+++.|...|. +|++.+|+....+.+...      ++..+     +.+++.++++++|+|+
T Consensus       152 ~l~g~~v~IiG-~G~iG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~------g~~~~-----~~~~l~~~l~~aDvVi  218 (293)
T 3d4o_A          152 TIHGANVAVLG-LGRVGMSVARKFAALGA-KVKVGARESDLLARIAEM------GMEPF-----HISKAAQELRDVDVCI  218 (293)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT------TSEEE-----EGGGHHHHTTTCSEEE
T ss_pred             CCCCCEEEEEe-eCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHC------CCeec-----ChhhHHHHhcCCCEEE
Confidence            35678999999 59999999999999999 999999876543333222      33332     2345778889999999


Q ss_pred             EeccC
Q 021819           86 HVASP   90 (307)
Q Consensus        86 ~~a~~   90 (307)
                      .+...
T Consensus       219 ~~~p~  223 (293)
T 3d4o_A          219 NTIPA  223 (293)
T ss_dssp             ECCSS
T ss_pred             ECCCh
Confidence            98753

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.09  E-value=0.00021  Score=59.76  Aligned_cols=76  Identities=16%  Similarity=0.107  Sum_probs=49.5

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      .++++++|+|+ |.+|++++..|++.|. +|++..|+.++.+.+........ .+..  .|+   +++.+  .++|+||+
T Consensus       117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~G~-~v~v~~R~~~~a~~l~~~~~~~~-~~~~--~~~---~~~~~--~~~DivIn  186 (272)
T 1p77_A          117 RPNQHVLILGA-GGATKGVLLPLLQAQQ-NIVLANRTFSKTKELAERFQPYG-NIQA--VSM---DSIPL--QTYDLVIN  186 (272)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGS-CEEE--EEG---GGCCC--SCCSEEEE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHccccC-CeEE--eeH---HHhcc--CCCCEEEE
Confidence            35789999997 7899999999999997 99999998665544432110000 1211  232   21110  38999999


Q ss_pred             eccCCC
Q 021819           87 VASPCT   92 (307)
Q Consensus        87 ~a~~~~   92 (307)
                      +++...
T Consensus       187 ~t~~~~  192 (272)
T 1p77_A          187 ATSAGL  192 (272)
T ss_dssp             CCCC--
T ss_pred             CCCCCC
Confidence            988643

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.08  E-value=0.00088  Score=57.18  Aligned_cols=111  Identities=9%  Similarity=0.105  Sum_probs=69.1

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcc----cccCCCCCCCceEEEEcccCChhHHHHHhcCccE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~   83 (307)
                      .+||.|+|| |.+|..++..|+.++. .+|..++++..+.+.    +........ .+++.. |  +    .+.++++|+
T Consensus         5 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~-~~~v~~-~--~----~~a~~~aDv   75 (318)
T 1ez4_A            5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTA-PKKIYS-G--E----YSDCKDADL   75 (318)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSC-CCEEEE-C--C----GGGGTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcC-CeEEEE-C--C----HHHhCCCCE
Confidence            469999998 9999999999998874 478888885433321    101000000 233322 2  2    234789999


Q ss_pred             EEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCC-cEEEEec
Q 021819           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV-RRVVVTS  130 (307)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~iS  130 (307)
                      ||.+++......  ....+.+..|......+.+.+.+.+- ..++.+|
T Consensus        76 Vii~ag~~~~~g--~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  121 (318)
T 1ez4_A           76 VVITAGAPQKPG--ESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (318)
T ss_dssp             EEECCCC------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEECCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence            999998754322  22346778999999999999988853 3455553

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=97.08  E-value=0.00028  Score=60.60  Aligned_cols=100  Identities=18%  Similarity=0.133  Sum_probs=59.1

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC---CCCccccc----CCCCCCCceEEEEcccCChhHHHHHhcC
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG---SDSSHLFA----LPGAGDANLRVFEADVLDSGAVSRAVEG   80 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~---~~~~~~~~----~~~~~~~~~~~i~~D~~d~~~~~~~~~~   80 (307)
                      .|++|.|.||||++|+.|++.|.+....++..+..+.   ..-+.+..    +....  ...+...  .+.+   ++.++
T Consensus         3 ~M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~--~~~v~~~--~~~~---~~~~~   75 (337)
T 3dr3_A            3 AMLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIV--ELPLQPM--SDIS---EFSPG   75 (337)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTC--CCBEEEE--SSGG---GTCTT
T ss_pred             CceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCcc--ceeEecc--CCHH---HHhcC
Confidence            3679999999999999999999985433777765543   22222211    11100  1112111  0222   23378


Q ss_pred             ccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcc
Q 021819           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSIS  133 (307)
Q Consensus        81 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~  133 (307)
                      +|+||-|.+..                  .+..+++.+.+.|. ++|-.|+..
T Consensus        76 ~Dvvf~a~p~~------------------~s~~~~~~~~~~g~-~vIDlSa~f  109 (337)
T 3dr3_A           76 VDVVFLATAHE------------------VSHDLAPQFLEAGC-VVFDLSGAF  109 (337)
T ss_dssp             CSEEEECSCHH------------------HHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             CCEEEECCChH------------------HHHHHHHHHHHCCC-EEEEcCCcc
Confidence            99999885431                  24456666667775 588888743

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.07  E-value=0.00067  Score=59.28  Aligned_cols=74  Identities=12%  Similarity=0.096  Sum_probs=55.1

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      .+.+|+|+|+ |.+|...++.+...|. +|+++++++.+.+.++++      ++..+ .|..+.+.++++..++|+||++
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~l------Ga~~v-i~~~~~~~~~~~~~g~Dvvid~  264 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKAL------GADEV-VNSRNADEMAAHLKSFDFILNT  264 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHH------TCSEE-EETTCHHHHHTTTTCEEEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc------CCcEE-eccccHHHHHHhhcCCCEEEEC
Confidence            4679999997 7899999999988999 799999887776665554      22221 3555555455554689999999


Q ss_pred             ccC
Q 021819           88 ASP   90 (307)
Q Consensus        88 a~~   90 (307)
                      +|.
T Consensus       265 ~g~  267 (369)
T 1uuf_A          265 VAA  267 (369)
T ss_dssp             CSS
T ss_pred             CCC
Confidence            875

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.07  E-value=0.00029  Score=59.96  Aligned_cols=73  Identities=11%  Similarity=0.101  Sum_probs=47.8

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEE--------EcccCChhHHHHHhcC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVF--------EADVLDSGAVSRAVEG   80 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i--------~~D~~d~~~~~~~~~~   80 (307)
                      ||+|.|.|+ |.+|+.++..|.+.|+ +|++++|+++..+.+...      ++...        ..+.++.+++.+.+++
T Consensus         3 ~m~i~iiG~-G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (316)
T 2ew2_A            3 AMKIAIAGA-GAMGSRLGIMLHQGGN-DVTLIDQWPAHIEAIRKN------GLIADFNGEEVVANLPIFSPEEIDHQNEQ   74 (316)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHH------CEEEEETTEEEEECCCEECGGGCCTTSCC
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhC------CEEEEeCCCeeEecceeecchhhcccCCC
Confidence            458999995 9999999999999999 999999976544433221      12211        1222233333334458


Q ss_pred             ccEEEEecc
Q 021819           81 CKGVFHVAS   89 (307)
Q Consensus        81 ~d~vi~~a~   89 (307)
                      +|+||-+..
T Consensus        75 ~d~vi~~v~   83 (316)
T 2ew2_A           75 VDLIIALTK   83 (316)
T ss_dssp             CSEEEECSC
T ss_pred             CCEEEEEec
Confidence            899988753

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.06  E-value=0.00044  Score=57.82  Aligned_cols=69  Identities=14%  Similarity=0.200  Sum_probs=51.2

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      .++++++|+|+ |+.|+.++..|.+.|..+|+...|+.++.+.+..       .+..+     +.+++.+ + ++|+|||
T Consensus       120 ~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~-------~~~~~-----~~~~l~~-l-~~DivIn  184 (282)
T 3fbt_A          120 IKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG-------EFKVI-----SYDELSN-L-KGDVIIN  184 (282)
T ss_dssp             CTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT-------TSEEE-----EHHHHTT-C-CCSEEEE
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH-------hcCcc-----cHHHHHh-c-cCCEEEE
Confidence            35789999996 8999999999999998789999998766555443       23222     2233444 4 8999999


Q ss_pred             eccC
Q 021819           87 VASP   90 (307)
Q Consensus        87 ~a~~   90 (307)
                      +.+.
T Consensus       185 aTp~  188 (282)
T 3fbt_A          185 CTPK  188 (282)
T ss_dssp             CSST
T ss_pred             CCcc
Confidence            9764

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=97.05  E-value=0.0032  Score=53.14  Aligned_cols=65  Identities=25%  Similarity=0.269  Sum_probs=43.8

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEecc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a~   89 (307)
                      +||-+.| .|.+|..+++.|++.|+ +|++.+|++++.+.+...      ++...       ++..++++++|+||-+..
T Consensus         6 ~kIgfIG-LG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~------G~~~~-------~s~~e~~~~~dvvi~~l~   70 (297)
T 4gbj_A            6 EKIAFLG-LGNLGTPIAEILLEAGY-ELVVWNRTASKAEPLTKL------GATVV-------ENAIDAITPGGIVFSVLA   70 (297)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTC-EEEEC-------CTTTTT------TCEEC-------SSGGGGCCTTCEEEECCS
T ss_pred             CcEEEEe-cHHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHc------CCeEe-------CCHHHHHhcCCceeeecc
Confidence            4799998 69999999999999999 999999988776655433      33221       234456788999998743

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=97.05  E-value=0.0017  Score=57.46  Aligned_cols=68  Identities=21%  Similarity=0.241  Sum_probs=51.8

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC-CcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      +++|+|+|+ |.+|+.+++.+.+.|+ +|++++ .+.. ......       ....+.+|..|.+.+.++++.+|+|+-
T Consensus        24 ~~~I~ilGg-G~lg~~l~~aa~~lG~-~v~~~d-~~~~p~~~~ad-------~~~~~~~~~~d~~~l~~~a~~~d~i~~   92 (403)
T 3k5i_A           24 SRKVGVLGG-GQLGRMLVESANRLNI-QVNVLD-ADNSPAKQISA-------HDGHVTGSFKEREAVRQLAKTCDVVTA   92 (403)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTC-EEEEEE-STTCTTGGGCC-------SSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEE-CCCCcHHHhcc-------ccceeecCCCCHHHHHHHHHhCCEEEE
Confidence            579999996 7999999999999999 888888 4322 111111       123566899999999999999998764

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.04  E-value=0.00057  Score=57.20  Aligned_cols=75  Identities=20%  Similarity=0.189  Sum_probs=50.6

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      .++++++|+|+ |++|+.++..|.+.|..+|+...|+.++.+.+........ .+..+.  .   +++   ..++|+|||
T Consensus       124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~-~~~~~~--~---~~l---~~~aDiIIn  193 (281)
T 3o8q_A          124 LKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG-EVKAQA--F---EQL---KQSYDVIIN  193 (281)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS-CEEEEE--G---GGC---CSCEEEEEE
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC-CeeEee--H---HHh---cCCCCEEEE
Confidence            45789999997 8899999999999997689999998766544332111000 233332  2   111   268999999


Q ss_pred             eccCC
Q 021819           87 VASPC   91 (307)
Q Consensus        87 ~a~~~   91 (307)
                      +.+..
T Consensus       194 aTp~g  198 (281)
T 3o8q_A          194 STSAS  198 (281)
T ss_dssp             CSCCC
T ss_pred             cCcCC
Confidence            97653

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.02  E-value=0.00031  Score=60.29  Aligned_cols=110  Identities=13%  Similarity=0.065  Sum_probs=69.4

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCC----C-CCCceEEEEcccCChhHHHHHhcCccE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPG----A-GDANLRVFEADVLDSGAVSRAVEGCKG   83 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~----~-~~~~~~~i~~D~~d~~~~~~~~~~~d~   83 (307)
                      ++|.|+|| |.+|..++..|...|+.+|++.+++++..+... .+..    . ...++...    +|   . +.++++|+
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t----~d---~-~al~~aD~   85 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE----NN---Y-EYLQNSDV   85 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE----SC---G-GGGTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC----CC---H-HHHCCCCE
Confidence            58999998 999999999999998745999998765443211 0000    0 00022211    22   2 45789999


Q ss_pred             EEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEec
Q 021819           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTS  130 (307)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~iS  130 (307)
                      ||-+++.......  ...+....|......+.+.+.+..-. .++.+|
T Consensus        86 VI~avg~p~k~g~--tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  131 (328)
T 2hjr_A           86 VIITAGVPRKPNM--TRSDLLTVNAKIVGSVAENVGKYCPNAFVICIT  131 (328)
T ss_dssp             EEECCSCCCCTTC--CSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEEcCCCCCCCCC--chhhHHhhhHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9999975432211  22355677888888888888776433 344443

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=97.02  E-value=0.00065  Score=58.82  Aligned_cols=70  Identities=14%  Similarity=0.159  Sum_probs=53.4

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      .+.+|+|+|+ |.+|...++.+...|. +|+++++++.+.+.++++      +...+.   .+.+.+.   +++|+||++
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l------Ga~~v~---~~~~~~~---~~~D~vid~  241 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSM------GVKHFY---TDPKQCK---EELDFIIST  241 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHT------TCSEEE---SSGGGCC---SCEEEEEEC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhc------CCCeec---CCHHHHh---cCCCEEEEC
Confidence            4679999997 9999999999999999 999999988887777665      222222   3444332   289999999


Q ss_pred             ccCC
Q 021819           88 ASPC   91 (307)
Q Consensus        88 a~~~   91 (307)
                      +|..
T Consensus       242 ~g~~  245 (348)
T 3two_A          242 IPTH  245 (348)
T ss_dssp             CCSC
T ss_pred             CCcH
Confidence            8763

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=97.01  E-value=0.0033  Score=55.23  Aligned_cols=70  Identities=16%  Similarity=0.113  Sum_probs=52.3

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      +.+|+|+|+|+ |.+|+.+++.+.+.|+ +|++++..+....  ....     . ..+..|..|.+.+.++++.+|+|..
T Consensus        12 ~~~k~IlIlG~-G~~g~~la~aa~~~G~-~vi~~d~~~~~~~--~~~a-----d-~~~~~~~~d~~~l~~~~~~~dvI~~   81 (389)
T 3q2o_A           12 LPGKTIGIIGG-GQLGRMMALAAKEMGY-KIAVLDPTKNSPC--AQVA-----D-IEIVASYDDLKAIQHLAEISDVVTY   81 (389)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSTTCTT--TTTC-----S-EEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCC-EEEEEeCCCCCch--HHhC-----C-ceEecCcCCHHHHHHHHHhCCEeee
Confidence            45789999995 7899999999999999 8888876542211  1110     1 2455788999999999999998743

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=97.00  E-value=0.00041  Score=59.37  Aligned_cols=74  Identities=11%  Similarity=0.125  Sum_probs=53.7

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      .+.+|+|+||+|.+|...++.+...|. +|+++.+.. +.+.++++      ++..+ .|..+.+.+.+.+.++|+||++
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~~~~-~~~~~~~l------Ga~~~-i~~~~~~~~~~~~~g~D~v~d~  222 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTASKR-NHAFLKAL------GAEQC-INYHEEDFLLAISTPVDAVIDL  222 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEECHH-HHHHHHHH------TCSEE-EETTTSCHHHHCCSCEEEEEES
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeccc-hHHHHHHc------CCCEE-EeCCCcchhhhhccCCCEEEEC
Confidence            467999999999999999999999999 888887543 23344443      22221 3555544466667899999999


Q ss_pred             ccC
Q 021819           88 ASP   90 (307)
Q Consensus        88 a~~   90 (307)
                      +|.
T Consensus       223 ~g~  225 (321)
T 3tqh_A          223 VGG  225 (321)
T ss_dssp             SCH
T ss_pred             CCc
Confidence            774

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=97.00  E-value=0.00038  Score=59.33  Aligned_cols=111  Identities=14%  Similarity=0.045  Sum_probs=70.5

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHC--CCCeEEEEeCCCCCCccccc-CCCC---CCCceEEEEcccCChhHHHHHhcCccE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDN--NYTSINATVFPGSDSSHLFA-LPGA---GDANLRVFEADVLDSGAVSRAVEGCKG   83 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~~~-~~~~---~~~~~~~i~~D~~d~~~~~~~~~~~d~   83 (307)
                      |+|.|+|+ |.+|..++..|..+  |+ +|+++++++...+.... +...   .....++..  .+|.+   + ++++|+
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~-~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~--t~d~~---~-l~~aDv   72 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLAR-ELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG--SNDYA---D-TANSDI   72 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCS-EEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEE--ESCGG---G-GTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCC-EEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEE--CCCHH---H-HCCCCE
Confidence            38999998 99999999999986  56 89999997654432210 0000   000111111  02332   3 689999


Q ss_pred             EEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCC-cEEEEec
Q 021819           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV-RRVVVTS  130 (307)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~iS  130 (307)
                      ||-+++.....  .......+..|......+.+.+.+.+. ..++.+|
T Consensus        73 Viiav~~p~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~t  118 (310)
T 1guz_A           73 VIITAGLPRKP--GMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (310)
T ss_dssp             EEECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             EEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEc
Confidence            99998753321  122456778888888899998887753 3455554

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=97.00  E-value=0.00071  Score=57.80  Aligned_cols=112  Identities=15%  Similarity=0.120  Sum_probs=69.4

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCC-----CCCCceEEEEcccCChhHHHHHhcCcc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPG-----AGDANLRVFEADVLDSGAVSRAVEGCK   82 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~-----~~~~~~~~i~~D~~d~~~~~~~~~~~d   82 (307)
                      +++|.|+|+ |.+|+.++..|+..|+.+|++.+++++..+... .+..     ....++...    +|   . +.++++|
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~d---~-~a~~~aD   74 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT----DD---Y-ADISGSD   74 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE----SC---G-GGGTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC----CC---H-HHhCCCC
Confidence            458999997 999999999999998746999988765433210 0000     000022111    22   2 3578999


Q ss_pred             EEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEecC
Q 021819           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSS  131 (307)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~iSS  131 (307)
                      +||-+++.......  ...+....|....+.+++.+.+..-. .++.+|.
T Consensus        75 iVi~avg~p~~~g~--~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sN  122 (317)
T 2ewd_A           75 VVIITASIPGRPKD--DRSELLFGNARILDSVAEGVKKYCPNAFVICITN  122 (317)
T ss_dssp             EEEECCCCSSCCSS--CGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             EEEEeCCCCCCCCC--cHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence            99999986443221  23355667777777888887766423 3555553

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=96.99  E-value=0.0034  Score=54.31  Aligned_cols=74  Identities=16%  Similarity=-0.014  Sum_probs=52.3

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCC----hhHHHHHh-----
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD----SGAVSRAV-----   78 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d----~~~~~~~~-----   78 (307)
                      .+.+|+|+|+ |.+|...++.+...|. +|+++++++.+.+.++.+      ++..+ .|..+    .+.+.+..     
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l------Ga~~~-~~~~~~~~~~~~i~~~~~~~~g  238 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNC------GADVT-LVVDPAKEEESSIIERIRSAIG  238 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHT------TCSEE-EECCTTTSCHHHHHHHHHHHSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHh------CCCEE-EcCcccccHHHHHHHHhccccC
Confidence            4679999997 9999999999988999 799998877666655554      22211 23332    23454444     


Q ss_pred             cCccEEEEeccC
Q 021819           79 EGCKGVFHVASP   90 (307)
Q Consensus        79 ~~~d~vi~~a~~   90 (307)
                      .++|+||+++|.
T Consensus       239 ~g~D~vid~~g~  250 (352)
T 1e3j_A          239 DLPNVTIDCSGN  250 (352)
T ss_dssp             SCCSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            369999999874

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=96.98  E-value=0.00066  Score=61.12  Aligned_cols=45  Identities=18%  Similarity=0.200  Sum_probs=37.9

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccC
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL   53 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~   53 (307)
                      .+.+|+|+||+|.+|...++.+...|. +|+++++++.+.+.++.+
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga-~vi~~~~~~~~~~~~~~l  272 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGA-NPICVVSSPQKAEICRAM  272 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHhh
Confidence            467999999999999999999999999 888888876666655554

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.98  E-value=0.0014  Score=54.23  Aligned_cols=66  Identities=12%  Similarity=0.054  Sum_probs=49.2

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      +++++|+|+ |+.|+.++..|.+.|. +|++..|+.++.+.+..+      ++...  +..+   +    .++|+|||+.
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~-~v~V~nRt~~ka~~la~~------~~~~~--~~~~---l----~~~DiVInaT  180 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGL-QVSVLNRSSRGLDFFQRL------GCDCF--MEPP---K----SAFDLIINAT  180 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSCTTHHHHHHH------TCEEE--SSCC---S----SCCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHC------CCeEe--cHHH---h----ccCCEEEEcc
Confidence            679999996 9999999999999995 999999988776655422      22322  2222   1    2899999997


Q ss_pred             cCC
Q 021819           89 SPC   91 (307)
Q Consensus        89 ~~~   91 (307)
                      +..
T Consensus       181 p~G  183 (269)
T 3phh_A          181 SAS  183 (269)
T ss_dssp             TTC
T ss_pred             cCC
Confidence            653

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=96.98  E-value=0.0052  Score=51.30  Aligned_cols=73  Identities=22%  Similarity=0.274  Sum_probs=44.4

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHC-CCCeEEEE-eCCCCC--CcccccCCCCCCCceEEEEcccCChhHHHHHhcCccE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDN-NYTSINAT-VFPGSD--SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~-g~~~V~~~-~r~~~~--~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~   83 (307)
                      .+.||.|.|++|-+|+.+++.+.+. +. ++++. +|+++.  ...+..+....       ..++.-.+++.++++++|+
T Consensus        20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~-eLvg~vd~~~~~~~G~d~gel~G~~-------~~gv~v~~dl~~ll~~aDV   91 (288)
T 3ijp_A           20 GSMRLTVVGANGRMGRELITAIQRRKDV-ELCAVLVRKGSSFVDKDASILIGSD-------FLGVRITDDPESAFSNTEG   91 (288)
T ss_dssp             -CEEEEESSTTSHHHHHHHHHHHTCSSE-EEEEEBCCTTCTTTTSBGGGGTTCS-------CCSCBCBSCHHHHTTSCSE
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEecCCccccccchHHhhccC-------cCCceeeCCHHHHhcCCCE
Confidence            3569999999999999999999876 56 66665 444322  11111111100       0122222346667778999


Q ss_pred             EEEec
Q 021819           84 VFHVA   88 (307)
Q Consensus        84 vi~~a   88 (307)
                      ||.+.
T Consensus        92 vIDFT   96 (288)
T 3ijp_A           92 ILDFS   96 (288)
T ss_dssp             EEECS
T ss_pred             EEEcC
Confidence            99874

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=96.97  E-value=0.0018  Score=57.59  Aligned_cols=70  Identities=16%  Similarity=0.133  Sum_probs=53.1

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      ..+++|+|.|+ |.+|+.+++.+.+.|+ +|++++..+....  ...      .-..+..|..|.+.+.++++++|+|+.
T Consensus        33 ~~~~~IlIlG~-G~lg~~~~~aa~~lG~-~v~v~d~~~~~p~--~~~------ad~~~~~~~~d~~~l~~~a~~~D~V~~  102 (419)
T 4e4t_A           33 LPGAWLGMVGG-GQLGRMFCFAAQSMGY-RVAVLDPDPASPA--GAV------ADRHLRAAYDDEAALAELAGLCEAVST  102 (419)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSCTTCHH--HHH------SSEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEECCCCcCch--hhh------CCEEEECCcCCHHHHHHHHhcCCEEEE
Confidence            45789999995 8999999999999999 8888875432211  111      113556889999999999999999883

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=96.97  E-value=0.00039  Score=59.14  Aligned_cols=68  Identities=21%  Similarity=0.207  Sum_probs=48.1

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      ..+++|.|.| .|.+|+.+++.|++.|+ +|++.+|+++..+.+...      ++..       ..+..++++++|+||-
T Consensus         7 ~~~~~IgiIG-~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~------g~~~-------~~~~~e~~~~aDvVi~   71 (306)
T 3l6d_A            7 SFEFDVSVIG-LGAMGTIMAQVLLKQGK-RVAIWNRSPGKAAALVAA------GAHL-------CESVKAALSASPATIF   71 (306)
T ss_dssp             CCSCSEEEEC-CSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHH------TCEE-------CSSHHHHHHHSSEEEE
T ss_pred             cCCCeEEEEC-CCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHC------CCee-------cCCHHHHHhcCCEEEE
Confidence            4467899998 69999999999999999 899999987655444332      2211       1234455667788887


Q ss_pred             ecc
Q 021819           87 VAS   89 (307)
Q Consensus        87 ~a~   89 (307)
                      +..
T Consensus        72 ~vp   74 (306)
T 3l6d_A           72 VLL   74 (306)
T ss_dssp             CCS
T ss_pred             EeC
Confidence            743

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.95  E-value=0.00086  Score=57.50  Aligned_cols=72  Identities=19%  Similarity=0.211  Sum_probs=49.5

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCCh--hHHHHHh-cCccEEEEe
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS--GAVSRAV-EGCKGVFHV   87 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~--~~~~~~~-~~~d~vi~~   87 (307)
                      +|+|+||+|.+|...++.+...|. +|+++++++.+.+.++++      +...+ .|..+.  +.+.++- .++|+||++
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~l------Ga~~~-i~~~~~~~~~~~~~~~~~~d~vid~  223 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVL------GAKEV-LAREDVMAERIRPLDKQRWAAAVDP  223 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHT------TCSEE-EECC---------CCSCCEEEEEEC
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHc------CCcEE-EecCCcHHHHHHHhcCCcccEEEEC
Confidence            799999999999999999999999 899999987776666554      22221 243332  1122221 268999999


Q ss_pred             ccC
Q 021819           88 ASP   90 (307)
Q Consensus        88 a~~   90 (307)
                      +|.
T Consensus       224 ~g~  226 (328)
T 1xa0_A          224 VGG  226 (328)
T ss_dssp             STT
T ss_pred             CcH
Confidence            875

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=96.95  E-value=0.0035  Score=54.32  Aligned_cols=33  Identities=30%  Similarity=0.362  Sum_probs=28.2

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeC
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVF   42 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r   42 (307)
                      ++|.|.||+|++|+.+++.|.+.+..+|+++.+
T Consensus         9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~   41 (354)
T 1ys4_A            9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAA   41 (354)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred             ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEc
Confidence            699999999999999999998775447877764

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.95  E-value=0.00053  Score=60.64  Aligned_cols=72  Identities=18%  Similarity=0.187  Sum_probs=53.0

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccc-ccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL-FALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      ..+++|+|.|+ |.+|+.+++.|...|..+|++.+|+..+.+.+ ..+      +...     .+.+++.+.+.++|+||
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~------g~~~-----~~~~~l~~~l~~aDvVi  232 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL------GGEA-----VRFDELVDHLARSDVVV  232 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH------TCEE-----CCGGGHHHHHHTCSEEE
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc------CCce-----ecHHhHHHHhcCCCEEE
Confidence            46789999997 99999999999999987899999876554222 222      2222     12345667778999999


Q ss_pred             EeccC
Q 021819           86 HVASP   90 (307)
Q Consensus        86 ~~a~~   90 (307)
                      .+.+.
T Consensus       233 ~at~~  237 (404)
T 1gpj_A          233 SATAA  237 (404)
T ss_dssp             ECCSS
T ss_pred             EccCC
Confidence            99764

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.94  E-value=0.0011  Score=57.68  Aligned_cols=74  Identities=12%  Similarity=0.041  Sum_probs=54.6

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      .+.+|+|+|+ |.+|...++.+...|. +|+++++++++.+.+. .+      +...+ .|..+.+.+.++..++|+||+
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~l------Ga~~v-i~~~~~~~~~~~~~g~D~vid  250 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQDL------GADDY-VIGSDQAKMSELADSLDYVID  250 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTTS------CCSCE-EETTCHHHHHHSTTTEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHc------CCcee-eccccHHHHHHhcCCCCEEEE
Confidence            5679999995 9999999999888899 8999998876655544 33      22111 244555666666568999999


Q ss_pred             eccC
Q 021819           87 VASP   90 (307)
Q Consensus        87 ~a~~   90 (307)
                      ++|.
T Consensus       251 ~~g~  254 (357)
T 2cf5_A          251 TVPV  254 (357)
T ss_dssp             CCCS
T ss_pred             CCCC
Confidence            9875

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.92  E-value=0.00037  Score=59.49  Aligned_cols=113  Identities=11%  Similarity=-0.004  Sum_probs=74.6

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCccc----ccCCCCCCCceEEEEcccCChhHHHHHhcCcc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHL----FALPGAGDANLRVFEADVLDSGAVSRAVEGCK   82 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~----~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d   82 (307)
                      ..+||.|+|+ |.+|..++..|+.+|. ++|++++++.+..+..    ........ .......  +|++   + ++++|
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~-~~~i~~t--~d~~---~-~~daD   91 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLH-TAKIVSG--KDYS---V-SAGSK   91 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSC-CSEEEEE--SSSC---S-CSSCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhccc-CCeEEEc--CCHH---H-hCCCC
Confidence            4579999998 9999999999999885 5899988865432211    00000000 1122211  2333   2 78999


Q ss_pred             EEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCC-cEEEEec
Q 021819           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV-RRVVVTS  130 (307)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~iS  130 (307)
                      +||-+||......  ....+.+..|......+.+.+.+++- ..++.+|
T Consensus        92 iVIitaG~p~kpG--~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvt  138 (330)
T 3ldh_A           92 LVVITAGARQQEG--ESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHP  138 (330)
T ss_dssp             EEEECCSCCCCSS--CCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEEEeCCCCCCCC--CCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCC
Confidence            9999998754432  33467889999999999999988753 3455555

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=96.91  E-value=0.0011  Score=57.32  Aligned_cols=75  Identities=11%  Similarity=0.052  Sum_probs=52.8

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCC--hhHHHHHh-cCccEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD--SGAVSRAV-EGCKGV   84 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d--~~~~~~~~-~~~d~v   84 (307)
                      .+.+|+|+||+|.+|...++.+...|. +|+++++++.+.+.++++      +...+ .|..+  .+.+.+.- .++|+|
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l------Ga~~v-i~~~~~~~~~~~~~~~~g~Dvv  221 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKM------GADIV-LNHKESLLNQFKTQGIELVDYV  221 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHHH------TCSEE-ECTTSCHHHHHHHHTCCCEEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc------CCcEE-EECCccHHHHHHHhCCCCccEE
Confidence            578999999999999999999999999 999999877666655554      22221 23222  12233331 268999


Q ss_pred             EEeccC
Q 021819           85 FHVASP   90 (307)
Q Consensus        85 i~~a~~   90 (307)
                      |+++|.
T Consensus       222 ~d~~g~  227 (346)
T 3fbg_A          222 FCTFNT  227 (346)
T ss_dssp             EESSCH
T ss_pred             EECCCc
Confidence            999764

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.90  E-value=0.00094  Score=58.58  Aligned_cols=75  Identities=9%  Similarity=0.052  Sum_probs=51.7

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccC--ChhH----HHHHhc--
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL--DSGA----VSRAVE--   79 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~--d~~~----~~~~~~--   79 (307)
                      .+.+|+|+| +|.+|...++.+...|..+|+++++++.+.+.++++      ++..+ .|..  +.++    +.++..  
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l------Ga~~v-i~~~~~~~~~~~~~v~~~~~g~  266 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI------GADLT-LNRRETSVEERRKAIMDITHGR  266 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT------TCSEE-EETTTSCHHHHHHHHHHHTTTS
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHc------CCcEE-EeccccCcchHHHHHHHHhCCC
Confidence            467999999 899999999999889933899999887766666554      22221 2333  1222    333322  


Q ss_pred             CccEEEEeccC
Q 021819           80 GCKGVFHVASP   90 (307)
Q Consensus        80 ~~d~vi~~a~~   90 (307)
                      ++|+||+++|.
T Consensus       267 g~Dvvid~~g~  277 (380)
T 1vj0_A          267 GADFILEATGD  277 (380)
T ss_dssp             CEEEEEECSSC
T ss_pred             CCcEEEECCCC
Confidence            68999999874

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.90  E-value=0.006  Score=49.81  Aligned_cols=72  Identities=25%  Similarity=0.290  Sum_probs=48.4

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHC-CCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-----CccE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----GCKG   83 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----~~d~   83 (307)
                      ++|.|.|++|.+|+.+++.+.+. ++ ++++........+.+...      +.. +..|.++++...+.+.     ++++
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~-elva~~d~~~dl~~~~~~------~~D-vvIDfT~p~a~~~~~~~a~~~g~~~   72 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDL-TLSAELDAGDPLSLLTDG------NTE-VVIDFTHPDVVMGNLEFLIDNGIHA   72 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTC-EEEEEECTTCCTHHHHHT------TCC-EEEECSCTTTHHHHHHHHHHTTCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEccCCCHHHHhcc------CCc-EEEEccChHHHHHHHHHHHHcCCCE
Confidence            38999999999999999999876 77 777665543332222111      222 3468888877665543     6788


Q ss_pred             EEEecc
Q 021819           84 VFHVAS   89 (307)
Q Consensus        84 vi~~a~   89 (307)
                      |+-..|
T Consensus        73 VigTTG   78 (245)
T 1p9l_A           73 VVGTTG   78 (245)
T ss_dssp             EECCCC
T ss_pred             EEcCCC
Confidence            876654

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=96.89  E-value=0.001  Score=59.68  Aligned_cols=45  Identities=20%  Similarity=0.255  Sum_probs=38.1

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccC
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL   53 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~   53 (307)
                      .+++|+|+||+|.||...++.+...|. +|+++++++.+.+.++++
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga-~vi~~~~~~~~~~~~~~l  264 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGG-IPVAVVSSAQKEAAVRAL  264 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc
Confidence            468999999999999999999999999 888888876666655554

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.88  E-value=0.0053  Score=53.23  Aligned_cols=69  Identities=10%  Similarity=0.037  Sum_probs=48.1

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      +|+|.|.| .|.+|..+++.|++.|+ +|++.+|+++..+.+...      ++.    ...+.+++.+..+.+|+||.+.
T Consensus        22 ~mkIgiIG-lG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~------g~~----~~~s~~e~~~~a~~~DvVi~~v   89 (358)
T 4e21_A           22 SMQIGMIG-LGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALERE------GIA----GARSIEEFCAKLVKPRVVWLMV   89 (358)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT------TCB----CCSSHHHHHHHSCSSCEEEECS
T ss_pred             CCEEEEEC-chHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHC------CCE----EeCCHHHHHhcCCCCCEEEEeC
Confidence            57899998 79999999999999999 999999987665544332      221    1224343333333449999985


Q ss_pred             c
Q 021819           89 S   89 (307)
Q Consensus        89 ~   89 (307)
                      .
T Consensus        90 p   90 (358)
T 4e21_A           90 P   90 (358)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=96.88  E-value=0.0089  Score=51.77  Aligned_cols=93  Identities=24%  Similarity=0.244  Sum_probs=55.2

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCC--CeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNY--TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      ++|.|.||||++|..|++.|.+.++  .++..+..+.+.-+.+. +.     +.....-++. ++    .++++|+||-|
T Consensus         3 ~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~-~~-----~~~~~~~~~~-~~----~~~~~Dvvf~a   71 (366)
T 3pwk_A            3 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLK-FK-----DQDITIEETT-ET----AFEGVDIALFS   71 (366)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEE-ET-----TEEEEEEECC-TT----TTTTCSEEEEC
T ss_pred             cEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcce-ec-----CCCceEeeCC-HH----HhcCCCEEEEC
Confidence            5899999999999999998888754  24444443222211111 10     1111112222 22    24789999998


Q ss_pred             ccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCc
Q 021819           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (307)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~  132 (307)
                      .+..                  .+......+.+.|. ++|=.|+.
T Consensus        72 ~~~~------------------~s~~~a~~~~~~G~-~vIDlSa~   97 (366)
T 3pwk_A           72 AGSS------------------TSAKYAPYAVKAGV-VVVDNTSY   97 (366)
T ss_dssp             SCHH------------------HHHHHHHHHHHTTC-EEEECSST
T ss_pred             CChH------------------hHHHHHHHHHHCCC-EEEEcCCc
Confidence            7531                  24456666667775 57777864

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=96.88  E-value=0.0075  Score=52.38  Aligned_cols=95  Identities=12%  Similarity=0.094  Sum_probs=54.3

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHH-CCC--CeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLD-NNY--TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~-~g~--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      |++|.|.||+|++|+.|++.|++ .++  ..++.+..+. .-.......     +......|..+++.    ++++|+||
T Consensus         1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s-~G~~v~~~~-----g~~i~~~~~~~~~~----~~~~DvVf   70 (367)
T 1t4b_A            1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ-LGQAAPSFG-----GTTGTLQDAFDLEA----LKALDIIV   70 (367)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCCGGG-----TCCCBCEETTCHHH----HHTCSEEE
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCC-CCCCccccC-----CCceEEEecCChHH----hcCCCEEE
Confidence            45899999999999999995555 443  2455554432 111111110     11111223334443    35899999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEecC
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSS  131 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~iSS  131 (307)
                      -|.+.                  ..+......+.+.|.+ .+|=.||
T Consensus        71 ~a~g~------------------~~s~~~a~~~~~~G~k~vVID~ss   99 (367)
T 1t4b_A           71 TCQGG------------------DYTNEIYPKLRESGWQGYWIDAAS   99 (367)
T ss_dssp             ECSCH------------------HHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             ECCCc------------------hhHHHHHHHHHHCCCCEEEEcCCh
Confidence            98763                  2245566777778864 3444444

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=96.86  E-value=0.0052  Score=53.74  Aligned_cols=69  Identities=12%  Similarity=0.106  Sum_probs=52.0

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      ||+|+|+|+ |..|+.+++.|.+.|+ +|+.++.++.....  ..      .-..+..|..|.+.+.+++.++|.|+..
T Consensus         1 M~~Ililg~-g~~g~~~~~a~~~~G~-~v~~~~~~~~~~~~--~~------~~~~~~~~~~d~~~l~~~~~~~d~v~~~   69 (380)
T 3ax6_A            1 MKKIGIIGG-GQLGKMMTLEAKKMGF-YVIVLDPTPRSPAG--QV------ADEQIVAGFFDSERIEDLVKGSDVTTYD   69 (380)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSTTCTTG--GG------SSEEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCCCCchh--hh------CceEEECCCCCHHHHHHHHhcCCEEEec
Confidence            468999996 7899999999999999 88888764332111  11      1135567889999999888899998763

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.85  E-value=0.0015  Score=57.71  Aligned_cols=76  Identities=13%  Similarity=0.053  Sum_probs=54.1

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccC-------------Ch--
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL-------------DS--   71 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~-------------d~--   71 (307)
                      ..+++|+|+|+ |-+|...++.+...|. +|+++++++...+.+..+      +..++..|..             +.  
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga-~V~v~D~~~~~~~~~~~l------Ga~~~~~~~~~~~~~~~g~~~~~~~~~  241 (401)
T 1x13_A          170 VPPAKVMVIGA-GVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSM------GAEFLELDFKEEAGSGDGYAKVMSDAF  241 (401)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSCGGGHHHHHHT------TCEECCC--------CCHHHHHHSHHH
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHc------CCEEEEecccccccccccchhhccHHH
Confidence            45689999996 9999999999999999 899999987665554443      3333322221             11  


Q ss_pred             -----hHHHHHhcCccEEEEeccC
Q 021819           72 -----GAVSRAVEGCKGVFHVASP   90 (307)
Q Consensus        72 -----~~~~~~~~~~d~vi~~a~~   90 (307)
                           +.+.+++.++|+||++++.
T Consensus       242 ~~~~~~~l~e~~~~aDvVI~~~~~  265 (401)
T 1x13_A          242 IKAEMELFAAQAKEVDIIVTTALI  265 (401)
T ss_dssp             HHHHHHHHHHHHHHCSEEEECCCC
T ss_pred             HHHHHHHHHHHhCCCCEEEECCcc
Confidence                 1366777789999999654

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=96.85  E-value=0.00083  Score=60.21  Aligned_cols=80  Identities=11%  Similarity=0.111  Sum_probs=50.3

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCC-CCCceE-EE-----EcccCChhHHHHHhcCcc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA-GDANLR-VF-----EADVLDSGAVSRAVEGCK   82 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~-~i-----~~D~~d~~~~~~~~~~~d   82 (307)
                      |+|.|.| +|++|..++..|.+.|+ +|++++|++.+.+.+..-... ...++. .+     .+.+.-..+..++++++|
T Consensus         3 mkI~VIG-~G~vG~~lA~~La~~G~-~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aD   80 (450)
T 3gg2_A            3 LDIAVVG-IGYVGLVSATCFAELGA-NVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEAD   80 (450)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCS
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCC
Confidence            4899998 59999999999999999 999999987655444331000 000000 00     011111123556678899


Q ss_pred             EEEEeccCC
Q 021819           83 GVFHVASPC   91 (307)
Q Consensus        83 ~vi~~a~~~   91 (307)
                      +||-+.+..
T Consensus        81 vViiaVptp   89 (450)
T 3gg2_A           81 IIFIAVGTP   89 (450)
T ss_dssp             EEEECCCCC
T ss_pred             EEEEEcCCC
Confidence            999997653

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=96.83  E-value=0.0052  Score=45.45  Aligned_cols=87  Identities=17%  Similarity=0.285  Sum_probs=56.5

Q ss_pred             CCcEEEEeCCc---hhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEE
Q 021819            8 EEETVCVTGAN---GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (307)
Q Consensus         8 ~~~~ilItGat---G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~v   84 (307)
                      +.++|.|.|+|   |-+|..+++.|++.|+ +|+.+..+...   ..        ++..+       .++.++.+.+|++
T Consensus        13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~-~V~~vnp~~~~---i~--------G~~~~-------~s~~el~~~vDlv   73 (138)
T 1y81_A           13 EFRKIALVGASKNPAKYGNIILKDLLSKGF-EVLPVNPNYDE---IE--------GLKCY-------RSVRELPKDVDVI   73 (138)
T ss_dssp             -CCEEEEETCCSCTTSHHHHHHHHHHHTTC-EEEEECTTCSE---ET--------TEECB-------SSGGGSCTTCCEE
T ss_pred             CCCeEEEEeecCCCCCHHHHHHHHHHHCCC-EEEEeCCCCCe---EC--------Ceeec-------CCHHHhCCCCCEE
Confidence            35689999997   8999999999999999 88776654211   10        22211       2233344578998


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      +-+...                  .....+++.|.+.|++.++..+|
T Consensus        74 ii~vp~------------------~~v~~v~~~~~~~g~~~i~~~~~  102 (138)
T 1y81_A           74 VFVVPP------------------KVGLQVAKEAVEAGFKKLWFQPG  102 (138)
T ss_dssp             EECSCH------------------HHHHHHHHHHHHTTCCEEEECTT
T ss_pred             EEEeCH------------------HHHHHHHHHHHHcCCCEEEEcCc
Confidence            887432                  11344566677788887777654

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.83  E-value=0.0025  Score=57.31  Aligned_cols=100  Identities=21%  Similarity=0.280  Sum_probs=72.0

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHH-hcCccEEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFH   86 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~d~vi~   86 (307)
                      ..++|+|.|| |-+|..|++.| ++++ +|..+.+++...+.+....+    +..++.+|.+|++-+.+. ++++|+++-
T Consensus       234 ~~~~v~I~Gg-G~ig~~lA~~L-~~~~-~v~iIE~d~~r~~~la~~l~----~~~Vi~GD~td~~~L~ee~i~~~D~~ia  306 (461)
T 4g65_A          234 PYRRIMIVGG-GNIGASLAKRL-EQTY-SVKLIERNLQRAEKLSEELE----NTIVFCGDAADQELLTEENIDQVDVFIA  306 (461)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHH-TTTS-EEEEEESCHHHHHHHHHHCT----TSEEEESCTTCHHHHHHTTGGGCSEEEE
T ss_pred             cccEEEEEcc-hHHHHHHHHHh-hhcC-ceEEEecCHHHHHHHHHHCC----CceEEeccccchhhHhhcCchhhcEEEE
Confidence            3578999996 89999999997 4567 89888887777666554322    578999999999988765 678999987


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      +.+-        +     +.|+..+    ..|++.|+++.|-.-.
T Consensus       307 ~T~~--------D-----e~Ni~~~----llAk~~gv~kvIa~vn  334 (461)
T 4g65_A          307 LTNE--------D-----ETNIMSA----MLAKRMGAKKVMVLIQ  334 (461)
T ss_dssp             CCSC--------H-----HHHHHHH----HHHHHTTCSEEEEECS
T ss_pred             cccC--------c-----HHHHHHH----HHHHHcCCcccccccc
Confidence            6332        1     3444443    3356778887766543

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=96.81  E-value=0.0016  Score=56.33  Aligned_cols=98  Identities=15%  Similarity=0.106  Sum_probs=57.0

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEe-CCCCCCcccccCCCCC--------CCceEEEEcccCChhHHHHHhc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATV-FPGSDSSHLFALPGAG--------DANLRVFEADVLDSGAVSRAVE   79 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~-r~~~~~~~~~~~~~~~--------~~~~~~i~~D~~d~~~~~~~~~   79 (307)
                      |++|.|.||+|++|+.+++.|.+....+|+++. .+......+.......        ...+.+  .|. |++.    ++
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~-d~~~----~~   76 (350)
T 2ep5_A            4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPI--VST-NYED----HK   76 (350)
T ss_dssp             CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBE--ECS-SGGG----GT
T ss_pred             CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEE--eeC-CHHH----hc
Confidence            469999999999999999999876544777775 2111111111100000        001111  222 3332    36


Q ss_pred             CccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCc
Q 021819           80 GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~  132 (307)
                      ++|+||-|.+..                  .+..+++.+.+.|. ++|-.|+.
T Consensus        77 ~vDvVf~atp~~------------------~s~~~a~~~~~aG~-~VId~s~~  110 (350)
T 2ep5_A           77 DVDVVLSALPNE------------------LAESIELELVKNGK-IVVSNASP  110 (350)
T ss_dssp             TCSEEEECCCHH------------------HHHHHHHHHHHTTC-EEEECSST
T ss_pred             CCCEEEECCChH------------------HHHHHHHHHHHCCC-EEEECCcc
Confidence            899999875431                  24557777778885 47777753

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=96.80  E-value=0.0031  Score=54.70  Aligned_cols=75  Identities=12%  Similarity=0.051  Sum_probs=51.3

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccC--C-hhHHHHHh----cC
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL--D-SGAVSRAV----EG   80 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~--d-~~~~~~~~----~~   80 (307)
                      .+.+|+|+|+ |.+|...++.+...|..+|+++++++.+.+.++++      ++..+ .|..  + .+..+++.    .+
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l------Ga~~v-i~~~~~~~~~~~~~i~~~~~~g  242 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEI------GADLV-LQISKESPQEIARKVEGQLGCK  242 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT------TCSEE-EECSSCCHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh------CCCEE-EcCcccccchHHHHHHHHhCCC
Confidence            4679999996 99999999988888986799998877665555554      22211 2333  2 22222222    36


Q ss_pred             ccEEEEeccC
Q 021819           81 CKGVFHVASP   90 (307)
Q Consensus        81 ~d~vi~~a~~   90 (307)
                      +|+||+++|.
T Consensus       243 ~D~vid~~g~  252 (356)
T 1pl8_A          243 PEVTIECTGA  252 (356)
T ss_dssp             CSEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.80  E-value=0.0022  Score=54.17  Aligned_cols=35  Identities=17%  Similarity=0.295  Sum_probs=31.5

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (307)
                      +++|.|.||+|.+|..+++.|.+.|+ +|++.+|++
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~-~V~~~~~~~   55 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGY-PISILDRED   55 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTTC
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCC-eEEEEECCc
Confidence            45899999999999999999999999 899888764

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.80  E-value=0.0031  Score=53.48  Aligned_cols=111  Identities=15%  Similarity=0.125  Sum_probs=65.3

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCccc-ccCCCCC--CCceEEEEcccCChhHHHHHhcCccEEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHL-FALPGAG--DANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~-~~~~~~~--~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      |||.|+|+ |.+|..++..|..+|+ .+|+++++++...+.. ..+....  ....++..   .+.    +.++++|+||
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~----~a~~~aDvVI   72 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGH----SELADAQVVI   72 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECG----GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCH----HHhCCCCEEE
Confidence            38999998 9999999999999885 4799998865432211 1111000  00222221   232    3578999999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEec
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTS  130 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~iS  130 (307)
                      .+++......  ....+.+..|....+.+++.+.+.+.. .++.+|
T Consensus        73 i~~~~~~~~g--~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~t  116 (304)
T 2v6b_A           73 LTAGANQKPG--ESRLDLLEKNADIFRELVPQITRAAPDAVLLVTS  116 (304)
T ss_dssp             ECC--------------CHHHHHHHHHHHHHHHHHHCSSSEEEECS
T ss_pred             EcCCCCCCCC--CcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            9997543211  223456788888889999988876533 444433

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=96.79  E-value=0.00098  Score=56.41  Aligned_cols=42  Identities=24%  Similarity=0.336  Sum_probs=36.6

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA   52 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~   52 (307)
                      |++|-++| .|.+|+.+++.|++.|+ +|++.+|++++.+.+..
T Consensus         3 M~kIgfIG-lG~MG~~mA~~L~~~G~-~v~v~dr~~~~~~~l~~   44 (300)
T 3obb_A            3 MKQIAFIG-LGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVA   44 (300)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHH
T ss_pred             cCEEEEee-ehHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHH
Confidence            67999999 69999999999999999 99999998776655543

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.78  E-value=0.00079  Score=56.60  Aligned_cols=66  Identities=15%  Similarity=0.222  Sum_probs=46.4

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      |++|.|.| .|.+|+.+++.|.+.|+ +|++.+|+++..+.+...      ++..       ..+..++++++|+||-+.
T Consensus         1 M~~I~iiG-~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~------g~~~-------~~~~~~~~~~advvi~~v   65 (287)
T 3pdu_A            1 MTTYGFLG-LGIMGGPMAANLVRAGF-DVTVWNRNPAKCAPLVAL------GARQ-------ASSPAEVCAACDITIAML   65 (287)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHHHHTC-CEEEECSSGGGGHHHHHH------TCEE-------CSCHHHHHHHCSEEEECC
T ss_pred             CCeEEEEc-cCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHC------CCee-------cCCHHHHHHcCCEEEEEc
Confidence            45899998 79999999999999999 899999987766554332      2211       112344556677777764


Q ss_pred             c
Q 021819           89 S   89 (307)
Q Consensus        89 ~   89 (307)
                      .
T Consensus        66 ~   66 (287)
T 3pdu_A           66 A   66 (287)
T ss_dssp             S
T ss_pred             C
Confidence            3

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.78  E-value=0.0017  Score=54.83  Aligned_cols=65  Identities=8%  Similarity=0.026  Sum_probs=48.0

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      +++|.|.| .|.+|..+++.|.+.|+ +|++.+|+++..+.+...      ++..       ..+..++++ +|+||.+.
T Consensus        15 ~~~I~vIG-~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~------g~~~-------~~~~~~~~~-aDvvi~~v   78 (296)
T 3qha_A           15 QLKLGYIG-LGNMGAPMATRMTEWPG-GVTVYDIRIEAMTPLAEA------GATL-------ADSVADVAA-ADLIHITV   78 (296)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHTTSTT-CEEEECSSTTTSHHHHHT------TCEE-------CSSHHHHTT-SSEEEECC
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHC------CCEE-------cCCHHHHHh-CCEEEEEC
Confidence            35899998 69999999999999999 999999988776665442      2221       123445566 88888775


Q ss_pred             c
Q 021819           89 S   89 (307)
Q Consensus        89 ~   89 (307)
                      .
T Consensus        79 p   79 (296)
T 3qha_A           79 L   79 (296)
T ss_dssp             S
T ss_pred             C
Confidence            3

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=96.78  E-value=0.00057  Score=55.12  Aligned_cols=67  Identities=13%  Similarity=0.060  Sum_probs=46.3

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEE-EeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINA-TVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      ||+|.|.| +|.+|+.+++.|.+.|+ +|++ .+|+++..+.+....     ++....   .+.    +.++++|+||.+
T Consensus        23 mmkI~IIG-~G~mG~~la~~l~~~g~-~V~~v~~r~~~~~~~l~~~~-----g~~~~~---~~~----~~~~~aDvVila   88 (220)
T 4huj_A           23 MTTYAIIG-AGAIGSALAERFTAAQI-PAIIANSRGPASLSSVTDRF-----GASVKA---VEL----KDALQADVVILA   88 (220)
T ss_dssp             SCCEEEEE-CHHHHHHHHHHHHHTTC-CEEEECTTCGGGGHHHHHHH-----TTTEEE---CCH----HHHTTSSEEEEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCC-EEEEEECCCHHHHHHHHHHh-----CCCccc---ChH----HHHhcCCEEEEe
Confidence            67999999 79999999999999999 7887 788766554433210     111111   122    236789999998


Q ss_pred             cc
Q 021819           88 AS   89 (307)
Q Consensus        88 a~   89 (307)
                      ..
T Consensus        89 vp   90 (220)
T 4huj_A           89 VP   90 (220)
T ss_dssp             SC
T ss_pred             CC
Confidence            53

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.77  E-value=0.0022  Score=54.47  Aligned_cols=111  Identities=14%  Similarity=0.100  Sum_probs=72.7

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcc-cccCCCCC--CCceEEEEcccCChhHHHHHhcCccEEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH-LFALPGAG--DANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~-~~~~~~~~--~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      +||.|+|+ |.+|..++..|+.++. .+|..++++..+.+. ...+....  ...+++.. +  +.    +.++++|+||
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~----~a~~~aD~Vi   72 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SY----GDLEGARAVV   72 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CG----GGGTTEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CH----HHhCCCCEEE
Confidence            48999998 9999999999998873 489999886543321 11110000  00233322 2  32    3478999999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCC-cEEEEec
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV-RRVVVTS  130 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~iS  130 (307)
                      ..++......  .........|......+.+.+.+.+- ..++.+|
T Consensus        73 i~ag~~~~~g--~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  116 (310)
T 2xxj_A           73 LAAGVAQRPG--ETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVAT  116 (310)
T ss_dssp             ECCCCCCCTT--CCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             ECCCCCCCCC--cCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            9998754322  23456788999999999999988753 3455553

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=96.76  E-value=0.0014  Score=58.64  Aligned_cols=78  Identities=10%  Similarity=0.143  Sum_probs=48.4

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCC-CCCceE-EE-----EcccCChhHHHHHhcCccE
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA-GDANLR-VF-----EADVLDSGAVSRAVEGCKG   83 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~-~i-----~~D~~d~~~~~~~~~~~d~   83 (307)
                      +|.|.| +|++|..++..|.+.|+ +|++++|++++.+.+..-... ...+.. .+     .+.+.-..+..++++++|+
T Consensus         2 kI~VIG-~G~vG~~~A~~la~~G~-~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDv   79 (436)
T 1mv8_A            2 RISIFG-LGYVGAVCAGCLSARGH-EVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV   79 (436)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCE
Confidence            789998 79999999999999999 999999976554443321000 000000 00     0011111234456778999


Q ss_pred             EEEeccC
Q 021819           84 VFHVASP   90 (307)
Q Consensus        84 vi~~a~~   90 (307)
                      ||-+.+.
T Consensus        80 viiaVpt   86 (436)
T 1mv8_A           80 SFICVGT   86 (436)
T ss_dssp             EEECCCC
T ss_pred             EEEEcCC
Confidence            9999764

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=96.76  E-value=0.001  Score=56.73  Aligned_cols=73  Identities=12%  Similarity=0.111  Sum_probs=46.8

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC--CCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCc
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG--SDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGC   81 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~   81 (307)
                      |++..|++|.|.| +|.+|..+++.|.+.|+.+|++.+|++  ...+.+...      ++..    .   .+..++++++
T Consensus        19 ~~~~~~~~I~iIG-~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~------g~~~----~---~~~~e~~~~a   84 (312)
T 3qsg_A           19 YFQSNAMKLGFIG-FGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEEL------GVSC----K---ASVAEVAGEC   84 (312)
T ss_dssp             ------CEEEEEC-CSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHT------TCEE----C---SCHHHHHHHC
T ss_pred             cccCCCCEEEEEC-ccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHC------CCEE----e---CCHHHHHhcC
Confidence            4444578999998 599999999999999976899998863  333333222      2221    1   1344566778


Q ss_pred             cEEEEeccC
Q 021819           82 KGVFHVASP   90 (307)
Q Consensus        82 d~vi~~a~~   90 (307)
                      |+||-+...
T Consensus        85 DvVi~~vp~   93 (312)
T 3qsg_A           85 DVIFSLVTA   93 (312)
T ss_dssp             SEEEECSCT
T ss_pred             CEEEEecCc
Confidence            999888544

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.75  E-value=0.0058  Score=52.23  Aligned_cols=36  Identities=19%  Similarity=0.285  Sum_probs=31.8

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (307)
                      +.++|+|.|+ |++|+++++.|...|..+++.+++..
T Consensus        33 ~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~   68 (340)
T 3rui_A           33 KNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGT   68 (340)
T ss_dssp             HTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred             hCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCE
Confidence            4679999995 99999999999999998899888754

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.72  E-value=0.0014  Score=56.83  Aligned_cols=72  Identities=14%  Similarity=0.117  Sum_probs=51.7

Q ss_pred             cEEEEeCCchhhHHHH-HHHH-HHCCCCeEEEEeCCCC---CCcccccCCCCCCCceEEEEcccCChh--HHHHHhcCcc
Q 021819           10 ETVCVTGANGFIGTWL-VKTL-LDNNYTSINATVFPGS---DSSHLFALPGAGDANLRVFEADVLDSG--AVSRAVEGCK   82 (307)
Q Consensus        10 ~~ilItGatG~iG~~l-~~~L-~~~g~~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~i~~D~~d~~--~~~~~~~~~d   82 (307)
                      .+|+|+|+ |.+|... ++.+ ...|..+|++++++++   +.+.++++      ++..+  |..+.+  ++.++-.++|
T Consensus       174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~l------Ga~~v--~~~~~~~~~i~~~~gg~D  244 (357)
T 2b5w_A          174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEEL------DATYV--DSRQTPVEDVPDVYEQMD  244 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHT------TCEEE--ETTTSCGGGHHHHSCCEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHc------CCccc--CCCccCHHHHHHhCCCCC
Confidence            79999999 9999999 8887 7779844999999877   66666555      45544  554322  2444412689


Q ss_pred             EEEEeccC
Q 021819           83 GVFHVASP   90 (307)
Q Consensus        83 ~vi~~a~~   90 (307)
                      +||+++|.
T Consensus       245 vvid~~g~  252 (357)
T 2b5w_A          245 FIYEATGF  252 (357)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCC
Confidence            99999874

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.72  E-value=0.0018  Score=54.44  Aligned_cols=65  Identities=20%  Similarity=0.293  Sum_probs=46.8

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEecc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a~   89 (307)
                      |+|.|.| +|.+|+.+++.|.+.|+ +|++.+|+++..+.+...      ++..       ..+..++++++|+||-+..
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~------g~~~-------~~~~~~~~~~aDvvi~~vp   66 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGC-SVTIWNRSPEKAEELAAL------GAER-------AATPCEVVESCPVTFAMLA   66 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHT------TCEE-------CSSHHHHHHHCSEEEECCS
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHC------CCee-------cCCHHHHHhcCCEEEEEcC
Confidence            4899998 59999999999999999 999999987766555432      2221       1234455666787777643

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=96.70  E-value=0.0042  Score=52.75  Aligned_cols=113  Identities=14%  Similarity=0.070  Sum_probs=68.5

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCccccc-CC---CCCCCceEEEEcccCChhHHHHHhcCccEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFA-LP---GAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~-~~---~~~~~~~~~i~~D~~d~~~~~~~~~~~d~v   84 (307)
                      |+|.|+| +|.+|..++..|.++|. ++|++++|+++..+.+.. +.   ......+....   +|.    +.++++|+|
T Consensus         2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~d~----~~~~~aDvV   73 (309)
T 1hyh_A            2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI---NDW----AALADADVV   73 (309)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE---SCG----GGGTTCSEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEe---CCH----HHhCCCCEE
Confidence            5899999 79999999999999982 389999997544332221 00   00000222222   232    356899999


Q ss_pred             EEeccCCCCC--CCCChhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEec
Q 021819           85 FHVASPCTLE--DPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTS  130 (307)
Q Consensus        85 i~~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~iS  130 (307)
                      |-+++.....  ............|......+++.+.+.... .+|.+|
T Consensus        74 iiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~t  122 (309)
T 1hyh_A           74 ISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (309)
T ss_dssp             EECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence            9998763310  001123456778888888888888776433 444433

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.69  E-value=0.0016  Score=56.58  Aligned_cols=74  Identities=15%  Similarity=0.077  Sum_probs=53.4

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHC-CCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCCh--hHHHHHhc--Ccc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS--GAVSRAVE--GCK   82 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~--~~~~~~~~--~~d   82 (307)
                      .+.+|+|+|+ |.+|...++.+... |. +|+++++++++.+.++++      +...+ .|..+.  +.+.++-.  ++|
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga-~Vi~~~~~~~~~~~~~~l------Ga~~v-i~~~~~~~~~v~~~~~g~g~D  256 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPA-TVIALDVKEEKLKLAERL------GADHV-VDARRDPVKQVMELTRGRGVN  256 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCC-EEEEEESSHHHHHHHHHT------TCSEE-EETTSCHHHHHHHHTTTCCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHHh------CCCEE-EeccchHHHHHHHHhCCCCCc
Confidence            4679999999 89999999998888 99 899999887666666554      22222 244443  33444432  689


Q ss_pred             EEEEeccC
Q 021819           83 GVFHVASP   90 (307)
Q Consensus        83 ~vi~~a~~   90 (307)
                      +||+++|.
T Consensus       257 vvid~~G~  264 (359)
T 1h2b_A          257 VAMDFVGS  264 (359)
T ss_dssp             EEEESSCC
T ss_pred             EEEECCCC
Confidence            99999875

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.68  E-value=0.0032  Score=54.94  Aligned_cols=75  Identities=12%  Similarity=0.008  Sum_probs=51.8

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChh---HHHHHhc-Ccc
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AVSRAVE-GCK   82 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~---~~~~~~~-~~d   82 (307)
                      ..+.+|+|+||+|.+|...++.+...|. +|+++. ++.+.+.++++      ++..+ .|..+.+   .+.++.. ++|
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~~~~~~l------Ga~~v-i~~~~~~~~~~v~~~t~g~~d  233 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNFDLAKSR------GAEEV-FDYRAPNLAQTIRTYTKNNLR  233 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHT------TCSEE-EETTSTTHHHHHHHHTTTCCC
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHHHHHHHc------CCcEE-EECCCchHHHHHHHHccCCcc
Confidence            4567999999999999999999999999 888886 45555555554      22221 2444433   2333322 589


Q ss_pred             EEEEeccC
Q 021819           83 GVFHVASP   90 (307)
Q Consensus        83 ~vi~~a~~   90 (307)
                      +||.++|.
T Consensus       234 ~v~d~~g~  241 (371)
T 3gqv_A          234 YALDCITN  241 (371)
T ss_dssp             EEEESSCS
T ss_pred             EEEECCCc
Confidence            99999875

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=96.67  E-value=0.0027  Score=55.23  Aligned_cols=78  Identities=10%  Similarity=0.057  Sum_probs=53.8

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHh------cCc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV------EGC   81 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~------~~~   81 (307)
                      .+.+|+|+|+ |.+|...++.+...|...|+++++++.+.+.++++ ..   .+..+..|-.+.+++.+.+      .++
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~---~~~~~~~~~~~~~~~~~~v~~~t~g~g~  253 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CP---EVVTHKVERLSAEESAKKIVESFGGIEP  253 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CT---TCEEEECCSCCHHHHHHHHHHHTSSCCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-ch---hcccccccccchHHHHHHHHHHhCCCCC
Confidence            4679999998 99999999999999994599998887776666554 21   2222333433444443333      268


Q ss_pred             cEEEEeccC
Q 021819           82 KGVFHVASP   90 (307)
Q Consensus        82 d~vi~~a~~   90 (307)
                      |+||.++|.
T Consensus       254 Dvvid~~g~  262 (363)
T 3m6i_A          254 AVALECTGV  262 (363)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999874

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.67  E-value=0.00084  Score=56.10  Aligned_cols=71  Identities=14%  Similarity=0.128  Sum_probs=50.7

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      .++++++|.|+ |.+|+.+++.|.+.|. +|++.+|+.++.+.+....     ++.     +.+  ++.+.++++|+||+
T Consensus       127 ~~~~~v~iiGa-G~~g~aia~~L~~~g~-~V~v~~r~~~~~~~l~~~~-----g~~-----~~~--~~~~~~~~aDiVi~  192 (275)
T 2hk9_A          127 VKEKSILVLGA-GGASRAVIYALVKEGA-KVFLWNRTKEKAIKLAQKF-----PLE-----VVN--SPEEVIDKVQVIVN  192 (275)
T ss_dssp             GGGSEEEEECC-SHHHHHHHHHHHHHTC-EEEEECSSHHHHHHHTTTS-----CEE-----ECS--CGGGTGGGCSEEEE
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHc-----CCe-----eeh--hHHhhhcCCCEEEE
Confidence            34679999995 8999999999999999 9999998765544433211     222     111  23446678999999


Q ss_pred             eccCC
Q 021819           87 VASPC   91 (307)
Q Consensus        87 ~a~~~   91 (307)
                      +.+..
T Consensus       193 atp~~  197 (275)
T 2hk9_A          193 TTSVG  197 (275)
T ss_dssp             CSSTT
T ss_pred             eCCCC
Confidence            98754

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}

Probab=96.66  E-value=0.0062  Score=51.91  Aligned_cols=69  Identities=14%  Similarity=0.173  Sum_probs=52.4

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      ++.++++.|.| .|-||+.+++.|..-|+ +|++.+|++.......        .  .     ....++.++++++|+|+
T Consensus       137 ~l~g~tvGIIG-lG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~--------~--~-----~~~~~l~ell~~aDvV~  199 (324)
T 3hg7_A          137 GLKGRTLLILG-TGSIGQHIAHTGKHFGM-KVLGVSRSGRERAGFD--------Q--V-----YQLPALNKMLAQADVIV  199 (324)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTC-EEEEECSSCCCCTTCS--------E--E-----ECGGGHHHHHHTCSEEE
T ss_pred             ccccceEEEEE-ECHHHHHHHHHHHhCCC-EEEEEcCChHHhhhhh--------c--c-----cccCCHHHHHhhCCEEE
Confidence            45688999999 69999999999999999 9999998763322110        1  1     12456888999999999


Q ss_pred             EeccCC
Q 021819           86 HVASPC   91 (307)
Q Consensus        86 ~~a~~~   91 (307)
                      .+....
T Consensus       200 l~lPlt  205 (324)
T 3hg7_A          200 SVLPAT  205 (324)
T ss_dssp             ECCCCC
T ss_pred             EeCCCC
Confidence            987643

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=96.65  E-value=0.011  Score=50.06  Aligned_cols=111  Identities=13%  Similarity=0.111  Sum_probs=69.4

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      +++||.|+|| |.+|..++..|+.+|. .+|+..++++........+......++.. .   +|   . +.++++|+||.
T Consensus        13 ~~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~-t---~d---~-~~l~~aD~Vi~   83 (303)
T 2i6t_A           13 TVNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEI-S---KD---L-SASAHSKVVIF   83 (303)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEE-E---SC---G-GGGTTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEE-e---CC---H-HHHCCCCEEEE
Confidence            4679999996 9999999999998875 47888888653211111110001113333 1   23   2 34789999999


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEec
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTS  130 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~iS  130 (307)
                      ++|....   -.........|....+.+++.+.+..-. .++.+|
T Consensus        84 aag~~~p---G~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~s  125 (303)
T 2i6t_A           84 TVNSLGS---SQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVAS  125 (303)
T ss_dssp             CCCC-------CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECS
T ss_pred             cCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcC
Confidence            9987422   2345677888988899999998886533 444544

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.65  E-value=0.0028  Score=56.86  Aligned_cols=79  Identities=13%  Similarity=0.008  Sum_probs=54.5

Q ss_pred             CccccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC-C---cccccCCCCCCCceEEEEcccCChhHHHH
Q 021819            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-S---SHLFALPGAGDANLRVFEADVLDSGAVSR   76 (307)
Q Consensus         1 m~~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~---~~~~~~~~~~~~~~~~i~~D~~d~~~~~~   76 (307)
                      |..++++++|+|+|.|. |..|..+++.|.++|+ +|.+.+++... .   +.+...      ++.+..+.-  ++   +
T Consensus         1 m~~~~~~~~k~v~viG~-G~sG~s~A~~l~~~G~-~V~~~D~~~~~~~~~~~~L~~~------gi~~~~g~~--~~---~   67 (451)
T 3lk7_A            1 MKTITTFENKKVLVLGL-ARSGEAAARLLAKLGA-IVTVNDGKPFDENPTAQSLLEE------GIKVVCGSH--PL---E   67 (451)
T ss_dssp             ---CCTTTTCEEEEECC-TTTHHHHHHHHHHTTC-EEEEEESSCGGGCHHHHHHHHT------TCEEEESCC--CG---G
T ss_pred             CcchhhcCCCEEEEEee-CHHHHHHHHHHHhCCC-EEEEEeCCcccCChHHHHHHhC------CCEEEECCC--hH---H
Confidence            55566677899999998 8899999999999999 99999986532 1   122222      566665542  22   2


Q ss_pred             HhcC-ccEEEEeccCCC
Q 021819           77 AVEG-CKGVFHVASPCT   92 (307)
Q Consensus        77 ~~~~-~d~vi~~a~~~~   92 (307)
                      .+++ +|.||...|+..
T Consensus        68 ~~~~~~d~vv~spgi~~   84 (451)
T 3lk7_A           68 LLDEDFCYMIKNPGIPY   84 (451)
T ss_dssp             GGGSCEEEEEECTTSCT
T ss_pred             hhcCCCCEEEECCcCCC
Confidence            3455 899999887743

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.65  E-value=0.0054  Score=51.98  Aligned_cols=81  Identities=10%  Similarity=-0.000  Sum_probs=55.8

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCCCCCceE-EEEcccCChhHHHHHhcCccE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLR-VFEADVLDSGAVSRAVEGCKG   83 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~-~i~~D~~d~~~~~~~~~~~d~   83 (307)
                      +..+++++|.|++.-+|+.+++.|+..|. .|+..+|+........ .+..    ..+ ......++++++.+.+.++|+
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gA-tVtv~nR~~~~l~~ra~~la~----~~~~~t~~~~t~~~~L~e~l~~ADI  248 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGA-TVYSVDVNNIQKFTRGESLKL----NKHHVEDLGEYSEDLLKKCSLDSDV  248 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSC-EEEEECSSEEEEEESCCCSSC----CCCEEEEEEECCHHHHHHHHHHCSE
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCC-EEEEEeCchHHHHhHHHHHhh----hcccccccccccHhHHHHHhccCCE
Confidence            45689999999988899999999999998 8998887633222111 1110    111 111111345789999999999


Q ss_pred             EEEeccCC
Q 021819           84 VFHVASPC   91 (307)
Q Consensus        84 vi~~a~~~   91 (307)
                      ||.+.+..
T Consensus       249 VIsAtg~p  256 (320)
T 1edz_A          249 VITGVPSE  256 (320)
T ss_dssp             EEECCCCT
T ss_pred             EEECCCCC
Confidence            99998763

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=96.65  E-value=0.0044  Score=52.70  Aligned_cols=68  Identities=10%  Similarity=0.199  Sum_probs=52.2

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      +..+|+|.|.| .|.||+.+++.|...|+ +|++.+|++...+           .+....    ..+++.++++++|+|+
T Consensus       136 ~l~g~tvGIiG-~G~IG~~vA~~l~~~G~-~V~~~dr~~~~~~-----------~~~~~~----~~~~l~ell~~aDiV~  198 (315)
T 3pp8_A          136 TREEFSVGIMG-AGVLGAKVAESLQAWGF-PLRCWSRSRKSWP-----------GVESYV----GREELRAFLNQTRVLI  198 (315)
T ss_dssp             CSTTCCEEEEC-CSHHHHHHHHHHHTTTC-CEEEEESSCCCCT-----------TCEEEE----SHHHHHHHHHTCSEEE
T ss_pred             CcCCCEEEEEe-eCHHHHHHHHHHHHCCC-EEEEEcCCchhhh-----------hhhhhc----ccCCHHHHHhhCCEEE
Confidence            35678999999 59999999999999999 9999998765332           222211    2367888999999999


Q ss_pred             EeccC
Q 021819           86 HVASP   90 (307)
Q Consensus        86 ~~a~~   90 (307)
                      .+...
T Consensus       199 l~~Pl  203 (315)
T 3pp8_A          199 NLLPN  203 (315)
T ss_dssp             ECCCC
T ss_pred             EecCC
Confidence            88654

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.64  E-value=0.0018  Score=56.61  Aligned_cols=75  Identities=17%  Similarity=0.136  Sum_probs=52.4

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------C
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------G   80 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~   80 (307)
                      .+.+|+|+|+ |.+|...++.+...|..+|+++++++.+.+.++.+      ++..+ .|..+.+..+.+.+       +
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l------Ga~~v-i~~~~~~~~~~i~~~~~~~~gg  253 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV------GATAT-VDPSAGDVVEAIAGPVGLVPGG  253 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH------TCSEE-ECTTSSCHHHHHHSTTSSSTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc------CCCEE-ECCCCcCHHHHHHhhhhccCCC
Confidence            4679999998 99999999999999987788888876665555544      22222 34444433333332       5


Q ss_pred             ccEEEEeccC
Q 021819           81 CKGVFHVASP   90 (307)
Q Consensus        81 ~d~vi~~a~~   90 (307)
                      +|+||+++|.
T Consensus       254 ~Dvvid~~G~  263 (370)
T 4ej6_A          254 VDVVIECAGV  263 (370)
T ss_dssp             EEEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            8999999764

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.63  E-value=0.00034  Score=58.74  Aligned_cols=38  Identities=16%  Similarity=0.212  Sum_probs=32.9

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS   48 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~   48 (307)
                      +++|.|.|+ |.+|+.+++.|++.|+ +|++.+|+++..+
T Consensus         4 ~~kV~VIGa-G~mG~~iA~~la~~G~-~V~l~d~~~~~~~   41 (283)
T 4e12_A            4 ITNVTVLGT-GVLGSQIAFQTAFHGF-AVTAYDINTDALD   41 (283)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-eEEEEeCCHHHHH
Confidence            568999985 9999999999999999 9999999765543

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=96.62  E-value=0.0022  Score=52.30  Aligned_cols=34  Identities=9%  Similarity=0.076  Sum_probs=28.7

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEE-EeCCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINA-TVFPG   44 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~-~~r~~   44 (307)
                      |+||.|+|+ |.+|+.+++.+.+.+. ++++ ++|++
T Consensus         3 MmkI~ViGa-GrMG~~i~~~l~~~~~-eLva~~d~~~   37 (243)
T 3qy9_A            3 SMKILLIGY-GAMNQRVARLAEEKGH-EIVGVIENTP   37 (243)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEECSSC
T ss_pred             ceEEEEECc-CHHHHHHHHHHHhCCC-EEEEEEecCc
Confidence            569999999 9999999999999988 7776 45543

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=96.61  E-value=0.002  Score=55.48  Aligned_cols=74  Identities=18%  Similarity=0.222  Sum_probs=52.7

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhH---HHHHhcCccEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA---VSRAVEGCKGV   84 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~---~~~~~~~~d~v   84 (307)
                      .+.+|+|+|+ |.+|...++.+...|. +|+++++++++.+.++++      +...+ .|..+.+.   +.+...++|.|
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l------Ga~~~-i~~~~~~~~~~~~~~~g~~d~v  236 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRL------GAEVA-VNARDTDPAAWLQKEIGGAHGV  236 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHT------TCSEE-EETTTSCHHHHHHHHHSSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHc------CCCEE-EeCCCcCHHHHHHHhCCCCCEE
Confidence            4679999997 8899999999999999 999999987777666665      22222 24444332   22222378999


Q ss_pred             EEeccC
Q 021819           85 FHVASP   90 (307)
Q Consensus        85 i~~a~~   90 (307)
                      |.+++.
T Consensus       237 id~~g~  242 (340)
T 3s2e_A          237 LVTAVS  242 (340)
T ss_dssp             EESSCC
T ss_pred             EEeCCC
Confidence            998763

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.60  E-value=0.0037  Score=55.13  Aligned_cols=74  Identities=9%  Similarity=0.019  Sum_probs=53.8

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCC----hhHHHHHhc--Cc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD----SGAVSRAVE--GC   81 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d----~~~~~~~~~--~~   81 (307)
                      .+.+|+|+|+ |.+|...++.+...|..+|+++++++.+.+.++.+      ++..  .|..+    .+.+.++..  ++
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l------Ga~~--i~~~~~~~~~~~~~~~~~g~g~  255 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDA------GFET--IDLRNSAPLRDQIDQILGKPEV  255 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTT------TCEE--EETTSSSCHHHHHHHHHSSSCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc------CCcE--EcCCCcchHHHHHHHHhCCCCC
Confidence            4679999996 99999999988888986899999887766666554      4443  34433    233444433  58


Q ss_pred             cEEEEeccC
Q 021819           82 KGVFHVASP   90 (307)
Q Consensus        82 d~vi~~a~~   90 (307)
                      |+||.++|.
T Consensus       256 Dvvid~~g~  264 (398)
T 2dph_A          256 DCGVDAVGF  264 (398)
T ss_dssp             EEEEECSCT
T ss_pred             CEEEECCCC
Confidence            999999875

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=96.60  E-value=0.0027  Score=55.41  Aligned_cols=75  Identities=16%  Similarity=0.099  Sum_probs=52.0

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCC--h---hHHHHHh-cCc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD--S---GAVSRAV-EGC   81 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d--~---~~~~~~~-~~~   81 (307)
                      .+.+|+|+|+ |.+|...++.+...|..+|+++++++.+.+.++++      ++..+ .|..+  .   +.+.++. .++
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l------Ga~~v-i~~~~~~~~~~~~~~~~~~~g~  263 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF------GATDF-VNPNDHSEPISQVLSKMTNGGV  263 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT------TCCEE-ECGGGCSSCHHHHHHHHHTSCB
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh------CCceE-EeccccchhHHHHHHHHhCCCC
Confidence            4679999995 99999999999889986799998887776666554      33222 24432  1   2222222 268


Q ss_pred             cEEEEeccC
Q 021819           82 KGVFHVASP   90 (307)
Q Consensus        82 d~vi~~a~~   90 (307)
                      |+||+++|.
T Consensus       264 D~vid~~g~  272 (374)
T 1cdo_A          264 DFSLECVGN  272 (374)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	307
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	5e-29
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	4e-28
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-26
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-26
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	6e-25
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	8e-21
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	8e-20
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-18
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	4e-18
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-16
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	5e-16
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	2e-13
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	4e-13
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	7e-13
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	9e-13
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	5e-12
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	2e-11
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	2e-10
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	3e-10
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	1e-08
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-08
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	1e-07
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	2e-06
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	2e-06
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	3e-06
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	4e-06
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	5e-06
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	9e-06
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	1e-05
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	2e-05
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	3e-05
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	4e-05
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	4e-05
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	5e-05
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	5e-05
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	6e-05
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	6e-05
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	7e-05
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	9e-05
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	1e-04
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	2e-04
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	2e-04
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	2e-04
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	4e-04
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	5e-04
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	6e-04
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	6e-04
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	0.001
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	0.001
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	0.002
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.002
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	0.002
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	0.003
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	0.003
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	0.004
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	0.004
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	0.004

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (277), Expect = 5e-29
 Identities = 57/267 (21%), Positives = 101/267 (37%), Gaps = 22/267 (8%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + +TG  GF+G+ L   L+ + +       F      ++      G  N  +   DV++ 
Sbjct: 4   ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW--IGHENFELINHDVVE- 60

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS 131
                       ++H+ASP +  + +    + +     GTLN+L  AKR G  R+++ S+
Sbjct: 61  ----PLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAST 115

Query: 132 ISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHP 191
            S +  +P  +     E  W  +     R   Y   K +AE   + + ++ GV+V     
Sbjct: 116 -SEVYGDP--EVHPQSEDYWGHVNPIGPR-ACYDEGKRVAETMCYAYMKQEGVEVRVARI 171

Query: 192 ATCLGPLMQP-YLNASCAVLQQLLQGSK------DTQEYHWLGAVPVKDVAKAQVLLFES 244
               GP M           + Q LQG         +Q   +     V D+    V L  S
Sbjct: 172 FNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQ---YVSDLVNGLVALMNS 228

Query: 245 PAASGRYLCTNGIYQFGDFAERVSKLF 271
             +S   L     +   +FA+ +  L 
Sbjct: 229 NVSSPVNLGNPEEHTILEFAQLIKNLV 255

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score =  109 bits (272), Expect = 4e-28
 Identities = 45/298 (15%), Positives = 95/298 (31%), Gaps = 26/298 (8%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSIN----ATVFPGSDSSHLFALPGAGDANLRVFEA 66
              +TG  G  G++L + LL+  Y        A+ F      H++  P   +    +   
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62

Query: 67  DVLDSGAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR 124
           D+ D+  ++R +   +   V+++ +   +    +  +        GTL +LEA +  G+ 
Sbjct: 63  DLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLE 122

Query: 125 ---RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK 181
              R    S+ S +            ET+             Y V+K  A      + E 
Sbjct: 123 KKTRFYQAST-SELYGLVQEIP--QKETTPFYPRSP------YAVAKLYAYWITVNYRES 173

Query: 182 HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG-------AVPVKDV 234
           +G+            P  +     +  + + +   ++  +   +LG           KD 
Sbjct: 174 YGMYACNGILFNHESPR-RGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDY 232

Query: 235 AKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPVHRFVFQSPLRFILWLA 292
            K Q ++ +        + T   Y    F E  +                   ++ + 
Sbjct: 233 VKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVT 290

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score =  105 bits (263), Expect = 1e-26
 Identities = 48/264 (18%), Positives = 93/264 (35%), Gaps = 24/264 (9%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG-AGDANLRVFEADVLD 70
           + +TG  GFIG+ +V+ ++ N   ++   +   + + +L +L   +         AD+ D
Sbjct: 3   ILITGGAGFIGSAVVRHIIKNTQDTV-VNIDKLTYAGNLESLSDISESNRYNFEHADICD 61

Query: 71  SGAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV----- 123
           S  ++R  E  +   V H+A+   ++  +      I   + GT  +LE A+++       
Sbjct: 62  SAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGED 121

Query: 124 ----RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW-YPVSKTLAEKAAWEF 178
                R    S+       P         T     E         Y  SK  ++     +
Sbjct: 122 KKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAW 181

Query: 179 AEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK------DTQEYHWLGAVPVK 232
              +G+  +  + +   GP   P       V+   L+G          Q   W   + V+
Sbjct: 182 RRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIRDW---LYVE 237

Query: 233 DVAKAQVLLFESPAASGRYLCTNG 256
           D A+A  ++     A   Y     
Sbjct: 238 DHARALHMVVTEGKAGETYNIGGH 261

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score =  104 bits (261), Expect = 1e-26
 Identities = 60/282 (21%), Positives = 93/282 (32%), Gaps = 26/282 (9%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-----SSHLFALPGAGDANLRVFEA 66
           + VTG  GFIG+  V+ LL   Y  + A      D      +     P   D  LR    
Sbjct: 3   LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHG 62

Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
           D+ D+G ++R + G   + H A+   ++  +          VQGT  +L+ A   GV RV
Sbjct: 63  DIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRV 122

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
           V  S+              + E+S  +          Y  SK  ++  A  +   +G+DV
Sbjct: 123 VHVSTNQVYGSIDSGS---WTESSPLEPNSP------YAASKAGSDLVARAYHRTYGLDV 173

Query: 187 VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT------QEYHWLGAVPVKDVAKAQVL 240
                    GP   P        +  LL G              W   V   D  +   L
Sbjct: 174 RITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREW---VHTDDHCRGIAL 229

Query: 241 LFESPAASGRYL--CTNGIYQFGDFAERVSKLFPEFPVHRFV 280
           +     A   Y       +         +  L  ++   R V
Sbjct: 230 VLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKV 271

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score =  100 bits (248), Expect = 6e-25
 Identities = 70/297 (23%), Positives = 112/297 (37%), Gaps = 25/297 (8%)

Query: 1   MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAG--D 58
           + +    E   V VTGANGF+ + +V+ LL++ Y  +  T    S  ++L     A    
Sbjct: 3   IDNAVLPEGSLVLVTGANGFVASHVVEQLLEHGYK-VRGTARSASKLANLQKRWDAKYPG 61

Query: 59  ANLRVFEADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAA 118
                   D+L  GA    ++G  GV H+AS  +  +  D       PA+ GTLN L AA
Sbjct: 62  RFETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVT---PAIGGTLNALRAA 118

Query: 119 -KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP-----------V 166
                V+R V+TSS  + +        ++ +    +LE     K                
Sbjct: 119 AATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAA 178

Query: 167 SKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNA--SCAVLQQLLQGSKDTQE 222
           SKT AE AAW+F +++     + A+ P   +G +  P   +  +   +  L  G      
Sbjct: 179 SKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPAL 238

Query: 223 --YHWLGAVPVKDVAKAQVLLFESPAASGRY-LCTNGIYQFGDFAERVSKLFPEFPV 276
                   V   D+    +     P    R    T G + +        KL+P    
Sbjct: 239 ALMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTF 295

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 88.4 bits (218), Expect = 8e-21
 Identities = 34/199 (17%), Positives = 65/199 (32%), Gaps = 28/199 (14%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           V + G  G +G+ + + L       +         +                 E ++LDS
Sbjct: 5   VFIAGHRGMVGSAIRRQLEQRGDVEL------VLRTRD---------------ELNLLDS 43

Query: 72  GAVSRAVEGCK--GVFHVASPCT-LEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
            AV       +   V+  A+    +        + I   +    N++ AA +  V +++ 
Sbjct: 44  RAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLF 103

Query: 129 TSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVA 188
             S S I P    +     E     LE        Y ++K    K    +  ++G D  +
Sbjct: 104 LGS-SCIYPKLAKQPMAESELLQGTLEPTNE---PYAIAKIAGIKLCESYNRQYGRDYRS 159

Query: 189 IHPATCLGPLMQPYLNASC 207
           + P    GP    + + S 
Sbjct: 160 VMPTNLYGPHDNFHPSNSH 178

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.2 bits (212), Expect = 8e-20
 Identities = 47/266 (17%), Positives = 92/266 (34%), Gaps = 25/266 (9%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS----SHLFALPGAG-DANLRVFEADV 68
           +TG  G  G++L + LL+  Y          S +     HL+  P A  + N+++   D+
Sbjct: 6   ITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDL 65

Query: 69  LDSGAVSRAVEGCKG--VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
            DS  + + +   K   ++++ +   ++   D  +        GTL +L+A K  G+   
Sbjct: 66  TDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINS 125

Query: 127 V--VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGV 184
           V    +S S +            ET+             Y  +K  A      F E + +
Sbjct: 126 VKFYQASTSELYGKVQEIP--QKETTPFYPRSP------YGAAKLYAYWIVVNFREAYNL 177

Query: 185 DVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG-------AVPVKDVAKA 237
             V         P        +  + + + +      E   LG           KD  +A
Sbjct: 178 FAVNGILFNHESPRRGANF-VTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEA 236

Query: 238 QVLLFESPAASGRYLCTNGIYQFGDF 263
             L+ ++       + T  ++   +F
Sbjct: 237 MWLMLQNDEPEDFVIATGEVHSVREF 262

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 82.3 bits (202), Expect = 2e-18
 Identities = 36/188 (19%), Positives = 62/188 (32%), Gaps = 9/188 (4%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           V VTG +G+IG+     LL N +  I       S  S L  +   G  +    E D+ + 
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNE 62

Query: 72  GAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
             ++  +       V H A    + + V    E     V GTL ++ A +   V+  + +
Sbjct: 63  ALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFS 122

Query: 130 SSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAI 189
           SS +     P         T      Y KS+     +              +    +  +
Sbjct: 123 SSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILT-------DLQKAQPDWSIALL 175

Query: 190 HPATCLGP 197
                +G 
Sbjct: 176 RYFNPVGA 183

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 81.5 bits (200), Expect = 4e-18
 Identities = 39/267 (14%), Positives = 84/267 (31%), Gaps = 17/267 (6%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           + +TGA GFI + + + L    +  I +        +                  D+   
Sbjct: 18  ISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDM-------FCDEFHLVDLRVM 70

Query: 72  GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELIL-PAVQGTLNVLEAAKRFGVRRVVVTS 130
               +  EG   VF++A+       +     +I+      + N++EAA+  G++R    S
Sbjct: 71  ENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYAS 130

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
           S + I P              +D    + +   + + K   E+    + +  G++     
Sbjct: 131 S-ACIYPEFKQLETTNVSLKESDAWPAEPQ-DAFGLEKLATEELCKHYNKDFGIECRIGR 188

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA-------VPVKDVAKAQVLLFE 243
                GP          A      +    T  +   G          + +  +  + L +
Sbjct: 189 FHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTK 248

Query: 244 SPAASGRYLCTNGIYQFGDFAERVSKL 270
           S       + ++ +    + AE V   
Sbjct: 249 SDFREPVNIGSDEMVSMNEMAEMVLSF 275

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 75.8 bits (185), Expect = 4e-16
 Identities = 32/196 (16%), Positives = 64/196 (32%), Gaps = 8/196 (4%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            + VTG  GFIG+  V  + +N+       +   + + +   L       + +   D+ D
Sbjct: 4   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIAD 63

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA-----AKRFGVRR 125
           +  V +       + H A+    ++ ++     I     GT  +LEA      +   V  
Sbjct: 64  AELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVST 123

Query: 126 VVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVD 185
             V   +      PG      ++ +        S    Y  +K  ++     +    GV 
Sbjct: 124 DEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSS---PYSSTKAASDLIVKAWVRSFGVK 180

Query: 186 VVAIHPATCLGPLMQP 201
               + +   GP    
Sbjct: 181 ATISNCSNNYGPYQHI 196

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 75.0 bits (183), Expect = 5e-16
 Identities = 46/254 (18%), Positives = 87/254 (34%), Gaps = 19/254 (7%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           +  VTG  G  G +L K LL+  Y          SD+       G  + +++  + D+ D
Sbjct: 2   SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMAD 60

Query: 71  SGAVSRAVEGCKG--VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
           + +V RAV   +   V+++A+   +    +      +    G  ++LEA ++F       
Sbjct: 61  ACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFY 120

Query: 129 TSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVA 188
            +S S +        +  DE +          +  Y V+K         + E  G+   +
Sbjct: 121 QASTSEMFGLIQA--ERQDENTPFY------PRSPYGVAKLYGHWITVNYRESFGLHASS 172

Query: 189 IHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA-------VPVKDVAKAQVLL 241
                   PL       +  V   + +     Q+   LG            D  +A  L+
Sbjct: 173 GILFNHESPLRGIE-FVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLM 231

Query: 242 FESPAASGRYLCTN 255
            +   A    + T 
Sbjct: 232 LQQDKADDYVVATG 245

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 67.8 bits (164), Expect = 2e-13
 Identities = 39/197 (19%), Positives = 73/197 (37%), Gaps = 13/197 (6%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDSSHLFALPGAGDANLRVFEADVLD 70
           + +TG  GF+G+ L    L      I          + +L  L   G  N      D+ +
Sbjct: 3   LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLG--NFEFVHGDIRN 60

Query: 71  SGAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
              V+R +        FH+A    +   +D         V GTLN+LEA +++     ++
Sbjct: 61  KNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNII 120

Query: 129 TSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP--------VSKTLAEKAAWEFAE 180
            SS + +  +         ET +T ++      +            SK  A++   ++A 
Sbjct: 121 YSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYAR 180

Query: 181 KHGVDVVAIHPATCLGP 197
             G++ V    ++  G 
Sbjct: 181 IFGLNTVVFRHSSMYGG 197

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 66.6 bits (161), Expect = 4e-13
 Identities = 32/199 (16%), Positives = 64/199 (32%), Gaps = 14/199 (7%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSIN----ATVFPGSDSSHLFALP-GAGDANLRVFE 65
              +TG  G  G++L + LL   Y        ++ F     +H++  P     A +++  
Sbjct: 3   IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHY 62

Query: 66  ADVLDSGAVSRAVEGCKG--VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
           AD+ D+ ++ R ++  K   V+++A+   +    +           G L +LEA +   +
Sbjct: 63  ADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTI 122

Query: 124 RRVVVTSSISAIVPNPG-WKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH 182
                     A              ET+        +  K        A      + E +
Sbjct: 123 DSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCA------AHWYTVNYREAY 176

Query: 183 GVDVVAIHPATCLGPLMQP 201
           G+            P    
Sbjct: 177 GLFACNGILFNHESPRRGE 195

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 65.8 bits (159), Expect = 7e-13
 Identities = 41/217 (18%), Positives = 79/217 (36%), Gaps = 7/217 (3%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V VTG  G+IG+  V  L++N Y  + A     S    +  L      ++  +E D+ D
Sbjct: 3   IVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCD 62

Query: 71  SGAVSRAVEGCK--GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
              + +  +  K   V H A    + +            + GT+ +LE  +++ V + V 
Sbjct: 63  RKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVF 122

Query: 129 TSSISAIVPNPGWKGKV-FDETSWTDLEYCKSRKK----WYPVSKTLAEKAAWEFAEKHG 183
           +SS +       +   +   E             K            ++K +W+FA    
Sbjct: 123 SSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRY 182

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT 220
            + +  HP+  +G       N     + Q+  G ++ 
Sbjct: 183 FNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREK 219

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 65.4 bits (158), Expect = 9e-13
 Identities = 50/279 (17%), Positives = 88/279 (31%), Gaps = 22/279 (7%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL----PGAGDANLRVFEA 66
              +TG  GFIG+ L++TLL  +   +    F      +L  +         +N +  + 
Sbjct: 18  VWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQG 77

Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
           D+ +    + A  G   V H A+  ++   ++         + G LN+L AA+   V+  
Sbjct: 78  DIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSF 137

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
              +S S    +PG       E +             Y V+K + E  A  F+  +G   
Sbjct: 138 TYAASSSTYGDHPGLP---KVEDTIGKPLSP------YAVTKYVNELYADVFSRCYGFST 188

Query: 187 VAIHPATCLGPLMQP---YLNASCAVLQQLLQGSK-----DTQEYHWLGAVPVKDVAKAQ 238
           + +      G    P   Y          ++QG       D +       +     A   
Sbjct: 189 IGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLL 248

Query: 239 VLLFESPAASGRYLCTNG-IYQFGDFAERVSKLFPEFPV 276
                  A +  Y    G           +     E  V
Sbjct: 249 AATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGV 287

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 63.5 bits (153), Expect = 5e-12
 Identities = 36/266 (13%), Positives = 72/266 (27%), Gaps = 37/266 (13%)

Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
           ++++T+ V GA G  G  L++      +  + A V        L A       N+ +F+ 
Sbjct: 1   QQKKTIAVVGATGRQGASLIRVAAAVGHH-VRAQVH---SLKGLIAEELQAIPNVTLFQG 56

Query: 67  DVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRV 126
            +L++  +   +     +  + +     D            +    ++ +AAKR G  + 
Sbjct: 57  PLLNNVPLMDTLFEGAHLAFINTTSQAGDE-----------IAIGKDLADAAKRAGTIQH 105

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
            + SS+        W         +T   Y +      P +   A      F        
Sbjct: 106 YIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQL--GLPSTFVYAGIYNNNFTSLPYPLF 163

Query: 187 VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA 246
                         P+                   +          DV  A + +F+   
Sbjct: 164 QMELMPDGTFEWHAPF-----------------DPDIPLPWLDAEHDVGPALLQIFKDGP 206

Query: 247 ASG---RYLCTNGIYQFGDFAERVSK 269
                 R   T             S+
Sbjct: 207 QKWNGHRIALTFETLSPVQVCAAFSR 232

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 61.3 bits (147), Expect = 2e-11
 Identities = 28/268 (10%), Positives = 64/268 (23%), Gaps = 34/268 (12%)

Query: 7   KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP-GSDSSHLFALPGAGDANLRVFE 65
            ++  V + G  G+IG  +V   +   + +         S+   +  L        ++ E
Sbjct: 1   DKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIE 60

Query: 66  ADVLDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR 125
           A + D   +  A++    V    +   L   +              L ++EA K  G  +
Sbjct: 61  ASLDDHQRLVDALKQVDVVISALAGGVLSHHIL-----------EQLKLVEAIKEAGNIK 109

Query: 126 VVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVD 185
             + S                                       + ++      E   + 
Sbjct: 110 RFLPSEFGMDPDIMEH-------------------ALQPGSITFIDKRKVRRAIEAASIP 150

Query: 186 VVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP 245
              +      G            ++    +             V   DV    +   + P
Sbjct: 151 YTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDP 210

Query: 246 AASGR---YLCTNGIYQFGDFAERVSKL 270
               +         I    +  +   +L
Sbjct: 211 QTLNKTMYIRPPMNILSQKEVIQIWERL 238

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 57.9 bits (138), Expect = 2e-10
 Identities = 42/271 (15%), Positives = 73/271 (26%), Gaps = 30/271 (11%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYT-SINATVFPGSDSSHLFALPGAGDANLRVFEADVL 69
           TV VTGA+G  G  + K L + +        V        +            VF  D+ 
Sbjct: 5   TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------GGEADVFIGDIT 57

Query: 70  DSGAVSRAVEGCKGVFHVASPCTLEDPV-DPEKELILPAVQGTLNVLEAAKRFGVRRVVV 128
           D+ +++ A +G   +  + S      P  DP K      +       E     G +  + 
Sbjct: 58  DADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQID 117

Query: 129 TSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVA 188
            + ++ +                   +        +        + A ++    G     
Sbjct: 118 AAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWK-------RKAEQYLADSGTPYTI 170

Query: 189 IHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAAS 248
           I     L                +LL G  D         VP  DVA+  +       A 
Sbjct: 171 IRAGGLLDKEGGVR---------ELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAK 221

Query: 249 GRYL-----CTNGIYQFGDFAERVSKLFPEF 274
            +                DF    S++   F
Sbjct: 222 NKAFDLGSKPEGTSTPTKDFKALFSQVTSRF 252

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.6 bits (135), Expect = 3e-10
 Identities = 35/248 (14%), Positives = 62/248 (25%), Gaps = 47/248 (18%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            + + GA G  G   +   +   Y  +   V   S                 V   DVL 
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYE-VTVLVRDSSRLPSEG------PRPAHVVVGDVLQ 57

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
           +  V + V G   V  +            +        +G  N++ A K  GV +VV  +
Sbjct: 58  AADVDKTVAGQDAVIVLLGT-------RNDLSPTTVMSEGARNIVAAMKAHGVDKVVACT 110

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
           S   +                               + T       +   + G+  VA+ 
Sbjct: 111 SAFLLWDPTKV--------------------PPRLQAVTDDHIRMHKVLRESGLKYVAVM 150

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGR 250
           P      +    L  +  V       S           +   D+    +    +    G 
Sbjct: 151 P----PHIGDQPLTGAYTVTLDGRGPS---------RVISKHDLGHFMLRCLTTDEYDGH 197

Query: 251 YLCTNGIY 258
               +  Y
Sbjct: 198 STYPSHQY 205

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 52.9 bits (125), Expect = 1e-08
 Identities = 32/264 (12%), Positives = 66/264 (25%), Gaps = 41/264 (15%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFP--GSDSSHLFALPGAGDANLRVFEADVL 69
           + + GA G+IG  + K  LD  + +          S+S     L     +   +    + 
Sbjct: 6   ILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSID 65

Query: 70  DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT 129
           D  ++  AV+    V                       ++  +N+++A K  G  +    
Sbjct: 66  DHASLVEAVKNVDVVISTVGSLQ---------------IESQVNIIKAIKEVGTVKRFFP 110

Query: 130 SSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAI 189
           S            G   D     +        K                 E  G+    +
Sbjct: 111 SEF----------GNDVDNVHAVEPAKSVFEVKAKV----------RRAIEAEGIPYTYV 150

Query: 190 HPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASG 249
                 G  ++    A      +  +          +  V  +D+    +   + P    
Sbjct: 151 SSNCFAGYFLRSLAQAGLTAPPR-DKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLN 209

Query: 250 RYLCTNG---IYQFGDFAERVSKL 270
           + L            +      K 
Sbjct: 210 KTLYLRLPANTLSLNELVALWEKK 233

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.4 bits (124), Expect = 2e-08
 Identities = 43/195 (22%), Positives = 69/195 (35%), Gaps = 17/195 (8%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSI------NATVFPGSDSSHLFALPGAGDANLRVFE 65
           V VTG  G+IG+  V  LL+  Y  +      NA    GS    L  +      ++   E
Sbjct: 5   VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64

Query: 66  ADVLDSGAVSRAVEGCKG--VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
            D+LD GA+ R  +      V H A    + + V    +     + GT+ +LE  K  GV
Sbjct: 65  MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGV 124

Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH- 182
           + +V +SS +                   +          Y  SK   E+   +  +   
Sbjct: 125 KNLVFSSSATVYGNPQYLP--------LDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADK 176

Query: 183 GVDVVAIHPATCLGP 197
             + V +      G 
Sbjct: 177 TWNAVLLRYFNPTGA 191

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 49.8 bits (117), Expect = 1e-07
 Identities = 32/219 (14%), Positives = 58/219 (26%), Gaps = 6/219 (2%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V VTG  GF G WL   L     T    ++   +  S            ++    D+ D
Sbjct: 10  RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR--VADGMQSEIGDIRD 67

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAV--QGTLNVLEAAKRFGVRRVVV 128
              +  ++   +              +   + +   +    GT+ +LEA +  G  + VV
Sbjct: 68  QNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVV 127

Query: 129 TSSISAIVPNPGWKGKVFDETSW--TDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
             +      N  W     +  +    D             S             +HG  V
Sbjct: 128 NITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAV 187

Query: 187 VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW 225
             +     +G            +L+   Q          
Sbjct: 188 ATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPH 226

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (109), Expect = 2e-06
 Identities = 37/263 (14%), Positives = 75/263 (28%), Gaps = 39/263 (14%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG-AGDANLRVFEADVL 69
              VTGA   IG    + LL              +      AL            + DV 
Sbjct: 5   VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVA 64

Query: 70  DSGAVSRAVEGCK-------GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG 122
           D   +                + + A     ++     +  ++  + GT   L+   +  
Sbjct: 65  DQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQN 124

Query: 123 VR---RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFA 179
                 ++  SS++ ++P                  YC S+      +++ A   A    
Sbjct: 125 GGEGGIIINMSSLAGLMPVAQQPV------------YCASKHGIVGFTRSAA--LAANLM 170

Query: 180 EKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK------D 233
              GV + AI P      +++       ++ ++   G     + H    +          
Sbjct: 171 -NSGVRLNAICPGFVNTAILE-------SIEKEENMGQYIEYKDHIKDMIKYYGILDPPL 222

Query: 234 VAKAQVLLFESPAASGRYLCTNG 256
           +A   + L E  A +G  +    
Sbjct: 223 IANGLITLIEDDALNGAIMKITT 245

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 46.5 bits (108), Expect = 2e-06
 Identities = 33/240 (13%), Positives = 58/240 (24%), Gaps = 26/240 (10%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYT----------------SINATVFPGSDSSHLFALPG 55
           V V G +G+ G      L   NY                  + +     S    +     
Sbjct: 4   VMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKA 63

Query: 56  AGDANLRVFEADVLDSGAVSRAVE-----GCKGVFHVASPCTLEDPVDPEKELILPAVQG 110
               ++ ++  D+ D   ++ + +              S                  V G
Sbjct: 64  LTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIG 123

Query: 111 TLNVLEAAKRFGVRRVVVTSSISA-----IVPNPGWKGKVFDETSWTDLEYCKSRKKWYP 165
           TLNVL A K FG    +V            +        +        L Y K    +Y 
Sbjct: 124 TLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYH 183

Query: 166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW 225
           +SK           +  G+    ++     G              +        T    +
Sbjct: 184 LSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRF 243

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 45.7 bits (106), Expect = 3e-06
 Identities = 14/65 (21%), Positives = 21/65 (32%), Gaps = 5/65 (7%)

Query: 12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
          V + G NGFIG  L + LL  ++  +          S     P     +    E D+   
Sbjct: 3  VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHP-----HFHFVEGDISIH 57

Query: 72 GAVSR 76
               
Sbjct: 58 SEWIE 62

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 45.1 bits (106), Expect = 4e-06
 Identities = 37/251 (14%), Positives = 68/251 (27%), Gaps = 26/251 (10%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
              VTGA   IG  +   L       I         +  + A      ++    +A+V  
Sbjct: 20  VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGV 79

Query: 71  SGAVSRAVEGCK---GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV 127
              + R  E      G   +    +        K++          +    + F  R   
Sbjct: 80  VEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAR--- 136

Query: 128 VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK----TLAEKAAWEFAEKHG 183
                     +    G++    S T       +   Y  SK    T A   A + A    
Sbjct: 137 ------EAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMA-DKK 189

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK------DVAKA 237
           + V  + P      +            + L   +++  EY  +   P++      D+A+ 
Sbjct: 190 ITVNVVAPGGIKTDMYHAVCREYIPNGENL--SNEEVDEYAAVQWSPLRRVGLPIDIARV 247

Query: 238 QVLLFESPAAS 248
            V    S    
Sbjct: 248 -VCFLASNDGG 257

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 44.7 bits (105), Expect = 5e-06
 Identities = 42/258 (16%), Positives = 74/258 (28%), Gaps = 53/258 (20%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
           V VTGA+  IG  +  +L       +         +  +     A       F  DV   
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKE 63

Query: 72  GAVSRAVE-----------GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKR 120
             V   ++                        +        E+I   + G     +AA +
Sbjct: 64  ADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATK 123

Query: 121 FGVR----RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAW 176
             ++    R++  +S+  ++ N G               Y  ++      SKT     A 
Sbjct: 124 IMMKKRKGRIINIASVVGLIGNIGQAN------------YAAAKAGVIGFSKTA----AR 167

Query: 177 EFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK---- 232
           E A    ++V  +                   +   +     +  E   LG +P+     
Sbjct: 168 EGA-SRNINVNVV---------------CPGFIASDMTAKLGEDMEKKILGTIPLGRTGQ 211

Query: 233 --DVAKAQVLLFESPAAS 248
             +VA     L  SPAAS
Sbjct: 212 PENVAGLVEFLALSPAAS 229

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 43.7 bits (102), Expect = 9e-06
 Identities = 35/203 (17%), Positives = 56/203 (27%), Gaps = 27/203 (13%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           +V VTGAN  IG  LV+ L+ +        +    D      L    D+ + V    V  
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNI--RHIIATARDVEKATELKSIKDSRVHVLPLTVTC 62

Query: 71  SGAVSRAVE------GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNV---------- 114
             ++   V       G  G+  + +   +        E     +   L+V          
Sbjct: 63  DKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQ 122

Query: 115 --LEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKT--- 169
             L   K    +      S+S         G      + +           Y +SK    
Sbjct: 123 KLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQ--FPVLAYRMSKAAIN 180

Query: 170 -LAEKAAWEFAEKHGVDVVAIHP 191
                 A +      V VV   P
Sbjct: 181 MFGRTLAVDLK-DDNVLVVNFCP 202

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 43.8 bits (103), Expect = 1e-05
 Identities = 33/266 (12%), Positives = 70/266 (26%), Gaps = 52/266 (19%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNY----TSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
              +TG++  IG                T  +A      ++       G  + N+    A
Sbjct: 7   VAIITGSSNGIGRATAVLFAREGAKVTITGRHAE--RLEETRQQILAAGVSEQNVNSVVA 64

Query: 67  DVLDSGAVSRAVEGCK-------GVFHVASPCTLEDPVDPEKELILPAVQGTLNV----- 114
           DV         +            + + A     +          + +   TLN+     
Sbjct: 65  DVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSV 124

Query: 115 -------LEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS 167
                  +          V ++S  S +   P +                     +Y ++
Sbjct: 125 IALTKKAVPHLSSTKGEIVNISSIASGLHATPDF--------------------PYYSIA 164

Query: 168 K----TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY 223
           K          A +   +HG+ V +I P           +       ++        +E 
Sbjct: 165 KAAIDQYTRNTAIDLI-QHGIRVNSISPGLVATG-FGSAMGMPEETSKKFYSTMATMKEC 222

Query: 224 HWLGAVP-VKDVAKAQVLLFESPAAS 248
              G +   +D+A+    L +   +S
Sbjct: 223 VPAGVMGQPQDIAEVIAFLADRKTSS 248

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 42.5 bits (100), Expect = 2e-05
 Identities = 42/267 (15%), Positives = 69/267 (25%), Gaps = 71/267 (26%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNY----TSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
            V VTG    IG  + +             +                  A       F+ 
Sbjct: 7   GVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-----------GKEVAEAIGGAFFQV 55

Query: 67  DVLDSGAVSRAVEGCKGVFH----------VASPCTLEDPVDPEKELILPA-VQGTLNVL 115
           D+ D     R VE                 +A+P +      PE   +L   +   +++ 
Sbjct: 56  DLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLS 115

Query: 116 EAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK--- 168
             A R     G   +V  +S+  +                            Y  SK   
Sbjct: 116 ALAAREMRKVGGGAIVNVASVQGLFAEQEN--------------------AAYNASKGGL 155

Query: 169 -TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG 227
             L    A + A    + V A+ P       +   +  S            +     W  
Sbjct: 156 VNLTRSLALDLA-PLRIRVNAVAPGAIATEAVLEAIALS---------PDPERTRRDWED 205

Query: 228 AVPVK------DVAKAQVLLFESPAAS 248
              ++      +VA+A VL   S  AS
Sbjct: 206 LHALRRLGKPEEVAEA-VLFLASEKAS 231

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 42.7 bits (98), Expect = 3e-05
 Identities = 13/26 (50%), Positives = 16/26 (61%)

Query: 12 VCVTGANGFIGTWLVKTLLDNNYTSI 37
          + VTG  GFIG+ +VK L D   T I
Sbjct: 2  IIVTGGAGFIGSNIVKALNDKGITDI 27

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 41.9 bits (98), Expect = 4e-05
 Identities = 34/258 (13%), Positives = 71/258 (27%), Gaps = 38/258 (14%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V    A G IG    + L+  N  +        + ++           N+     DV  
Sbjct: 7   NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTV 66

Query: 71  SGA-----VSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR 125
             A     + +  +  K V  + +   + D    E+ + +    G +N   A   F  +R
Sbjct: 67  PVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIAI-NFTGLVNTTTAILDFWDKR 125

Query: 126 -------VVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEF 178
                  +    S++                      Y  S+      + +LA+ A    
Sbjct: 126 KGGPGGIIANICSVTGFNAIHQVPV------------YSASKAAVVSFTNSLAKLAP--- 170

Query: 179 AEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQ 238
               GV   +I+P     PL+  + +        +     +    H       +   +  
Sbjct: 171 --ITGVTAYSINPGITRTPLVHTFNSW-----LDVEPRVAELLLSHPTQ--TSEQCGQN- 220

Query: 239 VLLFESPAASGRYLCTNG 256
            +       +G     + 
Sbjct: 221 FVKAIEANKNGAIWKLDL 238

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (97), Expect = 4e-05
 Identities = 42/251 (16%), Positives = 70/251 (27%), Gaps = 44/251 (17%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V VTGA   IG   V+ L       +          + L +L       +     D+ D
Sbjct: 9   RVLVTGAGKGIGRGTVQALHATGARVVAV----SRTQADLDSLVRECP-GIEPVCVDLGD 63

Query: 71  SGAVSRAVEGCKGV-------FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAA----- 118
             A  RA+     V               LE   +         ++  + V +       
Sbjct: 64  WEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLI 123

Query: 119 KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEF 178
            R     +V  SS  +                     YC ++     ++K +A     E 
Sbjct: 124 ARGVPGAIVNVSSQCSQRAVTNHSV------------YCSTKGALDMLTKVMAL----EL 167

Query: 179 AEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG-AVPVKDVAKA 237
              H + V A++P   +  + Q   +             K       LG    V+ V  A
Sbjct: 168 G-PHKIRVNAVNPTVVMTSMGQATWSDPHKA--------KTMLNRIPLGKFAEVEHVVNA 218

Query: 238 QVLLFESPAAS 248
            +L   S  + 
Sbjct: 219 -ILFLLSDRSG 228

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 41.5 bits (97), Expect = 5e-05
 Identities = 36/255 (14%), Positives = 73/255 (28%), Gaps = 44/255 (17%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
              VTG    +G  +VK LL           F   + +    L             DV  
Sbjct: 8   VALVTGGASGVGLEVVKLLLGEGAK----VAFSDINEAAGQQLAAELGERSMFVRHDVSS 63

Query: 71  SGAVSRAVEGCK-------------GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEA 117
               +  +   +             G+       T     +    L+    +      + 
Sbjct: 64  EADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRL--EDFSRLLKINTESVFIGCQQ 121

Query: 118 AKRFGVR---RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKA 174
                      ++  +S+S+ +P   + G            Y  S+     +++      
Sbjct: 122 GIAAMKETGGSIINMASVSSWLPIEQYAG------------YSASKAAVSALTRAA---- 165

Query: 175 AWEFAEK-HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKD 233
           A    ++ + + V +IHP     P+MQ  L     V ++++                 + 
Sbjct: 166 ALSCRKQGYAIRVNSIHPDGIYTPMMQASLPK--GVSKEMVLHDPKLNRAGRAYM--PER 221

Query: 234 VAKAQVLLFESPAAS 248
           +A+  VL   S  +S
Sbjct: 222 IAQL-VLFLASDESS 235

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (97), Expect = 5e-05
 Identities = 37/217 (17%), Positives = 60/217 (27%), Gaps = 41/217 (18%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V +TGA   IG              +   +             G G A +  F  D  +
Sbjct: 9   IVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG-AKVHTFVVDCSN 67

Query: 71  SGAVSRAVEGCK---GVFHVASPCTLEDPVDPEKELILPAVQGTLNV------------L 115
              +  + +  K   G   +                  P ++ T  V            L
Sbjct: 68  REDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFL 127

Query: 116 EAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAA 175
            A  +     +V  +S +  V  P                YC S+       KTL ++ A
Sbjct: 128 PAMTKNNHGHIVTVASAAGHVSVPFLLA------------YCSSKFAAVGFHKTLTDELA 175

Query: 176 WEFAEKHGVDVVAIHP-----------ATCLGPLMQP 201
               +  GV    + P           +T LGP ++P
Sbjct: 176 AL--QITGVKTTCLCPNFVNTGFIKNPSTSLGPTLEP 210

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 41.5 bits (97), Expect = 6e-05
 Identities = 32/263 (12%), Positives = 72/263 (27%), Gaps = 45/263 (17%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNY----TSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
           TV +TG++  IG                T  ++      ++  +    G  +  +    A
Sbjct: 7   TVIITGSSNGIGRTTAILFAQEGANVTITGRSSE--RLEETRQIILKSGVSEKQVNSVVA 64

Query: 67  DVLDSGAVSRAVEGCK-------GVFHVASPCTLEDPVDPEKELILPA--------VQGT 111
           DV       + +            + + A     +       +  +          +Q  
Sbjct: 65  DVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAV 124

Query: 112 LNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS 167
           + + +  K          V V+S ++     P +   ++   +   L+            
Sbjct: 125 IEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDF---LYYAIAKAALD------------ 169

Query: 168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG 227
                  A + A K G+ V ++ P           +       Q+        +E   +G
Sbjct: 170 -QYTRSTAIDLA-KFGIRVNSVSPGMVETGFTNA-MGMPDQASQKFYNFMASHKECIPIG 226

Query: 228 AVP-VKDVAKAQVLLFESPAASG 249
           A    + +A   +L       S 
Sbjct: 227 AAGKPEHIANI-ILFLADRNLSF 248

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 40.9 bits (94), Expect = 6e-05
 Identities = 33/251 (13%), Positives = 61/251 (24%), Gaps = 45/251 (17%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V + GA G  G  L+  +L     +                         +V       
Sbjct: 4   RVLLAGATGLTGEHLLDRILSEPTLA-------------------------KVI------ 32

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
             A +R             P      + P+ +  +      L               V  
Sbjct: 33  --APARKALAEHPRLDN--PVGPLAELLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDF 88

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIH 190
            +   V     +         + L        +Y   K   E+A  E        +    
Sbjct: 89  DLPLAVGKRALEMGARHYLVVSALGADAKSSIFYNRVKGELEQALQEQGWPQ---LTIAR 145

Query: 191 PATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGR 250
           P+   GP  +  L    A     +   K          +   D+A+A   L        R
Sbjct: 146 PSLLFGPREEFRLAEILAAPIARILPGK-------YHGIEACDLARALWRLALEEGKGVR 198

Query: 251 YLCTNGIYQFG 261
           ++ ++ + + G
Sbjct: 199 FVESDELRKLG 209

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (96), Expect = 7e-05
 Identities = 38/256 (14%), Positives = 70/256 (27%), Gaps = 41/256 (16%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAG-DANLRVFEADVL 69
              VTGA+G IG  + + L+      +      G+          AG    L  +  D+ 
Sbjct: 12  LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLS 71

Query: 70  DSGAVSRAVEGCKGVF----------HVASPCTLEDPVDPEKELIL-----PAVQGTLNV 114
           +   +       +              +A P TL        + +           T   
Sbjct: 72  NEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREA 131

Query: 115 LEAAKRFGVR--RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAE 172
            ++ K   V    ++  +S+S     P                Y  +  K+   + T   
Sbjct: 132 YQSMKERNVDDGHIININSMSGHRVLPLSVTHF----------YSAT--KYAVTALTEGL 179

Query: 173 KAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK 232
           +     A +  +    I P            +             K    Y  +  +  +
Sbjct: 180 RQELREA-QTHIRATCISPGVVETQFAFKLHDK---------DPEKAAATYEQMKCLKPE 229

Query: 233 DVAKAQVLLFESPAAS 248
           DVA+A V+   S  A 
Sbjct: 230 DVAEA-VIYVLSTPAH 244

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 40.8 bits (95), Expect = 9e-05
 Identities = 38/259 (14%), Positives = 74/259 (28%), Gaps = 43/259 (16%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
            V +TG    +G  LV   +                +  L  L      N+     DV  
Sbjct: 7   AVLITGGASGLGRALVDRFVAEGAK----VAVLDKSAERLAELETDHGDNVLGIVGDVRS 62

Query: 71  SGAVSRAVE-------------GCKGVFHVASPCTLEDPVDPE---KELILPAVQGTLNV 114
                +A                  G++  ++          +    E+    V+G ++ 
Sbjct: 63  LEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHA 122

Query: 115 LEAAKRFGVRR---VVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLA 171
           ++A     V     V+ T S +   PN G               Y  ++     + + L 
Sbjct: 123 VKACLPALVASRGNVIFTISNAGFYPNGGGPL------------YTAAKHAIVGLVREL- 169

Query: 172 EKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP- 230
              A+E A    V V  +        L  P      +     +  +   +    +G +P 
Sbjct: 170 ---AFELA--PYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPE 224

Query: 231 VKDVAKAQVLLFESPAASG 249
           V++   A  + F +   + 
Sbjct: 225 VEEYTGA-YVFFATRGDAA 242

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 40.7 bits (93), Expect = 1e-04
 Identities = 10/71 (14%), Positives = 20/71 (28%), Gaps = 19/71 (26%)

Query: 12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS 71
          + + G  G +G  L ++L                            D + + F  D  + 
Sbjct: 3  ILLFGKTGQVGWELQRSLAPVGNLIA-------------------LDVHSKEFCGDFSNP 43

Query: 72 GAVSRAVEGCK 82
            V+  V   +
Sbjct: 44 KGVAETVRKLR 54

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 39.8 bits (92), Expect = 2e-04
 Identities = 30/248 (12%), Positives = 63/248 (25%), Gaps = 24/248 (9%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           T  +TG+   IG    +  +               +     A              DV D
Sbjct: 7   TALITGSARGIGRAFAEAYVREGAR----VAIADINLEAARATAAEIGPAACAIALDVTD 62

Query: 71  SGAVSRAVEGCK---GVFHVASPCTLEDPVDPEKELILPAVQGTLNV-LEAAKRFGVRRV 126
             ++ R V       G   +         + P  E+   +      + +           
Sbjct: 63  QASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVA 122

Query: 127 VVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDV 186
               +            +           YC ++     ++++           +HG++V
Sbjct: 123 RAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSA----GLNLI-RHGINV 177

Query: 187 VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK------DVAKAQVL 240
            AI P    G +   + +   A         +  ++     AVP        D+     +
Sbjct: 178 NAIAP----GVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGM-AI 232

Query: 241 LFESPAAS 248
              +P A 
Sbjct: 233 FLATPEAD 240

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (91), Expect = 2e-04
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 11 TVCVTGANGFIGTWLVKTLLDNNY 34
          +V + GA+G  G  L+K +L+   
Sbjct: 16 SVFILGASGETGRVLLKEILEQGL 39

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 39.8 bits (91), Expect = 2e-04
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 12 VCVTGANGFIGTWLVKTLLDNNYTSI 37
          + +TGANG +G  + K L   N   I
Sbjct: 4  ILITGANGQLGREIQKQLKGKNVEVI 29

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 38.8 bits (90), Expect = 4e-04
 Identities = 40/264 (15%), Positives = 72/264 (27%), Gaps = 59/264 (22%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           T  VTG +  IG  +V+ L     +    +      +  L      G   +     D+  
Sbjct: 10  TALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG-FKVEASVCDLSS 68

Query: 71  SGAVSRAVEGCKGVFH-----------VASPCTLEDPVDPEKELILPA-VQGTLNVLEAA 118
                  +      FH           +      +D    +  LI+    +   ++   A
Sbjct: 69  RSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLA 128

Query: 119 ----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK----TL 170
               K      VV  SS+S  +  P                        Y  +K     L
Sbjct: 129 HPFLKASERGNVVFISSVSGALAVPYE--------------------AVYGATKGAMDQL 168

Query: 171 AEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP 230
               A+E+A K  + V  + P      L++  +              +       +    
Sbjct: 169 TRCLAFEWA-KDNIRVNGVGPGVIATSLVEMTIQD----------PEQKENLNKLIDRCA 217

Query: 231 VK------DVAKAQVLLFESPAAS 248
           ++      ++A   V     PAAS
Sbjct: 218 LRRMGEPKELAAM-VAFLCFPAAS 240

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.4 bits (89), Expect = 5e-04
 Identities = 46/251 (18%), Positives = 82/251 (32%), Gaps = 44/251 (17%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
              VTGA   IG   VK L  +      A V   + ++            +     D+ D
Sbjct: 7   RALVTGAGKGIGRDTVKALHAS-----GAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGD 61

Query: 71  SGAVSRAVEGCKGV---FHVASP----CTLEDPVDPEKELILPAVQGTLNVLEAA----- 118
             A  +A+ G   V    + A+       LE   +         ++    V +       
Sbjct: 62  WDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMI 121

Query: 119 KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEF 178
            R     +V  SS+ A V  P              + Y  ++     ++K +A     E 
Sbjct: 122 NRGVPGSIVNVSSMVAHVTFPNL------------ITYSSTKGAMTMLTKAMAM----EL 165

Query: 179 AEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP-VKDVAKA 237
              H + V +++P   L   M   ++A     ++L +        H L     V+DV  +
Sbjct: 166 G-PHKIRVNSVNPTVVLTD-MGKKVSADPEFARKLKER-------HPLRKFAEVEDVVNS 216

Query: 238 QVLLFESPAAS 248
            +L   S  ++
Sbjct: 217 -ILFLLSDRSA 226

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 38.3 bits (88), Expect = 6e-04
 Identities = 34/251 (13%), Positives = 65/251 (25%), Gaps = 25/251 (9%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVL 69
              VTG+   IG  +   L       +       ++   + A L       +    AD+ 
Sbjct: 6   VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLS 65

Query: 70  DSGAVSRAVE------GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV 123
              AV   V+      G   +    +       ++        A+               
Sbjct: 66  KGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAA 125

Query: 124 RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHG 183
              +       I+      G V          Y  ++      +K  A     E A   G
Sbjct: 126 LPHMKKQGFGRIINIASAHGLVASANKSA---YVAAKHGVVGFTKVTA----LETA-GQG 177

Query: 184 VDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK------DVAKA 237
           +   AI P     PL++  ++   A+ ++     +           P         +   
Sbjct: 178 ITANAICPGWVRTPLVEKQIS---ALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGT 234

Query: 238 QVLLFESPAAS 248
             +   S AA+
Sbjct: 235 -AVFLASDAAA 244

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (88), Expect = 6e-04
 Identities = 49/267 (18%), Positives = 83/267 (31%), Gaps = 43/267 (16%)

Query: 12  VCVTGANGFIGTWLVKTLLDNNYTSIN--ATVFPGSDSSHLFALP---GAGDANLRVFEA 66
           V +TG +  IG  L   L  +   S    AT+        L+           +L   + 
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64

Query: 67  DVLDSGAVSRAVEGCKGVF-------------HVASPCTLEDPVDPEKELILPAVQGTLN 113
           DV DS +V+ A E                           +         ++  V+    
Sbjct: 65  DVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQA 124

Query: 114 VLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEK 173
            L   KR G  RV+VT S+  ++  P                YC S+     + ++LA  
Sbjct: 125 FLPDMKRRGSGRVLVTGSVGGLMGLPFNDV------------YCASKFALEGLCESLA-- 170

Query: 174 AAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVL--------QQLLQGSKDTQEYHW 225
                    GV +  I         M+  L +   VL         +  Q    +++   
Sbjct: 171 --VLLL-PFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFR 227

Query: 226 LGAVPVKDVAKAQVLLFESPAASGRYL 252
             A   ++VA+  +    +P  + RY 
Sbjct: 228 EAAQNPEEVAEVFLTALRAPKPTLRYF 254

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 37/252 (14%), Positives = 72/252 (28%), Gaps = 26/252 (10%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNY----TSINATVFPGSDSSHLFALPGAGDANLRVFEA 66
           +V +TG++  IG                T  N       ++       G     +    A
Sbjct: 6   SVIITGSSNGIGRSAAVIFAKEGAQVTITGRNED--RLEETKQQILKAGVPAEKINAVVA 63

Query: 67  DVLDSGAVSRAVEGCKGVF-----HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF 121
           DV ++      +      F      V +            +  +   Q T  +   A   
Sbjct: 64  DVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA--- 120

Query: 122 GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK----TLAEKAAWE 177
                V+  +          KG++ + +S        S   +Y  +K          A +
Sbjct: 121 -----VIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAID 175

Query: 178 FAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP-VKDVAK 236
              +HGV V ++ P       M   +        +L       +E   +G     +++A 
Sbjct: 176 LI-QHGVRVNSVSPGAVATGFMGA-MGLPETASDKLYSFIGSRKECIPVGHCGKPEEIAN 233

Query: 237 AQVLLFESPAAS 248
             V L +   +S
Sbjct: 234 IIVFLADRNLSS 245

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 37.3 bits (86), Expect = 0.001
 Identities = 38/266 (14%), Positives = 70/266 (26%), Gaps = 63/266 (23%)

Query: 8   EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEAD 67
           E +   VTGA   IG  + K L  +    I  +    S  S +  +   G      +  D
Sbjct: 9   ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFG-YESSGYAGD 67

Query: 68  VLDSGAVSRAVE-----------GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLE 116
           V     +S  +                         L    D  ++++   +     + +
Sbjct: 68  VSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQ 127

Query: 117 AAKRFGVR----RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK---- 168
              +  +     R++  SSI  +  N G                       Y  SK    
Sbjct: 128 PISKRMINNRYGRIINISSIVGLTGNVGQAN--------------------YSSSKAGVI 167

Query: 169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA 228
              +  A E A    + V AI P                 +   +     +  + + +  
Sbjct: 168 GFTKSLAKELA-SRNITVNAIAP---------------GFISSDMTDKISEQIKKNIISN 211

Query: 229 VPVK------DVAKAQVLLFESPAAS 248
           +P        +VA        S  + 
Sbjct: 212 IPAGRMGTPEEVANL-ACFLSSDKSG 236

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 37.0 bits (85), Expect = 0.002
 Identities = 40/261 (15%), Positives = 74/261 (28%), Gaps = 50/261 (19%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           T+ VTG N  IG    + +                       +        + ++ DV +
Sbjct: 11  TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN 70

Query: 71  SGAVSRAVEGCKGVF----------HVASPCTLEDPVDPEKELILPAVQ--GTLNVLEAA 118
           +  V++ ++                 V+      + +  E    +  V   G  N   A 
Sbjct: 71  TDIVTKTIQQIDADLGPISGLIANAGVSVVKPATE-LTHEDFAFVYDVNVFGVFNTCRAV 129

Query: 119 KR-----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEK 173
            +          +VVTSS+S+ + N         +       Y  S+     + K L   
Sbjct: 130 AKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVF-----YNSSKAACSNLVKGL--- 181

Query: 174 AAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK- 232
            A E+A   G+ V A+ P                 V              H    +P+  
Sbjct: 182 -AAEWA-SAGIRVNALSP---------------GYVNTDQTAHMDKKIRDHQASNIPLNR 224

Query: 233 -----DVAKAQVLLFESPAAS 248
                ++     +L  S  A+
Sbjct: 225 FAQPEEMTGQ-AILLLSDHAT 244

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 37.5 bits (85), Expect = 0.002
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 12 VCVTGANGFIGTWLVKTLLDNN 33
          V V G  G+IG+  V+ LL + 
Sbjct: 5  VLVCGGAGYIGSHFVRALLRDT 26

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 37.0 bits (85), Expect = 0.002
 Identities = 49/261 (18%), Positives = 81/261 (31%), Gaps = 48/261 (18%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYT-SINATVFPGSDSSHLFALPGAGDANLRVFEADVL 69
            V +TG    +G      L       S+      G ++S    L  A DA +    ADV 
Sbjct: 6   VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVS 65

Query: 70  DSGAVSRAVEGCK-------GVFHVASPCTLEDPVDPEKELILPAVQ---------GTLN 113
           D   V   V           G F+ A     ++P +         V          G   
Sbjct: 66  DEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEK 125

Query: 114 VLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEK 173
           VL+  +  G   VV T+S+  I              +   +               L   
Sbjct: 126 VLKIMREQGSGMVVNTASVGGIRGIGNQ---SGYAAAKHGVVG-------------LTRN 169

Query: 174 AAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK- 232
           +A E+  ++G+ + AI P     P+++         ++QL   +       ++   P K 
Sbjct: 170 SAVEYG-RYGIRINAIAPGAIWTPMVE-------NSMKQLDPENPRKAAEEFIQVNPSKR 221

Query: 233 -----DVAKAQVLLFESPAAS 248
                ++A   V    S  AS
Sbjct: 222 YGEAPEIAAV-VAFLLSDDAS 241

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 36.2 bits (83), Expect = 0.003
 Identities = 39/248 (15%), Positives = 62/248 (25%), Gaps = 26/248 (10%)

Query: 14  VTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGA 73
           VTGA   IG  + + L                  + L  L  AG         DV     
Sbjct: 7   VTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG-VEADGRTCDVRSVPE 65

Query: 74  VSRAVEGCK---GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS 130
           +   V       G   V              EL        +           ++V+   
Sbjct: 66  IEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVL--- 122

Query: 131 SISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK----TLAEKAAWEFAEKHGVDV 186
                              + T  +        Y  SK       +    E A + G+ V
Sbjct: 123 ---KAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELA-RTGITV 178

Query: 187 VAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK------DVAKAQVL 240
            A+ P    G +  P   +       + + S +         VP+       +VA+  V 
Sbjct: 179 NAVCP----GFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEM-VA 233

Query: 241 LFESPAAS 248
               P A+
Sbjct: 234 YLIGPGAA 241

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 36.1 bits (83), Expect = 0.003
 Identities = 32/260 (12%), Positives = 66/260 (25%), Gaps = 54/260 (20%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
              +TG    IG  +    ++     +              ++        + F+ D  D
Sbjct: 8   VAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQI--QFFQHDSSD 65

Query: 71  SGAVSRAVEGCKGVF-----------HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAK 119
               ++  +  +  F              +    E      ++L+   + G         
Sbjct: 66  EDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGI 125

Query: 120 RFGVRR-----VVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKA 174
           +    +     ++  SSI   V +P                Y  S+     +SK+ A   
Sbjct: 126 QRMKNKGLGASIINMSSIEGFVGDPSLGA------------YNASKGAVRIMSKSAA--L 171

Query: 175 AWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK-- 232
                  + V V  +HP     PL+     A               +        P+   
Sbjct: 172 DCALK-DYDVRVNTVHPGYIKTPLVDDLPGA--------------EEAMSQRTKTPMGHI 216

Query: 233 ----DVAKAQVLLFESPAAS 248
               D+A    +   S  + 
Sbjct: 217 GEPNDIAYI-CVYLASNESK 235

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 35.8 bits (82), Expect = 0.004
 Identities = 42/258 (16%), Positives = 73/258 (28%), Gaps = 46/258 (17%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG--AGDANLRVFEADV 68
              +TG  G IG    K  +          V       H   +         +     DV
Sbjct: 8   VAIITGGAGGIGETTAKLFVRYGAK----VVIADIADDHGQKVCNNIGSPDVISFVHCDV 63

Query: 69  LDSGAVSRAVEGCKGVF-------------HVASPCTLEDPVDPEKELILPAVQGTLNVL 115
                V   V+                          LE   +  K ++   V G   V 
Sbjct: 64  TKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVA 123

Query: 116 EAAKRFGVRR----VVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLA 171
           + A R  +      +V T+SIS+     G               Y  ++     ++ +L 
Sbjct: 124 KHAARVMIPAKKGSIVFTASISSFTAGEGVSHV-----------YTATKHAVLGLTTSL- 171

Query: 172 EKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP- 230
                E   ++G+ V  + P     PL+        + +++L       Q  +  G +  
Sbjct: 172 ---CTELG-EYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAH-----QAANLKGTLLR 222

Query: 231 VKDVAKAQVLLFESPAAS 248
            +DVA A V       + 
Sbjct: 223 AEDVADA-VAYLAGDESK 239

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 35.7 bits (82), Expect = 0.004
 Identities = 36/244 (14%), Positives = 68/244 (27%), Gaps = 27/244 (11%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
           TV +TG    +G    +  +          V          A         R    DV  
Sbjct: 7   TVIITGGARGLGAEAARQAVAAGAR----VVLADVLDEEGAATARELGDAARYQHLDVTI 62

Query: 71  SGAVSRAVEGCK---GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVV 127
                R V   +   G                 +   +   +  + +       G++ V+
Sbjct: 63  EEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVI 122

Query: 128 ---VTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGV 184
                +   +IV      G +    + +   Y  S+     +SK      A E      +
Sbjct: 123 PAMKDAGGGSIVNISSAAGLMGLALTSS---YGASKWGVRGLSKLA----AVELG-TDRI 174

Query: 185 DVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFES 244
            V ++HP     P+             +  +G+        +G  P  ++A A V+   S
Sbjct: 175 RVNSVHPGMTYTPMTA-------ETGIRQGEGNYPNTPMGRVGNEP-GEIAGA-VVKLLS 225

Query: 245 PAAS 248
             +S
Sbjct: 226 DTSS 229

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 35.8 bits (82), Expect = 0.004
 Identities = 38/258 (14%), Positives = 72/258 (27%), Gaps = 49/258 (18%)

Query: 11  TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD 70
              VTG +  +G  + + L +   + + A+      S     L          F  DV +
Sbjct: 7   VALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN 66

Query: 71  SGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELIL----------PAVQGTLNVLEAAKR 120
              V + +E  K  F           +D      +          PA +  L+       
Sbjct: 67  YEEVKKLLEAVKEKF---------GKLD-----TVVNAAGINRRHPAEEFPLDEFRQVIE 112

Query: 121 FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK----TLAEKAAW 176
             +         +  +        + +  S T  E        Y  SK    +L +  A 
Sbjct: 113 VNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAK 172

Query: 177 EFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVK---- 232
           E+  ++G+ V  I P      + +                S   +  + L  +P+     
Sbjct: 173 EWG-RYGIRVNVIAPGWYRTKMTEAVF-------------SDPEKLDYMLKRIPLGRTGV 218

Query: 233 --DVAKAQVLLFESPAAS 248
             D+     +   S  A 
Sbjct: 219 PEDLKGV-AVFLASEEAK 235

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	307
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	100.0
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	100.0
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	100.0
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.97
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.97
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.97
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.97
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.97
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.96
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.95
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.95
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.95
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.95
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.95
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.95
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.95
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.95
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.95
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.95
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.95
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.95
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.95
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.95
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.95
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.95
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.95
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.95
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.95
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.94
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.94
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.94
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.94
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.94
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.94
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.94
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.94
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.94
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.94
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.94
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.94
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.93
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.93
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.93
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.93
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.93
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.93
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.93
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.93
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.93
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.93
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.92
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.92
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.92
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.92
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.92
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.92
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.92
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.91
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.91
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.91
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.9
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.9
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.89
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.89
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.89
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.89
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.88
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.88
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.88
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.87
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.87
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.87
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.86
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.86
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.84
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.84
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.8
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.79
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.79
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.78
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.75
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.45
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.63
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.59
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	98.32
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	98.29
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.28
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.25
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.23
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.22
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.21
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	98.01
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.98
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.93
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.92
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.91
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.9
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.86
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.85
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.84
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.8
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.76
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.76
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.75
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.74
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.74
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.71
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.7
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.7
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.68
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.67
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.67
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.65
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.65
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.64
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.63
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.61
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.6
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.57
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.52
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.52
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.48
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.42
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.41
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.39
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.38
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.37
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.36
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.36
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.36
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.32
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.32
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.32
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.31
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	97.28
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.28
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.22
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.18
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.18
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.16
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.11
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.09
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	97.08
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.07
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.04
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.01
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	96.99
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.98
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.97
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	96.88
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.87
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.82
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.78
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.77
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	96.76
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	96.73
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.71
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	96.71
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	96.69
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.63
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	96.54
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.53
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	96.5
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.41
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	96.37
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.29
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.28
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.24
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.22
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.2
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	96.18
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.11
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.08
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.06
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.99
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.97
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.95
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	95.95
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	95.94
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	95.87
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.8
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	95.78
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.71
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.68
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	95.64
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	95.57
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.56
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	95.55
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.54
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.54
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.49
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.45
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.42
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.4
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.33
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.26
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.25
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	95.23
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	95.23
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	95.21
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.13
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.0
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	94.9
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	94.9
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	94.86
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	94.86
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	94.84
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	94.72
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	94.55
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	94.54
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.49
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	94.35
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.32
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	94.21
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	94.21
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	94.2
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	94.18
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	94.17
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.95
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	93.93
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	93.91
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	93.82
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	93.78
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	93.6
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	93.49
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	93.46
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	93.42
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	93.08
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.07
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	92.95
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	92.9
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	92.82
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	92.73
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	92.64
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	92.5
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	92.29
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	92.15
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	92.08
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	91.69
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	91.49
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	91.45
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	91.13
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	91.06
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	90.98
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	90.66
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	90.63
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	90.61
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	90.52
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	90.38
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	90.11
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	90.11
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	89.99
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	89.9
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	89.65
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	89.0
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	88.96
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	88.92
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	88.92
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	88.8
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	88.76
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	88.4
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	88.26
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	88.16
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	87.37
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	87.32
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	87.2
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	86.73
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	86.54
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	86.53
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	86.47
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	86.19
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	85.95
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	85.46
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	85.38
d1ofua1	198	Cell-division protein FtsZ {Pseudomonas aeruginosa	85.36
d1xk7a1	402	Crotonobetainyl-CoA:carnitine CoA-transferase, Cai	84.92
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	84.38
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	83.98
d1rq2a1	198	Cell-division protein FtsZ {Mycobacterium tubercul	83.73
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	83.53
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	82.7
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	82.32
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	81.98
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	81.84
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	81.83
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	81.33
d1p3y1_	183	MrsD {Bacillus sp. hil-y85/54728 [TaxId: 69002]}	80.94
d1np3a2	182	Class I ketol-acid reductoisomerase (KARI) {Pseudo	80.47
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	80.21

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.9e-40  Score=289.35  Aligned_cols=251  Identities=17%  Similarity=0.192  Sum_probs=198.1

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC--Cc---ccccCCCCCCCceEEEEcccCChhHHHHHhcC--cc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SS---HLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CK   82 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~--~~---~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~--~d   82 (307)
                      |+|||||||||||++|+++|+++|+ +|++++|....  ..   .+.........+++++++|++|.+++.+++++  +|
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCC
Confidence            6899999999999999999999999 99999995432  11   11111111223799999999999999999984  59


Q ss_pred             EEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCC---cEEEEecCcceeccCCCCCCcccccCCCCchhhhcc
Q 021819           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV---RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKS  159 (307)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~  159 (307)
                      +|||+|+......+..++...+++|+.||.+|+++|++.++   .+|||+||. .+|+.+.  ..+++|+++..|.    
T Consensus        81 ~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~-~vYG~~~--~~~~~E~~~~~P~----  153 (357)
T d1db3a_          81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTS-ELYGLVQ--EIPQKETTPFYPR----  153 (357)
T ss_dssp             EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEG-GGGTTCC--SSSBCTTSCCCCC----
T ss_pred             EEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEch-hhhCCCC--CCCcCCCCCCCCC----
Confidence            99999998877666677788999999999999999998764   479999985 4676544  3689999987664    


Q ss_pred             cCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC--CcchHHHHHHHHcCCCCCC----CCcccCcccHHH
Q 021819          160 RKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY--LNASCAVLQQLLQGSKDTQ----EYHWLGAVPVKD  233 (307)
Q Consensus       160 ~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~d  233 (307)
                        ++|+.+|.++|++++.+++.++++++++||++||||.....  ...+...+.....+....+    +.+.++++|++|
T Consensus       154 --~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D  231 (357)
T d1db3a_         154 --SPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKD  231 (357)
T ss_dssp             --SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHH
T ss_pred             --ChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeech
Confidence              78999999999999999999999999999999999976443  2344555556666555332    447889999999


Q ss_pred             HHHHHHHhhcCCCCCceEEe-cCCcccHHHHHHHHHHhC
Q 021819          234 VAKAQVLLFESPAASGRYLC-TNGIYQFGDFAERVSKLF  271 (307)
Q Consensus       234 va~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~  271 (307)
                      +|++++.+++++ ..+.|++ +++.+++.|+++.+.+.+
T Consensus       232 ~~~a~~~~~~~~-~~~~yni~sg~~~s~~~~~~~~~~~~  269 (357)
T d1db3a_         232 YVKMQWMMLQQE-QPEDFVIATGVQYSVRQFVEMAAAQL  269 (357)
T ss_dssp             HHHHHHHTTSSS-SCCCEEECCCCCEEHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhCC-CCCeEEECCCCceehHHHHHHHHHHh
Confidence            999999999875 3466765 567899999999999988

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=1.4e-38  Score=274.73  Aligned_cols=255  Identities=21%  Similarity=0.264  Sum_probs=206.4

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCC-----CeEEEEeCCC--CCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCcc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNY-----TSINATVFPG--SDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCK   82 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~-----~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d   82 (307)
                      |||||||||||||++|++.|+++|+     .+|+++++..  .....+.....  ..++.++.+|+.+..........+|
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~d   78 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDA--DPRLRFVHGDIRDAGLLARELRGVD   78 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTT--CTTEEEEECCTTCHHHHHHHTTTCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhc--CCCeEEEEeccccchhhhccccccc
Confidence            4899999999999999999999987     2344454422  12222222211  1279999999999999999999999


Q ss_pred             EEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCc
Q 021819           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (307)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (307)
                      .|+|+|+............+.+++|+.|+.+++++|.+.++++|||+||.+ +|+...  ..+++|+++..|.      +
T Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~-~yg~~~--~~~~~E~~~~~p~------~  149 (322)
T d1r6da_          79 AIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQ-VYGSID--SGSWTESSPLEPN------S  149 (322)
T ss_dssp             EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGG-GGCCCS--SSCBCTTSCCCCC------S
T ss_pred             eEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecce-eecCCC--CCCCCCCCCCCCC------C
Confidence            999999876543333445788899999999999999999999999999955 455444  3678999987775      6


Q ss_pred             cHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC---CCcccCcccHHHHHHHHH
Q 021819          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQV  239 (307)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~dva~~~~  239 (307)
                      +|+.+|.++|.+++.++++++++++++||++||||.+... ..+..++.+...++++.+   +.+.++|+|++|+|++++
T Consensus       150 ~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~-~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~  228 (322)
T d1r6da_         150 PYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIA  228 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT-SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcC-cHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHH
Confidence            8999999999999999999999999999999999987654 567788888888887654   458899999999999999


Q ss_pred             HhhcCCCCCceEEec-CCcccHHHHHHHHHHhCCCCCCC
Q 021819          240 LLFESPAASGRYLCT-NGIYQFGDFAERVSKLFPEFPVH  277 (307)
Q Consensus       240 ~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  277 (307)
                      .+++++..++.|+++ +++.++.++++.+.+.+ +.+.+
T Consensus       229 ~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~-~~~~~  266 (322)
T d1r6da_         229 LVLAGGRAGEIYHIGGGLELTNRELTGILLDSL-GADWS  266 (322)
T ss_dssp             HHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHH-TCCGG
T ss_pred             HHHhCCCCCCeeEEeecccchhHHHHHHHHHHh-CCCcc
Confidence            999998877788765 57799999999999998 44433

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-38  Score=273.52  Aligned_cols=248  Identities=22%  Similarity=0.286  Sum_probs=189.7

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC-CcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      |||||||||||||++|+++|+++|+ +|++++|.... ...+......  .++.+...|+     ++.++.++|+|||+|
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~~--~~~d~~~~~~-----~~~~~~~~d~VihlA   73 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIGH--ENFELINHDV-----VEPLYIEVDQIYHLA   73 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCGGGTGGGTTC--TTEEEEECCT-----TSCCCCCCSEEEECC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCCcCCHHHHHHhcCC--CceEEEehHH-----HHHHHcCCCEEEECc
Confidence            7999999999999999999999999 99999873322 2222222111  1444554444     444567899999999


Q ss_pred             cCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHH
Q 021819           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (307)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (307)
                      +.........++.+.+++|+.|+.+++++|++.++ ++||+||.+ +|+....  .+++|+.+.... +..+.++|+.+|
T Consensus        74 a~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~-vy~~~~~--~~~~e~~~~~~~-~~~p~~~Y~~sK  148 (312)
T d2b69a1          74 SPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSE-VYGDPEV--HPQSEDYWGHVN-PIGPRACYDEGK  148 (312)
T ss_dssp             SCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGG-GGBSCSS--SSBCTTCCCBCC-SSSTTHHHHHHH
T ss_pred             ccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChh-eecCCCC--CCCCccccCCCC-CCCCccHHHHHH
Confidence            97654333455678899999999999999999986 799999955 5654432  455555432211 112236899999


Q ss_pred             HHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC-CcchHHHHHHHHcCCCCCC---CCcccCcccHHHHHHHHHHhhcC
Q 021819          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY-LNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQVLLFES  244 (307)
Q Consensus       169 ~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~dva~~~~~~~~~  244 (307)
                      .++|.+++.+++.++++++++||++||||..... ...+..++.+...++++.+   +.+.++++|++|++++++.+++.
T Consensus       149 ~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~  228 (312)
T d2b69a1         149 RVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS  228 (312)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhh
Confidence            9999999999999999999999999999987654 3467788888888887654   44789999999999999998876


Q ss_pred             CCCCceEEec-CCcccHHHHHHHHHHhC
Q 021819          245 PAASGRYLCT-NGIYQFGDFAERVSKLF  271 (307)
Q Consensus       245 ~~~~g~~~~~-~~~~~~~~~~~~~~~~~  271 (307)
                      .. .+.|+++ +...++.++++.+.+.+
T Consensus       229 ~~-~~~~n~~~~~~~~~~~~~~~i~~~~  255 (312)
T d2b69a1         229 NV-SSPVNLGNPEEHTILEFAQLIKNLV  255 (312)
T ss_dssp             SC-CSCEEESCCCEEEHHHHHHHHHHHH
T ss_pred             cc-CCceEecCCcccchhhHHHHHHHHh
Confidence            54 4667654 67899999999999988

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=1.1e-37  Score=273.04  Aligned_cols=252  Identities=19%  Similarity=0.212  Sum_probs=194.9

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC--CcccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVF   85 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~vi   85 (307)
                      |||||||||||||++|+++|+++|+..|+++++....  ...+..+..  ..+++++.+|++|.+.+.++++  ++|+||
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi   78 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISE--SNRYNFEHADICDSAEITRIFEQYQPDAVM   78 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTT--CTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhh--cCCcEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence            4899999999999999999999999556666653222  222332221  2289999999999999999887  589999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcC---------CcEEEEecCcceeccCCCC--------CCccccc
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFG---------VRRVVVTSSISAIVPNPGW--------KGKVFDE  148 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~v~iSS~~~~~~~~~~--------~~~~~~E  148 (307)
                      |+|+.........++...+++|+.|+.+++++|++.+         +++|||+||.. +|+....        ......|
T Consensus        79 hlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~-vyg~~~~~~~~~~~~~~~~~~e  157 (361)
T d1kewa_          79 HLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDE-VYGDLPHPDEVENSVTLPLFTE  157 (361)
T ss_dssp             ECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGG-GGCCCCCGGGSCTTSCCCCBCT
T ss_pred             ECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccce-eeCCCccCCccccccCCCCccc
Confidence            9999765432233457889999999999999998753         35899999955 4543321        0111223


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC---CCcc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHW  225 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~  225 (307)
                      .++..|      .+.|+.+|.++|.+++.++++++++++++||++||||.+... ..+..++.++..++++.+   +.+.
T Consensus       158 ~~~~~p------~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~-~~i~~~i~~~~~g~~~~v~g~g~~~  230 (361)
T d1kewa_         158 TTAYAP------SSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQI  230 (361)
T ss_dssp             TSCCCC------CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHHTCCEEEETTSCCE
T ss_pred             CCCCCC------CCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcC-cHHHHHHHHHHcCCCcEEeCCCCeE
Confidence            333333      367999999999999999999999999999999999987553 567788888899887654   4588


Q ss_pred             cCcccHHHHHHHHHHhhcCCCCCceEEec-CCcccHHHHHHHHHHhC
Q 021819          226 LGAVPVKDVAKAQVLLFESPAASGRYLCT-NGIYQFGDFAERVSKLF  271 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~  271 (307)
                      ++|+|++|+|+++..+++++..++.|+++ ++..++.|+++.+.+.+
T Consensus       231 r~~i~v~D~a~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~  277 (361)
T d1kewa_         231 RDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLL  277 (361)
T ss_dssp             EEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHH
T ss_pred             EeCEEHHHHHHHHHHHHhcCCCCCeEEECCCCCcchHHHHhHhhhhc
Confidence            99999999999999999988777788765 56799999999887654

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=3.8e-36  Score=262.03  Aligned_cols=253  Identities=17%  Similarity=0.248  Sum_probs=196.0

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCC--C--CCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP--G--SDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~--~--~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~   83 (307)
                      +||+|||||||||||++|+++|+++|+ +|.++.++  .  ..........   ..++.++.+|++|.+.+..++.++|.
T Consensus         1 ~~mkILVTGgtGfIGs~lv~~L~~~g~-~v~v~~~d~~~~~~~~~~~~~~~---~~~i~~~~~Di~d~~~~~~~~~~~~~   76 (346)
T d1oc2a_           1 QFKNIIVTGGAGFIGSNFVHYVYNNHP-DVHVTVLDKLTYAGNKANLEAIL---GDRVELVVGDIADAELVDKLAAKADA   76 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHCT-TCEEEEEECCCTTCCGGGTGGGC---SSSEEEEECCTTCHHHHHHHHTTCSE
T ss_pred             CcCEEEEeCCCcHHHHHHHHHHHHCCC-CeEEEEEeCCCccccHHHHHHhh---cCCeEEEEccCCCHHHHHHHHhhhhh
Confidence            378999999999999999999999998 54444332  1  1111222221   12899999999999999999999999


Q ss_pred             EEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCC----------CCcccccCCCCc
Q 021819           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW----------KGKVFDETSWTD  153 (307)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~----------~~~~~~E~~~~~  153 (307)
                      |+|+|+.........++.+.+++|+.|+.+++++|...+. ++|++||.. +|+....          .....+|+++..
T Consensus        77 v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~-k~i~~ss~~-vyg~~~~~~~~~~~~~~~~~~~~e~~~~~  154 (346)
T d1oc2a_          77 IVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDE-VYGDLPLREDLPGHGEGPGEKFTAETNYN  154 (346)
T ss_dssp             EEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGG-GGCCBCCGGGSTTTTCSTTSSBCTTSCCC
T ss_pred             hhhhhhcccccchhhCcccceeeehHhHHhhhhhhccccc-cccccccce-EecccCccccccccccCcccccccCCCCC
Confidence            9999988665333334568899999999999999999984 789998865 4542111          123445555444


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC---CCcccCccc
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ---EYHWLGAVP  230 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~  230 (307)
                      |.      +.|+.+|.++|.+++.++++++++++++||++||||..... ..+..++.....+.+..+   +.+.++++|
T Consensus       155 p~------s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~-~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~  227 (346)
T d1oc2a_         155 PS------SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKPKLYGEGKNVRDWIH  227 (346)
T ss_dssp             CC------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-SHHHHHHHHHHHTCCCEEETTSCCEEECEE
T ss_pred             CC------CHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCcc-chhHHHHHHHHcCCceeEeCCCCccccccc
Confidence            43      78999999999999999999999999999999999876544 455666777777776543   458999999


Q ss_pred             HHHHHHHHHHhhcCCCCCceEEe-cCCcccHHHHHHHHHHhCCC
Q 021819          231 VKDVAKAQVLLFESPAASGRYLC-TNGIYQFGDFAERVSKLFPE  273 (307)
Q Consensus       231 ~~dva~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~  273 (307)
                      ++|+|++++.+++++..++.|++ +++..++.++++.+.+.++.
T Consensus       228 v~D~a~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  271 (346)
T d1oc2a_         228 TNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQ  271 (346)
T ss_dssp             HHHHHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTC
T ss_pred             hhhHHHHHHHHHhhcccCccccccccccccchHHHHHHHHHhCC
Confidence            99999999999998888887654 56789999999999999843

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=3.4e-36  Score=261.76  Aligned_cols=255  Identities=18%  Similarity=0.161  Sum_probs=205.3

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCc-cc---ccCC-CCCCCceEEEEcccCChhHHHHHhcCcc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS-HL---FALP-GAGDANLRVFEADVLDSGAVSRAVEGCK   82 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~---~~~~-~~~~~~~~~i~~D~~d~~~~~~~~~~~d   82 (307)
                      +.|+|||||||||||++|+++|+++|+ +|++++|...... ..   ..+. .....+++++.+|+.|..........++
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~   93 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD   93 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccccccc
Confidence            467999999999999999999999999 9999987433211 11   1110 0011168999999999999998889999


Q ss_pred             EEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCc
Q 021819           83 GVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKK  162 (307)
Q Consensus        83 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  162 (307)
                      .++|+++.........++...+++|+.|+.+++++|++.++++|||+||.+ +|+...  ..+++|+++..|.      +
T Consensus        94 ~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~-vyg~~~--~~~~~E~~~~~p~------~  164 (341)
T d1sb8a_          94 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSS-TYGDHP--GLPKVEDTIGKPL------S  164 (341)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGG-GGTTCC--CSSBCTTCCCCCC------S
T ss_pred             ccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccce-eeCCCC--CCCccCCCCCCCC------C
Confidence            999999876543334456789999999999999999999999999999966 455443  3679999987775      7


Q ss_pred             cHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC---CcchHHHHHHHHcCCCCCC---CCcccCcccHHHHHH
Q 021819          163 WYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAK  236 (307)
Q Consensus       163 ~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~dva~  236 (307)
                      .|+.+|.++|.+++.+++..+++++++||++|||+.....   ...+..++.+...++++.+   +.+.++|+|++|++.
T Consensus       165 ~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~  244 (341)
T d1sb8a_         165 PYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQ  244 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccch
Confidence            8999999999999999999999999999999999976543   3456677888888887654   347899999999999


Q ss_pred             HHHHhhcCCCC--CceEEec-CCcccHHHHHHHHHHhCC
Q 021819          237 AQVLLFESPAA--SGRYLCT-NGIYQFGDFAERVSKLFP  272 (307)
Q Consensus       237 ~~~~~~~~~~~--~g~~~~~-~~~~~~~~~~~~~~~~~~  272 (307)
                      ++..++..+..  ++.|+++ ++..++.++++.+.+.++
T Consensus       245 a~~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~  283 (341)
T d1sb8a_         245 ANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLA  283 (341)
T ss_dssp             HHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHH
T ss_pred             hhhhhhhccccccceeeeecccccchHHHHHHHHHHHhc
Confidence            99998876543  3467765 577999999999998873

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=4.2e-36  Score=259.00  Aligned_cols=250  Identities=18%  Similarity=0.146  Sum_probs=196.6

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC--cccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVF   85 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~vi   85 (307)
                      |+|||||||||||++|+++|+++|+ +|++++|.....  ..+..+...  .+++++.+|++|.+.+.+.+.  ..++++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~l~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~   77 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGIE--GDIQYEDGDMADACSVQRAVIKAQPQEVY   77 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTCG--GGEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcccHHHHHHhccc--CCcEEEEccccChHHhhhhhccccccccc
Confidence            6899999999999999999999999 999999965432  223332211  278999999999999988876  467888


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccH
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (307)
                      |+|+..............++.|+.|+.+++++|++.+.+ +|++.|| .++|+....  ...+|+++..|.      ++|
T Consensus        78 ~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss-~~~~~~~~~--~~~~E~~~~~p~------~~Y  148 (321)
T d1rpna_          78 NLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQAST-SEMFGLIQA--ERQDENTPFYPR------SPY  148 (321)
T ss_dssp             ECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEE-GGGGCSCSS--SSBCTTSCCCCC------SHH
T ss_pred             cccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccc-hhhcCcccC--CCCCCCCCcccc------Chh
Confidence            888776654445566788999999999999999998865 5666665 556665443  667888877665      789


Q ss_pred             HHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCC--cchHHHHHHHHcCCCCC--C--CCcccCcccHHHHHHHH
Q 021819          165 PVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKDT--Q--EYHWLGAVPVKDVAKAQ  238 (307)
Q Consensus       165 ~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~--~--~~~~~~~i~~~dva~~~  238 (307)
                      +.+|.++|.+++.+++.++++++++||+++|||......  +.+..++.+...++...  .  +.+.++|+|++|+|+++
T Consensus       149 ~~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~  228 (321)
T d1rpna_         149 GVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAM  228 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHH
Confidence            999999999999999999999999999999999754432  23445555555554432  2  44789999999999999


Q ss_pred             HHhhcCCCCCceEEecCCcccHHHHHHHHHHhC
Q 021819          239 VLLFESPAASGRYLCTNGIYQFGDFAERVSKLF  271 (307)
Q Consensus       239 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  271 (307)
                      ..+++++.....++.+++..++.++++.+.+.+
T Consensus       229 ~~~~~~~~~~~~ni~~~~~~s~~~~~~~~~~~~  261 (321)
T d1rpna_         229 WLMLQQDKADDYVVATGVTTTVRDMCQIAFEHV  261 (321)
T ss_dssp             HHHHHSSSCCCEEECCSCEEEHHHHHHHHHHTT
T ss_pred             HHHHhcCCcCCceecccccceehhhhHHHHHHh
Confidence            999998765443445678899999999999988

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=100.00  E-value=1.2e-35  Score=258.46  Aligned_cols=270  Identities=27%  Similarity=0.355  Sum_probs=204.0

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCC--CCCCCceEEEEcccCChhHHHHHhcCccEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP--GAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~i~~D~~d~~~~~~~~~~~d~v   84 (307)
                      .++|+|||||||||||++|+++|+++|+ +|++++|+..+...+....  .........+.+|+.|.+++.+++.++|+|
T Consensus         9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~-~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v   87 (342)
T d1y1pa1           9 PEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV   87 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred             CCcCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhh
Confidence            3589999999999999999999999999 9999999765443332110  001113456779999999999999999999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhc-CCcEEEEecCcceeccCCCC-CCcccccCCCCchhh------
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-GVRRVVVTSSISAIVPNPGW-KGKVFDETSWTDLEY------  156 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~iSS~~~~~~~~~~-~~~~~~E~~~~~~~~------  156 (307)
                      +|+++....   .......++.|+.|+.+++++|.+. ++++|||+||+.+.+..... .....+|+.+....+      
T Consensus        88 ~~~a~~~~~---~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  164 (342)
T d1y1pa1          88 AHIASVVSF---SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTL  164 (342)
T ss_dssp             EECCCCCSC---CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHS
T ss_pred             hhhcccccc---cccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccc
Confidence            999997654   3446678899999999999999887 68999999997655443322 234455544322111      


Q ss_pred             ----hcccCccHHHHHHHHHHHHHHHHHhc--CCcEEEEecCceeCCCCCCC--CcchHHHHHHHHcCCCCCC--CCccc
Q 021819          157 ----CKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPY--LNASCAVLQQLLQGSKDTQ--EYHWL  226 (307)
Q Consensus       157 ----~~~~~~~y~~sK~~~e~~~~~~~~~~--~i~~~ivrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~  226 (307)
                          +..+..+|+.+|..+|.+++.+.+++  +++++++||+.++||...+.  ......++..+..+.....  +.+.+
T Consensus       165 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~  244 (342)
T d1y1pa1         165 PESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQ  244 (342)
T ss_dssp             CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSE
T ss_pred             cccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCCccce
Confidence                11122579999999999999988776  57788999999999865433  3456667777777765443  45678


Q ss_pred             CcccHHHHHHHHHHhhcCCCCCce-EEecCCcccHHHHHHHHHHhCCCCCCCccc
Q 021819          227 GAVPVKDVAKAQVLLFESPAASGR-YLCTNGIYQFGDFAERVSKLFPEFPVHRFV  280 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (307)
                      +|+|++|+|++++.+++++...|. |+++++.+++.|+++.+.+.+|..+++...
T Consensus       245 ~~v~v~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia~~i~k~~p~~~~~~~~  299 (342)
T d1y1pa1         245 YYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADF  299 (342)
T ss_dssp             EEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCCCC
T ss_pred             eeeeHHHHHHHHHHhhcCccccceEEEEcCCceEHHHHHHHHHHHcCCCcCCccC
Confidence            899999999999999999887776 456678899999999999999877766543

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=3.7e-35  Score=257.34  Aligned_cols=257  Identities=14%  Similarity=0.109  Sum_probs=190.6

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      .|||||||||||||++|+++|+++|+ +|+++++...........      ..++..+|+.+.+.+.++++++|+|||+|
T Consensus        15 nMKILVTGgsGfIGs~lv~~L~~~g~-~V~~~d~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~d~Vih~a   87 (363)
T d2c5aa1          15 NLKISITGAGGFIASHIARRLKHEGH-YVIASDWKKNEHMTEDMF------CDEFHLVDLRVMENCLKVTEGVDHVFNLA   87 (363)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCSSSCGGGT------CSEEEECCTTSHHHHHHHHTTCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCCccchhhhcc------cCcEEEeechhHHHHHHHhhcCCeEeecc
Confidence            46899999999999999999999999 999998754443222111      56788899999999999999999999999


Q ss_pred             cCCCCCC-CCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCc-hhhhcccCccHHH
Q 021819           89 SPCTLED-PVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD-LEYCKSRKKWYPV  166 (307)
Q Consensus        89 ~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~-~~~~~~~~~~y~~  166 (307)
                      +...... ........+..|+.++.+++++|++.++++||++||...+.....   .+.+|+.... ...+..+.++|+.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~---~~~~~~~~~~~e~~~~~p~~~Yg~  164 (363)
T d2c5aa1          88 ADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQ---LETTNVSLKESDAWPAEPQDAFGL  164 (363)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGS---SSSSSCEECGGGGSSBCCSSHHHH
T ss_pred             cccccccccccccccccccccchhhHHHHhHHhhCcccccccccccccccccc---ccccccccccccCCcCCCCCHHHH
Confidence            8765421 134567889999999999999999999999999999665433222   2222222111 1112223478999


Q ss_pred             HHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCC---cchHHHH-HHHHcCCCCC-C--CCcccCcccHHHHHHHHH
Q 021819          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL---NASCAVL-QQLLQGSKDT-Q--EYHWLGAVPVKDVAKAQV  239 (307)
Q Consensus       167 sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~---~~~~~~~-~~~~~~~~~~-~--~~~~~~~i~~~dva~~~~  239 (307)
                      +|.++|.+++.+.+.++++++++||+++||+.+....   ....... .......+.. .  +.+.++|+|++|+++++.
T Consensus       165 sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~  244 (363)
T d2c5aa1         165 EKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVL  244 (363)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHH
Confidence            9999999999999999999999999999998765432   1122222 2222222222 2  347899999999999999


Q ss_pred             HhhcCCCCCceEEe-cCCcccHHHHHHHHHHhCCCCCCC
Q 021819          240 LLFESPAASGRYLC-TNGIYQFGDFAERVSKLFPEFPVH  277 (307)
Q Consensus       240 ~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  277 (307)
                      .+++++ ..+.|++ ++..+++.++++.+.+.. +.+.+
T Consensus       245 ~~~~~~-~~~~~ni~~~~~~s~~~l~~~i~~~~-g~~~~  281 (363)
T d2c5aa1         245 RLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFE-EKKLP  281 (363)
T ss_dssp             HHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTT-TCCCC
T ss_pred             HHHhCC-CCCeEEEecCCcccHHHHHHHHHHHh-CCCCc
Confidence            999865 4466765 568899999999999988 44433

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-35  Score=255.96  Aligned_cols=252  Identities=17%  Similarity=0.136  Sum_probs=191.3

Q ss_pred             cEE-EEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC--cccccC----CCCCCCceEEEEcccCChhHHHHHhc--C
Q 021819           10 ETV-CVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFAL----PGAGDANLRVFEADVLDSGAVSRAVE--G   80 (307)
Q Consensus        10 ~~i-lItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~~~~~~----~~~~~~~~~~i~~D~~d~~~~~~~~~--~   80 (307)
                      ||| ||||||||||++|+++|+++|+ +|++++|..+..  ..+..+    ......+++++.+|++|.+.+.+++.  +
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~-~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   79 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGY-EVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVK   79 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhcc
Confidence            467 9999999999999999999999 999999965421  111111    11111278999999999999999986  5


Q ss_pred             ccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCC---cEEEEecCcceeccCCCCCCcccccCCCCchhhh
Q 021819           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV---RRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC  157 (307)
Q Consensus        81 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~  157 (307)
                      +++++|+++..............+++|+.||.+++++|++.++   ++|||+||.+ +|+...  ..+++|+++..|.  
T Consensus        80 ~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~-vyg~~~--~~~~~E~~~~~P~--  154 (347)
T d1t2aa_          80 PTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSE-LYGKVQ--EIPQKETTPFYPR--  154 (347)
T ss_dssp             CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGG-GTCSCS--SSSBCTTSCCCCC--
T ss_pred             cceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchh-eecCCC--CCCCCCCCCCCCC--
Confidence            6899999987654333344567789999999999999999864   4899999854 666543  3678999987764  


Q ss_pred             cccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCC--c-chHHHHHHHHcCCCCC-C--CCcccCcccH
Q 021819          158 KSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--N-ASCAVLQQLLQGSKDT-Q--EYHWLGAVPV  231 (307)
Q Consensus       158 ~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~--~-~~~~~~~~~~~~~~~~-~--~~~~~~~i~~  231 (307)
                          ++|+.||.++|.+++.++++++++++++||+++|||......  . ....++.......+.. .  +.+.++++|+
T Consensus       155 ----~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v  230 (347)
T d1t2aa_         155 ----SPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHA  230 (347)
T ss_dssp             ----SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEH
T ss_pred             ----CHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEe
Confidence                789999999999999999999999999999999999755431  1 1222233333334333 2  4478999999


Q ss_pred             HHHHHHHHHhhcCCCCCceEEecCCcccHHHHHHHHHHhC
Q 021819          232 KDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLF  271 (307)
Q Consensus       232 ~dva~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  271 (307)
                      +|+++++..++++......+...+...++.+..+.+....
T Consensus       231 ~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (347)
T d1t2aa_         231 KDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHI  270 (347)
T ss_dssp             HHHHHHHHHHHHSSSCCCEEECCSCCEEHHHHHHHHHHHT
T ss_pred             cHHHHHHHHHhhcCCCccceeccccccccchhhhhhhhhh
Confidence            9999999999998765443445567789999998888777

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2e-35  Score=256.58  Aligned_cols=258  Identities=18%  Similarity=0.135  Sum_probs=186.9

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCc-ccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEEEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS-HLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~vi~   86 (307)
                      |||||||||||||++|++.|+++|+ +|++++|...... ...........++.++++|++|.+.+.++++  ++|+|||
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViH   79 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGH-DVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIH   79 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEE
Confidence            4799999999999999999999999 9999987322221 1111000011178999999999999999987  7999999


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCC-CchhhhcccCccHH
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW-TDLEYCKSRKKWYP  165 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~-~~~~~~~~~~~~y~  165 (307)
                      +|+.........++.+.+++|+.|+.+++++|++.+++++|++||... |+....  .+..|+++ ..|.      .+|+
T Consensus        80 lAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~v-y~~~~~--~~~~e~~~~~~p~------~~Y~  150 (338)
T d1udca_          80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATV-YGDQPK--IPYVESFPTGTPQ------SPYG  150 (338)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGG-GCSCCS--SSBCTTSCCCCCS------SHHH
T ss_pred             CCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceE-Eccccc--cccccccccCCCc------chHH
Confidence            999755332233456889999999999999999999999999998654 543332  33444443 2332      6899


Q ss_pred             HHHHHHHHHHHHHHHh-cCCcEEEEecCceeCCCCCCC--------C-cchHHHHHHHHcCC-CCCC---------CCcc
Q 021819          166 VSKTLAEKAAWEFAEK-HGVDVVAIHPATCLGPLMQPY--------L-NASCAVLQQLLQGS-KDTQ---------EYHW  225 (307)
Q Consensus       166 ~sK~~~e~~~~~~~~~-~~i~~~ivrp~~v~g~~~~~~--------~-~~~~~~~~~~~~~~-~~~~---------~~~~  225 (307)
                      .+|..+|.++..+.++ .+++++++||++|||+.....        . ..+..++.....+. ++.+         +.+.
T Consensus       151 ~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~  230 (338)
T d1udca_         151 KSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV  230 (338)
T ss_dssp             HHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCE
T ss_pred             HHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCce
Confidence            9999999999876665 489999999999999876432        1 23333444343332 2211         3467


Q ss_pred             cCcccHHHHHHHHHHhhcCCCCC---ceEEec-CCcccHHHHHHHHHHhCCCCCCCc
Q 021819          226 LGAVPVKDVAKAQVLLFESPAAS---GRYLCT-NGIYQFGDFAERVSKLFPEFPVHR  278 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~~~~---g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  278 (307)
                      ++|+|++|++.++..+.......   +.|+++ ++++++.|+++.+.+.+ +.+.+.
T Consensus       231 rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~-g~~~~~  286 (338)
T d1udca_         231 RDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKAC-GKPVNY  286 (338)
T ss_dssp             ECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHH-TSCCCE
T ss_pred             eeEEEEeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHH-CCCCce
Confidence            89999999999887766543322   358775 56799999999999998 444443

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8.9e-35  Score=252.85  Aligned_cols=253  Identities=18%  Similarity=0.244  Sum_probs=191.8

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHH-HhcCccEEEEec
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSR-AVEGCKGVFHVA   88 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~-~~~~~d~vi~~a   88 (307)
                      |||||||||||||++|+++|+++|+.+|+++++.......+...     .+++++++|+++.+++.+ +.+++|+|||+|
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~-----~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a   75 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNH-----PHFHFVEGDISIHSEWIEYHVKKCDVVLPLV   75 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTC-----TTEEEEECCTTTCSHHHHHHHHHCSEEEECB
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccC-----CCeEEEECccCChHHHHHHHHhCCCcccccc
Confidence            48999999999999999999999954899998865443333221     179999999998766555 667899999999


Q ss_pred             cCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhh-hcccCccHHHH
Q 021819           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEY-CKSRKKWYPVS  167 (307)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~-~~~~~~~y~~s  167 (307)
                      +........+.....+.+|+.|+.+++++|.+.+. +++++||... |+....  ...+|..+..+.. ...+...|+.+
T Consensus        76 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss~~~-~~~~~~--~~~~~~~~~~~~~~~~~p~~~Y~~s  151 (342)
T d2blla1          76 AIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSEV-YGMCSD--KYFDEDHSNLIVGPVNKPRWIYSVS  151 (342)
T ss_dssp             CCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECCGGG-GBTCCC--SSBCTTTCCCBCCCTTCGGGHHHHH
T ss_pred             ccccccccccCCccccccccccccccccccccccc-cccccccccc-cccccc--cccccccccccccccCCCcchhhhc
Confidence            98664333334567899999999999999999986 4677787554 443332  3334433222111 11223679999


Q ss_pred             HHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC-------CcchHHHHHHHHcCCCCCC---CCcccCcccHHHHHHH
Q 021819          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY-------LNASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKA  237 (307)
Q Consensus       168 K~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~-------~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~dva~~  237 (307)
                      |.++|.+++.+++.++++++++||+.+||+.....       ......++.+++.++++.+   +.+.++++|++|+|++
T Consensus       152 K~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a  231 (342)
T d2blla1         152 KQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEA  231 (342)
T ss_dssp             HHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHH
T ss_pred             ccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccce
Confidence            99999999999999999999999999999865443       2346777788888887654   3588999999999999


Q ss_pred             HHHhhcCCC--CCc-eEEec-CC-cccHHHHHHHHHHhC
Q 021819          238 QVLLFESPA--ASG-RYLCT-NG-IYQFGDFAERVSKLF  271 (307)
Q Consensus       238 ~~~~~~~~~--~~g-~~~~~-~~-~~~~~~~~~~~~~~~  271 (307)
                      +..+++++.  ..| .||++ ++ .+|+.++++.+.+.+
T Consensus       232 ~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~  270 (342)
T d2blla1         232 LYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASF  270 (342)
T ss_dssp             HHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHH
T ss_pred             eeeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHh
Confidence            999998753  334 68874 44 489999999998887

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.4e-34  Score=249.74  Aligned_cols=251  Identities=16%  Similarity=0.131  Sum_probs=191.7

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC--CcccccCC---C-CCCCceEEEEcccCChhHHHHHhc--Cc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALP---G-AGDANLRVFEADVLDSGAVSRAVE--GC   81 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~--~~~~~~~~---~-~~~~~~~~i~~D~~d~~~~~~~~~--~~   81 (307)
                      |++||||||||||++|+++|+++|+ +|++++|..+.  .+.+..+.   . .....++++.+|+++.+.+.+.++  ++
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~   80 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP   80 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcC-EEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence            7999999999999999999999999 99999995432  11111111   0 011268899999999999998875  67


Q ss_pred             cEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhc-----CCcEEEEecCcceeccCCCCCCcccccCCCCchhh
Q 021819           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF-----GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEY  156 (307)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~  156 (307)
                      |+|||+|+........+.+...+..|+.++.++++++++.     ...++++.|| +.+++...   .+.+|+++..|. 
T Consensus        81 D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss-~~~~~~~~---~~~~E~~~~~p~-  155 (339)
T d1n7ha_          81 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGS-SEMFGSTP---PPQSETTPFHPR-  155 (339)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEE-GGGGTTSC---SSBCTTSCCCCC-
T ss_pred             chhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeeccc-ceecccCC---CCCCCCCCCCCc-
Confidence            9999999986543333455788899999999999999754     2345677665 43444322   568898887765 


Q ss_pred             hcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCC--cchHHHHHHHHcCCCC-C-C--CCcccCccc
Q 021819          157 CKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKD-T-Q--EYHWLGAVP  230 (307)
Q Consensus       157 ~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~-~-~--~~~~~~~i~  230 (307)
                           +.|+.+|..+|.++..+++.++++++++||++||||......  ..+...+.....+... . .  +.+.++++|
T Consensus       156 -----~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~  230 (339)
T d1n7ha_         156 -----SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGF  230 (339)
T ss_dssp             -----SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEE
T ss_pred             -----chhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCcccccee
Confidence                 789999999999999999999999999999999999765432  2233333333333332 2 2  347899999


Q ss_pred             HHHHHHHHHHhhcCCCCCceEEecCCcccHHHHHHHHHHhC
Q 021819          231 VKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLF  271 (307)
Q Consensus       231 ~~dva~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  271 (307)
                      ++|+|+++..+++++...+.++..+.+.++.++++.+.+.+
T Consensus       231 v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~  271 (339)
T d1n7ha_         231 AGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYL  271 (339)
T ss_dssp             HHHHHHHHHHHHTSSSCCEEEECCSCEEEHHHHHHHHHHHT
T ss_pred             eehHHHHHHHHHhcCCCCccccccccccccchhhhhhhhhh
Confidence            99999999999999887777788888999999999999998

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=9.4e-35  Score=257.39  Aligned_cols=261  Identities=18%  Similarity=0.165  Sum_probs=187.7

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCC----------CC---CC----cccccCCCCCCCceEEEEcccCCh
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP----------GS---DS----SHLFALPGAGDANLRVFEADVLDS   71 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~----------~~---~~----~~~~~~~~~~~~~~~~i~~D~~d~   71 (307)
                      +|||||||||||||++|+++|+++|+ +|++++.-          ..   ..    ..+.........+++++++|++|.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~-~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~   79 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNY-EVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDF   79 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCH
Confidence            47999999999999999999999999 99998620          00   00    000000000012789999999999


Q ss_pred             hHHHHHhc--CccEEEEeccCCCCCCCC---ChhhhhhhhhHHHHHHHHHHHHhcCCcE-EEEecCcceeccCCCCC---
Q 021819           72 GAVSRAVE--GCKGVFHVASPCTLEDPV---DPEKELILPAVQGTLNVLEAAKRFGVRR-VVVTSSISAIVPNPGWK---  142 (307)
Q Consensus        72 ~~~~~~~~--~~d~vi~~a~~~~~~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~iSS~~~~~~~~~~~---  142 (307)
                      +.+.++++  ++|+|||+|+......+.   ......+++|+.|+.+++++|++.++++ +++.|| .++++.....   
T Consensus        80 ~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss-~~~~~~~~~~~~~  158 (393)
T d1i24a_          80 EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGT-MGEYGTPNIDIEE  158 (393)
T ss_dssp             HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECC-GGGGCCCSSCBCS
T ss_pred             HHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeeccc-ccccccccccccc
Confidence            99999997  569999999876542221   2235678999999999999999988654 555555 5555543310   


Q ss_pred             -CcccccCCCCch-hhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC----------------Cc
Q 021819          143 -GKVFDETSWTDL-EYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY----------------LN  204 (307)
Q Consensus       143 -~~~~~E~~~~~~-~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~----------------~~  204 (307)
                       ....+|+..... .++..+.++|+.+|.++|.+++.++++++++++++||++|||+.....                ..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  238 (393)
T d1i24a_         159 GYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGT  238 (393)
T ss_dssp             SEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCC
T ss_pred             ccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCcccccccccccccccccccccc
Confidence             011222221110 112233468999999999999999999999999999999999875432                12


Q ss_pred             chHHHHHHHHcCCCCCC---CCcccCcccHHHHHHHHHHhhcCCCCCceE---EecCCcccHHHHHHHHHHhC
Q 021819          205 ASCAVLQQLLQGSKDTQ---EYHWLGAVPVKDVAKAQVLLFESPAASGRY---LCTNGIYQFGDFAERVSKLF  271 (307)
Q Consensus       205 ~~~~~~~~~~~~~~~~~---~~~~~~~i~~~dva~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~  271 (307)
                      .+..++.+...+.++.+   +.+.++|+|++|++++++.+++++...|.+   +.+++.+++.++++.+.+..
T Consensus       239 ~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~  311 (393)
T d1i24a_         239 ALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAG  311 (393)
T ss_dssp             HHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHH
T ss_pred             chhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHH
Confidence            45677778888877664   447899999999999999999988877754   24456789999999888765

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=7.3e-34  Score=247.53  Aligned_cols=261  Identities=15%  Similarity=0.131  Sum_probs=190.0

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC-CcccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEEEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~vi~   86 (307)
                      |.|||||||||||++|+++|+++|+ +|+++++.... .............+++++++|++|.++++++++  ++|+|||
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vih   80 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGY-DCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIH   80 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-eEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEE
Confidence            5799999999999999999999999 99998873322 221111100011178899999999999999886  7899999


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCC-CCcccccCCCCchhhhcccCccHH
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW-KGKVFDETSWTDLEYCKSRKKWYP  165 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~-~~~~~~E~~~~~~~~~~~~~~~y~  165 (307)
                      +|+................+|+.++.+++++|++.++++||++||..+++..... ...+++|+++..|.      ++|+
T Consensus        81 lAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~------~~Y~  154 (347)
T d1z45a2          81 FAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPT------NPYG  154 (347)
T ss_dssp             CCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCC------SHHH
T ss_pred             ccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCC------ChhH
Confidence            9997654333334567889999999999999999999999999997754433221 23567888776665      6899


Q ss_pred             HHHHHHHHHHHHHHHh--cCCcEEEEecCceeCCCCCCC--------CcchHHHHHHHHcC--CCCCC-C--------Cc
Q 021819          166 VSKTLAEKAAWEFAEK--HGVDVVAIHPATCLGPLMQPY--------LNASCAVLQQLLQG--SKDTQ-E--------YH  224 (307)
Q Consensus       166 ~sK~~~e~~~~~~~~~--~~i~~~ivrp~~v~g~~~~~~--------~~~~~~~~~~~~~~--~~~~~-~--------~~  224 (307)
                      .+|.++|.+++.+.+.  .+++++++||+++||+.....        ...+..++.....+  .++.+ +        ..
T Consensus       155 ~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~  234 (347)
T d1z45a2         155 HTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTP  234 (347)
T ss_dssp             HHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSC
T ss_pred             hHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCce
Confidence            9999999999988654  489999999999999765332        12233333333332  22222 1        24


Q ss_pred             ccCcccHHHHHHHHHHhhcCCC-------CCceEEec-CCcccHHHHHHHHHHhCCCCCCCc
Q 021819          225 WLGAVPVKDVAKAQVLLFESPA-------ASGRYLCT-NGIYQFGDFAERVSKLFPEFPVHR  278 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~~-------~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  278 (307)
                      .++++++.|++.+++.+++...       ..+.||++ ++++++.|+++.+.+.+ +.+.+.
T Consensus       235 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~-~~~~~~  295 (347)
T d1z45a2         235 IRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKAS-GIDLPY  295 (347)
T ss_dssp             EECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHH-TCCCCC
T ss_pred             eeeeeeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHH-CCCCce
Confidence            6788999999999888775321       12358765 67899999999999988 555544

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=100.00  E-value=1.1e-32  Score=243.11  Aligned_cols=261  Identities=19%  Similarity=0.187  Sum_probs=188.4

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHH-CCCCeEEEEeC---CCCCCcccc----------c----CCCCCCCceEEEEcccCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLD-NNYTSINATVF---PGSDSSHLF----------A----LPGAGDANLRVFEADVLD   70 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~-~g~~~V~~~~r---~~~~~~~~~----------~----~~~~~~~~~~~i~~D~~d   70 (307)
                      .|||||||||||||++|+++|++ .|+ +|+++++   +........          .    ........+.++.+|++|
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~-~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d   80 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNH-SVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN   80 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCC-EEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCC-EEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccC
Confidence            35999999999999999999996 578 9999875   111111100          0    011112267899999999


Q ss_pred             hhHHHHHhc---CccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCC----CC
Q 021819           71 SGAVSRAVE---GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGW----KG  143 (307)
Q Consensus        71 ~~~~~~~~~---~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~----~~  143 (307)
                      .+.+.++++   ++|+|||+|+........+.....+++|+.++.+++++|++.++++++++||...+......    ..
T Consensus        81 ~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~  160 (383)
T d1gy8a_          81 EDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNA  160 (383)
T ss_dssp             HHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CC
T ss_pred             HHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCcccccccccccccccccccccccc
Confidence            999998885   67999999998665333344567889999999999999999999999999986654433221    12


Q ss_pred             cccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCC--------cchHHHHHHHHc
Q 021819          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL--------NASCAVLQQLLQ  215 (307)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~--------~~~~~~~~~~~~  215 (307)
                      .++.|+++..|.      ++|+.+|..+|.+++.+.+.++++++++||+++|||......        ..++.++.++..
T Consensus       161 ~~~~e~~~~~p~------~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~  234 (383)
T d1gy8a_         161 EPIDINAKKSPE------SPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMS  234 (383)
T ss_dssp             CCBCTTSCCBCS------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHH
T ss_pred             cccccccCCCCC------CHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHh
Confidence            356666665554      789999999999999999999999999999999999876542        122333332221


Q ss_pred             ----C------------CCCC---------CCCcccCcccHHHHHHHHHHhhcCCC---------CCceEEe-cCCcccH
Q 021819          216 ----G------------SKDT---------QEYHWLGAVPVKDVAKAQVLLFESPA---------ASGRYLC-TNGIYQF  260 (307)
Q Consensus       216 ----~------------~~~~---------~~~~~~~~i~~~dva~~~~~~~~~~~---------~~g~~~~-~~~~~~~  260 (307)
                          +            .+..         .+.+.++|+|++|+|++++.+++...         ..+.|++ +++++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~  314 (383)
T d1gy8a_         235 DIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSV  314 (383)
T ss_dssp             HHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEH
T ss_pred             hccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeH
Confidence                1            1111         13367899999999999999886321         1135876 5678999


Q ss_pred             HHHHHHHHHhCCCCCCC
Q 021819          261 GDFAERVSKLFPEFPVH  277 (307)
Q Consensus       261 ~~~~~~~~~~~~~~~~~  277 (307)
                      .|+++.+.+.+ +.+.+
T Consensus       315 ~el~~~i~~~~-~~~~~  330 (383)
T d1gy8a_         315 REVIEVARKTT-GHPIP  330 (383)
T ss_dssp             HHHHHHHHHHH-CCCCC
T ss_pred             HHHHHHHHHHh-CCCCc
Confidence            99999999988 44433

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-32  Score=238.89  Aligned_cols=259  Identities=19%  Similarity=0.159  Sum_probs=183.8

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC-------cccccCCCCCCCceEEEEcccCChhHHHHHhc--C
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-------SHLFALPGAGDANLRVFEADVLDSGAVSRAVE--G   80 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~   80 (307)
                      |||||||||||||++|+++|+++|+ +|++++|.....       ............+++++++|++|.+.+.+++.  +
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~-~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~   81 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGY-LPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTC-CEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccc
Confidence            6899999999999999999999999 999987622111       11111000011278999999999999999886  4


Q ss_pred             ccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhccc
Q 021819           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSR  160 (307)
Q Consensus        81 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  160 (307)
                      +++++|+||..........+.+.+++|+.|+.+++++|++.++++|+|+||+..++.....  ....+.....+      
T Consensus        82 ~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~--~~~~~~~~~~~------  153 (346)
T d1ek6a_          82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYL--PLDEAHPTGGC------  153 (346)
T ss_dssp             EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSS--SBCTTSCCCCC------
T ss_pred             cccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccc--ccccccccccc------
Confidence            5789999997654333334578899999999999999999999999999986654333221  22222222222      


Q ss_pred             CccHHHHHHHHHHHHHHHHHh-cCCcEEEEecCceeCCCCCCC--------C-cchHHHHHHHHcCC-CC---------C
Q 021819          161 KKWYPVSKTLAEKAAWEFAEK-HGVDVVAIHPATCLGPLMQPY--------L-NASCAVLQQLLQGS-KD---------T  220 (307)
Q Consensus       161 ~~~y~~sK~~~e~~~~~~~~~-~~i~~~ivrp~~v~g~~~~~~--------~-~~~~~~~~~~~~~~-~~---------~  220 (307)
                      .++|+.+|..+|..+..+++. .+++.+++||+.+||+.....        . ..+..++....... ++         .
T Consensus       154 ~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~  233 (346)
T d1ek6a_         154 TNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTE  233 (346)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSS
T ss_pred             CChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCC
Confidence            267999999999999888765 599999999999999865431        1 22333333333222 21         1


Q ss_pred             CCCcccCcccHHHHHHHHHHhhcCCCC---CceEEec-CCcccHHHHHHHHHHhCCCCCCCc
Q 021819          221 QEYHWLGAVPVKDVAKAQVLLFESPAA---SGRYLCT-NGIYQFGDFAERVSKLFPEFPVHR  278 (307)
Q Consensus       221 ~~~~~~~~i~~~dva~~~~~~~~~~~~---~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  278 (307)
                      .+.+.++|+|++|+|.++..++.....   .+.|+++ ++.+++.|+++.+.+.+ +.+.+.
T Consensus       234 ~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~-~~~~~~  294 (346)
T d1ek6a_         234 DGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKAS-GKKIPY  294 (346)
T ss_dssp             SSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHH-CSCCCE
T ss_pred             CCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHh-CCCCCe
Confidence            134678999999999998887654332   2368765 57799999999999998 554443

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.9e-32  Score=231.79  Aligned_cols=238  Identities=15%  Similarity=0.126  Sum_probs=177.0

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFH   86 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~vi~   86 (307)
                      .|||||||||||||++|+++|+++|+ .|+++++..               +     .|++|.+.+.++++  ++|.|+|
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~-~vi~~~~~~---------------~-----~~~~~~~~~~~~~~~~~~d~v~~   60 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGD-VELVLRTRD---------------E-----LNLLDSRAVHDFFASERIDQVYL   60 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTT-EEEECCCTT---------------T-----CCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcC-EEEEecCch---------------h-----ccccCHHHHHHHHhhcCCCEEEE
Confidence            46999999999999999999999999 776654421               1     58899999988876  5899999


Q ss_pred             eccCCCCC-CCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHH
Q 021819           87 VASPCTLE-DPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (307)
Q Consensus        87 ~a~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (307)
                      +|+..... ....+..+.+++|+.||.+++++|++.++++|||+||+++ |+...  ..+++|+.+....+. ....+|+
T Consensus        61 ~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~v-yg~~~--~~~~~E~~~~~~~~~-~~~~~Y~  136 (315)
T d1e6ua_          61 AAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCI-YPKLA--KQPMAESELLQGTLE-PTNEPYA  136 (315)
T ss_dssp             CCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGG-SCTTC--CSSBCGGGTTSSCCC-GGGHHHH
T ss_pred             cchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceE-cCCCC--CCCccCCccccCCCC-CCCCHHH
Confidence            98765431 1122346678899999999999999999999999999665 44333  256777765443221 1125799


Q ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCC---cchH-----HHHHHHHcCCCCCC---CCcccCcccHHHH
Q 021819          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYL---NASC-----AVLQQLLQGSKDTQ---EYHWLGAVPVKDV  234 (307)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~---~~~~-----~~~~~~~~~~~~~~---~~~~~~~i~~~dv  234 (307)
                      .+|.++|.+++.++++.|++++++||++||||.+....   ....     ........+.....   +.+.+++++++|+
T Consensus       137 ~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~  216 (315)
T d1e6ua_         137 IAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDM  216 (315)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehh
Confidence            99999999999999999999999999999999765431   1111     11223333333332   3467899999999


Q ss_pred             HHHHHHhhcCCCC---------CceEE-ecCCcccHHHHHHHHHHhC
Q 021819          235 AKAQVLLFESPAA---------SGRYL-CTNGIYQFGDFAERVSKLF  271 (307)
Q Consensus       235 a~~~~~~~~~~~~---------~g~~~-~~~~~~~~~~~~~~~~~~~  271 (307)
                      ++++..++++...         .+.++ +.+...++.++++.+.+..
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~  263 (315)
T d1e6ua_         217 AAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVV  263 (315)
T ss_dssp             HHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHH
T ss_pred             HHHHHHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHh
Confidence            9999999876432         12455 4567799999999999887

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.97  E-value=1.5e-31  Score=233.43  Aligned_cols=256  Identities=19%  Similarity=0.196  Sum_probs=192.8

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGV   84 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~v   84 (307)
                      .++|||||||||||||++|+++|+++|+ +|++++|+......+........ +++++.+|++|++.+.++++  .+|+|
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~-~i~~~~~Dl~d~~~l~~~~~~~~~~~v   83 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVAD-GMQSEIGDIRDQNKLLESIREFQPEIV   83 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTTT-TSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCccHHHHhhhhccc-CCeEEEeeccChHhhhhhhhhchhhhh
Confidence            3679999999999999999999999999 99999997765544322221122 78999999999999998886  57999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccH
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWY  164 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y  164 (307)
                      +|+|+........+.+...+.+|+.|+.+++++|++.+..++++.||.+..+..... ..+.+|+++..|.      ++|
T Consensus        84 ~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~-~~~~~~~~~~~p~------~~y  156 (356)
T d1rkxa_          84 FHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEW-IWGYRENEAMGGY------DPY  156 (356)
T ss_dssp             EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCS-SSCBCTTSCBCCS------SHH
T ss_pred             hhhhccccccccccCCccccccccccchhhhhhhhcccccccccccccccccccccc-ccccccccccCCC------Ccc
Confidence            999987654333345678899999999999999998764444444444544443332 3566777665554      789


Q ss_pred             HHHHHHHHHHHHHHHH---------hcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC--CCcccCcccHHH
Q 021819          165 PVSKTLAEKAAWEFAE---------KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ--EYHWLGAVPVKD  233 (307)
Q Consensus       165 ~~sK~~~e~~~~~~~~---------~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~d  233 (307)
                      +.+|...|..+..+++         ..++.++++||+++|||.+......+..++.....+.+...  +.+.++++|++|
T Consensus       157 ~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D  236 (356)
T d1rkxa_         157 SNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLE  236 (356)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHH
T ss_pred             ccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeecccccccccccc
Confidence            9999999988887665         34788999999999999876665666667777666665443  457899999999


Q ss_pred             HHHHHHHhhcCCCCCc-----eEEe---cCCcccHHHHHHHHHHhC
Q 021819          234 VAKAQVLLFESPAASG-----RYLC---TNGIYQFGDFAERVSKLF  271 (307)
Q Consensus       234 va~~~~~~~~~~~~~g-----~~~~---~~~~~~~~~~~~~~~~~~  271 (307)
                      ++.++..++++....+     ..+.   .....++.++++.+.+..
T Consensus       237 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  282 (356)
T d1rkxa_         237 PLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYW  282 (356)
T ss_dssp             HHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHH
T ss_pred             ccchhhhhhhhhcccccccccccccccccccccccchhhhhhHHHh
Confidence            9999998887644322     1222   234589999999999888

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.97  E-value=3.2e-31  Score=229.42  Aligned_cols=259  Identities=15%  Similarity=0.163  Sum_probs=187.5

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC--CcccccCCCCCCCceEEEEcccCChhHHHHHhcC--ccEEEE
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEG--CKGVFH   86 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~--~d~vi~   86 (307)
                      ||||||||||||++|+++|+++|+ +|+++++-...  ...+..+...  .+++++.+|++|.+++.+++++  +|+|||
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~-~V~~id~~~~~~~~~~~~~~~~~--~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih   78 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRKGATDNLHWLSSL--GNFEFVHGDIRNKNDVTRLITKYMPDSCFH   78 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSTTHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhHHHHhhcc--CCcEEEEcccCCHHHHHHHHHhcCCceEEe
Confidence            799999999999999999999999 99998763222  1222211111  1789999999999999999875  599999


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCC-------ch---hh
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWT-------DL---EY  156 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~-------~~---~~  156 (307)
                      +|+.........++...+++|+.||.+++++|.+.+++++|+.||..+++.....  .+..+.+..       ..   ..
T Consensus        79 ~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  156 (338)
T d1orra_          79 LAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQ--YKYNETETRYTCVDKPNGYDEST  156 (338)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTT--SCEEECSSCEEETTCTTCBCTTS
T ss_pred             ecccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccc--cccccccccccccccccCcccCC
Confidence            9998665333334578899999999999999999998887787877776665443  111111110       00   00


Q ss_pred             hcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC--CcchHHHHHHHHc-----CCCCCC---CCccc
Q 021819          157 CKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY--LNASCAVLQQLLQ-----GSKDTQ---EYHWL  226 (307)
Q Consensus       157 ~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~--~~~~~~~~~~~~~-----~~~~~~---~~~~~  226 (307)
                      ...+...|+.+|...|.+...+.+.+++...++|++.+|++.....  ......++.....     ++++.+   +.+.+
T Consensus       157 ~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r  236 (338)
T d1orra_         157 QLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVR  236 (338)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEE
T ss_pred             ccccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeE
Confidence            1122367999999999999999889999999999999998766443  2334444444432     334332   34789


Q ss_pred             CcccHHHHHHHHHHhhcCCC-CC-ceEEec---CCcccHHHHHHHHHHhCCCCC
Q 021819          227 GAVPVKDVAKAQVLLFESPA-AS-GRYLCT---NGIYQFGDFAERVSKLFPEFP  275 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~~-~~-g~~~~~---~~~~~~~~~~~~~~~~~~~~~  275 (307)
                      +|+|++|++++++.+++++. .. +.|++.   +.++++.|+++.+.+.. +.+
T Consensus       237 ~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~-~~~  289 (338)
T d1orra_         237 DVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYC-NID  289 (338)
T ss_dssp             ECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHH-TCC
T ss_pred             eeecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHH-CCC
Confidence            99999999999999998753 23 356653   35689999999999987 443

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.7e-30  Score=205.81  Aligned_cols=195  Identities=16%  Similarity=0.127  Sum_probs=151.5

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      ||||+||||||+||++|+++|+++|+ +|+++.|++++......      .+++++.+|++|.+++.++++++|+|||++
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~-~V~~~~R~~~~~~~~~~------~~~~~~~gD~~d~~~l~~al~~~d~vi~~~   75 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGP------RPAHVVVGDVLQAADVDKTVAGQDAVIVLL   75 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSC------CCSEEEESCTTSHHHHHHHHTTCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEcChhhcccccc------cccccccccccchhhHHHHhcCCCEEEEEe
Confidence            78999999999999999999999999 99999998766443322      178999999999999999999999999999


Q ss_pred             cCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHH
Q 021819           89 SPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSK  168 (307)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK  168 (307)
                      |....       ....+++..+++++++++++++++|||++||....+.....         +  +.     ...|...|
T Consensus        76 g~~~~-------~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~---------~--~~-----~~~~~~~~  132 (205)
T d1hdoa_          76 GTRND-------LSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKV---------P--PR-----LQAVTDDH  132 (205)
T ss_dssp             CCTTC-------CSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCS---------C--GG-----GHHHHHHH
T ss_pred             ccCCc-------hhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCccc---------c--cc-----ccccchHH
Confidence            86432       12235678899999999999999999999986543222111         0  11     13588889


Q ss_pred             HHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCCCCC
Q 021819          169 TLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAAS  248 (307)
Q Consensus       169 ~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~~~  248 (307)
                      ..+|++++    +.+++++++||+.+++....+....             ...+.....+++++|+|++++.++++++..
T Consensus       133 ~~~e~~l~----~~~~~~tiirp~~~~~~~~~~~~~~-------------~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~  195 (205)
T d1hdoa_         133 IRMHKVLR----ESGLKYVAVMPPHIGDQPLTGAYTV-------------TLDGRGPSRVISKHDLGHFMLRCLTTDEYD  195 (205)
T ss_dssp             HHHHHHHH----HTCSEEEEECCSEEECCCCCSCCEE-------------ESSSCSSCSEEEHHHHHHHHHHTTSCSTTT
T ss_pred             HHHHHHHH----hcCCceEEEecceecCCCCcccEEE-------------eeCCCCCCCcCCHHHHHHHHHHHhCCCCCC
Confidence            98988775    6799999999999987543322110             111335677899999999999999998866


Q ss_pred             ce
Q 021819          249 GR  250 (307)
Q Consensus       249 g~  250 (307)
                      |+
T Consensus       196 g~  197 (205)
T d1hdoa_         196 GH  197 (205)
T ss_dssp             TC
T ss_pred             CE
Confidence            64

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1e-30  Score=214.68  Aligned_cols=209  Identities=17%  Similarity=0.100  Sum_probs=160.5

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      ++|+|+|||||||||++|+++|+++|. ++|+++.|++.........      .+....+|+.+.+++.++++++|++||
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~------~i~~~~~D~~~~~~~~~~~~~~d~vi~   86 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYK------NVNQEVVDFEKLDDYASAFQGHDVGFC   86 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGG------GCEEEECCGGGGGGGGGGGSSCSEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccc------eeeeeeecccccccccccccccccccc
Confidence            457999999999999999999999985 4899999976543322211      678888999999999999999999999


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHH
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (307)
                      ++|....   ........++|+.++.+++++|.+.++++|||+||..+ +....                     ++|+.
T Consensus        87 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~-~~~~~---------------------~~Y~~  141 (232)
T d2bkaa1          87 CLGTTRG---KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGA-DKSSN---------------------FLYLQ  141 (232)
T ss_dssp             CCCCCHH---HHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTC-CTTCS---------------------SHHHH
T ss_pred             ccccccc---ccchhhhhhhcccccceeeecccccCccccccCCcccc-ccCcc---------------------chhHH
Confidence            9986432   23456788999999999999999999999999998654 22111                     57999


Q ss_pred             HHHHHHHHHHHHHHhcCCc-EEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCC
Q 021819          167 SKTLAEKAAWEFAEKHGVD-VVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (307)
Q Consensus       167 sK~~~e~~~~~~~~~~~i~-~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~  245 (307)
                      +|..+|..+.    +.+++ ++|+||+.+||+.....  ....+........+  ........++++|+|++++.++.++
T Consensus       142 ~K~~~E~~l~----~~~~~~~~IlRP~~i~G~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~I~~~dvA~a~i~~~~~~  213 (232)
T d2bkaa1         142 VKGEVEAKVE----ELKFDRYSVFRPGVLLCDRQESR--PGEWLVRKFFGSLP--DSWASGHSVPVVTVVRAMLNNVVRP  213 (232)
T ss_dssp             HHHHHHHHHH----TTCCSEEEEEECCEEECTTGGGS--HHHHHHHHHHCSCC--TTGGGGTEEEHHHHHHHHHHHHTSC
T ss_pred             HHHHhhhccc----cccccceEEecCceeecCCCcCc--HHHHHHHHHhhccC--CcccCCCeEEHHHHHHHHHHHHhcC
Confidence            9999999886    45764 99999999999875532  22233333333221  1223445799999999999999888


Q ss_pred             CCCceEEecC
Q 021819          246 AASGRYLCTN  255 (307)
Q Consensus       246 ~~~g~~~~~~  255 (307)
                      ...+.+++++
T Consensus       214 ~~~~~~i~~~  223 (232)
T d2bkaa1         214 RDKQMELLEN  223 (232)
T ss_dssp             CCSSEEEEEH
T ss_pred             ccCCeEEEcH
Confidence            8877777764

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.97  E-value=5.7e-30  Score=215.98  Aligned_cols=225  Identities=17%  Similarity=0.144  Sum_probs=180.1

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEEEEe
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFHV   87 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~vi~~   87 (307)
                      |||||||||||||++|+++|.++|+ +|++++|+.                     +|++|.++++++++  ++|+|||+
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~-~Vi~~~r~~---------------------~D~~d~~~~~~~l~~~~~d~vih~   59 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNV-EVIPTDVQD---------------------LDITNVLAVNKFFNEKKPNVVINC   59 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSE-EEEEECTTT---------------------CCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC-EEEEeechh---------------------ccCCCHHHHHHHHHHcCCCEEEee
Confidence            4799999999999999999999999 999988742                     58999999999887  67999999


Q ss_pred             ccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHH
Q 021819           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (307)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (307)
                      |+.................|+..+.++.+.+...+ ..+++.||.. +++...  ..+.+|.++..+.      ..|+.+
T Consensus        60 a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~ss~~-v~~~~~--~~~~~e~~~~~~~------~~~~~~  129 (281)
T d1vl0a_          60 AAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-AEIVQISTDY-VFDGEA--KEPITEFDEVNPQ------SAYGKT  129 (281)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEGG-GSCSCC--SSCBCTTSCCCCC------SHHHHH
T ss_pred             ccccccccccccchhhccccccccccccccccccc-ccccccccce-eeeccc--cccccccccccch------hhhhhh
Confidence            98765433333446778899999999999998876 4677777744 444443  2677888876664      679999


Q ss_pred             HHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCC-CCCcccCcccHHHHHHHHHHhhcCCC
Q 021819          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT-QEYHWLGAVPVKDVAKAQVLLFESPA  246 (307)
Q Consensus       168 K~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~dva~~~~~~~~~~~  246 (307)
                      |..+|.+++    ..+.+++++||++|||+...    ....++.....+.+.. .+++.+++++++|+++++..++++..
T Consensus       130 k~~~e~~~~----~~~~~~~i~R~~~vyG~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~  201 (281)
T d1vl0a_         130 KLEGENFVK----ALNPKYYIVRTAWLYGDGNN----FVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKN  201 (281)
T ss_dssp             HHHHHHHHH----HHCSSEEEEEECSEESSSSC----HHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHTC
T ss_pred             hhHHHHHHH----HhCCCccccceeEEeCCCcc----cccchhhhhccCCceeecCCceeccchhhhhhhhhhhhhhhcc
Confidence            999998886    56899999999999999743    4556666666666544 46788999999999999999998866


Q ss_pred             CCceEEe-cCCcccHHHHHHHHHHhCCCCCC
Q 021819          247 ASGRYLC-TNGIYQFGDFAERVSKLFPEFPV  276 (307)
Q Consensus       247 ~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~  276 (307)
                      . |.|++ +++.+|+.|+++.+.+.+ +.+.
T Consensus       202 ~-g~~~~~~~~~~s~~e~~~~i~~~~-g~~~  230 (281)
T d1vl0a_         202 Y-GTFHCTCKGICSWYDFAVEIFRLT-GIDV  230 (281)
T ss_dssp             C-EEEECCCBSCEEHHHHHHHHHHHH-CCCC
T ss_pred             c-CceeEeCCCccchHHHHHHHHHHh-CCCc
Confidence            4 67765 567799999999999998 5443

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.96  E-value=3e-28  Score=201.56  Aligned_cols=227  Identities=15%  Similarity=0.097  Sum_probs=166.8

Q ss_pred             cccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc---
Q 021819            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---   79 (307)
Q Consensus         3 ~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~---   79 (307)
                      .+.++++|+++||||+++||+++++.|+++|+ +|++.+|+.+..+.+.........++..+++|++|+++++++++   
T Consensus         4 ~~f~lenKvalITGas~GIG~a~a~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~   82 (251)
T d2c07a1           4 YYYCGENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKIL   82 (251)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            35567899999999999999999999999999 89999997665544332211112278899999999999888775   


Q ss_pred             ----CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccc
Q 021819           80 ----GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        80 ----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                          .+|++|||||.....    ...+++.+.+++|+.++..+.+++    ++++.++||++||..+..+.+..      
T Consensus        83 ~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~------  156 (251)
T d2c07a1          83 TEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQ------  156 (251)
T ss_dssp             HHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC------
T ss_pred             HhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCC------
Confidence                679999999976542    233567999999999998888876    44566899999998887665553      


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCc
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (307)
                                    ..|+.+|...+.+.+.++.+   +||++++|.||.|.++.....   .....+......|      
T Consensus       157 --------------~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~---~~~~~~~~~~~~p------  213 (251)
T d2c07a1         157 --------------ANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI---SEQIKKNIISNIP------  213 (251)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C---CHHHHHHHHTTCT------
T ss_pred             --------------HHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccccc---CHHHHHHHHhcCC------
Confidence                          45777777777777766654   589999999999988865443   2334444444332      


Q ss_pred             ccCcccHHHHHHHHHHhhcC--CCCCceEEecCCccc
Q 021819          225 WLGAVPVKDVAKAQVLLFES--PAASGRYLCTNGIYQ  259 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~~~  259 (307)
                      ...+..++|+|+++.+++..  ....|..+..|+++|
T Consensus       214 l~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~s  250 (251)
T d2c07a1         214 AGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGGLS  250 (251)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             CCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECCCcC
Confidence            33477999999999988843  345687776666654

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=5.8e-28  Score=205.79  Aligned_cols=238  Identities=20%  Similarity=0.188  Sum_probs=163.0

Q ss_pred             EEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCc--ccccCCCCCCCceEEEEcccCChhHHHH-H-----hcCccE
Q 021819           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS--HLFALPGAGDANLRVFEADVLDSGAVSR-A-----VEGCKG   83 (307)
Q Consensus        12 ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~i~~D~~d~~~~~~-~-----~~~~d~   83 (307)
                      |||||||||||++|+++|+++|+++|+++++-.....  .+...      .    ..|..+.+.+.. .     +..+++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~------~----~~~~~~~~~~~~~~~~~~~~~~~~~   71 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL------N----IADYMDKEDFLIQIMAGEEFGDVEA   71 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTS------C----CSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhccccc------c----hhhhccchHHHHHHhhhhcccchhh
Confidence            8999999999999999999999758998875322211  11111      1    123333222222 2     236799


Q ss_pred             EEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCcc
Q 021819           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKW  163 (307)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  163 (307)
                      |+|+|+.....  ..+.....+.|+.++.+++++++..+++ +++.||...+++...   ....|+++..+.      +.
T Consensus        72 i~~~aa~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~v~~ss~~~~~~~~~---~~~~~~~~~~~~------~~  139 (307)
T d1eq2a_          72 IFHEGACSSTT--EWDGKYMMDNNYQYSKELLHYCLEREIP-FLYASSAATYGGRTS---DFIESREYEKPL------NV  139 (307)
T ss_dssp             EEECCSCCCTT--CCCHHHHHHHTHHHHHHHHHHHHHHTCC-EEEEEEGGGGTTCCS---CBCSSGGGCCCS------SH
T ss_pred             hhhhccccccc--cccccccccccccccccccccccccccc-ccccccccccccccc---cccccccccccc------cc
Confidence            99999865442  3455678888999999999999999886 566666555444322   334444433332      68


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCC---CcchHHHHHHHHcCCCCCC----CCcccCcccHHHHHH
Q 021819          164 YPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDTQ----EYHWLGAVPVKDVAK  236 (307)
Q Consensus       164 y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~dva~  236 (307)
                      |+.+|..+|.+++.++++++++++++||+++|||.....   ......++.++..++....    +...++++|++|+++
T Consensus       140 Y~~~K~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~  219 (307)
T d1eq2a_         140 YGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVAD  219 (307)
T ss_dssp             HHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHH
T ss_pred             cccccchhhhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHH
Confidence            999999999999999999999999999999999976533   2345556666666654432    336789999999999


Q ss_pred             HHHHhhcCCCCCceEEe-cCCcccHHHHHHHHHHhCC
Q 021819          237 AQVLLFESPAASGRYLC-TNGIYQFGDFAERVSKLFP  272 (307)
Q Consensus       237 ~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~  272 (307)
                      ++..+++++.. +.|++ +++..++.++++.+.+..+
T Consensus       220 ~~~~~~~~~~~-~~~~~~~~~~~si~~i~~~i~~~~~  255 (307)
T d1eq2a_         220 VNLWFLENGVS-GIFNLGTGRAESFQAVADATLAYHK  255 (307)
T ss_dssp             HHHHHHHHCCC-EEEEESCSCCBCHHHHHHHC-----
T ss_pred             HHHHHhhhccc-cccccccccchhHHHHHHHHHHhcC
Confidence            99999987654 56654 6788999999999987764

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.95  E-value=2.1e-27  Score=194.52  Aligned_cols=214  Identities=21%  Similarity=0.137  Sum_probs=156.7

Q ss_pred             cccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         5 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      +++++|+++||||+++||+++++.|+++|+ +|++.+|+.+..+           ++..+++|++|+++++++++     
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~-----------~~~~~~~Dv~~~~~v~~~~~~~~~~   70 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPK-----------GLFGVEVDVTDSDAVDRAFTAVEEH   70 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCT-----------TSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcchhc-----------CceEEEEecCCHHHHHHHHHHHHHh
Confidence            356789999999999999999999999999 9999999764432           46778999999999888775     


Q ss_pred             --CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                        ++|++|||||....    +...+++++.+++|+.++..+.+++    ++++.++||++||..+..+.+..        
T Consensus        71 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~--------  142 (237)
T d1uzma1          71 QGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQ--------  142 (237)
T ss_dssp             HSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CC--------
T ss_pred             cCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCccc--------
Confidence              57999999997654    3344567899999999988887765    45566799999998876655443        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                                  ..|+.+|...+.+.+.++.+   +||++++|.||.|.++.....   .....+......|      ..
T Consensus       143 ------------~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~---~~~~~~~~~~~~p------l~  201 (237)
T d1uzma1         143 ------------ANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL---DERIQQGALQFIP------AK  201 (237)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS---CHHHHHHHGGGCT------TC
T ss_pred             ------------HHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhcc---CHHHHHHHHhcCC------CC
Confidence                        46888888887777766655   589999999999987653221   1222222222221      34


Q ss_pred             CcccHHHHHHHHHHhhcC--CCCCceEEecCCccc
Q 021819          227 GAVPVKDVAKAQVLLFES--PAASGRYLCTNGIYQ  259 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~~~  259 (307)
                      .+..++|+|+++.+++..  ....|..+..|++++
T Consensus       202 R~~~pedvA~~v~fL~S~~s~~itG~~i~vdGG~~  236 (237)
T d1uzma1         202 RVGTPAEVAGVVSFLASEDASYISGAVIPVDGGMG  236 (237)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCcCHHHHHHHHHHHhCchhcCCcCCeEEECCCCC
Confidence            567999999999988843  345677666665543

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=4.2e-27  Score=193.40  Aligned_cols=218  Identities=19%  Similarity=0.166  Sum_probs=162.7

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ++++|+++||||+++||+++++.|+++|+ +|++.+|+.+..+.+.+..     +++.+.+|++|+++++++++      
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~-~V~~~~r~~~~l~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~   75 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAV-----GAHPVVMDVADPASVERGFAEALAHL   75 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHhc
Confidence            46789999999999999999999999999 8999999866554443322     67889999999999888775      


Q ss_pred             -CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 -GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                       ++|++|||||....    +...+++.+.+++|+.++.++.+++.+    .+.+.++++||. ...+.++.         
T Consensus        76 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~-~~~~~~~~---------  145 (242)
T d1ulsa_          76 GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASR-VYLGNLGQ---------  145 (242)
T ss_dssp             SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCG-GGGCCTTC---------
T ss_pred             CCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccc-cccCCCCC---------
Confidence             57999999997654    233456799999999999999888743    355677777774 33333332         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                                 ..|+.+|...+.+.+.++.+   +||++++|.||.|.++.....   .....++.....|      ...
T Consensus       146 -----------~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~---~~~~~~~~~~~~p------l~R  205 (242)
T d1ulsa_         146 -----------ANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV---PEKVREKAIAATP------LGR  205 (242)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS---CHHHHHHHHHTCT------TCS
T ss_pred             -----------cchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcC---CHHHHHHHHhcCC------CCC
Confidence                       45888888877777766655   489999999999998876543   2233344444332      344


Q ss_pred             cccHHHHHHHHHHhhc--CCCCCceEEecCCccc
Q 021819          228 AVPVKDVAKAQVLLFE--SPAASGRYLCTNGIYQ  259 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~--~~~~~g~~~~~~~~~~  259 (307)
                      +..++|+|+++.+++.  +....|..+..|++++
T Consensus       206 ~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~t  239 (242)
T d1ulsa_         206 AGKPLEVAYAALFLLSDESSFITGQVLFVDGGRT  239 (242)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCCHHHHHHHHHHHhchhhCCCCCcEEEECCCcc
Confidence            6799999999999884  3445687777776665

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.95  E-value=2e-27  Score=195.23  Aligned_cols=215  Identities=16%  Similarity=0.147  Sum_probs=159.6

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      .+++|+++||||+++||+++++.|+++|+ +|++.+|++++.+.+.....   .++.++++|++|+++++++++      
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~   78 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELA---DAARYVHLDVTQPAQWKAAVDTAVTAF   78 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTG---GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhh---CcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            46789999999999999999999999999 89999998765544433221   168899999999999888775      


Q ss_pred             -CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 -GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                       .+|++|||||....    +...+++.+.+++|+.++.++.+.+    .+++.++||++||..+..+.+..         
T Consensus        79 g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~---------  149 (244)
T d1nffa_          79 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVAC---------  149 (244)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTB---------
T ss_pred             CCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccc---------
Confidence             57999999997654    2234567899999999999998876    34455799999998876554443         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                                 ..|+.+|...+.+.+.++.+   +||++++|.||.|.++.........        .      ......
T Consensus       150 -----------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~--------~------~~pl~R  204 (244)
T d1nffa_         150 -----------HGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDI--------F------QTALGR  204 (244)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTTC--------S------CCSSSS
T ss_pred             -----------cchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHHH--------H------hccccC
Confidence                       45777777777776666654   5899999999999887643221100        0      112334


Q ss_pred             cccHHHHHHHHHHhhc--CCCCCceEEecCCcc
Q 021819          228 AVPVKDVAKAQVLLFE--SPAASGRYLCTNGIY  258 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~--~~~~~g~~~~~~~~~  258 (307)
                      +..++|+|+++++++.  .....|..+..|+++
T Consensus       205 ~~~p~diA~~v~fL~s~~s~~itG~~i~vDGG~  237 (244)
T d1nffa_         205 AAEPVEVSNLVVYLASDESSYSTGAEFVVDGGT  237 (244)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCHHHHHHHHHHHhChhhCCCcCCEEEECCCe
Confidence            7899999999999884  334567766555543

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=9.6e-28  Score=197.88  Aligned_cols=220  Identities=15%  Similarity=0.081  Sum_probs=158.8

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +++|++|||||+++||+++++.|+++|+ +|++.+|+++..+..+..      +..++++|++|+++++++++       
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~~~G   75 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAI------GGAFFQVDLEDERERVRFVEEAAYALG   75 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHH------TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHc------CCeEEEEeCCCHHHHHHHHHHHHHhcC
Confidence            6799999999999999999999999999 899999986654433333      56788999999998888775       


Q ss_pred             CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                      ++|++|||||....    +...+++++.+++|+.++.++.+++.    +++.++||++||..+..+.+..          
T Consensus        76 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~----------  145 (248)
T d2d1ya1          76 RVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQEN----------  145 (248)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTB----------
T ss_pred             CCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccccccccc----------
Confidence            67999999997654    22344678999999999999988874    4456799999998876665443          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCC---CcchHHHHHHHHcCCCCCCCCcc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                                ..|+.+|...+.+.+.++.+   +||++++|.||.|.++.....   ........+......      ..
T Consensus       146 ----------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~------pl  209 (248)
T d2d1ya1         146 ----------AAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLH------AL  209 (248)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTS------TT
T ss_pred             ----------chhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcC------CC
Confidence                      45777777777777666655   589999999999977532110   000001111111111      13


Q ss_pred             cCcccHHHHHHHHHHhhcC--CCCCceEEecCCccc
Q 021819          226 LGAVPVKDVAKAQVLLFES--PAASGRYLCTNGIYQ  259 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~~~  259 (307)
                      ..+..++|+|+++.+++..  ....|..+..|++++
T Consensus       210 ~R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~t  245 (248)
T d2d1ya1         210 RRLGKPEEVAEAVLFLASEKASFITGAILPVDGGMT  245 (248)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCCCCcEEEcCcCcc
Confidence            4567899999999988853  345677666666654

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=6.2e-28  Score=198.54  Aligned_cols=219  Identities=17%  Similarity=0.143  Sum_probs=163.6

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +++|+++||||+++||+++++.|+++|+ +|++.+|+++..+.+.....   .+...+.+|++|+++++++++       
T Consensus         2 l~gK~alITGas~GIG~a~a~~l~~~G~-~Vv~~~r~~~~l~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (243)
T d1q7ba_           2 FEGKIALVTGASRGIGRAIAETLAARGA-KVIGTATSENGAQAISDYLG---ANGKGLMLNVTDPASIESVLEKIRAEFG   77 (243)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHG---GGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhC---CCCcEEEEEecCHHHhhhhhhhhhcccC
Confidence            5789999999999999999999999999 89999997665544332211   167889999999999888775       


Q ss_pred             CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                      ++|++|||||....    +...+++.+.+++|+.++..+.+++    ++++-++||++||..+..+.+..          
T Consensus        78 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~----------  147 (243)
T d1q7ba_          78 EVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQ----------  147 (243)
T ss_dssp             SCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC----------
T ss_pred             CcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCC----------
Confidence            58999999987654    2334567899999999999998887    44456799999998876665553          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (307)
                                ..|+.+|...+.+.+.++.+   +|+++++|.||.|.++.....   ............|      ...+
T Consensus       148 ----------~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~---~~~~~~~~~~~~p------l~R~  208 (243)
T d1q7ba_         148 ----------ANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRAL---SDDQRAGILAQVP------AGRL  208 (243)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---CHHHHHHHHTTCT------TSSC
T ss_pred             ----------HHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhh---hhhHHHHHHhcCC------CCCC
Confidence                      46888888887777776655   589999999999987654332   1222333333322      3456


Q ss_pred             ccHHHHHHHHHHhhcC--CCCCceEEecCCcc
Q 021819          229 VPVKDVAKAQVLLFES--PAASGRYLCTNGIY  258 (307)
Q Consensus       229 i~~~dva~~~~~~~~~--~~~~g~~~~~~~~~  258 (307)
                      ..++|+|+++.+++..  ....|..+..|+++
T Consensus       209 ~~pedvA~~v~fL~S~~s~~itGq~i~vdGG~  240 (243)
T d1q7ba_         209 GGAQEIANAVAFLASDEAAYITGETLHVNGGM  240 (243)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CCHHHHHHHHHHHhCchhcCCcCCeEEECCCe
Confidence            7999999999998853  33567766655554

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3e-27  Score=194.68  Aligned_cols=222  Identities=18%  Similarity=0.109  Sum_probs=165.7

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc---Ccc
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GCK   82 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~---~~d   82 (307)
                      .+++|+++||||+++||+++++.|+++|+ +|++.+|+.++.+.+.....    ++..+.+|++|+++++++++   ++|
T Consensus         4 ~L~GK~~lITGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~g~iD   78 (244)
T d1pr9a_           4 FLAGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALGSVGPVD   78 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHTTCCCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHHHHhCCce
Confidence            36899999999999999999999999999 89999998766554433221    67889999999999998886   579


Q ss_pred             EEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHh-----cCCcEEEEecCcceeccCCCCCCcccccCCCCc
Q 021819           83 GVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR-----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (307)
Q Consensus        83 ~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~  153 (307)
                      ++|||||....    ....+++++.+++|+.++.++.+++.+     .+.+++|++||..+..+.+..            
T Consensus        79 ilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~------------  146 (244)
T d1pr9a_          79 LLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNH------------  146 (244)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTB------------
T ss_pred             EEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccch------------
Confidence            99999997654    234456789999999999888887632     345789999998775554442            


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCccc
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  230 (307)
                              ..|+.+|...+.+.+.++.+   +||++++|.||.|.++....... .....+......|      ...+..
T Consensus       147 --------~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~-~~~~~~~~~~~~p------l~R~~~  211 (244)
T d1pr9a_         147 --------SVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWS-DPHKAKTMLNRIP------LGKFAE  211 (244)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSC-SHHHHHHHHTTCT------TCSCBC
T ss_pred             --------hhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhcc-ChHHHHHHHhcCC------CCCCcC
Confidence                    45888888888777776655   58999999999998875432211 1233333443332      345789


Q ss_pred             HHHHHHHHHHhhcC--CCCCceEEecCCccc
Q 021819          231 VKDVAKAQVLLFES--PAASGRYLCTNGIYQ  259 (307)
Q Consensus       231 ~~dva~~~~~~~~~--~~~~g~~~~~~~~~~  259 (307)
                      ++|+|+++.+++..  ....|..+..|++++
T Consensus       212 peevA~~v~fL~S~~a~~itG~~i~vDGG~~  242 (244)
T d1pr9a_         212 VEHVVNAILFLLSDRSGMTTGSTLPVEGGFW  242 (244)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHHhCchhCCcCCcEEEECccHh
Confidence            99999999988853  345677777666653

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=1.8e-27  Score=195.67  Aligned_cols=222  Identities=19%  Similarity=0.136  Sum_probs=163.5

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc---Ccc
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---GCK   82 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~---~~d   82 (307)
                      ++++|+++||||+++||+++++.|+++|+ +|++.+|+.++.+.+.....    ++..+.+|++|+++++++++   ++|
T Consensus         2 dl~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~----~~~~~~~Dv~~~~~v~~~~~~~g~iD   76 (242)
T d1cyda_           2 NFSGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECP----GIEPVCVDLGDWDATEKALGGIGPVD   76 (242)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHTTCCCCS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHHHHcCCCe
Confidence            47899999999999999999999999999 99999998665544333221    67889999999999999887   579


Q ss_pred             EEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHh-----cCCcEEEEecCcceeccCCCCCCcccccCCCCc
Q 021819           83 GVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR-----FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (307)
Q Consensus        83 ~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~  153 (307)
                      ++|||||....    ....++++..+++|+.++.++.+++.+     .+.+++|++||..+..+.+..            
T Consensus        77 ilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~------------  144 (242)
T d1cyda_          77 LLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNL------------  144 (242)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTB------------
T ss_pred             EEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCcc------------
Confidence            99999997654    234456789999999999999887632     234689999997765554442            


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCccc
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  230 (307)
                              ..|+.+|...+.+.+.++.+   +||++++|.||.|.++...... .............|      ...+..
T Consensus       145 --------~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~-~~~~~~~~~~~~~p------l~R~~~  209 (242)
T d1cyda_         145 --------ITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVS-ADPEFARKLKERHP------LRKFAE  209 (242)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHT-CCHHHHHHHHHHST------TSSCBC
T ss_pred             --------ccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhc-CCHHHHHHHHhcCC------CCCCcC
Confidence                    46888888888887777655   4899999999999776432111 11223333333222      345689


Q ss_pred             HHHHHHHHHHhhcC--CCCCceEEecCCccc
Q 021819          231 VKDVAKAQVLLFES--PAASGRYLCTNGIYQ  259 (307)
Q Consensus       231 ~~dva~~~~~~~~~--~~~~g~~~~~~~~~~  259 (307)
                      ++|+|+++.+++..  ....|..+..|++++
T Consensus       210 peeva~~v~fL~S~~s~~itG~~i~vDGG~~  240 (242)
T d1cyda_         210 VEDVVNSILFLLSDRSASTSGGGILVDAGYL  240 (242)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSSEEEESTTGG
T ss_pred             HHHHHHHHHHHhCchhcCcCCceEEeCcchh
Confidence            99999999998843  335577666666553

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=1.7e-27  Score=197.27  Aligned_cols=222  Identities=17%  Similarity=0.179  Sum_probs=162.1

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      ++++|+++||||+++||+++++.|+++|+ +|++.+|+.++.+.+.. +...+. ++..+++|++|+++++++++     
T Consensus         8 ~L~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~l~~~g~-~~~~~~~Dvs~~~~~~~~~~~~~~~   85 (255)
T d1fmca_           8 RLDGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGG-QAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCC-cEEEEEccCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999 89999997655443322 211122 78899999999998887765     


Q ss_pred             --CccEEEEeccCCCC---CCCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 --GCKGVFHVASPCTL---EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 --~~d~vi~~a~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                        ++|++|||||....   +...+++.+.+++|+.++.++.+++.    +.+.+++|++||..+..+.++.         
T Consensus        86 ~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~---------  156 (255)
T d1fmca_          86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINM---------  156 (255)
T ss_dssp             HSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTC---------
T ss_pred             cCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhcccccc---------
Confidence              67999999997654   23345678999999999999888773    4455789999998776555443         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                                 ..|+.+|...+.+.+.++.+   +||++++|.||.|.++......  .....+......|      ...
T Consensus       157 -----------~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~--~~e~~~~~~~~~p------l~R  217 (255)
T d1fmca_         157 -----------TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI--TPEIEQKMLQHTP------IRR  217 (255)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC--CHHHHHHHHHTCS------SCS
T ss_pred             -----------ccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccC--CHHHHHHHHhcCC------CCC
Confidence                       45777777777777666644   5899999999999876533221  1233444444333      234


Q ss_pred             cccHHHHHHHHHHhhcC--CCCCceEEecCCc
Q 021819          228 AVPVKDVAKAQVLLFES--PAASGRYLCTNGI  257 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~  257 (307)
                      +..++|+|+++++++..  ....|..+..|++
T Consensus       218 ~g~pedvA~~v~fL~S~~s~~itG~~i~vDGG  249 (255)
T d1fmca_         218 LGQPQDIANAALFLCSPAASWVSGQILTVSGG  249 (255)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCchhcCCcCCEEEECcC
Confidence            67899999999998843  3356776655443

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.95  E-value=1.3e-26  Score=193.62  Aligned_cols=229  Identities=18%  Similarity=0.199  Sum_probs=164.6

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      .+++|+++||||+++||+++++.|+++|+ +|++.+|+.+..+.+........ .+.++.+|++|+++++++++      
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPD-VISFVHCDVTKDEDVRNLVDTTIAKH   80 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTT-TEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCC-ceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            36789999999999999999999999999 89999997665544333222222 68889999999999988875      


Q ss_pred             -CccEEEEeccCCCCC------CCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 -GCKGVFHVASPCTLE------DPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                       .+|++|||||.....      ...+++...+++|+.++..+.+++.    +++.+++|++||+.+..+....       
T Consensus        81 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~-------  153 (268)
T d2bgka1          81 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGV-------  153 (268)
T ss_dssp             SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTS-------
T ss_pred             CCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccccccc-------
Confidence             679999999975432      1234578899999999988888773    4456789999997765443331       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                           .       ..|+.+|...+.+.+.++.+   +||++++|.||.|.++......................    ..
T Consensus       154 -----~-------~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~----~~  217 (268)
T d2bgka1         154 -----S-------HVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAAN----LK  217 (268)
T ss_dssp             -----C-------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCS----SC
T ss_pred             -----c-------cccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccc----cC
Confidence                 0       25777887777777766655   58999999999999987655432222333222221111    12


Q ss_pred             cCcccHHHHHHHHHHhhcC--CCCCceEEecCCccc
Q 021819          226 LGAVPVKDVAKAQVLLFES--PAASGRYLCTNGIYQ  259 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~~~  259 (307)
                      ..+..++|+|+++++++..  ....|..+..|+++|
T Consensus       218 gr~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG~t  253 (268)
T d2bgka1         218 GTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYT  253 (268)
T ss_dssp             SCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCcCHHHHHHHHHHHhChhhCCccCceEEECcCcc
Confidence            3467899999999998853  345687777776654

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.95  E-value=1.6e-27  Score=196.43  Aligned_cols=229  Identities=21%  Similarity=0.157  Sum_probs=162.2

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCC-eEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYT-SINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      .|++|||||||||||++|+++|+++|+. .|+++.|++++...+..       +++++.+|+++.+++.++++++|.|||
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-------~~~~~~~d~~~~~~~~~~~~~~d~vi~   74 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-------EADVFIGDITDADSINPAFQGIDALVI   74 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-------CTTEEECCTTSHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-------CcEEEEeeeccccccccccccceeeEE
Confidence            3679999999999999999999999972 46777776654333221       678999999999999999999999999


Q ss_pred             eccCCCCCC-------------CCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCc
Q 021819           87 VASPCTLED-------------PVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (307)
Q Consensus        87 ~a~~~~~~~-------------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~  153 (307)
                      +++......             ..........+|+.++.+++..+...+.+++.+.|+........              
T Consensus        75 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~--------------  140 (252)
T d2q46a1          75 LTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDH--------------  140 (252)
T ss_dssp             CCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTC--------------
T ss_pred             EEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCc--------------
Confidence            998654211             11223566788999999999999998888899888744321111              


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHH
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKD  233 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d  233 (307)
                      + ........|...+.+.+.+.    ...+++++++||+.+||+........         .+..........+++|++|
T Consensus       141 ~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ilRp~~v~g~~~~~~~~~---------~~~~~~~~~~~~~~i~~~D  206 (252)
T d2q46a1         141 P-LNKLGNGNILVWKRKAEQYL----ADSGTPYTIIRAGGLLDKEGGVRELL---------VGKDDELLQTDTKTVPRAD  206 (252)
T ss_dssp             G-GGGGGGCCHHHHHHHHHHHH----HHSSSCEEEEEECEEECSCTTSSCEE---------EESTTGGGGSSCCEEEHHH
T ss_pred             c-cccccccchhhhhhhhhhhh----hcccccceeecceEEECCCcchhhhh---------hccCcccccCCCCeEEHHH
Confidence            1 11111234666666655544    36799999999999999975443111         1111122335678999999


Q ss_pred             HHHHHHHhhcCCCCCc-eEEecCC----cccHHHHHHHHHHhC
Q 021819          234 VAKAQVLLFESPAASG-RYLCTNG----IYQFGDFAERVSKLF  271 (307)
Q Consensus       234 va~~~~~~~~~~~~~g-~~~~~~~----~~~~~~~~~~~~~~~  271 (307)
                      +|++++.+++++...| .|+++++    ..++.++.+.+.+..
T Consensus       207 va~a~~~~l~~~~~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~  249 (252)
T d2q46a1         207 VAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVT  249 (252)
T ss_dssp             HHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHTTCC
T ss_pred             HHHHHHHHhCCccccCcEEEEeeCCCCCChhHHHHHHHHHHHH
Confidence            9999999999988777 5766532    356667777666554

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.8e-27  Score=195.20  Aligned_cols=223  Identities=18%  Similarity=0.135  Sum_probs=162.4

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      .+++|+++||||+++||+++++.|+++|+ +|++.+|+.+..+.+.....    ++.++.+|++|+++++++++      
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~----~~~~~~~Dvs~~~~v~~~~~~~~~~~   77 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELP----GAVFILCDVTQEDDVKTLVSETIRRF   77 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCT----TEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcC----CCeEEEccCCCHHHHHHHHHHHHHhc
Confidence            46799999999999999999999999999 89999997666554443322    67899999999999888775      


Q ss_pred             -CccEEEEeccCCCCC-----CCCChhhhhhhhhHHHHHHHHHHHHhc---CCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 -GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                       ++|++|||||.....     ...+++++.+++|+.++.++.+++.+.   +-+++|++||..+..+.+..         
T Consensus        78 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~~~---------  148 (250)
T d1ydea1          78 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQA---------  148 (250)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTC---------
T ss_pred             CCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccccCc---------
Confidence             579999999965431     233457899999999999998887432   22689999998876665543         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCC---CcchHHHHHHHHcCCCCCCCCc
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  224 (307)
                                 ..|+.+|...+.+.+.++.+   +||++++|.||.|.++.....   .......+++.....|      
T Consensus       149 -----------~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~p------  211 (250)
T d1ydea1         149 -----------VPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQP------  211 (250)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTST------
T ss_pred             -----------chhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCC------
Confidence                       46788887777777766655   589999999999977542111   1112233333333322      


Q ss_pred             ccCcccHHHHHHHHHHhhc-CCCCCceEEecCCccc
Q 021819          225 WLGAVPVKDVAKAQVLLFE-SPAASGRYLCTNGIYQ  259 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~-~~~~~g~~~~~~~~~~  259 (307)
                      ...+..++|+|+++.+++. .....|..+..|++++
T Consensus       212 l~R~g~p~eva~~v~fL~Sda~~itG~~i~vDGG~~  247 (250)
T d1ydea1         212 LGRMGQPAEVGAAAVFLASEANFCTGIELLVTGGAE  247 (250)
T ss_dssp             TSSCBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTT
T ss_pred             CCCCCCHHHHHHHHHHHhCccCCCcCCeEEECCCcc
Confidence            3457899999999998874 2334576666665544

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.95  E-value=4.7e-27  Score=195.17  Aligned_cols=226  Identities=16%  Similarity=0.131  Sum_probs=161.2

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC-Cccccc-CCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      ++++|+++||||+++||+++++.|+++|+ +|++.+|+.+. .+.+.+ +..... ++..+++|++|+++++++++    
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~g~-~~~~~~~Dvt~~~~v~~~~~~~~~   81 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGG-EAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999 89999987543 222222 111122 68899999999999888775    


Q ss_pred             ---CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHH----HhcC-CcEEEEecCcceeccCCCCCCcccc
Q 021819           80 ---GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFG-VRRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                         ++|++|||||....    +...+++.+.+++|+.++.++.+++    .+++ .++||++||.++..+.+..      
T Consensus        82 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~------  155 (261)
T d1geea_          82 EFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLF------  155 (261)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTC------
T ss_pred             HhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccc------
Confidence               67999999998654    2344567899999999998888876    3444 3569999998775554443      


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCc
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (307)
                                    ..|+.+|...+.+.+.++.+   +||++++|.||.|.++...... .............|      
T Consensus       156 --------------~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~-~~~~~~~~~~~~~p------  214 (261)
T d1geea_         156 --------------VHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKF-ADPEQRADVESMIP------  214 (261)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHH-HSHHHHHHHHTTCT------
T ss_pred             --------------cccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhc-CCHHHHHHHHhcCC------
Confidence                          45777777777776666544   5899999999999877532210 01222233333222      


Q ss_pred             ccCcccHHHHHHHHHHhhcC--CCCCceEEecCCcccH
Q 021819          225 WLGAVPVKDVAKAQVLLFES--PAASGRYLCTNGIYQF  260 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~~~~  260 (307)
                      ...+..++|+|+++++++..  ....|..+..|+++++
T Consensus       215 l~R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~sl  252 (261)
T d1geea_         215 MGYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMTL  252 (261)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCeeC
Confidence            33467999999999988853  3356777777766653

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.95  E-value=2.6e-27  Score=196.75  Aligned_cols=229  Identities=15%  Similarity=0.091  Sum_probs=165.6

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      ++++++|+++||||+++||+++++.|+++|+ +|++.+|+.+..+.+.........++..+++|++|+++++++++    
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVAN   81 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999 89999997665543322211112268889999999988887663    


Q ss_pred             ----CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccc
Q 021819           80 ----GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        80 ----~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                          .+|++|||||....    +...+++.+.+++|+.++.++.+++    ++.+.+++|++||..+..+.+..      
T Consensus        82 ~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~------  155 (259)
T d2ae2a_          82 HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYE------  155 (259)
T ss_dssp             HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTC------
T ss_pred             HhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccc------
Confidence                37999999997654    2334567899999999999888876    44456799999998775554443      


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCC--cchHHHHHHHHcCCCCCCC
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKDTQE  222 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~  222 (307)
                                    ..|+.+|...+.+.+.++.+   ++|++++|.||.|.++......  ......+.++....|    
T Consensus       156 --------------~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~p----  217 (259)
T d2ae2a_         156 --------------AVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCA----  217 (259)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTST----
T ss_pred             --------------cchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCC----
Confidence                          46888888888777777655   4899999999999876432111  112233344444333    


Q ss_pred             CcccCcccHHHHHHHHHHhhcC--CCCCceEEecCCccc
Q 021819          223 YHWLGAVPVKDVAKAQVLLFES--PAASGRYLCTNGIYQ  259 (307)
Q Consensus       223 ~~~~~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~~~  259 (307)
                        ...+..++|+|+++++++..  ....|..+..|++++
T Consensus       218 --l~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~  254 (259)
T d2ae2a_         218 --LRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGLM  254 (259)
T ss_dssp             --TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             --CCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECCCeE
Confidence              33467899999999988853  335677776666653

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.95  E-value=6.7e-27  Score=194.02  Aligned_cols=227  Identities=14%  Similarity=0.127  Sum_probs=164.1

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ++++|++|||||+++||+++++.|+++|+ +|+..+|+++..+.+.+........+.++.+|++++++++++++      
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   81 (258)
T d1ae1a_           3 SLKGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   81 (258)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            46789999999999999999999999999 99999998755444332211112267889999999998877664      


Q ss_pred             --CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                        .+|++|||||....    +...+++...+++|+.++.++.+++.    +.+.+++|++||..+..+.+..        
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~--------  153 (258)
T d1ae1a_          82 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSV--------  153 (258)
T ss_dssp             TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTC--------
T ss_pred             CCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccc--------
Confidence              37999999997654    22344679999999999999988774    3456799999998876554443        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCC---cchHHHHHHHHcCCCCCCCC
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL---NASCAVLQQLLQGSKDTQEY  223 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~  223 (307)
                                  ..|+.+|...+.+.+.++.+   .||++++|.||.|.++......   .........+....|     
T Consensus       154 ------------~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~p-----  216 (258)
T d1ae1a_         154 ------------SLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTP-----  216 (258)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHST-----
T ss_pred             ------------hhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCC-----
Confidence                        46888888888887777665   4899999999999987643321   112334444443332     


Q ss_pred             cccCcccHHHHHHHHHHhhc--CCCCCceEEecCCccc
Q 021819          224 HWLGAVPVKDVAKAQVLLFE--SPAASGRYLCTNGIYQ  259 (307)
Q Consensus       224 ~~~~~i~~~dva~~~~~~~~--~~~~~g~~~~~~~~~~  259 (307)
                       ...+..++|+|.++.+++.  .....|..+..|++++
T Consensus       217 -lgR~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~s  253 (258)
T d1ae1a_         217 -MGRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFT  253 (258)
T ss_dssp             -TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             -CCCCcCHHHHHHHHHHHhChhhCCCcCcEEEeCCCee
Confidence             2447899999999999884  4456788777777665

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.95  E-value=1.3e-26  Score=191.41  Aligned_cols=219  Identities=16%  Similarity=0.108  Sum_probs=158.9

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ++++|+++||||+++||+++++.|+++|+ +|++.+|+.++.+.+....   ..++.++++|++|+++++++++      
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   77 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEF   77 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHh---CCceEEEEcccCCHHHHHHHHHHHHHHc
Confidence            36789999999999999999999999999 8999999776554433322   1278899999999999888775      


Q ss_pred             -CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 -GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                       ++|++|||||....    ....+++.+.+++|+.++.++.+++.    +++.++||++||..+..+.++.         
T Consensus        78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~---------  148 (254)
T d1hdca_          78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALT---------  148 (254)
T ss_dssp             SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC---------
T ss_pred             CCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccch---------
Confidence             67999999997654    22345678999999999999988773    4456899999998876655443         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCC-CCCCCccc
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSK-DTQEYHWL  226 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  226 (307)
                                 ..|+.+|...+.+.+.++.+   +||++++|.||.|.++..           ........ .......+
T Consensus       149 -----------~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~-----------~~~~~~~~~~~~~~~pl  206 (254)
T d1hdca_         149 -----------SSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMT-----------AETGIRQGEGNYPNTPM  206 (254)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH-----------HHHTCCCSTTSCTTSTT
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccc-----------hhcCHHHHHHHHhCCCC
Confidence                       46888888887777777655   589999999999976531           11111111 11111112


Q ss_pred             -Cc-ccHHHHHHHHHHhhcC--CCCCceEEecCCccc
Q 021819          227 -GA-VPVKDVAKAQVLLFES--PAASGRYLCTNGIYQ  259 (307)
Q Consensus       227 -~~-i~~~dva~~~~~~~~~--~~~~g~~~~~~~~~~  259 (307)
                       .+ ..++|+|.++++++..  ....|..+..|+++|
T Consensus       207 ~R~g~~PedvA~~v~fL~S~~a~~itG~~i~vDGG~t  243 (254)
T d1hdca_         207 GRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGWT  243 (254)
T ss_dssp             SSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCCCCCHHHHHHHHHHHhchhhCCCCCceEEeCCCcc
Confidence             23 3689999999998843  335677666665553

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.95  E-value=6.6e-27  Score=192.91  Aligned_cols=222  Identities=18%  Similarity=0.163  Sum_probs=151.7

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +++|+++||||+++||+++++.|+++|+ +|++.+|++.+... ......+ .++..+.+|++|+++++++++       
T Consensus         3 L~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~-~~~~~~g-~~~~~~~~Dvs~~~~v~~~~~~~~~~~G   79 (247)
T d2ew8a1           3 LKDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAE-AAIRNLG-RRVLTVKCDVSQPGDVEAFGKQVISTFG   79 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHH-HHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHH-HHHHHcC-CcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            5689999999999999999999999999 89999987543211 1111111 278899999999999888775       


Q ss_pred             CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                      ++|++|||||....    +...+++.+.+++|+.++.++.+++    ++++.+++|++||..+..+.+..          
T Consensus        80 ~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~----------  149 (247)
T d2ew8a1          80 RCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAY----------  149 (247)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSC----------
T ss_pred             CCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCccc----------
Confidence            68999999998654    2344567999999999999888877    44566899999998876555443          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA  228 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (307)
                                ..|+.+|...+.+.+.++.+   +||++++|.||.|.++.......  ...... .....    .....+
T Consensus       150 ----------~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~--~~~~~~-~~~~~----~~l~r~  212 (247)
T d2ew8a1         150 ----------THYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASAL--SAMFDV-LPNML----QAIPRL  212 (247)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---------------------CTT----SSSCSC
T ss_pred             ----------ccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcccccccc--chhHHH-HHHHh----ccCCCC
Confidence                      45777777666666665544   58999999999998876432210  000111 01110    112346


Q ss_pred             ccHHHHHHHHHHhhcC--CCCCceEEecCCcc
Q 021819          229 VPVKDVAKAQVLLFES--PAASGRYLCTNGIY  258 (307)
Q Consensus       229 i~~~dva~~~~~~~~~--~~~~g~~~~~~~~~  258 (307)
                      ..++|+|+++++++..  ....|..+..|+++
T Consensus       213 ~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~  244 (247)
T d2ew8a1         213 QVPLDLTGAAAFLASDDASFITGQTLAVDGGM  244 (247)
T ss_dssp             CCTHHHHHHHHHHTSGGGTTCCSCEEEESSSC
T ss_pred             CCHHHHHHHHHHHhCchhcCCcCCeEEECCCE
Confidence            7899999999988853  33567766666554

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.95  E-value=5.8e-27  Score=193.71  Aligned_cols=223  Identities=17%  Similarity=0.154  Sum_probs=162.0

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +++|+++||||+++||+++++.|+++|+ +|++.+|+.+..+.+........ ++.++.+|++|+++++++++       
T Consensus         4 L~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (251)
T d1zk4a1           4 LDGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPD-QIQFFQHDSSDEDGWTKLFDATEKAFG   81 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTT-TEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCC-cEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            6789999999999999999999999999 89999997665544433222222 78999999999999888775       


Q ss_pred             CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHH----hcCC-cEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RFGV-RRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                      ++|++|||||.....    ...+++.+.+++|+.++.++.+++.    +++. +++|++||..+..+.+..         
T Consensus        82 ~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~---------  152 (251)
T d1zk4a1          82 PVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSL---------  152 (251)
T ss_dssp             SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTC---------
T ss_pred             CceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCc---------
Confidence            579999999986542    2344578899999999999988874    3343 489999998776554443         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHH-----hcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcc
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAE-----KHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~-----~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                                 ..|+.+|...+.+.+.++.     ++||++++|.||.|.++.......  ...........      ..
T Consensus       153 -----------~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~--~~~~~~~~~~~------pl  213 (251)
T d1zk4a1         153 -----------GAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG--AEEAMSQRTKT------PM  213 (251)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT--HHHHHTSTTTC------TT
T ss_pred             -----------hhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCC--HHHHHHHHhCC------CC
Confidence                       4688888888877776654     358999999999998765332211  11111111111      12


Q ss_pred             cCcccHHHHHHHHHHhhcC--CCCCceEEecCCccc
Q 021819          226 LGAVPVKDVAKAQVLLFES--PAASGRYLCTNGIYQ  259 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~~~  259 (307)
                      ..+..++|+|+++++++..  ....|..+..|+++|
T Consensus       214 ~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~t  249 (251)
T d1zk4a1         214 GHIGEPNDIAYICVYLASNESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCcCHHHHHHHHHHHhCchhCCCcCcEEEECcccc
Confidence            3467999999999988853  335687777777665

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.95  E-value=6.9e-27  Score=193.94  Aligned_cols=226  Identities=17%  Similarity=0.124  Sum_probs=162.2

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccC-C-CCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-P-GAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-~-~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      +++|+++||||+++||+++++.|+++|+ +|++.+|+.+..+..... . .....++..+++|++|+++++++++     
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999 899999976554432221 0 0111268889999999999888775     


Q ss_pred             --CccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 --GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 --~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                        ++|++|||||....     +...+++++.+++|+.++.++.+++    ++++.++||++||..+..+.+..       
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~-------  153 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQ-------  153 (258)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSB-------
T ss_pred             hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCc-------
Confidence              58999999996542     2244567899999999999999877    33456799999998876655443       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCC-----CcchHHHHHHHHcCCCCC
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY-----LNASCAVLQQLLQGSKDT  220 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~  220 (307)
                                   ..|+.+|...+.+.+.++.+   +||++++|.||.|.++.....     ..........+....|  
T Consensus       154 -------------~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p--  218 (258)
T d1iy8a_         154 -------------SGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNP--  218 (258)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCT--
T ss_pred             -------------hHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCC--
Confidence                         45777777777777766654   589999999999987642111     0011222333333222  


Q ss_pred             CCCcccCcccHHHHHHHHHHhhcC--CCCCceEEecCCccc
Q 021819          221 QEYHWLGAVPVKDVAKAQVLLFES--PAASGRYLCTNGIYQ  259 (307)
Q Consensus       221 ~~~~~~~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~~~  259 (307)
                          ...+..++|+|.++++++..  ....|..+..|++++
T Consensus       219 ----l~R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDGG~s  255 (258)
T d1iy8a_         219 ----SKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQS  255 (258)
T ss_dssp             ----TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             ----CCCCcCHHHHHHHHHHHhCchhcCCcCceEEcCcchh
Confidence                34567999999999988853  345677766666554

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.94  E-value=4.1e-27  Score=195.43  Aligned_cols=224  Identities=15%  Similarity=0.145  Sum_probs=146.9

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      ++++|+++||||+++||+++++.|+++|+ +|++.+|+.++.+.... +..... ++..+.+|++|+++++++++     
T Consensus         5 ~LkgK~alVTGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d1xq1a_           5 SLKAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGF-QVTGSVCDASLRPEREKLMQTVSSM   82 (259)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-ceEEEeccCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999 89999997665443322 111122 78899999999988777663     


Q ss_pred             ---CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 ---GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                         .+|++|||||....    +...+++.+.+++|+.++.++.+++    ++++.+++|++||..+..+.+..       
T Consensus        83 ~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~-------  155 (259)
T d1xq1a_          83 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVG-------  155 (259)
T ss_dssp             HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------C-------
T ss_pred             hCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccccc-------
Confidence               37999999997654    2334567899999999999888876    44466799999998776554442       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                                   ..|+.+|...+.+.+.++.+   +||++++|.||.|.++.......  ....+......      ..
T Consensus       156 -------------~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~--~~~~~~~~~~~------pl  214 (259)
T d1xq1a_         156 -------------SIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYD--DEFKKVVISRK------PL  214 (259)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC------------------------------
T ss_pred             -------------ccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhch--HHHHHHHHhCC------CC
Confidence                         45888888877777766655   58999999999998876433211  11111111111      12


Q ss_pred             cCcccHHHHHHHHHHhhc--CCCCCceEEecCCccc
Q 021819          226 LGAVPVKDVAKAQVLLFE--SPAASGRYLCTNGIYQ  259 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~--~~~~~g~~~~~~~~~~  259 (307)
                      ..+..++|+|.++++++.  +....|..+..|++++
T Consensus       215 ~R~~~pedvA~~v~fL~S~~s~~iTG~~i~vDGG~s  250 (259)
T d1xq1a_         215 GRFGEPEEVSSLVAFLCMPAASYITGQTICVDGGLT  250 (259)
T ss_dssp             ---CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEE
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCCcCcEEEeCCCEE
Confidence            346789999999998884  3445687777776654

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.94  E-value=6.2e-27  Score=193.43  Aligned_cols=226  Identities=18%  Similarity=0.161  Sum_probs=163.1

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      ++++|+++||||+++||+++++.|+++|+ +|++.+|+.++.+... ++......++..+++|++|+++++++++     
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999 8999999765543322 1111111268889999999999888775     


Q ss_pred             --CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceec-cCCCCCCccccc
Q 021819           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIV-PNPGWKGKVFDE  148 (307)
Q Consensus        80 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~-~~~~~~~~~~~E  148 (307)
                        ++|++|||||....    +...+++++.+++|+.++.++.+++.    +++.+++|++||..+.. +.++.       
T Consensus        81 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~-------  153 (251)
T d1vl8a_          81 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNI-------  153 (251)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSC-------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccc-------
Confidence              58999999997654    23445678999999999999988874    34567999999865422 22221       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                                   ..|+.+|...+.+.+.++.+   +|+++++|.||.|.++....... .....+......|      .
T Consensus       154 -------------~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~-~~~~~~~~~~~~p------l  213 (251)
T d1vl8a_         154 -------------SAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFS-DPEKLDYMLKRIP------L  213 (251)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHT-CHHHHHHHHHTCT------T
T ss_pred             -------------cchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccC-CHHHHHHHHhcCC------C
Confidence                         45888888888877777655   48999999999998876432211 1233334444332      2


Q ss_pred             cCcccHHHHHHHHHHhhcC--CCCCceEEecCCccc
Q 021819          226 LGAVPVKDVAKAQVLLFES--PAASGRYLCTNGIYQ  259 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~~~  259 (307)
                      ..+..++|+|+++++++..  ....|..+..|+++|
T Consensus       214 ~R~~~pedvA~~v~fL~S~~a~~itG~~i~vDGG~t  249 (251)
T d1vl8a_         214 GRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGWT  249 (251)
T ss_dssp             SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCHHHHHHHHHHHhCchhCCCcCcEEEeCcCee
Confidence            3467899999999988853  345687776676664

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.94  E-value=5.5e-27  Score=195.14  Aligned_cols=229  Identities=17%  Similarity=0.162  Sum_probs=157.9

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC-Cccccc-CCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      +++|+++||||+++||+++++.|+++|+ +|++.+|+... .+.+.. +......++.++++|++|+++++++++     
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            5689999999999999999999999999 89999886432 222211 111111278899999999999988875     


Q ss_pred             --CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                        ++|++|||||....    +...+++.+.+++|+.++.++.+++    ++++.+++|++||..+..+.+..        
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~--------  152 (260)
T d1x1ta1          81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANK--------  152 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC--------
T ss_pred             hCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCc--------
Confidence              57999999997654    2344567899999999998888876    44566799999998876665543        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCC----C-
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT----Q-  221 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~----~-  221 (307)
                                  ..|+.+|...+.+.+.++.+   +||++++|.||.|.++........   ............    + 
T Consensus       153 ------------~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~---~~~~~~~~~~~~~~~~~~  217 (260)
T d1x1ta1         153 ------------SAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISA---LAEKNGVDQETAARELLS  217 (260)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---------------------------CHH
T ss_pred             ------------chhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhh---hhhhcCCChHHHHHHHHH
Confidence                        46888888888777777655   589999999999988764332110   000000000000    0 


Q ss_pred             -CCcccCcccHHHHHHHHHHhhcC--CCCCceEEecCCccc
Q 021819          222 -EYHWLGAVPVKDVAKAQVLLFES--PAASGRYLCTNGIYQ  259 (307)
Q Consensus       222 -~~~~~~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~~~  259 (307)
                       ......+..++|+|+++++++..  ....|..+..|++++
T Consensus       218 ~~~Pl~R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG~t  258 (260)
T d1x1ta1         218 EKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             HHCTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             hcCCCCCCcCHHHHHHHHHHHhChhhCCCcCCEEEECcchh
Confidence             00234578999999999998853  345687777777665

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.94  E-value=1.3e-26  Score=192.76  Aligned_cols=223  Identities=20%  Similarity=0.162  Sum_probs=160.0

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      .+++|+++||||+++||+++++.|+++|+ +|++.+|+.+..+.+.........++..+.+|++|+++++++++      
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF   80 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            36789999999999999999999999999 89999997665544333221222278899999999998888775      


Q ss_pred             -CccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 -GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                       .+|++|||||....     +...+++...+++|+.++.++.+++.    +++.+++|++||..+..+.+..        
T Consensus        81 g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~--------  152 (260)
T d1zema1          81 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNM--------  152 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTB--------
T ss_pred             CCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcch--------
Confidence             57999999997543     23445678999999999999888873    3456799999998876665443        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCC-------------CCcchHHHHHHH
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQP-------------YLNASCAVLQQL  213 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~-------------~~~~~~~~~~~~  213 (307)
                                  ..|+.+|...+.+.+.++.+   +||++++|.||.|.++....             .........+.+
T Consensus       153 ------------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (260)
T d1zema1         153 ------------AAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQM  220 (260)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHH
T ss_pred             ------------HHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHH
Confidence                        45777777777777766655   48999999999998764211             011112222233


Q ss_pred             HcCCCCCCCCcccCcccHHHHHHHHHHhhcC--CCCCceEEecC
Q 021819          214 LQGSKDTQEYHWLGAVPVKDVAKAQVLLFES--PAASGRYLCTN  255 (307)
Q Consensus       214 ~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~--~~~~g~~~~~~  255 (307)
                      ....|      ...+..++|+|.++++++..  ....|..+..|
T Consensus       221 ~~~~P------l~R~g~pedvA~~v~fL~S~~s~~itG~~i~VD  258 (260)
T d1zema1         221 IGSVP------MRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIA  258 (260)
T ss_dssp             HHTST------TSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HhcCC------CCCCcCHHHHHHHHHHHhCchhcCccCCeEEeC
Confidence            33222      34467899999999988853  33456654443

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.94  E-value=9.7e-27  Score=197.41  Aligned_cols=226  Identities=16%  Similarity=0.122  Sum_probs=166.5

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEEEEe
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVFHV   87 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~vi~~   87 (307)
                      |||||||||||||++|++.|.++|+ .|.. +++...                 +.+|++|.+.++++++  ++|+|||+
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~-~v~~-~~~~~~-----------------~~~Dl~~~~~~~~~i~~~~~D~Vih~   61 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGN-LIAL-DVHSKE-----------------FCGDFSNPKGVAETVRKLRPDVIVNA   61 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSE-EEEE-CTTCSS-----------------SCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC-EEEE-ECCCcc-----------------ccCcCCCHHHHHHHHHHcCCCEEEEe
Confidence            4799999999999999999998887 5544 433211                 2379999999999887  56999999


Q ss_pred             ccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHH
Q 021819           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVS  167 (307)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~s  167 (307)
                      ||..............++.|+.++.+++++|++.+. +++++||...++ ...  ..+.+|+++..|.      +.|+.+
T Consensus        62 Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~ss~~~~~-~~~--~~~~~E~~~~~p~------~~y~~~  131 (298)
T d1n2sa_          62 AAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFP-GTG--DIPWQETDATSPL------NVYGKT  131 (298)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSC-CCT--TCCBCTTSCCCCS------SHHHHH
T ss_pred             cccccccccccCccccccccccccccchhhhhcccc-cccccccccccc-CCC--CCCCccccccCCC------chHhhh
Confidence            997765444566778999999999999999998884 688888855444 333  3678898887765      789999


Q ss_pred             HHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCC-CCcccCcccHHHHHHHHHHhhc---
Q 021819          168 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQ-EYHWLGAVPVKDVAKAQVLLFE---  243 (307)
Q Consensus       168 K~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~dva~~~~~~~~---  243 (307)
                      |..+|+++..    ......++|++..++.....   ....+......+.+... +....++++++|+++++..++.   
T Consensus       132 k~~~e~~~~~----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~  204 (298)
T d1n2sa_         132 KLAGEKALQD----NCPKHLIFRTSWVYAGKGNN---FAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVAL  204 (298)
T ss_dssp             HHHHHHHHHH----HCSSEEEEEECSEECSSSCC---HHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhHHh----hhcccccccccceeeccCCc---cchhhhhhhcccceeecccceeecccccchHHHHHHHHHhhhh
Confidence            9999988863    34556677766665443222   23334444455444433 4577889999999999887775   


Q ss_pred             -CCCCCceEEecC-CcccHHHHHHHHHHhC
Q 021819          244 -SPAASGRYLCTN-GIYQFGDFAERVSKLF  271 (307)
Q Consensus       244 -~~~~~g~~~~~~-~~~~~~~~~~~~~~~~  271 (307)
                       .+...+.|++++ +..+..++++.+.+..
T Consensus       205 ~~~~~~~~~n~~~~~~~~~~~~~~~i~~~~  234 (298)
T d1n2sa_         205 NKPEVAGLYHLVAGGTTTWHDYAALVFDEA  234 (298)
T ss_dssp             HCGGGCEEEECCCBSCEEHHHHHHHHHHHH
T ss_pred             ccccccccccccCCCceecHHHHHHHHhhh
Confidence             344557788765 5689999988887654

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.94  E-value=6.3e-27  Score=194.43  Aligned_cols=223  Identities=15%  Similarity=0.069  Sum_probs=162.7

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------Cc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~~   81 (307)
                      +|++|||||+++||+++++.|+++|+ +|++.+|+++..+.+.........++..+++|++|+++++++++       ++
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV   80 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            67899999999999999999999999 89999997655443322111112278899999999999888875       57


Q ss_pred             cEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHh------cCCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           82 KGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR------FGVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        82 d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~------~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                      |++|||||....    +...+++.+.+++|+.++.++.+++.+      .+.+++|++||..+..+.+..          
T Consensus        81 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~----------  150 (257)
T d2rhca1          81 DVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHA----------  150 (257)
T ss_dssp             SEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTC----------
T ss_pred             CEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccc----------
Confidence            999999997654    233456789999999999999998854      345689999998876665553          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCC--------CcchHHHHHHHHcCCCCC
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY--------LNASCAVLQQLLQGSKDT  220 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~--------~~~~~~~~~~~~~~~~~~  220 (307)
                                ..|+.+|...+.+.+.++.+   +||++++|.||.|.++.....        ........+++....|  
T Consensus       151 ----------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~P--  218 (257)
T d2rhca1         151 ----------APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVP--  218 (257)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTST--
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCC--
Confidence                      56888888888888777766   479999999999977542110        0011223333333222  


Q ss_pred             CCCcccCcccHHHHHHHHHHhhc--CCCCCceEEecCCcc
Q 021819          221 QEYHWLGAVPVKDVAKAQVLLFE--SPAASGRYLCTNGIY  258 (307)
Q Consensus       221 ~~~~~~~~i~~~dva~~~~~~~~--~~~~~g~~~~~~~~~  258 (307)
                          ...+..++|+|+++++++.  +....|..+..|+++
T Consensus       219 ----lgR~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~  254 (257)
T d2rhca1         219 ----IGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL  254 (257)
T ss_dssp             ----TSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             ----CCCCcCHHHHHHHHHHHhCchhcCCcCceEEECcCc
Confidence                3457899999999998884  334567776666554

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.94  E-value=1e-26  Score=192.90  Aligned_cols=222  Identities=15%  Similarity=0.087  Sum_probs=158.7

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      .+++|+++||||+++||+++++.|+++|+ +|++.+|+.+..+.+....   ..++..+++|++|+++++++++      
T Consensus         2 ~L~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   77 (256)
T d1k2wa_           2 RLDGKTALITGSARGIGRAFAEAYVREGA-RVAIADINLEAARATAAEI---GPAACAIALDVTDQASIDRCVAELLDRW   77 (256)
T ss_dssp             TTTTEEEEEETCSSHHHHHHHHHHHHTTE-EEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHh---CCceEEEEeeCCCHHHHHHHHHHHHHHh
Confidence            47799999999999999999999999999 8999999765544433221   1178899999999999888875      


Q ss_pred             -CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHH----hc-CCcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 -GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAK----RF-GVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~-~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                       .+|++|||||.....    ...+++.+.+++|+.++..+.+++.    ++ ..++||++||..+..+.+..        
T Consensus        78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~--------  149 (256)
T d1k2wa_          78 GSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALV--------  149 (256)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTC--------
T ss_pred             CCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccc--------
Confidence             579999999976542    2345678999999999999988753    22 34789999998876555443        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcc--------hHHHHHHHHcCCC
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNA--------SCAVLQQLLQGSK  218 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~--------~~~~~~~~~~~~~  218 (307)
                                  ..|+.+|...+.+.+.++.+   +||++++|.||.+.++........        .....+++.... 
T Consensus       150 ------------~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  216 (256)
T d1k2wa_         150 ------------GVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAV-  216 (256)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHS-
T ss_pred             ------------cchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcC-
Confidence                        46778888777777766654   589999999999988753211000        001111111111 


Q ss_pred             CCCCCcccCcccHHHHHHHHHHhhcC--CCCCceEEecCCc
Q 021819          219 DTQEYHWLGAVPVKDVAKAQVLLFES--PAASGRYLCTNGI  257 (307)
Q Consensus       219 ~~~~~~~~~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~  257 (307)
                           ....+..++|+|.++++++..  ....|..+..|++
T Consensus       217 -----PlgR~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG  252 (256)
T d1k2wa_         217 -----PFGRMGRAEDLTGMAIFLATPEADYIVAQTYNVDGG  252 (256)
T ss_dssp             -----TTSSCBCHHHHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred             -----CCCCCcCHHHHHHHHHHHhCchhCCccCceEEECcc
Confidence                 134577999999999988743  3345766555544

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.94  E-value=2.1e-27  Score=195.49  Aligned_cols=220  Identities=17%  Similarity=0.119  Sum_probs=158.6

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeC-CCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------Cc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVF-PGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~~   81 (307)
                      +.|+||||+++||+++++.|+++|+ +|+..++ +....+.+.........++..+++|++|+++++++++       ++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   80 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            5899999999999999999999999 7877554 4333333322111111278899999999999888775       57


Q ss_pred             cEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCCCc
Q 021819           82 KGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (307)
Q Consensus        82 d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~  153 (307)
                      |++|||||....    +...+++++.+++|+.++.++.+++    ++++-++||++||..+..+.++.            
T Consensus        81 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~------------  148 (244)
T d1edoa_          81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQ------------  148 (244)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC------------
T ss_pred             CccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCC------------
Confidence            999999997654    2344567899999999999888877    44466899999998887666553            


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCccc
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVP  230 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  230 (307)
                              ..|+.+|...+.+.+.++.+   +|+++++|.||.|.++.....   .....+......|      ...+..
T Consensus       149 --------~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~---~~~~~~~~~~~~p------l~R~~~  211 (244)
T d1edoa_         149 --------ANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL---GEDMEKKILGTIP------LGRTGQ  211 (244)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT---CHHHHHHHHTSCT------TCSCBC
T ss_pred             --------HHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHh---hHHHHHHHHhcCC------CCCCcC
Confidence                    45777777777666666554   589999999999987653322   2233334333322      345779


Q ss_pred             HHHHHHHHHHhhcCCC---CCceEEecCCccc
Q 021819          231 VKDVAKAQVLLFESPA---ASGRYLCTNGIYQ  259 (307)
Q Consensus       231 ~~dva~~~~~~~~~~~---~~g~~~~~~~~~~  259 (307)
                      ++|+|+++.+++.++.   ..|..+..|++++
T Consensus       212 p~dvA~~v~fLa~S~~a~~itG~~i~vdGG~s  243 (244)
T d1edoa_         212 PENVAGLVEFLALSPAASYITGQAFTIDGGIA  243 (244)
T ss_dssp             HHHHHHHHHHHHHCSGGGGCCSCEEEESTTTT
T ss_pred             HHHHHHHHHHHHCCchhcCCcCCeEEeCCCee
Confidence            9999999998865544   4577777666665

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.94  E-value=5.9e-27  Score=199.96  Aligned_cols=235  Identities=14%  Similarity=0.085  Sum_probs=162.7

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccc--ccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL--FALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      +++||||||||||||++|+++|+++|+ +|++++|+.......  .........+++++++|++|.+++.+.+++++.++
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~   80 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVI   80 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhh
Confidence            356899999999999999999999999 999999976543211  10000011178999999999999999999999999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHH
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (307)
                      |+++....           ..|..++.+++++|++.+..++++.||.+.....         +..+..+      ...|.
T Consensus        81 ~~~~~~~~-----------~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~---------~~~~~~~------~~~~~  134 (312)
T d1qyda_          81 SALAGGVL-----------SHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDI---------MEHALQP------GSITF  134 (312)
T ss_dssp             ECCCCSSS-----------STTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTS---------CCCCCSS------TTHHH
T ss_pred             hhhhhccc-----------ccchhhhhHHHHHHHHhcCCcEEEEeeccccCCC---------cccccch------hhhhh
Confidence            99876432           3455667888999998877778888874432111         1111111      13456


Q ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCC---CCCcccCcccHHHHHHHHHHhh
Q 021819          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT---QEYHWLGAVPVKDVAKAQVLLF  242 (307)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~dva~~~~~~~  242 (307)
                      ..|..++++.    ...+++++++||+.+||+............   ...+....   .+++.++|++++|+|++++.++
T Consensus       135 ~~~~~~~~~~----~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l  207 (312)
T d1qyda_         135 IDKRKVRRAI----EAASIPYTYVSSNMFAGYFAGSLAQLDGHM---MPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSI  207 (312)
T ss_dssp             HHHHHHHHHH----HHTTCCBCEEECCEEHHHHTTTSSCTTCCS---SCCSSEECCBTTSCSEEEEECHHHHHHHHHHHT
T ss_pred             HHHHHHHHhh----cccccceEEeccceeecCCccchhhHHHHh---hhcccccccccccccccceeeHHHHHHHHHHHh
Confidence            6666655544    467999999999999997544321111000   01112221   2457899999999999999999


Q ss_pred             cCCCCCc-e-EEec-CCcccHHHHHHHHHHhCCCCCCC
Q 021819          243 ESPAASG-R-YLCT-NGIYQFGDFAERVSKLFPEFPVH  277 (307)
Q Consensus       243 ~~~~~~g-~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~  277 (307)
                      +++...+ . |++. ++.+|+.++++.+.+.+ +.+.+
T Consensus       208 ~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~-g~~~~  244 (312)
T d1qyda_         208 DDPQTLNKTMYIRPPMNILSQKEVIQIWERLS-EQNLD  244 (312)
T ss_dssp             TCGGGSSSEEECCCGGGEEEHHHHHHHHHHHH-TCCCE
T ss_pred             cCccccCceEEEeCCCcCCCHHHHHHHHHHHH-CCCCe
Confidence            9887654 3 5554 45699999999999998 55544

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.94  E-value=2.2e-26  Score=190.82  Aligned_cols=222  Identities=18%  Similarity=0.154  Sum_probs=155.8

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------Ccc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GCK   82 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~~d   82 (307)
                      |.++||||+++||+++++.|+++|+ +|++.+|+++..+.+.........++..+++|++|+++++++++       ++|
T Consensus         2 KValITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   80 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   80 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence            4679999999999999999999999 89999998765544332211112278899999999999888775       589


Q ss_pred             EEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHh----cC-CcEEEEecCcceeccCCCCCCcccccCCCCc
Q 021819           83 GVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR----FG-VRRVVVTSSISAIVPNPGWKGKVFDETSWTD  153 (307)
Q Consensus        83 ~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~  153 (307)
                      ++|||||....    +.+.+++.+.+++|+.++.++.+++..    .+ .+++|++||..+..+.+..            
T Consensus        81 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~------------  148 (255)
T d1gega_          81 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPEL------------  148 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTB------------
T ss_pred             EEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCccc------------
Confidence            99999997654    234456789999999999999888632    33 4679999998775554443            


Q ss_pred             hhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCC--------cchHHHHHHHHcCCCCCCC
Q 021819          154 LEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL--------NASCAVLQQLLQGSKDTQE  222 (307)
Q Consensus       154 ~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~--------~~~~~~~~~~~~~~~~~~~  222 (307)
                              ..|+.+|...+.+.+.++.+   +||++++|.||.|.++......        .........+....     
T Consensus       149 --------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  215 (255)
T d1gega_         149 --------AVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRI-----  215 (255)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTC-----
T ss_pred             --------ccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcC-----
Confidence                    45777777777777666644   5899999999999765421100        00001111111111     


Q ss_pred             CcccCcccHHHHHHHHHHhhcC--CCCCceEEecCCcc
Q 021819          223 YHWLGAVPVKDVAKAQVLLFES--PAASGRYLCTNGIY  258 (307)
Q Consensus       223 ~~~~~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~~  258 (307)
                       ....+..++|+|+++++++..  ....|..+..|+++
T Consensus       216 -pl~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~  252 (255)
T d1gega_         216 -TLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGM  252 (255)
T ss_dssp             -TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             -CCCCCcCHHHHHHHHHHHhCchhCCccCcEEEecCCE
Confidence             134467999999999988853  33457776666554

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.94  E-value=2.5e-26  Score=185.70  Aligned_cols=196  Identities=18%  Similarity=0.184  Sum_probs=135.9

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHh-cCccEEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV-EGCKGVFH   86 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~-~~~d~vi~   86 (307)
                      .|+|+|||||||||++|+++|+++|+ .+|++..|++.....          ++.   .+..|..++.+.+ ..+|.|||
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~~----------~~~---~~~~d~~~~~~~~~~~~d~vi~   68 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHP----------RLD---NPVGPLAELLPQLDGSIDTAFC   68 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCT----------TEE---CCBSCHHHHGGGCCSCCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhcc----------ccc---ccccchhhhhhccccchheeee
Confidence            47999999999999999999999997 357777765432110          332   3444444444333 46899999


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHH
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (307)
                      |+|.....  ........+.|+.++.+++++|++.++++++++||..+ ++...                     +.|+.
T Consensus        69 ~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~-~~~~~---------------------~~y~~  124 (212)
T d2a35a1          69 CLGTTIKE--AGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGA-DAKSS---------------------IFYNR  124 (212)
T ss_dssp             CCCCCHHH--HSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTC-CTTCS---------------------SHHHH
T ss_pred             eeeeeccc--cccccccccchhhhhhhccccccccccccccccccccc-ccccc---------------------cchhH
Confidence            98764321  22346788999999999999999999999999998654 22211                     56999


Q ss_pred             HHHHHHHHHHHHHHhcCC-cEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCC
Q 021819          167 SKTLAEKAAWEFAEKHGV-DVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP  245 (307)
Q Consensus       167 sK~~~e~~~~~~~~~~~i-~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~  245 (307)
                      +|..+|+.++    +.++ +++++||+.|||+........   .    ............+.++|++|+|++++.+++++
T Consensus       125 ~K~~~E~~l~----~~~~~~~~I~Rp~~v~G~~~~~~~~~---~----~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~  193 (212)
T d2a35a1         125 VKGELEQALQ----EQGWPQLTIARPSLLFGPREEFRLAE---I----LAAPIARILPGKYHGIEACDLARALWRLALEE  193 (212)
T ss_dssp             HHHHHHHHHT----TSCCSEEEEEECCSEESTTSCEEGGG---G----TTCCCC----CHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHhhhcc----ccccccceeeCCcceeCCcccccHHH---H----HHHHHhhccCCCCcEEEHHHHHHHHHHHHcCC
Confidence            9999998875    4566 599999999999876532110   0    01111111123345699999999999999876


Q ss_pred             CCCceEE
Q 021819          246 AASGRYL  252 (307)
Q Consensus       246 ~~~g~~~  252 (307)
                      ..+..|+
T Consensus       194 ~~g~~~~  200 (212)
T d2a35a1         194 GKGVRFV  200 (212)
T ss_dssp             CSEEEEE
T ss_pred             CCCCEEE
Confidence            6533343

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.94  E-value=6.8e-26  Score=188.27  Aligned_cols=225  Identities=13%  Similarity=0.116  Sum_probs=157.8

Q ss_pred             ccCCcEEEEeCCch--hhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            6 EKEEETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG--~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      ++++|+++||||+|  +||++++++|+++|+ +|++.+|++...+.......... +...+++|++|+++++++++    
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~   82 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALG-GALLFRADVTQDEELDALFAGVKE   82 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTT-CCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHhhhccC-cccccccccCCHHHHHHHHHHHHH
Confidence            56789999999998  899999999999999 88888887544333222211122 56789999999999888775    


Q ss_pred             ---CccEEEEeccCCCC--------CCCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCccc
Q 021819           80 ---GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVF  146 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~  146 (307)
                         ++|++||||+....        +...+++...+++|+.++..+.+++...  ..+++|++||..+..+.+..     
T Consensus        83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~~-----  157 (256)
T d1ulua_          83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKY-----  157 (256)
T ss_dssp             HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTC-----
T ss_pred             hcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCCc-----
Confidence               57999999987532        2223346778999999999999988644  12689999998776554443     


Q ss_pred             ccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCC
Q 021819          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (307)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (307)
                                     ..|+.+|...+.+.+.++.+   +|+++++|.||.|.++...... ......+......|     
T Consensus       158 ---------------~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~-~~~~~~~~~~~~~p-----  216 (256)
T d1ulua_         158 ---------------NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIP-GFTKMYDRVAQTAP-----  216 (256)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------CHHHHHHHHHHST-----
T ss_pred             ---------------hHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchh-hhHHHHHHHHhcCC-----
Confidence                           56888888888887777665   4899999999999887654331 12233333333322     


Q ss_pred             cccCcccHHHHHHHHHHhhcC--CCCCceEEecCCccc
Q 021819          224 HWLGAVPVKDVAKAQVLLFES--PAASGRYLCTNGIYQ  259 (307)
Q Consensus       224 ~~~~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~~~  259 (307)
                       ...+..++|+|+++++++..  ....|..+..|++++
T Consensus       217 -l~R~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~  253 (256)
T d1ulua_         217 -LRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYH  253 (256)
T ss_dssp             -TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             -CCCCcCHHHHHHHHHHHhCchhCCccCCeEEECcCEe
Confidence             24467899999999988854  335687777776654

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.93  E-value=7.1e-26  Score=185.79  Aligned_cols=200  Identities=15%  Similarity=0.093  Sum_probs=150.4

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCC------eEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYT------SINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~------~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      +.||||||+++||+++++.|+++|++      .|+..+|+.+..+.+.........++..+.+|++|+++++++++    
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            36899999999999999999999983      28888887665544332211122278889999999999888775    


Q ss_pred             ---CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 ---GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                         .+|++|||||....    +...+++.+.+++|+.++.++.+++    ++++.+++|++||.++..+.++.       
T Consensus        82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~-------  154 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHS-------  154 (240)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC-------
T ss_pred             HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCC-------
Confidence               57999999997654    2334567899999999999888877    44566799999998876665543       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                                   ..|+.+|...+.+.+.++.+   +|+++++|.||.|.++........                  ..
T Consensus       155 -------------~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~------------------~~  203 (240)
T d2bd0a1         155 -------------SIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDE------------------MQ  203 (240)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCST------------------TG
T ss_pred             -------------hHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHh------------------hH
Confidence                         46888887777777766554   589999999999988764332110                  12


Q ss_pred             cCcccHHHHHHHHHHhhcCCCC
Q 021819          226 LGAVPVKDVAKAQVLLFESPAA  247 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~~~~  247 (307)
                      ..+..++|+|+++++++..+..
T Consensus       204 ~~~~~PedvA~~v~~l~s~~~~  225 (240)
T d2bd0a1         204 ALMMMPEDIAAPVVQAYLQPSR  225 (240)
T ss_dssp             GGSBCHHHHHHHHHHHHTSCTT
T ss_pred             hcCCCHHHHHHHHHHHHcCCcc
Confidence            2356899999999999987653

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.3e-25  Score=182.40  Aligned_cols=224  Identities=15%  Similarity=0.091  Sum_probs=164.3

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc---C
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE---G   80 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~---~   80 (307)
                      |.++++|+++||||+++||+++++.|+++|+ +|++.+|++++.+.+.+..     +++...+|+.+.+.++...+   +
T Consensus         1 m~~l~gK~alITGas~GIG~aia~~la~~G~-~Vi~~~r~~~~l~~~~~~~-----~~~~~~~d~~~~~~~~~~~~~~~~   74 (245)
T d2ag5a1           1 MGRLDGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYP-----GIQTRVLDVTKKKQIDQFANEVER   74 (245)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGST-----TEEEEECCTTCHHHHHHHHHHCSC
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcc-----CCceeeeecccccccccccccccc
Confidence            4457899999999999999999999999999 9999999866554444322     67888899988776665553   7


Q ss_pred             ccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCccee-ccCCCCCCcccccCCC
Q 021819           81 CKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAI-VPNPGWKGKVFDETSW  151 (307)
Q Consensus        81 ~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~-~~~~~~~~~~~~E~~~  151 (307)
                      +|++||+||....    +...+.+...+++|+.++..+.+++.    +.+.+++|++||..+. .+.+..          
T Consensus        75 id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~----------  144 (245)
T d2ag5a1          75 LDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNR----------  144 (245)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTB----------
T ss_pred             ceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccch----------
Confidence            8999999997765    22344678999999999999988774    3455789999986542 222221          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCC---CcchHHHHHHHHcCCCCCCCCcc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPY---LNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                                ..|+.+|...+.+.+.++.+   +||++++|.||.|.++.....   ........+......|      .
T Consensus       145 ----------~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~p------l  208 (245)
T d2ag5a1         145 ----------CVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQK------T  208 (245)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCT------T
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCC------C
Confidence                      56999999998888888766   489999999999987653211   1111223333333322      3


Q ss_pred             cCcccHHHHHHHHHHhhcC--CCCCceEEecCCccc
Q 021819          226 LGAVPVKDVAKAQVLLFES--PAASGRYLCTNGIYQ  259 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~~~  259 (307)
                      ..+..++|+|+++.+++..  ....|..+..|+++|
T Consensus       209 ~R~~~pedva~~v~fL~s~~s~~iTG~~i~VDGG~s  244 (245)
T d2ag5a1         209 GRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGWS  244 (245)
T ss_dssp             SSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             CCCcCHHHHHHHHHHHhChhhCCCcCceEEeCCCcC
Confidence            4578999999999998863  345688777777765

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.93  E-value=2.8e-25  Score=185.12  Aligned_cols=227  Identities=14%  Similarity=0.133  Sum_probs=153.1

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccC-CC--CCCCceEEEEcccCChhHHHHHhc---
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-PG--AGDANLRVFEADVLDSGAVSRAVE---   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-~~--~~~~~~~~i~~D~~d~~~~~~~~~---   79 (307)
                      .+++|+++||||+++||+++++.|+++|+ +|++.+|+.+..+.+... ..  ....++..+++|++|+++++++++   
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~   80 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL   80 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999 899999976654433221 11  111268999999999999888775   


Q ss_pred             ----CccEEEEeccCCCC--------CCCCChhhhhhhhhHHHHHHHHHHHHhc---CCcEEEEecCcc-eeccCCCCCC
Q 021819           80 ----GCKGVFHVASPCTL--------EDPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSIS-AIVPNPGWKG  143 (307)
Q Consensus        80 ----~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~iSS~~-~~~~~~~~~~  143 (307)
                          ++|++|||||....        ..+.++++..+++|+.++.++.+++.+.   +.+.+|+++|+. ...+.+..  
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~~~--  158 (264)
T d1spxa_          81 GKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDF--  158 (264)
T ss_dssp             HHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTTS--
T ss_pred             HHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCCCc--
Confidence                68999999997532        1133457889999999999988887432   124566666644 33344332  


Q ss_pred             cccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCC------cchHHHHHHHH
Q 021819          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL------NASCAVLQQLL  214 (307)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~------~~~~~~~~~~~  214 (307)
                                        ..|+.+|...+.+.+.++.+   +||++++|.||.|.++......      ...........
T Consensus       159 ------------------~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  220 (264)
T d1spxa_         159 ------------------PYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMK  220 (264)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHH
T ss_pred             ------------------hhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHH
Confidence                              45777777777777666654   5899999999999887543220      11111222222


Q ss_pred             cCCCCCCCCcccCcccHHHHHHHHHHhhcC---CCCCceEEecCCccc
Q 021819          215 QGSKDTQEYHWLGAVPVKDVAKAQVLLFES---PAASGRYLCTNGIYQ  259 (307)
Q Consensus       215 ~~~~~~~~~~~~~~i~~~dva~~~~~~~~~---~~~~g~~~~~~~~~~  259 (307)
                      ...|      ...+..++|+|+++++++..   ....|..+..|++++
T Consensus       221 ~~~P------l~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~s  262 (264)
T d1spxa_         221 ECVP------AGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS  262 (264)
T ss_dssp             HHCT------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             hcCC------CCCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCChh
Confidence            2211      33467899999999998853   335687777666654

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.93  E-value=6.3e-26  Score=187.58  Aligned_cols=224  Identities=17%  Similarity=0.132  Sum_probs=155.8

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------   79 (307)
                      +++|+++||||+++||+++++.|+++|+ +|++.+|+.+..+.+.....   .+..++++|++|+++++++++       
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   79 (253)
T d1hxha_           4 LQGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELG---ERSMFVRHDVSSEADWTLVMAAVQRRLG   79 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHC---TTEEEECCCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhC---CCeEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999999 89999997655444332211   167889999999988887775       


Q ss_pred             CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHhc---CCcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           80 GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        80 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      .+|++|||||....    +...+++++.+++|+.++.++.+++.++   ..++||++||..+..+.+..           
T Consensus        80 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~~~-----------  148 (253)
T d1hxha_          80 TLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQY-----------  148 (253)
T ss_dssp             SCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTB-----------
T ss_pred             CCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCcccc-----------
Confidence            57999999997654    2334567899999999999888887432   23789999998876554442           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHh-----cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccC
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                               ..|+.+|...+.+.+.++.+     ++|++++|.||.|.++........  ...+.........  .....
T Consensus       149 ---------~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~--~~~~~~~~~~~~~--~~~gr  215 (253)
T d1hxha_         149 ---------AGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPK--GVSKEMVLHDPKL--NRAGR  215 (253)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCT--TCCHHHHBCBTTT--BTTCC
T ss_pred             ---------ccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcc--hhhHHHHHhCccc--cccCC
Confidence                     45777777777776655533     359999999999977532110000  0000111111100  01234


Q ss_pred             cccHHHHHHHHHHhhcC--CCCCceEEecCCcc
Q 021819          228 AVPVKDVAKAQVLLFES--PAASGRYLCTNGIY  258 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~~  258 (307)
                      +..++|+|+++++++..  ....|..+..|+++
T Consensus       216 ~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG~  248 (253)
T d1hxha_         216 AYMPERIAQLVLFLASDESSVMSGSELHADNSI  248 (253)
T ss_dssp             EECHHHHHHHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred             CCCHHHHHHHHHHHhChhhCCCcCcEEEECccH
Confidence            67899999999988853  34567766666554

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.93  E-value=2.6e-25  Score=181.91  Aligned_cols=215  Identities=14%  Similarity=0.076  Sum_probs=153.3

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCCh-hHHHHHhcCccEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS-GAVSRAVEGCKGVF   85 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~-~~~~~~~~~~d~vi   85 (307)
                      +++|+++||||+++||+++++.|+++|+ +|++.+|+++..+.   .      +.+++.+|+++. +.+.+.+.++|++|
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga-~V~~~~r~~~~l~~---~------~~~~~~~Dv~~~~~~~~~~~g~iD~lV   71 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELLKR---S------GHRYVVCDLRKDLDLLFEKVKEVDILV   71 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHH---T------CSEEEECCTTTCHHHHHHHSCCCSEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHh---c------CCcEEEcchHHHHHHHHHHhCCCcEEE
Confidence            3579999999999999999999999999 89999997543322   2      456788999864 44555566899999


Q ss_pred             EeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhh
Q 021819           86 HVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYC  157 (307)
Q Consensus        86 ~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~  157 (307)
                      ||||....    +...+++.+.+++|+.++..+.+++    ++++.+++|++||.....+.+..                
T Consensus        72 nnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~----------------  135 (234)
T d1o5ia_          72 LNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENL----------------  135 (234)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTB----------------
T ss_pred             ecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccccccccccc----------------
Confidence            99997554    2234557889999999988888876    44566789999997765444332                


Q ss_pred             cccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHH
Q 021819          158 KSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDV  234 (307)
Q Consensus       158 ~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dv  234 (307)
                          ..|+.+|...+.+.+.++.+   +||++++|.||.+.++.......  ....+......|      ...+..++|+
T Consensus       136 ----~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~--~~~~~~~~~~~p------l~R~~~pedi  203 (234)
T d1o5ia_         136 ----YTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLS--EEKKKQVESQIP------MRRMAKPEEI  203 (234)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSC--HHHHHHHHTTST------TSSCBCHHHH
T ss_pred             ----ccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcC--HHHHHHHHhcCC------CCCCcCHHHH
Confidence                35677777777666666544   58999999999998875432211  122223333222      3457899999


Q ss_pred             HHHHHHhhcC--CCCCceEEecCCccc
Q 021819          235 AKAQVLLFES--PAASGRYLCTNGIYQ  259 (307)
Q Consensus       235 a~~~~~~~~~--~~~~g~~~~~~~~~~  259 (307)
                      |.++++++..  ....|..+..|++++
T Consensus       204 A~~v~fL~S~~s~~itG~~i~vDGG~s  230 (234)
T d1o5ia_         204 ASVVAFLCSEKASYLTGQTIVVDGGLS  230 (234)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHHHhChhhcCCcCcEEEECcccc
Confidence            9999988843  335577776666654

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.93  E-value=3.8e-25  Score=185.07  Aligned_cols=230  Identities=13%  Similarity=0.140  Sum_probs=155.6

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccC-CCC--CCCceEEEEcccCChhHHHHHhc---
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-PGA--GDANLRVFEADVLDSGAVSRAVE---   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-~~~--~~~~~~~i~~D~~d~~~~~~~~~---   79 (307)
                      .+++|+++||||+++||+++++.|+++|+ +|++.+|+.++.+.+... ...  ...++..+++|++|+++++++++   
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga-~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   80 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL   80 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999 899999986654433221 111  12268899999999999888775   


Q ss_pred             ----CccEEEEeccCCCCCCC--------CChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecC-cceeccCCCCC
Q 021819           80 ----GCKGVFHVASPCTLEDP--------VDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSS-ISAIVPNPGWK  142 (307)
Q Consensus        80 ----~~d~vi~~a~~~~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS-~~~~~~~~~~~  142 (307)
                          ++|++|||||.......        .+.+.+.+++|+.++.++.+++..    .+ +.+|+++| .++..+.+.. 
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~Ss~a~~~~~~~~-  158 (272)
T d1xkqa_          81 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDF-  158 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSS-
T ss_pred             HHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC-CccccccchhccccCCCCc-
Confidence                57999999997654211        113678899999999999988743    33 34555555 3444444442 


Q ss_pred             CcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCc--chHHHHHHHHcCC
Q 021819          143 GKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN--ASCAVLQQLLQGS  217 (307)
Q Consensus       143 ~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~--~~~~~~~~~~~~~  217 (307)
                                         ..|+.+|...+.+.+.++.+   +||++++|.||.|.++.......  .............
T Consensus       159 -------------------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~  219 (272)
T d1xkqa_         159 -------------------LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASH  219 (272)
T ss_dssp             -------------------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHC
T ss_pred             -------------------chhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHH
Confidence                               45777777777777766644   58999999999998775322110  1111111111111


Q ss_pred             CCCCCCcccCcccHHHHHHHHHHhhcC---CCCCceEEecCCccc
Q 021819          218 KDTQEYHWLGAVPVKDVAKAQVLLFES---PAASGRYLCTNGIYQ  259 (307)
Q Consensus       218 ~~~~~~~~~~~i~~~dva~~~~~~~~~---~~~~g~~~~~~~~~~  259 (307)
                      ....  ....+..++|+|+++++++..   ....|..+..|++++
T Consensus       220 ~~~~--PlgR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~  262 (272)
T d1xkqa_         220 KECI--PIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTS  262 (272)
T ss_dssp             TTTC--TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             hcCC--CCCCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHH
Confidence            1111  123467999999999998853   235687777666654

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=4.4e-25  Score=186.51  Aligned_cols=227  Identities=12%  Similarity=0.057  Sum_probs=160.0

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-----CCCCCCCceEEEEcccCChhHHHHHhc-
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-----LPGAGDANLRVFEADVLDSGAVSRAVE-   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~i~~D~~d~~~~~~~~~-   79 (307)
                      .+++|+++||||+++||+++++.|+++|+ +|++.+|+.++.+....     .......++..+++|++|+++++++++ 
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga-~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            46899999999999999999999999999 89999997655433221     111222378899999999999888775 


Q ss_pred             ------CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHh----cCCcEEEEecCcceeccCCCCCCcc
Q 021819           80 ------GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR----FGVRRVVVTSSISAIVPNPGWKGKV  145 (307)
Q Consensus        80 ------~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~iSS~~~~~~~~~~~~~~  145 (307)
                            ++|++|||||....    ....+++...+++|+.++..+.+++..    .+.+++|++||. .....+..    
T Consensus        88 ~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~-~~~~~~~~----  162 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVP-TKAGFPLA----  162 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCC-CTTCCTTC----
T ss_pred             HHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccc-cccccccc----
Confidence                  57999999997654    233456789999999999999988743    345678888763 32333222    


Q ss_pred             cccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcc-hHHHHHHHHcCCCCCC
Q 021819          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNA-SCAVLQQLLQGSKDTQ  221 (307)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~  221 (307)
                                      ..|+.+|...+.+.+.++.+   +||++++|.||.|.++........ ...+.+......    
T Consensus       163 ----------------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~----  222 (297)
T d1yxma1         163 ----------------VHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKI----  222 (297)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGS----
T ss_pred             ----------------ccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcC----
Confidence                            45788888888777777655   489999999999988754322111 111111111111    


Q ss_pred             CCcccCcccHHHHHHHHHHhhcC--CCCCceEEecCCcccH
Q 021819          222 EYHWLGAVPVKDVAKAQVLLFES--PAASGRYLCTNGIYQF  260 (307)
Q Consensus       222 ~~~~~~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~~~~  260 (307)
                        ....+..++|+|.++++++..  ....|..+..|+++++
T Consensus       223 --plgR~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDGG~sl  261 (297)
T d1yxma1         223 --PAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSL  261 (297)
T ss_dssp             --TTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             --CCCCCcCHHHHHHHHHHHhCchhcCcCCcEEEeCcChhh
Confidence              123467899999999998843  3456877777777664

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=5.5e-26  Score=186.61  Aligned_cols=201  Identities=14%  Similarity=0.031  Sum_probs=152.1

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ++++|+++||||+++||+++++.|+++|+ +|++.+|+.++.+.+.........++..+.+|++|+++++++++      
T Consensus         4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~-~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           4 SVTGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            56799999999999999999999999999 89999998766544433211122278899999999999888775      


Q ss_pred             -CccEEEEeccCCCCCCC----CChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCC
Q 021819           80 -GCKGVFHVASPCTLEDP----VDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETS  150 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~  150 (307)
                       .+|++|||||.......    .+.+++.+++|+.|+.++.+++    ++++.++||++||..+..+.+.          
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~----------  152 (244)
T d1yb1a_          83 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPF----------  152 (244)
T ss_dssp             CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHH----------
T ss_pred             CCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCC----------
Confidence             57999999998765332    2345789999999999888876    4556789999999877544322          


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHh------cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCc
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK------HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~------~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (307)
                           +     ..|+.||.+.+.+.+.++.+      .|++++++.||.|.++.....   ..                .
T Consensus       153 -----~-----~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~---~~----------------~  203 (244)
T d1yb1a_         153 -----L-----LAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP---ST----------------S  203 (244)
T ss_dssp             -----H-----HHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT---HH----------------H
T ss_pred             -----c-----HHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCc---Cc----------------c
Confidence                 1     56888998888888777654      379999999999988754322   00                1


Q ss_pred             ccCcccHHHHHHHHHHhhcCCC
Q 021819          225 WLGAVPVKDVAKAQVLLFESPA  246 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~~  246 (307)
                      ...++.++|+|+.++..+..+.
T Consensus       204 ~~~~~~pe~va~~i~~~~~~~~  225 (244)
T d1yb1a_         204 LGPTLEPEEVVNRLMHGILTEQ  225 (244)
T ss_dssp             HCCCCCHHHHHHHHHHHHHTTC
T ss_pred             ccCCCCHHHHHHHHHHHHhcCC
Confidence            1234688999999988877654

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.8e-25  Score=185.20  Aligned_cols=216  Identities=15%  Similarity=0.105  Sum_probs=153.5

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCC-CCCceEEEEcccCChhHHHHHhc------
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGA-GDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ++|++|||||+++||+++++.|+++|+ +|++.+|+.++.+.... +... ...++.++++|++|+++++++++      
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            479999999999999999999999999 89999997655433222 2111 12278899999999999888775      


Q ss_pred             -CccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHh----c--C-CcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 -GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKR----F--G-VRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~--~-~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                       ++|++|||||....    .++++.+++|+.++.++.+++.+    +  + .++||++||..+..+.+..          
T Consensus        81 G~iDilVnnAg~~~~----~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~----------  146 (254)
T d2gdza1          81 GRLDILVNNAGVNNE----KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQ----------  146 (254)
T ss_dssp             SCCCEEEECCCCCCS----SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTC----------
T ss_pred             CCcCeeccccccccc----ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCc----------
Confidence             57999999998654    56889999999988888777732    2  2 3679999998876655543          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHH--HH---HhcCCcEEEEecCceeCCCCCCCCcc-----hHHHHHHHHcCCCCCC
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWE--FA---EKHGVDVVAIHPATCLGPLMQPYLNA-----SCAVLQQLLQGSKDTQ  221 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~--~~---~~~~i~~~ivrp~~v~g~~~~~~~~~-----~~~~~~~~~~~~~~~~  221 (307)
                                ..|+.+|...+.+.+.  ++   .++|+++++|.||.|.++........     .......+....    
T Consensus       147 ----------~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~----  212 (254)
T d2gdza1         147 ----------PVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMI----  212 (254)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHH----
T ss_pred             ----------cchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcC----
Confidence                      4688888887777653  23   24689999999999977643221000     000001110000    


Q ss_pred             CCcccCcccHHHHHHHHHHhhcCCCCCceEEec
Q 021819          222 EYHWLGAVPVKDVAKAQVLLFESPAASGRYLCT  254 (307)
Q Consensus       222 ~~~~~~~i~~~dva~~~~~~~~~~~~~g~~~~~  254 (307)
                        ....+..++|+|+++++++.++...|..+..
T Consensus       213 --p~~r~~~pedvA~~v~fL~s~~~itG~~i~V  243 (254)
T d2gdza1         213 --KYYGILDPPLIANGLITLIEDDALNGAIMKI  243 (254)
T ss_dssp             --HHHCCBCHHHHHHHHHHHHHCTTCSSCEEEE
T ss_pred             --CCCCCcCHHHHHHHHHHHHcCCCCCCCEEEE
Confidence              1224578999999999999877777865433

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.93  E-value=5.9e-25  Score=180.44  Aligned_cols=220  Identities=22%  Similarity=0.185  Sum_probs=156.8

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      .+++|+++||||+++||+++++.|+++|+ +|++.+|+.++.........   .++.++++|++++++++++++      
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dls~~~~i~~~~~~i~~~~   77 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALE---AEAIAVVADVSDPKAVEAVFAEALEEF   77 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCC---SSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcC---CceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            36789999999999999999999999999 99999998765544333221   278899999999999888775      


Q ss_pred             -CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           80 -GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        80 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                       ++|++||||+....    +...+++.+.+++|+.++.++.+++...  +.+.++++||.+. ...++            
T Consensus        78 g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~-~~~~~------------  144 (241)
T d2a4ka1          78 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAG-LGAFG------------  144 (241)
T ss_dssp             SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTT-CCHHH------------
T ss_pred             CCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeecccccc-ccccC------------
Confidence             57999999987654    2334457899999999999999998654  2345666555332 11111            


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcc
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAV  229 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  229 (307)
                         +     ..|+.+|...+.+.+.++++   +|+++++|.||.|-++.....   .....++.....|      ...+.
T Consensus       145 ---~-----~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~---~~~~~~~~~~~~p------~~r~~  207 (241)
T d2a4ka1         145 ---L-----AHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL---PPWAWEQEVGASP------LGRAG  207 (241)
T ss_dssp             ---H-----HHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS---CHHHHHHHHHTST------TCSCB
T ss_pred             ---c-----cccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhh---hHhHHHHHHhCCC------CCCCc
Confidence               1     34666666666666555544   479999999999988764432   2344444444433      34567


Q ss_pred             cHHHHHHHHHHhhcC--CCCCceEEecCCccc
Q 021819          230 PVKDVAKAQVLLFES--PAASGRYLCTNGIYQ  259 (307)
Q Consensus       230 ~~~dva~~~~~~~~~--~~~~g~~~~~~~~~~  259 (307)
                      .++|+|+++.+++..  ....|..+..|++++
T Consensus       208 ~p~dva~~v~fL~S~~s~~itG~~i~vDGG~s  239 (241)
T d2a4ka1         208 RPEEVAQAALFLLSEESAYITGQALYVDGGRS  239 (241)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CHHHHHHHHHHHhcchhCCCcCceEEeCCCcc
Confidence            999999999998853  345687777666655

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.92  E-value=1.3e-24  Score=179.69  Aligned_cols=216  Identities=16%  Similarity=0.102  Sum_probs=151.1

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCC-CCCCCceEEEEcccC-ChhHHHHHhc----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP-GAGDANLRVFEADVL-DSGAVSRAVE----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~i~~D~~-d~~~~~~~~~----   79 (307)
                      ++++|+||||||+++||++++++|+++|+ +|+++.|+.+....+.++. .....++.++.+|++ +.++++++++    
T Consensus         2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~-~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           2 DLTNKNVIFVAALGGIGLDTSRELVKRNL-KNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCC-SEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            46799999999999999999999999999 7777777655544333221 111227889999998 5556666554    


Q ss_pred             ---CccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHh----c---CCcEEEEecCcceeccCCCCCCcccccC
Q 021819           80 ---GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKR----F---GVRRVVVTSSISAIVPNPGWKGKVFDET  149 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~---~~~~~v~iSS~~~~~~~~~~~~~~~~E~  149 (307)
                         ++|++|||||...    .+.+++.+++|+.|+.++.+++.+    .   +.+++|++||..+..+.++.        
T Consensus        81 ~~g~iDilvnnAG~~~----~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~--------  148 (254)
T d1sbya1          81 QLKTVDILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQV--------  148 (254)
T ss_dssp             HHSCCCEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTS--------
T ss_pred             HcCCCCEEEeCCCCCC----HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCC--------
Confidence               6899999999754    467899999999999999998743    1   24689999998886665553        


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCc--chHHHHHHHHcCCCCCCCCc
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN--ASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  224 (307)
                                  ..|+.+|.....+.+.++.+   .|+++++|.||.|.++.......  .....+.+...         
T Consensus       149 ------------~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~---------  207 (254)
T d1sbya1         149 ------------PVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLL---------  207 (254)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHT---------
T ss_pred             ------------HHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccc---------
Confidence                        45777777766666655544   58999999999998863221100  01111111111         


Q ss_pred             ccCcccHHHHHHHHHHhhcCCCCCce-EEecCC
Q 021819          225 WLGAVPVKDVAKAQVLLFESPAASGR-YLCTNG  256 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~~~~g~-~~~~~~  256 (307)
                      .+...+++++|++++.++++.. .|. +.+.++
T Consensus       208 ~~~~~~~e~va~~~~~~~~~~~-tG~vi~vdgG  239 (254)
T d1sbya1         208 SHPTQTSEQCGQNFVKAIEANK-NGAIWKLDLG  239 (254)
T ss_dssp             TSCCEEHHHHHHHHHHHHHHCC-TTCEEEEETT
T ss_pred             cCCCCCHHHHHHHHHHhhhCCC-CCCEEEECCC
Confidence            2234689999999999888765 455 445444

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.92  E-value=5.3e-25  Score=183.02  Aligned_cols=231  Identities=16%  Similarity=0.159  Sum_probs=161.4

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      ++++|++|||||+++||+++++.|+++|+ +|++.+|+.++..... ++......++..+++|++|+++++++++     
T Consensus         6 ~l~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (260)
T d1h5qa_           6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD   84 (260)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            68899999999999999999999999999 8999999876654332 1111111278899999999999888875     


Q ss_pred             --CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHHh-----cCCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 --GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAKR-----FGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                        .+|++|||||....    +...+++++.+++|+.++.++.+++.+     .+.+.++.+||..........    .  
T Consensus        85 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~----~--  158 (260)
T d1h5qa_          85 LGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS----L--  158 (260)
T ss_dssp             SCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE----T--
T ss_pred             hCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccc----c--
Confidence              57999999997654    233456789999999999988887632     344567777764432111100    0  


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                             ........|+.+|...+.+.+.++.+   +|+++++|.||.|.++.....   .....+......|      .
T Consensus       159 -------~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~---~~~~~~~~~~~~p------l  222 (260)
T d1h5qa_         159 -------NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM---DKKIRDHQASNIP------L  222 (260)
T ss_dssp             -------TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS---CHHHHHHHHHTCT------T
T ss_pred             -------ccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhcc---CHHHHHHHHhcCC------C
Confidence                   00011145888888888887777654   589999999999988765433   2333444444333      2


Q ss_pred             cCcccHHHHHHHHHHhhcC--CCCCceEEecCCccc
Q 021819          226 LGAVPVKDVAKAQVLLFES--PAASGRYLCTNGIYQ  259 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~~~  259 (307)
                      ..+..++|+|+++++++..  ....|..+..|++++
T Consensus       223 ~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~  258 (260)
T d1h5qa_         223 NRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQL  258 (260)
T ss_dssp             SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             CCCcCHHHHHHHHHHHhcchhCCCcCceEEECCCee
Confidence            3467899999999988843  335687776666554

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.92  E-value=6.7e-25  Score=183.65  Aligned_cols=230  Identities=15%  Similarity=0.155  Sum_probs=157.3

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccC-CCC--CCCceEEEEcccCChhHHHHHhc----
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-PGA--GDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-~~~--~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      +++|+++||||+++||+++++.|+++|+ +|++.+|+.++.+.+... ...  ...++..+.+|++|+++++++++    
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999 899999976554433221 111  11268899999999998888775    


Q ss_pred             ---CccEEEEeccCCCCCC------CCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCccc
Q 021819           80 ---GCKGVFHVASPCTLED------PVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVF  146 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~  146 (307)
                         ++|++|||||......      ..+++.+.+++|+.++..+.+++.    +.+.++++++||.++..+.++.     
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~-----  155 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGY-----  155 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTS-----
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCC-----
Confidence               5799999999654321      224578899999999998888874    3455678888876654444442     


Q ss_pred             ccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCC--cchHHHHHHHHcCCCCCC
Q 021819          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYL--NASCAVLQQLLQGSKDTQ  221 (307)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~  221 (307)
                                     ..|+.+|...+.+.+.++.+   +||++++|.||.|.++......  ..................
T Consensus       156 ---------------~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~i  220 (274)
T d1xhla_         156 ---------------PYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECI  220 (274)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTC
T ss_pred             ---------------ceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCC
Confidence                           45777777777777666554   5899999999999887432211  011111112111111111


Q ss_pred             CCcccCcccHHHHHHHHHHhhcC---CCCCceEEecCCccc
Q 021819          222 EYHWLGAVPVKDVAKAQVLLFES---PAASGRYLCTNGIYQ  259 (307)
Q Consensus       222 ~~~~~~~i~~~dva~~~~~~~~~---~~~~g~~~~~~~~~~  259 (307)
                        ....+..++|+|+++++++..   ....|..+..|++++
T Consensus       221 --PlgR~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~  259 (274)
T d1xhla_         221 --PVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGST  259 (274)
T ss_dssp             --TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             --CCCCCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCHH
Confidence              123467899999999988842   345687666655543

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.92  E-value=1.2e-25  Score=190.93  Aligned_cols=228  Identities=15%  Similarity=0.162  Sum_probs=160.1

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc---CCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA---LPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      +|||||||||||||++|+++|+++|+ +|++++|++........   +......++.++.+|+.+.+...+.+++++.++
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi   81 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGH-PTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI   81 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeee
Confidence            57999999999999999999999999 99999997655322110   000001168899999999999999999999999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHH
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYP  165 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~  165 (307)
                      |+++..               +..++.++++++...+++++++.||......          +.....+.      ..+.
T Consensus        82 ~~~~~~---------------~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~----------~~~~~~~~------~~~~  130 (307)
T d1qyca_          82 STVGSL---------------QIESQVNIIKAIKEVGTVKRFFPSEFGNDVD----------NVHAVEPA------KSVF  130 (307)
T ss_dssp             ECCCGG---------------GSGGGHHHHHHHHHHCCCSEEECSCCSSCTT----------SCCCCTTH------HHHH
T ss_pred             eccccc---------------ccchhhHHHHHHHHhccccceeeeccccccc----------cccccccc------cccc
Confidence            987652               2334567888888888888888887433211          11111111      2355


Q ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCC---CCCcccCcccHHHHHHHHHHhh
Q 021819          166 VSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT---QEYHWLGAVPVKDVAKAQVLLF  242 (307)
Q Consensus       166 ~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~dva~~~~~~~  242 (307)
                      ..+...+.++.    +.+++++++||+.+||+........    ......+....   .+++.++|++++|+|++++.++
T Consensus       131 ~~~~~~~~~~~----~~~~~~~i~r~~~v~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l  202 (307)
T d1qyca_         131 EVKAKVRRAIE----AEGIPYTYVSSNCFAGYFLRSLAQA----GLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAV  202 (307)
T ss_dssp             HHHHHHHHHHH----HHTCCBEEEECCEEHHHHTTTTTCT----TCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTS
T ss_pred             cccccccchhh----ccCCCceecccceecCCCccchhhh----hhhhhhcccceeeecccccccCCcHHHHHHHHHHHh
Confidence            55555555554    6799999999999999765432111    11111222211   2457899999999999999999


Q ss_pred             cCCCCCc--eEEec-CCcccHHHHHHHHHHhCCCCCCC
Q 021819          243 ESPAASG--RYLCT-NGIYQFGDFAERVSKLFPEFPVH  277 (307)
Q Consensus       243 ~~~~~~g--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  277 (307)
                      +++...+  .|+++ ++.+|+.|+++.+.+++ |.+..
T Consensus       203 ~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~-G~~~~  239 (307)
T d1qyca_         203 DDPRTLNKTLYLRLPANTLSLNELVALWEKKI-DKTLE  239 (307)
T ss_dssp             SCGGGTTEEEECCCGGGEEEHHHHHHHHHHHT-TSCCE
T ss_pred             cChhhcCceeEEeCCCCccCHHHHHHHHHHHH-CCCCc
Confidence            9887655  35554 57799999999999999 55543

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.92  E-value=2.9e-25  Score=183.68  Aligned_cols=216  Identities=12%  Similarity=0.063  Sum_probs=155.9

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-------CccE
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-------GCKG   83 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~~d~   83 (307)
                      +++||||+++||+++++.|+++|+ +|++.+|+.+..+.++..      ...+..+|++|+++++++++       ++|+
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga-~V~i~~r~~~~~~~~~~~------~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDi   74 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAF------AETYPQLKPMSEQEPAELIEAVTSAYGQVDV   74 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHH------HHHCTTSEECCCCSHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhh------hCcEEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence            689999999999999999999999 899999876665554432      22344689988877776664       6899


Q ss_pred             EEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCcccccCCCCch
Q 021819           84 VFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (307)
Q Consensus        84 vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~  154 (307)
                      +|||||....     ....+++.+.+++|+.++.++.+++    ++++.++||++||..+..+.+..             
T Consensus        75 LVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~-------------  141 (252)
T d1zmta1          75 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKEL-------------  141 (252)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTC-------------
T ss_pred             EEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccc-------------
Confidence            9999986532     1233457889999999998888876    44566799999998776555443             


Q ss_pred             hhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCc-----chHHHHHHHHcCCCCCCCCccc
Q 021819          155 EYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLN-----ASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                             ..|+.+|...+.+.+.++.+   +||++++|.||.|.++.......     .............+      ..
T Consensus       142 -------~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~p------l~  208 (252)
T d1zmta1         142 -------STYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTA------LQ  208 (252)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSS------SS
T ss_pred             -------cccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCC------CC
Confidence                   45777777777777666654   58999999999998876544311     11233333333222      23


Q ss_pred             CcccHHHHHHHHHHhhcCCC--CCceEEecCCccc
Q 021819          227 GAVPVKDVAKAQVLLFESPA--ASGRYLCTNGIYQ  259 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~~--~~g~~~~~~~~~~  259 (307)
                      .+..++|+|.++++++....  ..|..+..|++++
T Consensus       209 R~g~pedvA~~v~fL~S~~s~~iTG~~i~vdGG~~  243 (252)
T d1zmta1         209 RLGTQKELGELVAFLASGSCDYLTGQVFWLAGGFP  243 (252)
T ss_dssp             SCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred             CCcCHHHHHHHHHHHhCchhcCCcCCeEEECCCce
Confidence            46799999999999885433  4577777777665

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.92  E-value=1e-24  Score=182.76  Aligned_cols=224  Identities=18%  Similarity=0.124  Sum_probs=156.9

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ++++|+++||||+++||+++++.|+++|+ +|++.+|++++.+.+....   ..++..+.+|++++++++++++      
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   77 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGA-KVAVLDKSAERLAELETDH---GDNVLGIVGDVRSLEDQKQAASRCVARF   77 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHc---CCCeeEEecccccHHHHHHHHHHHHHHh
Confidence            46789999999999999999999999999 9999999765543332211   1168899999999998888765      


Q ss_pred             -CccEEEEeccCCCCCC-----CCC----hhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcc
Q 021819           80 -GCKGVFHVASPCTLED-----PVD----PEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKV  145 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~~-----~~~----~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~  145 (307)
                       .+|++|||||......     ..+    .+++.+++|+.++.++.+++.    +++ +++|++||..+..+.+..    
T Consensus        78 g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~~~~----  152 (276)
T d1bdba_          78 GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNGGG----  152 (276)
T ss_dssp             SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTTSSC----
T ss_pred             CCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCCCCC----
Confidence             6799999999754321     111    367889999999988888773    444 679999987765554443    


Q ss_pred             cccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHhc--CCcEEEEecCceeCCCCCCCCcc-------hHHHHHHHHcC
Q 021819          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEKH--GVDVVAIHPATCLGPLMQPYLNA-------SCAVLQQLLQG  216 (307)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~i~~~ivrp~~v~g~~~~~~~~~-------~~~~~~~~~~~  216 (307)
                                      ..|+.+|...+.+.+.++.+.  +|++++|.||.|.++........       ...+.+.....
T Consensus       153 ----------------~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (276)
T d1bdba_         153 ----------------PLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSV  216 (276)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTT
T ss_pred             ----------------chHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhc
Confidence                            457777777777766665543  59999999999988754332100       01111122221


Q ss_pred             CCCCCCCcccCcccHHHHHHHHHHhhcC---CCCCceEEecCCcccH
Q 021819          217 SKDTQEYHWLGAVPVKDVAKAQVLLFES---PAASGRYLCTNGIYQF  260 (307)
Q Consensus       217 ~~~~~~~~~~~~i~~~dva~~~~~~~~~---~~~~g~~~~~~~~~~~  260 (307)
                      .      ....+..++|+|.++++++..   ....|..+..|+++++
T Consensus       217 ~------PlgR~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~~~  257 (276)
T d1bdba_         217 L------PIGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGLGV  257 (276)
T ss_dssp             C------TTSSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSGGG
T ss_pred             C------CCCCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcChhh
Confidence            1      123467899999999988742   3456877766666654

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=9.6e-25  Score=180.89  Aligned_cols=215  Identities=15%  Similarity=0.139  Sum_probs=151.9

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCCC-CCceEEEEcccCChhHHHHHhc--
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGAG-DANLRVFEADVLDSGAVSRAVE--   79 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~~-~~~~~~i~~D~~d~~~~~~~~~--   79 (307)
                      |..+++|++|||||+++||+++++.|+++|+ +|+..+|+..+.+.+.. +.... ..++..+++|++|+++++++++  
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~   83 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAI   83 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHH
Confidence            6678899999999999999999999999999 89999998665444322 21111 1268889999999999888775  


Q ss_pred             -----CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHHH----hcC--CcEEEEecCcceeccCCCCCCc
Q 021819           80 -----GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAAK----RFG--VRRVVVTSSISAIVPNPGWKGK  144 (307)
Q Consensus        80 -----~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~--~~~~v~iSS~~~~~~~~~~~~~  144 (307)
                           ++|++|||||....    +...+.++..+++|+.++.++.+++.    +++  .+++|++||.++....+.    
T Consensus        84 ~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~----  159 (257)
T d1xg5a_          84 RSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL----  159 (257)
T ss_dssp             HHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC----
T ss_pred             HHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCC----
Confidence                 57999999997654    23345678999999999988877763    333  479999999776432222    


Q ss_pred             ccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh-----cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCC
Q 021819          145 VFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKD  219 (307)
Q Consensus       145 ~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  219 (307)
                               +.+     ..|+.+|...+.+.+.++.+     .++++++|.||.+-++.................     
T Consensus       160 ---------~~~-----~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~-----  220 (257)
T d1xg5a_         160 ---------SVT-----HFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATY-----  220 (257)
T ss_dssp             ---------GGG-----HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHH-----
T ss_pred             ---------ccc-----HHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhcC-----
Confidence                     111     35888888888888776643     589999999998866532111111111111110     


Q ss_pred             CCCCcccCcccHHHHHHHHHHhhcCCC
Q 021819          220 TQEYHWLGAVPVKDVAKAQVLLFESPA  246 (307)
Q Consensus       220 ~~~~~~~~~i~~~dva~~~~~~~~~~~  246 (307)
                          ....++.++|+|+++++++..+.
T Consensus       221 ----~~~r~~~pedvA~~v~fL~s~~a  243 (257)
T d1xg5a_         221 ----EQMKCLKPEDVAEAVIYVLSTPA  243 (257)
T ss_dssp             ----C---CBCHHHHHHHHHHHHHSCT
T ss_pred             ----CCCCCcCHHHHHHHHHHHhCChh
Confidence                23446899999999999987654

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.91  E-value=6.3e-24  Score=179.91  Aligned_cols=227  Identities=13%  Similarity=0.026  Sum_probs=156.5

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      ++++|+++||||+|+||+++++.|+++|+ +|++.+|+..+.+... ++.......+..+++|++|+++++++++     
T Consensus        22 ~l~gK~alITGas~GIG~aiA~~la~~Ga-~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~  100 (294)
T d1w6ua_          22 SFQGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  100 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhh
Confidence            67889999999999999999999999999 9999999865543322 1211111267899999999999887664     


Q ss_pred             --CccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHHH-----hcCCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 --GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAK-----RFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                        ++|++|||||......    ...++...+.+|+.+...+...+.     ..+.+.++.+||..+....+..       
T Consensus       101 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~-------  173 (294)
T d1w6ua_         101 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFV-------  173 (294)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTC-------
T ss_pred             ccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhccccc-------
Confidence              6899999999765422    223456778888888777766542     2234668888886665544442       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcc
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                                   ..|+.+|...+.+.+.++.+   .||++++|.||.|.++....................|      .
T Consensus       174 -------------~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~p------l  234 (294)
T d1w6ua_         174 -------------VPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIP------C  234 (294)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCT------T
T ss_pred             -------------chHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCC------C
Confidence                         45888888888887776655   4899999999999887654332222233344444332      3


Q ss_pred             cCcccHHHHHHHHHHhhcC--CCCCceEEecCCccc
Q 021819          226 LGAVPVKDVAKAQVLLFES--PAASGRYLCTNGIYQ  259 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~~~  259 (307)
                      ..+..++|+|.++.+++..  ....|..+..|++.+
T Consensus       235 ~R~~~pediA~~v~fL~sd~s~~itG~~i~vDGG~~  270 (294)
T d1w6ua_         235 GRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEE  270 (294)
T ss_dssp             SSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred             CCCCCHHHHHHHHHHHhCchhcCCCCcEEEECCChh
Confidence            4567899999999998854  345687766666543

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.91  E-value=5e-24  Score=177.06  Aligned_cols=224  Identities=18%  Similarity=0.123  Sum_probs=154.2

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC-CcccccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      .+++|++|||||+++||+++++.|+++|+ +|+...++..+ .+.+.........++..+++|++|+++++++++     
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   81 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHH
Confidence            36799999999999999999999999999 78776554333 333222211111278899999999999888775     


Q ss_pred             --CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceec-cCCCCCCcccccCC
Q 021819           80 --GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIV-PNPGWKGKVFDETS  150 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~-~~~~~~~~~~~E~~  150 (307)
                        .+|++||+||.....    ...+.+++.+++|+.+..++++.+.++  ..+++++++|..+.. +.+..         
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~~---------  152 (259)
T d1ja9a_          82 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNH---------  152 (259)
T ss_dssp             HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSC---------
T ss_pred             cCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCCc---------
Confidence              579999999986542    234456899999999999999998654  124566666644422 33332         


Q ss_pred             CCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCC----------CCCCcchHHHHHHHHcCC
Q 021819          151 WTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLM----------QPYLNASCAVLQQLLQGS  217 (307)
Q Consensus       151 ~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~----------~~~~~~~~~~~~~~~~~~  217 (307)
                                 ..|+.+|...+.+.+.++.+   .|+++++|.||.+.++..          .........+.+......
T Consensus       153 -----------~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (259)
T d1ja9a_         153 -----------ALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMN  221 (259)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTS
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCC
Confidence                       46888888888887777665   489999999999976421          011111122333333333


Q ss_pred             CCCCCCcccCcccHHHHHHHHHHhhcCCC--CCceEEecCC
Q 021819          218 KDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCTNG  256 (307)
Q Consensus       218 ~~~~~~~~~~~i~~~dva~~~~~~~~~~~--~~g~~~~~~~  256 (307)
                      |      ...+..++|+|+++.+++....  ..|..+..|+
T Consensus       222 p------l~R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDG  256 (259)
T d1ja9a_         222 P------LKRIGYPADIGRAVSALCQEESEWINGQVIKLTG  256 (259)
T ss_dssp             T------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             C------CCCCcCHHHHHHHHHHHhCchhcCCcCceEEeCC
Confidence            2      3457899999999998886433  4576655443

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=5.7e-24  Score=178.84  Aligned_cols=221  Identities=25%  Similarity=0.218  Sum_probs=151.9

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEE---eCCCCCCccc----ccCCCCCCCceEEEEcccCChhHHHHHhc--
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINAT---VFPGSDSSHL----FALPGAGDANLRVFEADVLDSGAVSRAVE--   79 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~---~r~~~~~~~~----~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--   79 (307)
                      .|.||||||+++||+++++.|+++|+ +|+.+   .|+......+    ..+..... ++..+.+|++|++++.++++  
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga-~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~Dv~~~~~~~~~~~~~   79 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPS-QSFKVYATLRDLKTQGRLWEAARALACPPG-SLETLQLDVRDSKSVAAARERV   79 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTT-CCEEEEEEESCGGGTHHHHHHHHHTTCCTT-SEEEEECCTTCHHHHHHHHHTC
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCC-CeEEEEEecCChhhhHHHHHHHHHHhccCC-ceEEEeccccchHhhhhhhhhc
Confidence            46789999999999999999999998 54443   3333332222    12222222 78999999999999998875  


Q ss_pred             ---CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCCccccc
Q 021819           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKGKVFDE  148 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E  148 (307)
                         .+|++||+|+.....    ...+++.+.+++|+.|+.++.+++    ++++.+++|++||+.+..+.+..       
T Consensus        80 ~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~-------  152 (285)
T d1jtva_          80 TEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFN-------  152 (285)
T ss_dssp             TTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTC-------
T ss_pred             cccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCc-------
Confidence               469999999976652    334567899999999998888876    45566899999998876665553       


Q ss_pred             CCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHH------------HHHH
Q 021819          149 TSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAV------------LQQL  213 (307)
Q Consensus       149 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~------------~~~~  213 (307)
                                   ..|+.+|...+.+.+.++.+   +|+++++|.||.|.++............            .+..
T Consensus       153 -------------~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (285)
T d1jtva_         153 -------------DVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYL  219 (285)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHH
T ss_pred             -------------hHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHH
Confidence                         56899999888888877765   4999999999999887654321111111            1100


Q ss_pred             HcCCCCCCCCcccCcccHHHHHHHHHHhhcCCCCCceEEecC
Q 021819          214 LQGSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGRYLCTN  255 (307)
Q Consensus       214 ~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~~~g~~~~~~  255 (307)
                      .....    ........++|+|++++++++.+...-.|..+.
T Consensus       220 ~~~~~----~~~~~~~~PeeVA~~v~~~~~~~~p~~ry~~g~  257 (285)
T d1jtva_         220 AHSKQ----VFREAAQNPEEVAEVFLTALRAPKPTLRYFTTE  257 (285)
T ss_dssp             HHHHH----HHHHHCBCHHHHHHHHHHHHHCSSCCSEEESCS
T ss_pred             HHHhh----hhcccCCCHHHHHHHHHHHHhCCCCCeEEecHH
Confidence            00000    011235689999999999998876554565543

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=5.3e-24  Score=180.09  Aligned_cols=230  Identities=17%  Similarity=0.068  Sum_probs=157.9

Q ss_pred             cccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCc------ccccCCCCCCCceEEEEcccCChhHHHHHh
Q 021819            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS------HLFALPGAGDANLRVFEADVLDSGAVSRAV   78 (307)
Q Consensus         5 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~------~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~   78 (307)
                      |++++|+++||||+++||+++++.|+++|+ +|++.+|+.+...      .+...............+|++|.++.++++
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga-~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v   81 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLV   81 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHH
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHH
Confidence            357899999999999999999999999999 8988887543221      111100000002345567888877766655


Q ss_pred             c-------CccEEEEeccCCCC----CCCCChhhhhhhhhHHHHHHHHHHH----HhcCCcEEEEecCcceeccCCCCCC
Q 021819           79 E-------GCKGVFHVASPCTL----EDPVDPEKELILPAVQGTLNVLEAA----KRFGVRRVVVTSSISAIVPNPGWKG  143 (307)
Q Consensus        79 ~-------~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~iSS~~~~~~~~~~~~  143 (307)
                      +       ++|++|||||....    +...+++++.+++|+.++.++.+++    ++++-++||++||..+..+.++.  
T Consensus        82 ~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~~--  159 (302)
T d1gz6a_          82 KTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQ--  159 (302)
T ss_dssp             HHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC--
T ss_pred             HHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCCc--
Confidence            4       68999999998764    2334567899999999999988886    44566899999998887776654  


Q ss_pred             cccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCC
Q 021819          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDT  220 (307)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  220 (307)
                                        ..|+.+|...+.+.+.++.+   +||++++|.||.+-.+......    .            
T Consensus       160 ------------------~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~----~------------  205 (302)
T d1gz6a_         160 ------------------ANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMP----E------------  205 (302)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSC----H------------
T ss_pred             ------------------HHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCc----H------------
Confidence                              45777777777777766655   5899999999977443322111    1            


Q ss_pred             CCCcccCcccHHHHHHHHHHhhcCC-CCCceE-Ee--------------------cCCcccHHHHHHHHHHhCCCCC
Q 021819          221 QEYHWLGAVPVKDVAKAQVLLFESP-AASGRY-LC--------------------TNGIYQFGDFAERVSKLFPEFP  275 (307)
Q Consensus       221 ~~~~~~~~i~~~dva~~~~~~~~~~-~~~g~~-~~--------------------~~~~~~~~~~~~~~~~~~~~~~  275 (307)
                         ....++.++|+|.++++++... ...|.. .+                    .+++.+..++.+.+.+.. ...
T Consensus       206 ---~~~~~~~PedvA~~v~fL~S~~a~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~-d~~  278 (302)
T d1gz6a_         206 ---DLVEALKPEYVAPLVLWLCHESCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKIC-DFS  278 (302)
T ss_dssp             ---HHHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHT-CCT
T ss_pred             ---hhHhcCCHHHHHHHHHHHcCCCcCCCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHh-Ccc
Confidence               1122457899999999887422 223321 11                    123467788888888776 443

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.90  E-value=1.1e-22  Score=170.20  Aligned_cols=225  Identities=18%  Similarity=0.124  Sum_probs=156.1

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC-Cccccc-CCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      ++++|+++||||+++||+++++.|+++|+ +|++.+|+..+ .+.+.. +..... ++..+++|++|++++.+.++    
T Consensus        15 sL~gK~~lITGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~~~~~~g~-~~~~~~~D~~~~~~v~~~~~~~~~   92 (272)
T d1g0oa_          15 SLEGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGS-DAACVKANVGVVEDIVRMFEEAVK   92 (272)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchHHHHHHHHHHHhhCC-ceeeEeCCCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999 88888776433 222221 111122 78899999999999888775    


Q ss_pred             ---CccEEEEeccCCCCC----CCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceecc-CCCCCCcccccC
Q 021819           80 ---GCKGVFHVASPCTLE----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVP-NPGWKGKVFDET  149 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~-~~~~~~~~~~E~  149 (307)
                         ++|++||+++.....    ...+++.+.+++|+.++..+.+++...  .-+++++++|+.+... .+.         
T Consensus        93 ~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~~~---------  163 (272)
T d1g0oa_          93 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPK---------  163 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSS---------
T ss_pred             HhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccccc---------
Confidence               579999999976542    234456889999999999999998654  2357888887554222 112         


Q ss_pred             CCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCC--------CCcchH-HHHH-HHHcC
Q 021819          150 SWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQP--------YLNASC-AVLQ-QLLQG  216 (307)
Q Consensus       150 ~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~--------~~~~~~-~~~~-~~~~~  216 (307)
                                 ...|+.+|...+.+.+.++.+   +||++++|.||.|.++....        ...... .... .....
T Consensus       164 -----------~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (272)
T d1g0oa_         164 -----------HAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQW  232 (272)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHS
T ss_pred             -----------hhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHcc
Confidence                       146888998888888877765   59999999999997653110        000011 1111 11122


Q ss_pred             CCCCCCCcccCcccHHHHHHHHHHhhcC--CCCCceEEecCCcc
Q 021819          217 SKDTQEYHWLGAVPVKDVAKAQVLLFES--PAASGRYLCTNGIY  258 (307)
Q Consensus       217 ~~~~~~~~~~~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~~  258 (307)
                      .|      ...+..++|+|.++.+++..  ....|..+..|++.
T Consensus       233 ~P------lgR~~~peevA~~v~fL~s~~s~~itG~~i~vDGG~  270 (272)
T d1g0oa_         233 SP------LRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA  270 (272)
T ss_dssp             CT------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CC------CCCCcCHHHHHHHHHHHhCchhcCccCceEeECCCC
Confidence            21      23578999999999998854  33467777666553

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.89  E-value=1.2e-22  Score=167.64  Aligned_cols=173  Identities=18%  Similarity=0.163  Sum_probs=129.0

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHH---CCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            9 EETVCVTGANGFIGTWLVKTLLD---NNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~---~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ||+||||||+++||+++++.|++   +|+ +|++..|+.++.+.+..+..... ++.++.+|++|+++++++++      
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dvs~~~~v~~~~~~i~~~~   79 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHS-NIHILEIDLRNFDAYDKLVADIEGVT   79 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCT-TEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHhcCC-cEEEEEEEeccHHHHHHHHhhhHHHh
Confidence            78999999999999999999974   688 89999998887766544322222 79999999999988876654      


Q ss_pred             ---CccEEEEeccCCCCCC-----CCChhhhhhhhhHHHHHHHHHHHHh----c-----------CCcEEEEecCcceec
Q 021819           80 ---GCKGVFHVASPCTLED-----PVDPEKELILPAVQGTLNVLEAAKR----F-----------GVRRVVVTSSISAIV  136 (307)
Q Consensus        80 ---~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~-----------~~~~~v~iSS~~~~~  136 (307)
                         ++|++|||||......     ..+++.+.+++|+.|+..+.+++..    .           +.+++|++||..+..
T Consensus        80 ~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~  159 (248)
T d1snya_          80 KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI  159 (248)
T ss_dssp             GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS
T ss_pred             hcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccccc
Confidence               4799999999755421     2234678999999999998887632    1           346899999976532


Q ss_pred             cCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCC
Q 021819          137 PNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQ  200 (307)
Q Consensus       137 ~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~  200 (307)
                      .....            +.     ...|+.||.+...+.+.++.+   .|++++++.||.|-++...
T Consensus       160 ~~~~~------------~~-----~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~  209 (248)
T d1snya_         160 QGNTD------------GG-----MYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGG  209 (248)
T ss_dssp             TTCCS------------CC-----CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTC
T ss_pred             CCCCC------------CC-----hHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCccc
Confidence            21110            10     135888888888887766644   4899999999999887643

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=3.3e-22  Score=165.03  Aligned_cols=213  Identities=18%  Similarity=0.133  Sum_probs=151.7

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      ++++|+++||||+++||++++++|+++|+ +|++.+|+.+..+.......   ........|+.+.+.+++...      
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLG---NNCVFAPADVTSEKDVQTALALAKGKF   77 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHC---TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhC---CCccccccccccccccccccccccccc
Confidence            46799999999999999999999999999 89999998776554433211   167788899998876655543      


Q ss_pred             -CccEEEEeccCCCCC----------CCCChhhhhhhhhHHHHHHHHHHHHhc----------CCcEEEEecCcceeccC
Q 021819           80 -GCKGVFHVASPCTLE----------DPVDPEKELILPAVQGTLNVLEAAKRF----------GVRRVVVTSSISAIVPN  138 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~~v~iSS~~~~~~~  138 (307)
                       ..|.++++++.....          ...+.+.+.+++|+.++.++.+++..+          +.++||++||..+..+.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~  157 (248)
T d2o23a1          78 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ  157 (248)
T ss_dssp             SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred             ccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCC
Confidence             568888887654321          122356789999999999999988432          34689999998876665


Q ss_pred             CCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHc
Q 021819          139 PGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQ  215 (307)
Q Consensus       139 ~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~  215 (307)
                      ++.                    ..|+.+|...+.+.+.++.+   +|+++++|.||.+.++......   .........
T Consensus       158 ~~~--------------------~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~---~~~~~~~~~  214 (248)
T d2o23a1         158 VGQ--------------------AAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLP---EKVCNFLAS  214 (248)
T ss_dssp             TTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------------CHHHH
T ss_pred             CCc--------------------hHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCC---HHHHHHHHh
Confidence            553                    56888888888888877766   4899999999999887644321   112222222


Q ss_pred             CCCCCCCCcccCcccHHHHHHHHHHhhcCCCCCce
Q 021819          216 GSKDTQEYHWLGAVPVKDVAKAQVLLFESPAASGR  250 (307)
Q Consensus       216 ~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~~~g~  250 (307)
                      ..+.     ...+..++|+|+++.++++++...|.
T Consensus       215 ~~pl-----~~R~g~peevA~~v~fL~s~~~itGq  244 (248)
T d2o23a1         215 QVPF-----PSRLGDPAEYAHLVQAIIENPFLNGE  244 (248)
T ss_dssp             TCSS-----SCSCBCHHHHHHHHHHHHHCTTCCSC
T ss_pred             cCCC-----CCCCcCHHHHHHHHHHHHhCCCCCce
Confidence            2211     13467999999999999886555554

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.89  E-value=4.7e-23  Score=178.84  Aligned_cols=229  Identities=16%  Similarity=0.094  Sum_probs=159.7

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChh-HHHHHhcCccEEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG-AVSRAVEGCKGVFH   86 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~-~~~~~~~~~d~vi~   86 (307)
                      +.|+|+|||||||||++|+++|+++|+ +|+++.|+...........   ..+++++++|+.|.. .+..++.++|.+++
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~---~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~   77 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKGLIAEELQA---IPNVTLFQGPLLNNVPLMDTLFEGAHLAFI   77 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCSHHHHHHHT---STTEEEEESCCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCC-eEEEEECCcchhhhhhhcc---cCCCEEEEeeCCCcHHHHHHHhcCCceEEe
Confidence            467999999999999999999999999 9999999765533211110   117999999999865 46778889999988


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHH
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPV  166 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~  166 (307)
                      +....            ...++..+.+++++|.+.|++++++.||..........                  ....|..
T Consensus        78 ~~~~~------------~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~~------------------~~~~~~~  127 (350)
T d1xgka_          78 NTTSQ------------AGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPW------------------PAVPMWA  127 (350)
T ss_dssp             CCCST------------TSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSC------------------CCCTTTH
T ss_pred             ecccc------------cchhhhhhhHHHHHHHHhCCCceEEEeeccccccCCcc------------------cchhhhh
Confidence            75331            13456778999999999998888888885543222111                  1145778


Q ss_pred             HHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCC----CCCCCCcccCcccH-HHHHHHHHHh
Q 021819          167 SKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGS----KDTQEYHWLGAVPV-KDVAKAQVLL  241 (307)
Q Consensus       167 sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~-~dva~~~~~~  241 (307)
                      +|...+++..    +.+++++++||+.+++.............  ....+.    ....++....++++ +|+++++..+
T Consensus       128 ~k~~~~~~~~----~~~~~~~~vr~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~  201 (350)
T d1xgka_         128 PKFTVENYVR----QLGLPSTFVYAGIYNNNFTSLPYPLFQME--LMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQI  201 (350)
T ss_dssp             HHHHHHHHHH----TSSSCEEEEEECEEGGGCBSSSCSSCBEE--ECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHH
T ss_pred             hHHHHHHHHH----hhccCceeeeeceeecccccccccccccc--ccccccceeeecccCCCcceEEEeHHHHHHHHHHH
Confidence            8888887765    67899999999988775433221110000  000111    01124466777875 7999999999


Q ss_pred             hcCCC--CCc-eEEecCCcccHHHHHHHHHHhCCCCCCC
Q 021819          242 FESPA--ASG-RYLCTNGIYQFGDFAERVSKLFPEFPVH  277 (307)
Q Consensus       242 ~~~~~--~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (307)
                      +..+.  ..| .|+++++.+|+.|+++.+.+++ |.++.
T Consensus       202 l~~~~~~~~G~~~~~~g~~~T~~eia~~l~~~~-G~~v~  239 (350)
T d1xgka_         202 FKDGPQKWNGHRIALTFETLSPVQVCAAFSRAL-NRRVT  239 (350)
T ss_dssp             HHHCHHHHTTCEEEECSEEECHHHHHHHHHHHH-TSCEE
T ss_pred             HhCChhhcCCeEEEEeCCcCCHHHHHHHHHHHH-CCcce
Confidence            86542  235 5788888899999999999999 55543

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=1.7e-22  Score=167.75  Aligned_cols=217  Identities=17%  Similarity=0.096  Sum_probs=152.8

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHH---CCCCeEEEEeCCCCCCcccccC-CC-CCCCceEEEEcccCChhHHHHHhc--
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLD---NNYTSINATVFPGSDSSHLFAL-PG-AGDANLRVFEADVLDSGAVSRAVE--   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~---~g~~~V~~~~r~~~~~~~~~~~-~~-~~~~~~~~i~~D~~d~~~~~~~~~--   79 (307)
                      +++|+++||||+++||++++++|.+   +|+ +|++.+|+.+..+.+... .. ....++..+++|++|+++++++++  
T Consensus         4 L~gKvalITGas~GIG~aiA~~lA~~~~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           4 LGCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHhcccCCC-EEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            5689999999999999999999985   789 999999987665444321 11 011268899999999998887763  


Q ss_pred             ---------CccEEEEeccCCCC-------CCCCChhhhhhhhhHHHHHHHHHHHHhc----C--CcEEEEecCcceecc
Q 021819           80 ---------GCKGVFHVASPCTL-------EDPVDPEKELILPAVQGTLNVLEAAKRF----G--VRRVVVTSSISAIVP  137 (307)
Q Consensus        80 ---------~~d~vi~~a~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~--~~~~v~iSS~~~~~~  137 (307)
                               ..|++|||||....       ....+++.+.+++|+.++.++.+++.++    +  .+++|++||..+..+
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~  162 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP  162 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC
Confidence                     35799999986532       1222457889999999999999998543    2  358999999887665


Q ss_pred             CCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh-cCCcEEEEecCceeCCCCCCC--CcchHHHHHHHH
Q 021819          138 NPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-HGVDVVAIHPATCLGPLMQPY--LNASCAVLQQLL  214 (307)
Q Consensus       138 ~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-~~i~~~ivrp~~v~g~~~~~~--~~~~~~~~~~~~  214 (307)
                      .+..                    ..|+.+|...+.+.+.++.+ .|+++++|.||.|.++.....  ..........+.
T Consensus       163 ~~~~--------------------~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~  222 (259)
T d1oaaa_         163 YKGW--------------------GLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQ  222 (259)
T ss_dssp             CTTC--------------------HHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHH
T ss_pred             Cccc--------------------hHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHH
Confidence            5443                    57999999999988887765 589999999999987642110  000011111111


Q ss_pred             cCCCCCCCCcccCcccHHHHHHHHHHhhcCCC-CCce
Q 021819          215 QGSKDTQEYHWLGAVPVKDVAKAQVLLFESPA-ASGR  250 (307)
Q Consensus       215 ~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~-~~g~  250 (307)
                      ...      ....+..++|+|+++++++.... ..|.
T Consensus       223 ~~~------~~~r~~~p~evA~~i~~ll~~~s~~TG~  253 (259)
T d1oaaa_         223 KLK------SDGALVDCGTSAQKLLGLLQKDTFQSGA  253 (259)
T ss_dssp             HHH------HTTCSBCHHHHHHHHHHHHHHCCSCTTE
T ss_pred             hcC------CCCCCCCHHHHHHHHHHHhhhccCCCCC
Confidence            100      11235789999999999886432 3354

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.88  E-value=3.3e-22  Score=166.12  Aligned_cols=207  Identities=19%  Similarity=0.191  Sum_probs=152.3

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc----cCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF----ALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      ..+|+||||+|+||++++++|+++|+.+|+.+.|+....+...    ++...+. ++.++.+|++|+++++++++     
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~-~v~~~~~Dv~d~~~~~~~~~~i~~~   87 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGA-RTTVAACDVTDRESVRELLGGIGDD   87 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccc-cccccccccchHHHHHHhhcccccc
Confidence            5699999999999999999999999856888888644333222    1111122 78999999999999998876     


Q ss_pred             -CccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCcceeccCCCCCCcccccCCCCch
Q 021819           80 -GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDL  154 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~  154 (307)
                       .+|.|||++|......    ..+.+...++.|+.++.++.+++...+.++||++||+.+..+.++.             
T Consensus        88 ~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~~-------------  154 (259)
T d2fr1a1          88 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGL-------------  154 (259)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTC-------------
T ss_pred             ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCccc-------------
Confidence             3699999999776522    2234577899999999999999988888899999999887776664             


Q ss_pred             hhhcccCccHHHHHHHHHHHHHHHHHhcCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHH
Q 021819          155 EYCKSRKKWYPVSKTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDV  234 (307)
Q Consensus       155 ~~~~~~~~~y~~sK~~~e~~~~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dv  234 (307)
                             ..|+.+|...+.+.+.+.. .|+++++|.||.+.+++....     . ......       ......++++++
T Consensus       155 -------~~YaAaka~l~~la~~~~~-~Gi~v~~I~pg~~~~~g~~~~-----~-~~~~~~-------~~G~~~~~~~~~  213 (259)
T d2fr1a1         155 -------GGYAPGNAYLDGLAQQRRS-DGLPATAVAWGTWAGSGMAEG-----P-VADRFR-------RHGVIEMPPETA  213 (259)
T ss_dssp             -------TTTHHHHHHHHHHHHHHHH-TTCCCEEEEECCBC------------------CT-------TTTEECBCHHHH
T ss_pred             -------HHHHHHHHhHHHHHHHHHh-CCCCEEECCCCcccCCccccc-----h-HHHHHH-------hcCCCCCCHHHH
Confidence                   5699999999988876654 599999999998876643211     0 111111       112345789999


Q ss_pred             HHHHHHhhcCCCCCce
Q 021819          235 AKAQVLLFESPAASGR  250 (307)
Q Consensus       235 a~~~~~~~~~~~~~g~  250 (307)
                      ++++..++..+.....
T Consensus       214 ~~~l~~~l~~~~~~~~  229 (259)
T d2fr1a1         214 CRALQNALDRAEVCPI  229 (259)
T ss_dssp             HHHHHHHHHTTCSSCE
T ss_pred             HHHHHHHHhCCCceEE
Confidence            9999999988765443

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=4.3e-22  Score=165.36  Aligned_cols=225  Identities=14%  Similarity=0.101  Sum_probs=159.1

Q ss_pred             cCCcEEEEeCCch--hhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            7 KEEETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         7 ~~~~~ilItGatG--~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      +++|++|||||+|  +||+++++.|+++|+ +|++.+|++...+.+.++..... ....+..|+++..+..+.+.     
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   80 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLG-SDIVLQCDVAEDASIDTMFAELGKV   80 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHhhcC-CcceeecccchHHHHHHHHHHhhhc
Confidence            5789999999998  899999999999999 89999997655443333222122 56678889999877766654     


Q ss_pred             --CccEEEEeccCCCCCCC---------CChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCccc
Q 021819           80 --GCKGVFHVASPCTLEDP---------VDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVF  146 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~~~---------~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~  146 (307)
                        ..|++||+++.......         .+.+...+.+|+.+...+.+++...  +.+.+|++||..+..+.+..     
T Consensus        81 ~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~~-----  155 (258)
T d1qsga_          81 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNY-----  155 (258)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTT-----
T ss_pred             ccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCCc-----
Confidence              46999999987643211         1123566778888888888888654  23569999987765554432     


Q ss_pred             ccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCC
Q 021819          147 DETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEY  223 (307)
Q Consensus       147 ~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (307)
                                     ..|+.+|...+.+.+.++.+   +||++++|+||.|.++...... .............|     
T Consensus       156 ---------------~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~-~~~~~~~~~~~~~p-----  214 (258)
T d1qsga_         156 ---------------NVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK-DFRKMLAHCEAVTP-----  214 (258)
T ss_dssp             ---------------THHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGST-THHHHHHHHHHHST-----
T ss_pred             ---------------HHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccc-hhhhHHHHHHhCCC-----
Confidence                           56888888888888777766   4799999999999988755432 22233333333222     


Q ss_pred             cccCcccHHHHHHHHHHhhcC--CCCCceEEecCCcccH
Q 021819          224 HWLGAVPVKDVAKAQVLLFES--PAASGRYLCTNGIYQF  260 (307)
Q Consensus       224 ~~~~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~~~~  260 (307)
                       ...+..++|+|.++.+++..  ....|..+..|+++++
T Consensus       215 -l~R~~~peeia~~v~fL~s~~s~~itG~~i~vDGG~~i  252 (258)
T d1qsga_         215 -IRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSI  252 (258)
T ss_dssp             -TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             -CCCCcCHHHHHHHHHHHhCchhcCccCceEEECcCHHH
Confidence             23477999999999998853  3456877777777654

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.88  E-value=2.3e-21  Score=160.08  Aligned_cols=211  Identities=19%  Similarity=0.123  Sum_probs=142.3

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCC-eEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--------
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYT-SINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--------   79 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--------   79 (307)
                      .|+||||||+++||++++++|+++|+. .|++..|+.++.+.+++...   .++.++++|++|.++++++++        
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~---~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   79 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKD---SRVHVLPLTVTCDKSLDTFVSKVGEIVGS   79 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCC---TTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhC---CceEEEEEecCCHHHHHHHHHHHHHHhCC
Confidence            479999999999999999999999962 68888888776666554432   279999999999988877654        


Q ss_pred             -CccEEEEeccCCCC-----CCCCChhhhhhhhhHHHHHHHHHHHHh----c-----------CCcEEEEecCcceeccC
Q 021819           80 -GCKGVFHVASPCTL-----EDPVDPEKELILPAVQGTLNVLEAAKR----F-----------GVRRVVVTSSISAIVPN  138 (307)
Q Consensus        80 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~-----------~~~~~v~iSS~~~~~~~  138 (307)
                       ++|++|||||....     ....+++++.+++|+.|+.++.+++..    .           ...+++.+|+.......
T Consensus        80 ~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~  159 (250)
T d1yo6a1          80 DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD  159 (250)
T ss_dssp             GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred             CCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccC
Confidence             37999999997543     112234678999999999999887632    1           12578888875443222


Q ss_pred             CCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHc
Q 021819          139 PGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQ  215 (307)
Q Consensus       139 ~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~  215 (307)
                      ...      . .+      ..+...|+.||.+...+.+.++.+   .|++++++.||.|-++....              
T Consensus       160 ~~~------~-~~------~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~--------------  212 (250)
T d1yo6a1         160 NTS------G-SA------QFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK--------------  212 (250)
T ss_dssp             CCS------T-TS------SSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---------------------
T ss_pred             Ccc------c-cc------chhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCC--------------
Confidence            111      0 00      001134999999998888877765   48999999999997764221              


Q ss_pred             CCCCCCCCcccCcccHHHHHHHHHHhhcCCC--CCceEEec-CCccc
Q 021819          216 GSKDTQEYHWLGAVPVKDVAKAQVLLFESPA--ASGRYLCT-NGIYQ  259 (307)
Q Consensus       216 ~~~~~~~~~~~~~i~~~dva~~~~~~~~~~~--~~g~~~~~-~~~~~  259 (307)
                                ...+++++.++.++..+....  ..|.|... ++++.
T Consensus       213 ----------~~~~~~e~~a~~~~~~~~~~~~~~sG~f~~~~g~p~~  249 (250)
T d1yo6a1         213 ----------NAALTVEQSTAELISSFNKLDNSHNGRFFMRNLKPYE  249 (250)
T ss_dssp             ----------------HHHHHHHHHHHTTCCGGGTTCEEETTEEECC
T ss_pred             ----------CCCCCHHHHHHHHHHHHhcCCCCCCeEEECCCCeeCC
Confidence                      112578999999988887644  34665433 34443

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.9e-22  Score=168.93  Aligned_cols=217  Identities=18%  Similarity=0.100  Sum_probs=145.0

Q ss_pred             EEEEeCCchhhHHHHHHHHHHC-CCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhc-------Cc
Q 021819           11 TVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE-------GC   81 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~-------~~   81 (307)
                      .++||||+++||+++++.|+++ |+ +|++.+|+.++.+.+.. +..... ++.++++|++|.++++++++       ++
T Consensus         5 VAlVTGas~GIG~a~A~~la~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dvs~~~sv~~~~~~~~~~~g~i   82 (275)
T d1wmaa1           5 VALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEYGGL   82 (275)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             EEEECCCCCHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCC-cEEEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence            4599999999999999999986 78 89999998766544332 222222 78899999999999887765       57


Q ss_pred             cEEEEeccCCCCCCCC----ChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCC--------cccc
Q 021819           82 KGVFHVASPCTLEDPV----DPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKG--------KVFD  147 (307)
Q Consensus        82 d~vi~~a~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~--------~~~~  147 (307)
                      |++|||||........    ++++..+++|+.|+.++.+++...  .-+++|++||+.+..+.+....        ....
T Consensus        83 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~  162 (275)
T d1wmaa1          83 DVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETIT  162 (275)
T ss_dssp             EEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCC
T ss_pred             EEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcccccc
Confidence            9999999987543222    245678999999999999998653  2358999999766443222100        0000


Q ss_pred             cCC------------CC-chhhhcccCccHHHHHHHHHHHHHHHHHh-------cCCcEEEEecCceeCCCCCCCCcchH
Q 021819          148 ETS------------WT-DLEYCKSRKKWYPVSKTLAEKAAWEFAEK-------HGVDVVAIHPATCLGPLMQPYLNASC  207 (307)
Q Consensus       148 E~~------------~~-~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-------~~i~~~ivrp~~v~g~~~~~~~~~~~  207 (307)
                      +..            .. ...........|+.||.....+.+.++++       .+++++++.||.|.++.....     
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~-----  237 (275)
T d1wmaa1         163 EEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK-----  237 (275)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTT-----
T ss_pred             hhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCc-----
Confidence            000            00 00000011235999998887766554433       389999999999987753321     


Q ss_pred             HHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCC-C---CCceEEe
Q 021819          208 AVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP-A---ASGRYLC  253 (307)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~-~---~~g~~~~  253 (307)
                                         ...+++|.|+.+++++..+ +   ..|.|.-
T Consensus       238 -------------------~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~  268 (275)
T d1wmaa1         238 -------------------ATKSPEEGAETPVYLALLPPDAEGPHGQFVS  268 (275)
T ss_dssp             -------------------CSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             -------------------ccCCHHHHHHHHHHHHcCChhhcCCCeEEEE
Confidence                               1247899999988876432 2   2366664

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.87  E-value=4.6e-22  Score=162.78  Aligned_cols=190  Identities=13%  Similarity=0.125  Sum_probs=136.9

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHh-------c-
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV-------E-   79 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~-------~-   79 (307)
                      ++|+||||||+|+||+++++.|+++|+ +|++++++......          ....+..|..+.++...+.       . 
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~-~V~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEAS----------ASVIVKMTDSFTEQADQVTAEVGKLLGD   69 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTSS----------EEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCcccccc----------ccceeecccCcHHHHHHHHHHHHHHhCC
Confidence            378999999999999999999999999 89988886544321          2234445554443333222       2 


Q ss_pred             -CccEEEEeccCCCCC-----CCCChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 -GCKGVFHVASPCTLE-----DPVDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                       ++|++|||||.....     ...+.+++.+++|+.++.++.+++.++  +.+++|++||.++..+.+..          
T Consensus        70 ~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~----------  139 (236)
T d1dhra_          70 QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGM----------  139 (236)
T ss_dssp             CCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTB----------
T ss_pred             CCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccCC----------
Confidence             489999999964321     112345778999999999999988654  23689999998776554442          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHh-----cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                                ..|+.+|...+.+.+.++.+     .|+++++|.||.|.++..           +.....      ....
T Consensus       140 ----------~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~-----------~~~~~~------~~~~  192 (236)
T d1dhra_         140 ----------IGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMN-----------RKSMPE------ADFS  192 (236)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHH-----------HHHSTT------SCGG
T ss_pred             ----------cccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcc-----------hhhCcc------chhh
Confidence                      57999999999999988755     379999999999987531           111111      1234


Q ss_pred             CcccHHHHHHHHHHhhcCC
Q 021819          227 GAVPVKDVAKAQVLLFESP  245 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~  245 (307)
                      .|++++|+|+.+.+++...
T Consensus       193 ~~~~pe~va~~~~~l~s~~  211 (236)
T d1dhra_         193 SWTPLEFLVETFHDWITGN  211 (236)
T ss_dssp             GSEEHHHHHHHHHHHHTTT
T ss_pred             cCCCHHHHHHHHHHHhCCC
Confidence            5788999999999888653

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.87  E-value=6.6e-21  Score=156.47  Aligned_cols=209  Identities=22%  Similarity=0.182  Sum_probs=149.7

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc------CccE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE------GCKG   83 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~------~~d~   83 (307)
                      |++|||||+++||+++++.|+++|+ +|++.+|+++..            +...+++|+++.....++..      ..+.
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~   68 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGY-RVVVLDLRREGE------------DLIYVEGDVTREEDVRRAVARAQEEAPLFA   68 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCCSS------------SSEEEECCTTCHHHHHHHHHHHHHHSCEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcccc------------cceEeeccccchhhhHHHHHhhhccccccc
Confidence            7999999999999999999999999 899999876432            45677899998876665543      3456


Q ss_pred             EEEeccCCCCC--------CCCChhhhhhhhhHHHHHHHHHHHHh----------cCCcEEEEecCcceeccCCCCCCcc
Q 021819           84 VFHVASPCTLE--------DPVDPEKELILPAVQGTLNVLEAAKR----------FGVRRVVVTSSISAIVPNPGWKGKV  145 (307)
Q Consensus        84 vi~~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~----------~~~~~~v~iSS~~~~~~~~~~~~~~  145 (307)
                      ++++++.....        ...+.+.+.+++|+.+...+.+.+..          .+.+++|++||..+..+.++.    
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~----  144 (241)
T d1uaya_          69 VVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQ----  144 (241)
T ss_dssp             EEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTC----
T ss_pred             hhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCc----
Confidence            66666543321        11224567889999988888877632          234689999998877666553    


Q ss_pred             cccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCC
Q 021819          146 FDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQE  222 (307)
Q Consensus       146 ~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (307)
                                      ..|+.+|...+.+.+.++.+   +||++++|.||.|.++......   ...........+.   
T Consensus       145 ----------------~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~---~~~~~~~~~~~~~---  202 (241)
T d1uaya_         145 ----------------AAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP---EKAKASLAAQVPF---  202 (241)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC---HHHHHHHHTTCCS---
T ss_pred             ----------------hhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhh---hhHHHHHHhcCCC---
Confidence                            46888888888777777655   5899999999999876543321   2223333333221   


Q ss_pred             CcccCcccHHHHHHHHHHhhcCCCCCceEEecCCccc
Q 021819          223 YHWLGAVPVKDVAKAQVLLFESPAASGRYLCTNGIYQ  259 (307)
Q Consensus       223 ~~~~~~i~~~dva~~~~~~~~~~~~~g~~~~~~~~~~  259 (307)
                        ...+..++|+|.++.+++.+....|..+..|++++
T Consensus       203 --~~R~g~pedvA~~v~fL~s~~~iTG~~i~VDGG~~  237 (241)
T d1uaya_         203 --PPRLGRPEEYAALVLHILENPMLNGEVVRLDGALR  237 (241)
T ss_dssp             --SCSCCCHHHHHHHHHHHHHCTTCCSCEEEESTTCC
T ss_pred             --CCCCcCHHHHHHHHHHHHhCCCCCCCEEEECCccc
Confidence              13467899999999999987667788776666654

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.86  E-value=1.1e-21  Score=160.49  Aligned_cols=194  Identities=17%  Similarity=0.209  Sum_probs=137.6

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHh---------c
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV---------E   79 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~---------~   79 (307)
                      ..||+||||+++||++++++|+++|+ +|++++|++.....          ....+.+|+.+.+......         .
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~-~V~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   70 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQAD----------SNILVDGNKNWTEQEQSILEQTASSLQGS   70 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTSS----------EEEECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCchhccc----------ccceeccccCchhHHHHHHHHHHHHhcCC
Confidence            35899999999999999999999999 89999997654321          2334456665543332221         2


Q ss_pred             CccEEEEeccCCCCC-CC----CChhhhhhhhhHHHHHHHHHHHHhc--CCcEEEEecCcceeccCCCCCCcccccCCCC
Q 021819           80 GCKGVFHVASPCTLE-DP----VDPEKELILPAVQGTLNVLEAAKRF--GVRRVVVTSSISAIVPNPGWKGKVFDETSWT  152 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~-~~----~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~  152 (307)
                      ++|++|||||..... ..    .+.++..+++|+.++.++.+++..+  +.+++|++||..+..+.++.           
T Consensus        71 ~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~~-----------  139 (235)
T d1ooea_          71 QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSM-----------  139 (235)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTB-----------
T ss_pred             CeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcccc-----------
Confidence            579999999964431 11    2235678999999999999988654  23689999998876665543           


Q ss_pred             chhhhcccCccHHHHHHHHHHHHHHHHHh-----cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccC
Q 021819          153 DLEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLG  227 (307)
Q Consensus       153 ~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (307)
                               ..|+.+|.+.+.+.+.++.+     .+++++.+.||.+.++.           .+......      ....
T Consensus       140 ---------~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~-----------~~~~~~~~------~~~~  193 (235)
T d1ooea_         140 ---------IGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM-----------NRKWMPNA------DHSS  193 (235)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH-----------HHHHSTTC------CGGG
T ss_pred             ---------cchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcc-----------hhhhCcCC------cccc
Confidence                     57999999999999988765     37799999999886542           12221111      2345


Q ss_pred             cccHHHHHHHHHHhhcCCC---CCce
Q 021819          228 AVPVKDVAKAQVLLFESPA---ASGR  250 (307)
Q Consensus       228 ~i~~~dva~~~~~~~~~~~---~~g~  250 (307)
                      +++++|+++.++..+.++.   ..|.
T Consensus       194 ~~~~~~va~~~~~~l~~~~~~~~tG~  219 (235)
T d1ooea_         194 WTPLSFISEHLLKWTTETSSRPSSGA  219 (235)
T ss_dssp             CBCHHHHHHHHHHHHHCGGGCCCTTC
T ss_pred             CCCHHHHHHHHHHHhcCccccCCCce
Confidence            7899999999887665533   3464

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.1e-21  Score=163.61  Aligned_cols=202  Identities=15%  Similarity=0.052  Sum_probs=146.8

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccC-CCCCCCceEEEEcccCChhHHHHHhc------
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL-PGAGDANLRVFEADVLDSGAVSRAVE------   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~i~~D~~d~~~~~~~~~------   79 (307)
                      +++|+++|||||++||+++++.|+++|+ +|++.+|+.+..+.+... .......+..+.+|+.+.++....++      
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~-~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence            6789999999999999999999999999 999999987655443221 11111267788899998877766554      


Q ss_pred             -CccEEEEeccCCCCCC----CCChhhhhhhhhHHHHHHHHHHHHhc---CCcEEEEecCcceeccCCCCCCcccccCCC
Q 021819           80 -GCKGVFHVASPCTLED----PVDPEKELILPAVQGTLNVLEAAKRF---GVRRVVVTSSISAIVPNPGWKGKVFDETSW  151 (307)
Q Consensus        80 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~  151 (307)
                       .+|+++|+|+......    ..+++...+++|+.++..+.+.+...   +-+++|++||.++..+.+..          
T Consensus        91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p~~----------  160 (269)
T d1xu9a_          91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMV----------  160 (269)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTC----------
T ss_pred             CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCCCc----------
Confidence             5799999998765422    23345788999999998888877432   23689999998876665553          


Q ss_pred             CchhhhcccCccHHHHHHHHHHHHHHHHHh-----cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCccc
Q 021819          152 TDLEYCKSRKKWYPVSKTLAEKAAWEFAEK-----HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWL  226 (307)
Q Consensus       152 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (307)
                                ..|+.||...+.+.+.++.+     .+++++.+.||.|.++.           ..+...+.      ...
T Consensus       161 ----------~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~-----------~~~~~~~~------~~~  213 (269)
T d1xu9a_         161 ----------AAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET-----------AMKAVSGI------VHM  213 (269)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH-----------HHHHSCGG------GGG
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcH-----------HHHhccCC------ccc
Confidence                      56888888888887777654     36999999999996642           11111111      123


Q ss_pred             CcccHHHHHHHHHHhhcCCC
Q 021819          227 GAVPVKDVAKAQVLLFESPA  246 (307)
Q Consensus       227 ~~i~~~dva~~~~~~~~~~~  246 (307)
                      ...+++++|+.++..+....
T Consensus       214 ~~~~~e~~a~~i~~~~~~~~  233 (269)
T d1xu9a_         214 QAAPKEECALEIIKGGALRQ  233 (269)
T ss_dssp             GCBCHHHHHHHHHHHHHTTC
T ss_pred             cCCCHHHHHHHHHHHhhcCC
Confidence            45678999999988776544

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.84  E-value=7.3e-20  Score=153.86  Aligned_cols=221  Identities=15%  Similarity=0.103  Sum_probs=144.1

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC-Cccccc-C---CCC--------------CCCceEEEEcccC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD-SSHLFA-L---PGA--------------GDANLRVFEADVL   69 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~-~---~~~--------------~~~~~~~i~~D~~   69 (307)
                      |+.++||||+++||+++++.|+++|+ +|++.+++... .+.+.. +   ...              ....+....+|++
T Consensus         2 ~pVAlITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~   80 (284)
T d1e7wa_           2 VPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVT   80 (284)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCC
Confidence            56999999999999999999999999 88777665322 221111 0   000              0012334556788


Q ss_pred             ChhHHHHHhc-------CccEEEEeccCCCCCCCCC----h--------------hhhhhhhhHHHHHHHHHHHHh----
Q 021819           70 DSGAVSRAVE-------GCKGVFHVASPCTLEDPVD----P--------------EKELILPAVQGTLNVLEAAKR----  120 (307)
Q Consensus        70 d~~~~~~~~~-------~~d~vi~~a~~~~~~~~~~----~--------------~~~~~~~n~~~~~~l~~~~~~----  120 (307)
                      ++++++++++       ++|++|||||........+    .              +...+.+|+.++..+.+++.+    
T Consensus        81 ~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~  160 (284)
T d1e7wa_          81 LFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG  160 (284)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhh
Confidence            8888887764       6899999999765422111    1              123678899999998887632    


Q ss_pred             ------cCCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEec
Q 021819          121 ------FGVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHP  191 (307)
Q Consensus       121 ------~~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp  191 (307)
                            .+...+|+++|.....+.++.                    ..|+.+|...+.+.+.++.+   +||++++|.|
T Consensus       161 ~~~~~~~~~~~ii~~~s~~~~~~~~~~--------------------~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~P  220 (284)
T d1e7wa_         161 TPAKHRGTNYSIINMVDAMTNQPLLGY--------------------TIYTMAKGALEGLTRSAALELAPLQIRVNGVGP  220 (284)
T ss_dssp             SCGGGSCSCEEEEEECCTTTTSCCTTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             hHHHhcCCCCcccccccccccCCccce--------------------eeeccccccchhhhHHHHHHhCCcccccccccc
Confidence                  134578888886654444332                    45888888888777776655   4899999999


Q ss_pred             CceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcC--CCCCceEEecCCcccH
Q 021819          192 ATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFES--PAASGRYLCTNGIYQF  260 (307)
Q Consensus       192 ~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~~~~  260 (307)
                      |.+-...     .......+......+.     ...+..++|+|+++++++..  ....|..+..|+++++
T Consensus       221 G~t~~~~-----~~~~~~~~~~~~~~pl-----~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl  281 (284)
T d1e7wa_         221 GLSVLVD-----DMPPAVWEGHRSKVPL-----YQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  281 (284)
T ss_dssp             SSBCCGG-----GSCHHHHHHHHTTCTT-----TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ccccccc-----cCCHHHHHHHHhcCCC-----CCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhc
Confidence            9643221     1223444454444331     23467899999999998853  3356877777777653

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.84  E-value=8.2e-20  Score=152.77  Aligned_cols=224  Identities=13%  Similarity=0.097  Sum_probs=143.7

Q ss_pred             cCCcEEEEeCCch--hhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-----
Q 021819            7 KEEETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----   79 (307)
Q Consensus         7 ~~~~~ilItGatG--~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----   79 (307)
                      +++|++|||||+|  +||+++++.|+++|+ +|++.+|+.+..+..+++..... ...++.+|+++++++.++++     
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga-~V~i~~r~~~~~~~~~~l~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~   80 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELN-SPYVYELDVSKEEHFKSLYNSVKKD   80 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhCC-ceeEeeecccchhhHHHHHHHHHHH
Confidence            5789999999887  899999999999999 99999997554444433322222 56778999999988777764     


Q ss_pred             --CccEEEEeccCCCCCCCC-----Chh---hhhhhhhHHHHHHHHHHHHhc-CC-cEEEEecCcceeccCCCCCCcccc
Q 021819           80 --GCKGVFHVASPCTLEDPV-----DPE---KELILPAVQGTLNVLEAAKRF-GV-RRVVVTSSISAIVPNPGWKGKVFD  147 (307)
Q Consensus        80 --~~d~vi~~a~~~~~~~~~-----~~~---~~~~~~n~~~~~~l~~~~~~~-~~-~~~v~iSS~~~~~~~~~~~~~~~~  147 (307)
                        .+|++||+++........     ..+   .....++..+...+.....+. +. ..++.+|+.+........      
T Consensus        81 ~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~~------  154 (274)
T d2pd4a1          81 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHY------  154 (274)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTC------
T ss_pred             cCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccccccc------
Confidence              679999999976542111     111   222222233444444444333 22 345555554433322221      


Q ss_pred             cCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCc
Q 021819          148 ETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYH  224 (307)
Q Consensus       148 E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (307)
                                    ..|+.+|...+.+.+.++.+   .|+++++|.||.+.++........ ...........      .
T Consensus       155 --------------~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~-~~~~~~~~~~~------p  213 (274)
T d2pd4a1         155 --------------NVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADF-RMILKWNEINA------P  213 (274)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTH-HHHHHHHHHHS------T
T ss_pred             --------------hhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCch-HHHHHHHhhhh------h
Confidence                          45888888888777766554   589999999999988765443221 12222222212      1


Q ss_pred             ccCcccHHHHHHHHHHhhcCC--CCCceEEecCCccc
Q 021819          225 WLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIYQ  259 (307)
Q Consensus       225 ~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~~  259 (307)
                      ...+..++|+|.++.+++...  ...|..+..|++++
T Consensus       214 ~~r~~~pedIA~~v~fL~S~~s~~itG~~i~vDGG~~  250 (274)
T d2pd4a1         214 LRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYH  250 (274)
T ss_dssp             TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ccCCcCHHHHHHHHHHHhChhhCCCcCceEEECCChh
Confidence            345689999999999988643  35677777777765

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.80  E-value=3e-18  Score=142.49  Aligned_cols=220  Identities=17%  Similarity=0.160  Sum_probs=142.2

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC-cccc-cCCCCCCCceEEEEcccCCh----hHHHHHh-----
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLF-ALPGAGDANLRVFEADVLDS----GAVSRAV-----   78 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~i~~D~~d~----~~~~~~~-----   78 (307)
                      +++|||||+++||+++++.|+++|+ +|+..+|+.++. +.+. ++..........++.|+.+.    +.+.+++     
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFR   80 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHH
Confidence            4789999999999999999999999 999999875542 2211 11111111566677666543    3333333     


Q ss_pred             --cCccEEEEeccCCCCCCCCC---------------hhhhhhhhhHHHHHHHHHHHHhc---------CCcEEEEecCc
Q 021819           79 --EGCKGVFHVASPCTLEDPVD---------------PEKELILPAVQGTLNVLEAAKRF---------GVRRVVVTSSI  132 (307)
Q Consensus        79 --~~~d~vi~~a~~~~~~~~~~---------------~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~iSS~  132 (307)
                        ..+|++|||||.........               .+...+..|..+...........         ....++.+|+.
T Consensus        81 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (266)
T d1mxha_          81 AFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDA  160 (266)
T ss_dssp             HHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCG
T ss_pred             HhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhc
Confidence              26899999999765422111               12344555666666555555332         23467777775


Q ss_pred             ceeccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHH
Q 021819          133 SAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAV  209 (307)
Q Consensus       133 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~  209 (307)
                      ......++.                    ..|+.+|...+.+.+.++.+   .|++++.|.||.+.++....     ...
T Consensus       161 ~~~~~~~~~--------------------~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~-----~~~  215 (266)
T d1mxha_         161 MTDLPLPGF--------------------CVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP-----QET  215 (266)
T ss_dssp             GGGSCCTTC--------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC-----HHH
T ss_pred             cccccCcch--------------------hhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC-----HHH
Confidence            554333332                    56999999999888877765   48999999999987764322     233


Q ss_pred             HHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhcCC--CCCceEEecCCcccH
Q 021819          210 LQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFESP--AASGRYLCTNGIYQF  260 (307)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~~--~~~g~~~~~~~~~~~  260 (307)
                      ...+....+.     .+.+.+++|+|+++++++...  ...|..+..|+++++
T Consensus       216 ~~~~~~~~pl-----~r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~l  263 (266)
T d1mxha_         216 QEEYRRKVPL-----GQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL  263 (266)
T ss_dssp             HHHHHTTCTT-----TSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHhcCCC-----CCCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHhh
Confidence            4444443321     133578999999999999643  456877777776653

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.79  E-value=7.7e-18  Score=142.25  Aligned_cols=226  Identities=12%  Similarity=0.073  Sum_probs=141.9

Q ss_pred             ccCCcEEEEeCCch--hhHHHHHHHHHHCCCCeEEEEeCCCCC-------------CcccccCCCCCCCceEEEEcc--c
Q 021819            6 EKEEETVCVTGANG--FIGTWLVKTLLDNNYTSINATVFPGSD-------------SSHLFALPGAGDANLRVFEAD--V   68 (307)
Q Consensus         6 ~~~~~~ilItGatG--~iG~~l~~~L~~~g~~~V~~~~r~~~~-------------~~~~~~~~~~~~~~~~~i~~D--~   68 (307)
                      ++++|++|||||+|  +||+++++.|+++|+ +|++.+|++..             ............ .-....+|  +
T Consensus         5 ~L~gK~alVTGass~~GIG~aiA~~la~~Ga-~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~   82 (297)
T d1d7oa_           5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGA-EILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLME-IKKVYPLDAVF   82 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCC-EEEEEEECTTC
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhh-hhhhhhhhhhc
Confidence            57899999999987  999999999999999 88888774211             011100000000 01122222  1


Q ss_pred             ------------------CChhHHHHH-------hcCccEEEEeccCCCC------CCCCChhhhhhhhhHHHHHHHHHH
Q 021819           69 ------------------LDSGAVSRA-------VEGCKGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEA  117 (307)
Q Consensus        69 ------------------~d~~~~~~~-------~~~~d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~  117 (307)
                                        .+..+.+++       +.++|++|||||....      +...+++...+++|+.+..++.++
T Consensus        83 ~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~  162 (297)
T d1d7oa_          83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH  162 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhH
Confidence                              122222222       2378999999987432      223345788999999999999999


Q ss_pred             HHhcC--CcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHH----HhcCCcEEEEec
Q 021819          118 AKRFG--VRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFA----EKHGVDVVAIHP  191 (307)
Q Consensus       118 ~~~~~--~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~----~~~~i~~~ivrp  191 (307)
                      +....  -+..+.+++.+........                   ...|..+|...+.+.+.++    .++|+++++|.|
T Consensus       163 ~~~~~~~~g~~~~~~~~~~~~~~~~~-------------------~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~P  223 (297)
T d1d7oa_         163 FLPIMNPGGASISLTYIASERIIPGY-------------------GGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISA  223 (297)
T ss_dssp             HGGGEEEEEEEEEEECGGGTSCCTTC-------------------TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             HHHHhhcCCcceeeeehhhccccccc-------------------ccceecccccccccccccchhccccceEEeccccc
Confidence            86552  2345666654432221111                   1468888877776665443    346899999999


Q ss_pred             CceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcccCcccHHHHHHHHHHhhc--CCCCCceEEecCCccc
Q 021819          192 ATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFE--SPAASGRYLCTNGIYQ  259 (307)
Q Consensus       192 ~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~--~~~~~g~~~~~~~~~~  259 (307)
                      |.+.++..... .....+.+......|      ...+..++|+|.++++++.  .....|..+..|++++
T Consensus       224 G~i~T~~~~~~-~~~~~~~~~~~~~~P------lgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s  286 (297)
T d1d7oa_         224 GPLGSRAAKAI-GFIDTMIEYSYNNAP------IQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLN  286 (297)
T ss_dssp             CCCBCCCSSCC-SHHHHHHHHHHHHSS------SCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             ccccchhhhhc-cCCHHHHHHHHhCCC------CCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHh
Confidence            99998876543 222334444443332      2346799999999988884  3445687777777665

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.79  E-value=1.7e-18  Score=144.21  Aligned_cols=223  Identities=15%  Similarity=0.113  Sum_probs=142.5

Q ss_pred             cCCcEEEEeCCc--hhhHHHHHHHHHHCCCCeEEEEeCCCCCC-cccccCCCCCCCceEEEEcccCChhHHHHHhc----
Q 021819            7 KEEETVCVTGAN--GFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVE----   79 (307)
Q Consensus         7 ~~~~~ilItGat--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~----   79 (307)
                      +++|+++||||+  .+||+++++.|+++|+ +|+...|+..+. +.+.+..   ..+...+++|+++++++.++++    
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga-~Vil~~~~~~~~~~~~~~~~---~~~~~~~~~dv~~~~~~~~~~~~v~~   79 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRL---PAKAPLLELDVQNEEHLASLAGRVTE   79 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTS---SSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHc---CCceeeEeeecccccccccccchhhh
Confidence            568999999965  4799999999999999 899888875443 2222221   1257788999999876655543    


Q ss_pred             ------CccEEEEeccCCCCC---------CCCChhhhhhhhhHHHHHHHHHHHHhcC-CcEEEEecCcceeccCCCCCC
Q 021819           80 ------GCKGVFHVASPCTLE---------DPVDPEKELILPAVQGTLNVLEAAKRFG-VRRVVVTSSISAIVPNPGWKG  143 (307)
Q Consensus        80 ------~~d~vi~~a~~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~iSS~~~~~~~~~~~~  143 (307)
                            .+|+++|++|.....         .....+...+..|+.......+...... ...++.++|.......+..  
T Consensus        80 ~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~p~~--  157 (268)
T d2h7ma1          80 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAY--  157 (268)
T ss_dssp             HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCTTT--
T ss_pred             ccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccCccc--
Confidence                  469999999965421         1122335566777777777777665542 2234444443433333332  


Q ss_pred             cccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCC-----CC----cchHHHHH
Q 021819          144 KVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQP-----YL----NASCAVLQ  211 (307)
Q Consensus       144 ~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~-----~~----~~~~~~~~  211 (307)
                                        ..|+.+|...+.+.+.++.+   .|+++++|.||.|.++....     ..    .....+.+
T Consensus       158 ------------------~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  219 (268)
T d2h7ma1         158 ------------------NWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEE  219 (268)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHH
T ss_pred             ------------------chhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHH
Confidence                              56888888888888777655   48999999999997753211     00    01111112


Q ss_pred             HHHcCCCCCCCCcccCcccHHHHHHHHHHhhcC--CCCCceEEecCCcc
Q 021819          212 QLLQGSKDTQEYHWLGAVPVKDVAKAQVLLFES--PAASGRYLCTNGIY  258 (307)
Q Consensus       212 ~~~~~~~~~~~~~~~~~i~~~dva~~~~~~~~~--~~~~g~~~~~~~~~  258 (307)
                      ......|     ..+.+..++|+|+++.+++..  ....|..+..|+++
T Consensus       220 ~~~~~~p-----l~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~  263 (268)
T d2h7ma1         220 GWDQRAP-----IGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA  263 (268)
T ss_dssp             HHHHHCT-----TCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred             HHHhcCC-----CCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCc
Confidence            2222222     123467899999999998843  33457777766654

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.78  E-value=9.8e-18  Score=143.41  Aligned_cols=225  Identities=9%  Similarity=0.058  Sum_probs=141.9

Q ss_pred             CcEEEEeC--CchhhHHHHHHHHHHCCCCeEEEEeCCCCCCc------------ccccCCCCCCCceEEEEc--------
Q 021819            9 EETVCVTG--ANGFIGTWLVKTLLDNNYTSINATVFPGSDSS------------HLFALPGAGDANLRVFEA--------   66 (307)
Q Consensus         9 ~~~ilItG--atG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~------------~~~~~~~~~~~~~~~i~~--------   66 (307)
                      .|.+||||  ++.+||+++++.|.++|+ +|+...+......            .................+        
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNV-KIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCC-EEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            57999999  557999999999999999 8888765432110            000000000001222333        


Q ss_pred             ------------ccCChhHHHHHh-------cCccEEEEeccCCCC------CCCCChhhhhhhhhHHHHHHHHHHHHhc
Q 021819           67 ------------DVLDSGAVSRAV-------EGCKGVFHVASPCTL------EDPVDPEKELILPAVQGTLNVLEAAKRF  121 (307)
Q Consensus        67 ------------D~~d~~~~~~~~-------~~~d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~  121 (307)
                                  |+++.+++++++       .++|++||+||....      +...+++...+++|+.+..++.+++.+.
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                        444554444443       378999999986542      2233457889999999999999998765


Q ss_pred             --CCcEEEEecCcceeccCCCCCCcccccCCCCchhhhcccCccHHHHHHHHHHHHHHHHHh----cCCcEEEEecCcee
Q 021819          122 --GVRRVVVTSSISAIVPNPGWKGKVFDETSWTDLEYCKSRKKWYPVSKTLAEKAAWEFAEK----HGVDVVAIHPATCL  195 (307)
Q Consensus       122 --~~~~~v~iSS~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~----~~i~~~ivrp~~v~  195 (307)
                        ..+++|.+||.++....+..                   ...|+.+|...+.+.+.++.+    +||++++|.||.|-
T Consensus       161 m~~~GsIv~iss~~~~~~~p~y-------------------~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~  221 (329)
T d1uh5a_         161 MKPQSSIISLTYHASQKVVPGY-------------------GGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLK  221 (329)
T ss_dssp             EEEEEEEEEEECGGGTSCCTTC-------------------TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred             cccccccccceeehhccccccc-------------------chhhhhhhccccccchhhHHHHhcccCcEEEEEecCccc
Confidence              23689999987664433321                   146899999998888776643    58999999999987


Q ss_pred             CCCCCCC------------------------------------------CcchHHHHHHHHcCCCCCCCCcccCcccHHH
Q 021819          196 GPLMQPY------------------------------------------LNASCAVLQQLLQGSKDTQEYHWLGAVPVKD  233 (307)
Q Consensus       196 g~~~~~~------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d  233 (307)
                      ++...+.                                          ...............      ....+..++|
T Consensus       222 T~a~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------Pl~R~~~ped  295 (329)
T d1uh5a_         222 SRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYA------PLRQKLLSTD  295 (329)
T ss_dssp             CTTGGGCC------------------------------------------CHHHHHHHHHHHHS------SSCSCCCHHH
T ss_pred             chhhhcccchhhhhhhhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccC------CCCCCcCHHH
Confidence            6321110                                          000111111111111      1345679999


Q ss_pred             HHHHHHHhhcC--CCCCceEEecCCccc
Q 021819          234 VAKAQVLLFES--PAASGRYLCTNGIYQ  259 (307)
Q Consensus       234 va~~~~~~~~~--~~~~g~~~~~~~~~~  259 (307)
                      +|.++++++..  ....|..+.+|++++
T Consensus       296 vA~~v~fLaSd~s~~iTGq~i~VDGG~~  323 (329)
T d1uh5a_         296 IGSVASFLLSRESRAITGQTIYVDNGLN  323 (329)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHhCchhCCccCCeEEECCCcc
Confidence            99999888854  335577877777664

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.75  E-value=7.8e-17  Score=133.09  Aligned_cols=224  Identities=16%  Similarity=0.092  Sum_probs=129.0

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHh--------cC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV--------EG   80 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~--------~~   80 (307)
                      ||+|+||||+++||+++++.|+++|+ +|++.+|+..+.                 ..|+.+.+......        ..
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga-~V~~~~~~~~~~-----------------~~d~~~~~~~~~~~~~~~~~~~~~   62 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDAEV-----------------IADLSTAEGRKQAIADVLAKCSKG   62 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSE-----------------ECCTTSHHHHHHHHHHHHTTCTTC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECChHHH-----------------HHHhcCHHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999 899988864321                 24666654443332        25


Q ss_pred             ccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHH----hcCCcEEEEecCcceeccCCCCCCcccccC--CCCch
Q 021819           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAK----RFGVRRVVVTSSISAIVPNPGWKGKVFDET--SWTDL  154 (307)
Q Consensus        81 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~iSS~~~~~~~~~~~~~~~~E~--~~~~~  154 (307)
                      +|+++|+|+....   .+.......+|..+...+.+...    +........+++..................  .....
T Consensus        63 id~lv~~Ag~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i  139 (257)
T d1fjha_          63 MDGLVLCAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKA  139 (257)
T ss_dssp             CSEEEECCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHH
T ss_pred             CcEEEEcCCCCCc---HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEE
Confidence            7999999987543   34556777888888877766553    334455666665433221110000000000  00000


Q ss_pred             hh------hcccCccHHHHHHHHHHHHHHHHHh---cCCcEEEEecCceeCCCCCCCCcchHHHHHHHHcCCCCCCCCcc
Q 021819          155 EY------CKSRKKWYPVSKTLAEKAAWEFAEK---HGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHW  225 (307)
Q Consensus       155 ~~------~~~~~~~y~~sK~~~e~~~~~~~~~---~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (307)
                      ..      .......|+.+|...+.+.+.++.+   +||++++|.||.|.++........ ..+.+......     ...
T Consensus       140 ~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-~~~~~~~~~~~-----~Pl  213 (257)
T d1fjha_         140 RAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQD-PRYGESIAKFV-----PPM  213 (257)
T ss_dssp             HHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------CC-----CST
T ss_pred             eeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCC-HHHHHHHHhcC-----CCC
Confidence            00      0000134888888888888776644   589999999999988764322110 11111111111     013


Q ss_pred             cCcccHHHHHHHHHHhhc--CCCCCceEEecCCccc
Q 021819          226 LGAVPVKDVAKAQVLLFE--SPAASGRYLCTNGIYQ  259 (307)
Q Consensus       226 ~~~i~~~dva~~~~~~~~--~~~~~g~~~~~~~~~~  259 (307)
                      ..+..++|+|+++.+++.  +....|..+..|++++
T Consensus       214 gR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG~t  249 (257)
T d1fjha_         214 GRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGID  249 (257)
T ss_dssp             TSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred             CCCcCHHHHHHHHHHHhCchhCCccCceEEeCCCcc
Confidence            346789999999998884  3445688777777764

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.45  E-value=5.8e-15  Score=115.96  Aligned_cols=107  Identities=13%  Similarity=0.033  Sum_probs=79.1

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      ++++|+|+||||+|+||+.+++.|+++|+ +|++++|+.++.+.+........ ++....+|++|.+++++++.++|+||
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~iDili   97 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRF-KVNVTAAETADDASRAEAVKGAHFVF   97 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHH-TCCCEEEECCSHHHHHHHTTTCSEEE
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhcc-chhhcccchHHHHHHHHHHHhcc-chhhhhhhcccHHHHHHHhcCcCeee
Confidence            46789999999999999999999999999 89999998766544332211111 45677899999999999999999999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHH
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNV  114 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l  114 (307)
                      ||||........+.+...+++|+.+..+.
T Consensus        98 n~Ag~g~~~~~~e~~~~~~~~nv~~~~~~  126 (191)
T d1luaa1          98 TAGAIGLELLPQAAWQNESSIEIVADYNA  126 (191)
T ss_dssp             ECCCTTCCCBCHHHHHTCTTCCEEEECCC
T ss_pred             ecCccccccCCHHHHHhhhcceeehhHhh
Confidence            99987543333334445555555444433

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.63  E-value=1.2e-07  Score=69.52  Aligned_cols=115  Identities=14%  Similarity=0.065  Sum_probs=80.2

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEecc
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a~   89 (307)
                      ||.|+||+|.+|++++..|..+|. .+++.++.++.+.+.+.-....   .......-+ ...+..+.++++|+||.+||
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~---~~~~~~~~~-~~~~~~~~~~~aDivVitag   77 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIE---TRATVKGYL-GPEQLPDCLKGCDVVVIPAG   77 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSS---SSCEEEEEE-SGGGHHHHHTTCSEEEECCS
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhh---hhcCCCeEE-cCCChHHHhCCCCEEEECCC
Confidence            799999999999999999998885 6888888765433222111111   111111112 34456677899999999999


Q ss_pred             CCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           90 PCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      .....  .....+.++.|....+.+++.+.+++-+.++.+-|
T Consensus        78 ~~~~~--g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt  117 (144)
T d1mlda1          78 VPRKP--GMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (144)
T ss_dssp             CCCCT--TCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             cCCCC--CCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            75432  23567899999999999999999987554555544

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.59  E-value=1.1e-07  Score=68.79  Aligned_cols=71  Identities=18%  Similarity=0.153  Sum_probs=59.3

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHH-hcCccEEEEe
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHV   87 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~d~vi~~   87 (307)
                      |+|+|+|+ |.+|+.|++.|.+.|+ +|++++++++..+.+....     +...+.+|.+|++.++++ ++++|.++-+
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~~~~-----~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~   72 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDAGIEDADMYIAV   72 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC-CcceecCChhhhhhhhhhh-----hhhhccCcccchhhhhhcChhhhhhhccc
Confidence            48999997 9999999999999999 9999999876655543311     567899999999999887 5788988876

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=98.32  E-value=1.5e-07  Score=69.86  Aligned_cols=119  Identities=11%  Similarity=0.082  Sum_probs=79.0

Q ss_pred             cccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-------CCCCCCCceEEEEcccCChhHHH
Q 021819            3 SEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-------LPGAGDANLRVFEADVLDSGAVS   75 (307)
Q Consensus         3 ~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~i~~D~~d~~~~~   75 (307)
                      +|+++ .+||.|.|+ |.+|+.++..|..++..+++.++.++...+....       ....   .....     .....+
T Consensus         2 ~~~~k-~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~---~~~~~-----~~~~~~   71 (154)
T d1pzga1           2 ALVQR-RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDT---NVSVR-----AEYSYE   71 (154)
T ss_dssp             CCCSC-CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTC---CCCEE-----EECSHH
T ss_pred             ccccC-CCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCC---eeEEe-----ccCchh
Confidence            45443 568999997 9999999998888887688888876644322111       0000   11111     112234


Q ss_pred             HHhcCccEEEEeccCCCCCCC---CChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           76 RAVEGCKGVFHVASPCTLEDP---VDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        76 ~~~~~~d~vi~~a~~~~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      +.++++|+|+-++|.......   .....+.+..|......+++.+.+.+-+.++.+-|
T Consensus        72 ~~~~~adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs  130 (154)
T d1pzga1          72 AALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  130 (154)
T ss_dssp             HHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             hhhcCCCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            667899999999987654321   12456788999999999999999887655555554

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.29  E-value=2.8e-06  Score=62.34  Aligned_cols=117  Identities=15%  Similarity=0.138  Sum_probs=77.7

Q ss_pred             ccccCCcEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcc----cccCCCCCCCceEEEEcccCChhHHHHHh
Q 021819            4 EAEKEEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFALPGAGDANLRVFEADVLDSGAVSRAV   78 (307)
Q Consensus         4 m~~~~~~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~i~~D~~d~~~~~~~~   78 (307)
                      |.+...+||.|+|+ |++|+.++..|..+|. .+++.++++++..+.    +..........+.....|   +    +.+
T Consensus         1 m~~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d---~----~~l   72 (148)
T d1ldna1           1 MKNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGD---Y----DDC   72 (148)
T ss_dssp             CTTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECC---G----GGT
T ss_pred             CCCCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECC---H----HHh
Confidence            44555779999996 9999999999999875 579999886544211    110000011123333333   3    346


Q ss_pred             cCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEec
Q 021819           79 EGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTS  130 (307)
Q Consensus        79 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~iS  130 (307)
                      +++|+||.++|.....  .....+.+..|..-.+.+++.+.+++-+ .++.+|
T Consensus        73 ~daDvvvitag~~~~~--~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt  123 (148)
T d1ldna1          73 RDADLVVICAGANQKP--GETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (148)
T ss_dssp             TTCSEEEECCSCCCCT--TTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             ccceeEEEeccccccc--CcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence            7899999999875442  2345688899999999999999888643 455544

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.28  E-value=5.2e-07  Score=65.34  Aligned_cols=72  Identities=14%  Similarity=0.119  Sum_probs=58.5

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHH-hcCccEEEEec
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHVA   88 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~d~vi~~a   88 (307)
                      |+++|.|+ |.+|+++++.|.+.|+ +|++++.++...+.+...      ....+.+|.++++.+.++ ++++|.||-+.
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~-~vvvid~d~~~~~~~~~~------~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~   72 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASY------ATHAVIANATEENELLSLGIRNFEYVIVAI   72 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTC-CCEEEESCHHHHHHTTTT------CSEEEECCTTCTTHHHHHTGGGCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC-eEEEecCcHHHHHHHHHh------CCcceeeecccchhhhccCCccccEEEEEc
Confidence            57889986 9999999999999999 899998877665555432      567788999999999887 77899887764


Q ss_pred             c
Q 021819           89 S   89 (307)
Q Consensus        89 ~   89 (307)
                      +
T Consensus        73 ~   73 (134)
T d2hmva1          73 G   73 (134)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.25  E-value=3.6e-06  Score=61.36  Aligned_cols=113  Identities=12%  Similarity=0.102  Sum_probs=75.1

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCC--c----ccccC-CCCCCCceEEEEcccCChhHHHHHhcCc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDS--S----HLFAL-PGAGDANLRVFEADVLDSGAVSRAVEGC   81 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~--~----~~~~~-~~~~~~~~~~i~~D~~d~~~~~~~~~~~   81 (307)
                      |||.|+||+|.+|+.++..|..++. +++..+++++...  +    .+... ..... +++....--.|.    +.++++
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~-~~~~~~~~~~d~----~~l~~a   75 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRS-DANIYVESDENL----RIIDES   75 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCC-CCEEEEEETTCG----GGGTTC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhccccccc-CCccccCCcchH----HHhccc
Confidence            4899999999999999999999984 6898888864321  1    11110 10011 222211111122    356799


Q ss_pred             cEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEe
Q 021819           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT  129 (307)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~i  129 (307)
                      |+||-+||.....  .....+.+..|....+.+++.+.+++-+.++.+
T Consensus        76 DvVVitAG~~~~~--g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iivV  121 (145)
T d1hyea1          76 DVVIITSGVPRKE--GMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVI  121 (145)
T ss_dssp             SEEEECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred             eEEEEecccccCC--CCChhhhhhhhHHHHHHHHHHHhccCCCeEEEE
Confidence            9999999975442  234678899999999999999988865555544

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.23  E-value=1.4e-06  Score=66.16  Aligned_cols=74  Identities=19%  Similarity=0.191  Sum_probs=58.5

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      .|+|+|.|| |++|+.+++.|.++|+ +|++.+|+..+.+.+.....    .......+..+.......+...|.++.+.
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~-~V~v~dr~~~~a~~l~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~i~~~   75 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQ----HSTPISLDVNDDAALDAEVAKHDLVISLI   75 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTC-EEEEEESCHHHHHHHHTTCT----TEEEEECCTTCHHHHHHHHTTSSEEEECS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-EEEEEECChHHHHHHHhccc----ccccccccccchhhhHhhhhccceeEeec
Confidence            479999986 9999999999999999 99999998877766554221    44455566777777888888888888764

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.22  E-value=8.7e-06  Score=59.29  Aligned_cols=113  Identities=17%  Similarity=0.112  Sum_probs=72.7

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHC-C-CCeEEEEeCCCCCCcc-cccCCCC-CCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDN-N-YTSINATVFPGSDSSH-LFALPGA-GDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~-g-~~~V~~~~r~~~~~~~-~~~~~~~-~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      |||.|+|++|.+|++++-.|..+ + .+++..++..+ .... ...+... .......+ ..   .+.. +.++++|+||
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~-~~---~~~~-~~~~~aDvvv   74 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGF-SG---EDAT-PALEGADVVL   74 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEE-CS---SCCH-HHHTTCSEEE
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEE-Ec---CCCc-cccCCCCEEE
Confidence            48999999999999999887643 4 24888888753 2211 0011000 00022221 12   2223 3568999999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEec
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTS  130 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~iS  130 (307)
                      .+||.....  .....+.+..|....+.+.+.+.+++-+ .++.+|
T Consensus        75 itaG~~~k~--g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvt  118 (145)
T d2cmda1          75 ISAGVRRKP--GMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (145)
T ss_dssp             ECCSCCCCT--TCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             ECCCccCCC--CcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEcc
Confidence            999975442  3456788999999999999999988644 355554

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.21  E-value=4.4e-06  Score=61.07  Aligned_cols=112  Identities=8%  Similarity=0.104  Sum_probs=71.5

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcc----cccCCCCCCCceEEEEcccCChhHHHHHhcCccE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~   83 (307)
                      .+||.|.|+ |++|+.++..|+.+|. ++|+.+++++...+.    +........ ......+|   ++    .++++|+
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~-~~~~~~~d---~~----~~~~adi   75 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTA-PKKIYSGE---YS----DCKDADL   75 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSC-CCEEEECC---GG----GGTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccC-CceEeecc---HH----HhccccE
Confidence            569999995 9999999999999883 589999986543221    100000011 22333344   33    3579999


Q ss_pred             EEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      ||.+||.....  .....+.+..|....+.+.+.+.+++-+.++.+-|
T Consensus        76 vvitag~~~~~--g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          76 VVITAGAPQKP--GESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             EEECCCC------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEecccccCC--CCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence            99999875442  23456788999999999999999987655555554

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.01  E-value=2.1e-05  Score=57.18  Aligned_cols=88  Identities=11%  Similarity=0.041  Sum_probs=54.1

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCC---CCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNN---YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g---~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      ||+|.|.||||++|+.+++.|+++.   ..+++.+.++...........      -.....++.+.+    .++++|++|
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~------~~~~~~~~~~~~----~~~~~DivF   70 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGG------TTGTLQDAFDLE----ALKALDIIV   70 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGT------CCCBCEETTCHH----HHHTCSEEE
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccC------Cceeeecccchh----hhhcCcEEE
Confidence            6799999999999999999888763   246666665443332221110      011112333333    357899999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR  124 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  124 (307)
                      .+++.                  ..+..+.+.+.+.|.+
T Consensus        71 ~a~~~------------------~~s~~~~~~~~~~g~~   91 (146)
T d1t4ba1          71 TCQGG------------------DYTNEIYPKLRESGWQ   91 (146)
T ss_dssp             ECSCH------------------HHHHHHHHHHHHTTCC
T ss_pred             EecCc------------------hHHHHhhHHHHhcCCC
Confidence            98643                  1245566677777754

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.98  E-value=7.1e-06  Score=61.82  Aligned_cols=75  Identities=21%  Similarity=0.144  Sum_probs=55.5

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      .++++|+|+||+|.+|...++.+...|. +|+++++++++.+.++++      ++..+ .|..+.......-.++|+||+
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~-~vi~~~~~~~~~~~~~~l------Ga~~~-i~~~~~~~~~~~~~g~D~v~d   97 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLAL------GAEEA-ATYAEVPERAKAWGGLDLVLE   97 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHT------TCSEE-EEGGGHHHHHHHTTSEEEEEE
T ss_pred             CCCCEEEEEeccccchhhhhhhhccccc-cccccccccccccccccc------cccee-eehhhhhhhhhcccccccccc
Confidence            3577999999999999999999999999 899999987777777665      33222 244343322233468999999


Q ss_pred             ecc
Q 021819           87 VAS   89 (307)
Q Consensus        87 ~a~   89 (307)
                      +.|
T Consensus        98 ~~G  100 (171)
T d1iz0a2          98 VRG  100 (171)
T ss_dssp             CSC
T ss_pred             ccc
Confidence            865

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.93  E-value=3e-06  Score=61.83  Aligned_cols=113  Identities=12%  Similarity=0.063  Sum_probs=74.6

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCccccc-CCCC---CCCceEEEEcccCChhHHHHHhcCccEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFA-LPGA---GDANLRVFEADVLDSGAVSRAVEGCKGV   84 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~-~~~~---~~~~~~~i~~D~~d~~~~~~~~~~~d~v   84 (307)
                      |||.|+|+ |.+|+.++..|..+|. +++..+++++........ +...   .....++...  .|++    .++++|+|
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~----~~~dadvv   73 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYA----DTANSDIV   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGG----GGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHH----HhcCCeEE
Confidence            47999996 9999999999999984 589999987655332111 0000   0002222221  2332    46899999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      |-+||.....  .....+.+..|..-...+++.+.+++-+.++.+-|
T Consensus        74 vitag~~~~~--g~~r~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1guza1          74 IITAGLPRKP--GMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (142)
T ss_dssp             EECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             EEEEecCCCC--CCchHHHHHHHHHHHHHHHHHhhccCCCeEEEEec
Confidence            9999875432  23467888999999999999998876444444443

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.92  E-value=7.1e-06  Score=59.63  Aligned_cols=112  Identities=14%  Similarity=0.137  Sum_probs=70.4

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcccc-cCCC--CCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLF-ALPG--AGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~-~~~~--~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      +||.|+|+ |.+|+.++-.|+.++. .++..++++++..+... .+..  ..........+   ++    +.++++|+|+
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~----~~~~~adivv   73 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DY----SDVKDCDVIV   73 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CG----GGGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cH----HHhCCCceEE
Confidence            47888997 9999999999999875 58999998765543211 1110  00112222222   22    2467999999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      -+||.....  .....+.+..|..-...+++.+.+++-+.++.+-|
T Consensus        74 itag~~~~~--~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvt  117 (142)
T d1y6ja1          74 VTAGANRKP--GETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  117 (142)
T ss_dssp             ECCCC--------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             EecccccCc--CcchhHHhhHHHHHHHHHHHHhhccCCCceEEEec
Confidence            999875432  24467889999999999999999886544444433

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.91  E-value=3.7e-06  Score=64.08  Aligned_cols=78  Identities=14%  Similarity=0.064  Sum_probs=54.7

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHh--cCccEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV--EGCKGVF   85 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~--~~~d~vi   85 (307)
                      ++.+|+|+||+|.+|...++.....|. +|+++++++++.+.++.+..    ...+..-|-...+.+.+..  .++|+|+
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~Ga----~~vi~~~~~~~~~~~~~~~~~~Gvd~v~  103 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGF----DAAFNYKTVNSLEEALKKASPDGYDCYF  103 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTC----SEEEETTSCSCHHHHHHHHCTTCEEEEE
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCC-EEEEeCCCHHHHHHHHhhhh----hhhcccccccHHHHHHHHhhcCCCceeE
Confidence            478999999999999999999999999 99999998777666666521    1112112222223333333  3689999


Q ss_pred             EeccC
Q 021819           86 HVASP   90 (307)
Q Consensus        86 ~~a~~   90 (307)
                      ++.|.
T Consensus       104 D~vG~  108 (182)
T d1v3va2         104 DNVGG  108 (182)
T ss_dssp             ESSCH
T ss_pred             EecCc
Confidence            99764

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.90  E-value=5e-05  Score=54.88  Aligned_cols=110  Identities=15%  Similarity=0.050  Sum_probs=73.6

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCC--Cc----ccccCCCCCCCceEEEEcccCChhHHHHHhcCccE
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSD--SS----HLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~--~~----~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~   83 (307)
                      ||.|+||+|.+|++++..|..++. +++..++....+  .+    .+........ ..+....|   ++    .++++|+
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~-~~~i~~~~---~~----~~~~aDi   73 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDS-NTRVRQGG---YE----DTAGSDV   73 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTC-CCEEEECC---GG----GGTTCSE
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccC-CceEeeCC---HH----HhhhcCE
Confidence            799999999999999999999985 578887753211  11    1111000111 33333333   33    2579999


Q ss_pred             EEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcE-EEEec
Q 021819           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR-VVVTS  130 (307)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~iS  130 (307)
                      ||-+||.....  .....+.++.|..-.+.+.+.+.+.+-+. ++.+|
T Consensus        74 VvitaG~~~~~--g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          74 VVITAGIPRQP--GQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             EEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             EEEeccccccc--CCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEec
Confidence            99999975442  24567899999999999999999886443 44443

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.86  E-value=2.6e-06  Score=65.66  Aligned_cols=40  Identities=18%  Similarity=0.109  Sum_probs=34.6

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL   50 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~   50 (307)
                      |||.|+||+|.+|++|++.|++.|+ +|++..|++++.+.+
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~-~V~l~~R~~e~~~~l   40 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGH-EIVVGSRREEKAEAK   40 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Confidence            4788999999999999999999999 999999987655443

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.85  E-value=5.4e-06  Score=61.57  Aligned_cols=74  Identities=16%  Similarity=0.139  Sum_probs=56.8

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      .+++++|+|.|+ |-+|+.+++.|...|..+++...|+.++.+.+....     +.+     ..+.+++.+.+.++|+||
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~-----~~~-----~~~~~~~~~~l~~~Divi   89 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL-----GGE-----AVRFDELVDHLARSDVVV   89 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH-----TCE-----ECCGGGHHHHHHTCSEEE
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh-----hcc-----cccchhHHHHhccCCEEE
Confidence            356889999997 999999999999999878999998766654443311     222     234567888899999999


Q ss_pred             EeccC
Q 021819           86 HVASP   90 (307)
Q Consensus        86 ~~a~~   90 (307)
                      .+.+.
T Consensus        90 ~atss   94 (159)
T d1gpja2          90 SATAA   94 (159)
T ss_dssp             ECCSS
T ss_pred             EecCC
Confidence            99765

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.84  E-value=7.9e-05  Score=54.35  Aligned_cols=115  Identities=10%  Similarity=0.075  Sum_probs=74.7

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCC----CCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA----GDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      +||.|.|+ |.+|++++..|..++..++..+++++...+........    ..........+  ++    +.++++|+||
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~----~~~~~advvv   76 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TY----DDLAGADVVI   76 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CG----GGGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cc----cccCCCcEEE
Confidence            58999995 99999999988888877899998866543221100000    00011222211  22    3457899999


Q ss_pred             EeccCCCCCCC---CChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           86 HVASPCTLEDP---VDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        86 ~~a~~~~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      -++|.......   .......+..|....+.+.+.+.+.+-+.++.+-|
T Consensus        77 itag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivvt  125 (150)
T d1t2da1          77 VTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  125 (150)
T ss_dssp             ECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            99997654322   22356788999999999999999887554544443

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=1.2e-05  Score=60.70  Aligned_cols=75  Identities=13%  Similarity=0.104  Sum_probs=54.3

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHh-----cCcc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV-----EGCK   82 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~-----~~~d   82 (307)
                      ++.+|+|+||+|.+|...++.+...|. +|+++++++++.+.++++      ++..+ .|..+.+..+++.     .++|
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~-~vi~~~~~~~~~~~~~~~------Ga~~v-i~~~~~~~~~~i~~~t~~~g~d   99 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQN------GAHEV-FNHREVNYIDKIKKYVGEKGID   99 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT------TCSEE-EETTSTTHHHHHHHHHCTTCEE
T ss_pred             CCCEEEEEeccccccccccccccccCc-cccccccccccccccccc------Ccccc-cccccccHHHHhhhhhccCCce
Confidence            567999999999999999999999999 899999876666666555      22222 3555554433332     2589


Q ss_pred             EEEEeccC
Q 021819           83 GVFHVASP   90 (307)
Q Consensus        83 ~vi~~a~~   90 (307)
                      +|+.+.|.
T Consensus       100 ~v~d~~g~  107 (174)
T d1yb5a2         100 IIIEMLAN  107 (174)
T ss_dssp             EEEESCHH
T ss_pred             EEeecccH
Confidence            99998653

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.76  E-value=6e-05  Score=57.10  Aligned_cols=82  Identities=15%  Similarity=0.014  Sum_probs=62.6

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccC----CCCCCCceEEEEcccCChhHHHHHhcCcc
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL----PGAGDANLRVFEADVLDSGAVSRAVEGCK   82 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~i~~D~~d~~~~~~~~~~~d   82 (307)
                      .++++|+|.|+ |+.|++++..|.+.|..+++...|+++..+.+..+    ....  .......|+.+.+.+.+.+..+|
T Consensus        16 l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d   92 (182)
T d1vi2a1          16 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENT--DCVVTVTDLADQQAFAEALASAD   92 (182)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS--SCEEEEEETTCHHHHHHHHHTCS
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhc--CcceEeeecccccchhhhhcccc
Confidence            46789999996 89999999999999988899999987665433221    1001  23345678889898999999999


Q ss_pred             EEEEeccCC
Q 021819           83 GVFHVASPC   91 (307)
Q Consensus        83 ~vi~~a~~~   91 (307)
                      +|||+....
T Consensus        93 iiIN~Tp~G  101 (182)
T d1vi2a1          93 ILTNGTKVG  101 (182)
T ss_dssp             EEEECSSTT
T ss_pred             eeccccCCc
Confidence            999997653

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.76  E-value=1.1e-05  Score=61.46  Aligned_cols=75  Identities=17%  Similarity=0.098  Sum_probs=54.4

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHh-----cCcc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV-----EGCK   82 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~-----~~~d   82 (307)
                      ++.+|+|+||+|.+|...++.+...|. +|+++++++++.+.+++.      ++..+ .|..+++..+++.     .++|
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~-~vi~~~~~~~~~~~l~~~------Ga~~v-i~~~~~~~~~~v~~~t~~~g~d   96 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRL------GVEYV-GDSRSVDFADEILELTDGYGVD   96 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTT------CCSEE-EETTCSTHHHHHHHHTTTCCEE
T ss_pred             CCCEEEEECCCCCcccccchhhccccc-cceeeecccccccccccc------ccccc-ccCCccCHHHHHHHHhCCCCEE
Confidence            467999999999999999999988999 899988877666666554      22222 3444544333332     3689


Q ss_pred             EEEEeccC
Q 021819           83 GVFHVASP   90 (307)
Q Consensus        83 ~vi~~a~~   90 (307)
                      ++|.+.|.
T Consensus        97 ~v~d~~g~  104 (183)
T d1pqwa_          97 VVLNSLAG  104 (183)
T ss_dssp             EEEECCCT
T ss_pred             EEEecccc
Confidence            99999763

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.75  E-value=5.7e-06  Score=61.16  Aligned_cols=116  Identities=16%  Similarity=0.037  Sum_probs=70.4

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCC---eEEEE--eCCCCCCcccccC----CCCCCCceEEEEcccCChhHHHHHhc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYT---SINAT--VFPGSDSSHLFAL----PGAGDANLRVFEADVLDSGAVSRAVE   79 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~---~V~~~--~r~~~~~~~~~~~----~~~~~~~~~~i~~D~~d~~~~~~~~~   79 (307)
                      .+||.|+||+|++|++++-.|...+..   +.+..  .........+..+    ..........+...    ....+.++
T Consensus         4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~   79 (154)
T d1y7ta1           4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEAT----DDPKVAFK   79 (154)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE----SCHHHHTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccC----Cchhhhcc
Confidence            459999999999999999999987531   11111  1111111111110    00000022222222    22346788


Q ss_pred             CccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCC--cEEEEec
Q 021819           80 GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV--RRVVVTS  130 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~iS  130 (307)
                      ++|+||-++|....  +..+..+.+..|+.-.+.+.+.+.++..  ..++.+|
T Consensus        80 ~advViitaG~~~~--pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          80 DADYALLVGAAPRK--AGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             TCSEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             cccEEEeecCcCCC--CCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence            99999999997554  2345678899999999999999988632  3444544

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.74  E-value=6e-05  Score=58.95  Aligned_cols=76  Identities=11%  Similarity=0.075  Sum_probs=53.7

Q ss_pred             ccCCcEEEEeCC----------------chhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccC
Q 021819            6 EKEEETVCVTGA----------------NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL   69 (307)
Q Consensus         6 ~~~~~~ilItGa----------------tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~   69 (307)
                      .+++++||||+|                ||..|.+|++++..+|+ +|+.+.-.......         ..+..+...  
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga-~V~li~g~~~~~~p---------~~~~~~~~~--   70 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGA-NVTLVSGPVSLPTP---------PFVKRVDVM--   70 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTC-EEEEEECSCCCCCC---------TTEEEEECC--
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCC-chhhhhcccccCcc---------cccccceeh--
Confidence            456889999986                69999999999999999 88887653322110         145555433  


Q ss_pred             ChhH----HHHHhcCccEEEEeccCCCC
Q 021819           70 DSGA----VSRAVEGCKGVFHVASPCTL   93 (307)
Q Consensus        70 d~~~----~~~~~~~~d~vi~~a~~~~~   93 (307)
                      ..++    +.+.++++|++|++|+....
T Consensus        71 t~~~m~~~~~~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          71 TALEMEAAVNASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             SHHHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred             hhHHHHHHHHhhhccceeEeeeechhhh
Confidence            3333    33445689999999998775

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.74  E-value=2.3e-05  Score=58.95  Aligned_cols=116  Identities=16%  Similarity=0.035  Sum_probs=70.8

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCC---C---eEEEEeCCCCCC--ccccc-CCCCCCCceEEEEcccCChhHHHHHhc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNY---T---SINATVFPGSDS--SHLFA-LPGAGDANLRVFEADVLDSGAVSRAVE   79 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~---~---~V~~~~r~~~~~--~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~   79 (307)
                      ..||.||||+|.||++++-.|.+...   .   .+..++......  +.... +..........+.  ++  ....+.++
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~--~~--~~~~~~~~   99 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVS--IG--IDPYEVFE   99 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEE--EE--SCHHHHTT
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcc--cc--ccchhhcc
Confidence            45899999999999999999987532   1   233333322111  11110 0000000122111  11  12446789


Q ss_pred             CccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCC--cEEEEec
Q 021819           80 GCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV--RRVVVTS  130 (307)
Q Consensus        80 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~v~iS  130 (307)
                      ++|+||-++|....  +-....+.+..|......+.+++.++.-  .+++.+|
T Consensus       100 ~aDvVvi~ag~~rk--pg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1         100 DVDWALLIGAKPRG--PGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             TCSEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             CCceEEEeeccCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            99999999987544  3345678999999999999999988632  3455554

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.71  E-value=1.2e-05  Score=60.98  Aligned_cols=75  Identities=12%  Similarity=0.058  Sum_probs=56.4

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHh---c--Ccc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV---E--GCK   82 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~---~--~~d   82 (307)
                      .+.+|+|+||+|.+|..+++.+...|. +|+++++++++.+.++++      +...+ .|..+++..+++.   .  ++|
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga-~Vi~~~~s~~k~~~~~~l------Ga~~v-i~~~~~d~~~~v~~~t~g~g~d   99 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKA------GAWQV-INYREEDLVERLKEITGGKKVR   99 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHH------TCSEE-EETTTSCHHHHHHHHTTTCCEE
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCC-eEeecccchHHHHHHHhc------CCeEE-EECCCCCHHHHHHHHhCCCCeE
Confidence            467999999999999999999999999 999999988877777665      33322 3555554333332   2  579


Q ss_pred             EEEEeccC
Q 021819           83 GVFHVASP   90 (307)
Q Consensus        83 ~vi~~a~~   90 (307)
                      +|+.+.+.
T Consensus       100 ~v~d~~g~  107 (179)
T d1qora2         100 VVYDSVGR  107 (179)
T ss_dssp             EEEECSCG
T ss_pred             EEEeCccH
Confidence            99999764

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.70  E-value=0.00019  Score=51.78  Aligned_cols=110  Identities=13%  Similarity=0.009  Sum_probs=74.3

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcc----c---ccCCCCCCCceEEEEcccCChhHHHHHhcCc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----L---FALPGAGDANLRVFEADVLDSGAVSRAVEGC   81 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~----~---~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~   81 (307)
                      |||.|+|+ |.+|++++..|..+|. .++..++++++..+.    +   ......   .......  .|++    .++++
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~---~~~i~~~--~d~~----~~~~a   70 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDK---YPKIVGG--ADYS----LLKGS   70 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTC---CCEEEEE--SCGG----GGTTC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCC---CCccccC--CCHH----Hhccc
Confidence            48899996 9999999999998874 689999876544321    1   001110   1222221  1222    56899


Q ss_pred             cEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           82 KGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        82 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      |+||-.||.....  .....+.+..|..-...+.+.+.+.+-..++.+-|
T Consensus        71 diVvitag~~~~~--g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          71 EIIVVTAGLARKP--GMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             SEEEECCCCCCCS--SCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             cEEEEeccccCCC--CCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence            9999999865442  23567888999999999999999886554555554

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.70  E-value=5.6e-05  Score=55.45  Aligned_cols=42  Identities=14%  Similarity=0.248  Sum_probs=36.8

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCc
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS   48 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~   48 (307)
                      +..|++|.|.||.|.+|+.+++.|.++|+ +|.+.+|+.....
T Consensus         6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G~-~V~~~d~~~~~~~   47 (152)
T d2pv7a2           6 NSDIHKIVIVGGYGKLGGLFARYLRASGY-PISILDREDWAVA   47 (152)
T ss_dssp             CTTCCCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTTCGGGH
T ss_pred             CCCCCeEEEEcCCCHHHHHHHHHHHHcCC-CcEeccccccccc
Confidence            44578999999999999999999999999 9999999765543

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.68  E-value=6.1e-05  Score=55.52  Aligned_cols=112  Identities=13%  Similarity=0.097  Sum_probs=74.7

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcc----cccCCCCCCCceEEEEcccCChhHHHHHhcCccE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~   83 (307)
                      .+||.|.|+ |.+|+.++..|..+|. .+++.++++++..+.    +........ ....+..  .|++    .++++|+
T Consensus        20 ~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~-~~~~~~~--~d~~----~~~~adi   91 (160)
T d1i0za1          20 NNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQ-TPKIVAD--KDYS----VTANSKI   91 (160)
T ss_dssp             SSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCC-CSEEEEC--SSGG----GGTTCSE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccC-CCeEEec--cchh----hcccccE
Confidence            469999996 9999999999999985 689988886444321    111000001 1111211  2333    3679999


Q ss_pred             EEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcE-EEEec
Q 021819           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR-VVVTS  130 (307)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~iS  130 (307)
                      ||.+||.....  .....+.+..|....+.+.+.+.+.+-+- ++.+|
T Consensus        92 VVitAg~~~~~--g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvt  137 (160)
T d1i0za1          92 VVVTAGVRQQE--GESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVS  137 (160)
T ss_dssp             EEECCSCCCCT--TCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEEecCCcccc--CcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            99999976542  34567888999999999999998886443 44444

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.67  E-value=0.00018  Score=51.84  Aligned_cols=111  Identities=11%  Similarity=0.130  Sum_probs=73.4

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCccccc-C---CCCCCCceEEEEcccCChhHHHHHhcCccEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFA-L---PGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~-~---~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~v   84 (307)
                      |||.|.|+ |.+|+.++..|+.++. .++..++++++..+.... +   ..... .......   |++    .++++|+|
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~-~~~~~~~---~~~----~~~~adiv   71 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTR-RANIYAG---DYA----DLKGSDVV   71 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSC-CCEEEEC---CGG----GGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccc-cccccCC---cHH----HhcCCCEE
Confidence            48899996 9999999999988874 589988876543321100 0   00001 2233222   332    36799999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      |-+||.....  .....+.+..|..-.+.+.+.+.+.+-+.++.+-|
T Consensus        72 vitag~~~~~--g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          72 IVAAGVPQKP--GETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             EECCCCCCCS--SCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEecccccCC--CcchhhhhccccchHHHHHHHHHhcCCCcEEEEeC
Confidence            9999875542  23456888999999999999999886554555444

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.67  E-value=1.2e-05  Score=51.47  Aligned_cols=44  Identities=27%  Similarity=0.283  Sum_probs=37.9

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA   52 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~   52 (307)
                      ++.+|+|+||+|.+|...++.+...|+ +|+++.+++++.+.+++
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~-~Vi~~t~s~~k~~~~~~   74 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKS   74 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHH
Confidence            467899999999999999999888899 89999998877665543

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.65  E-value=7.7e-05  Score=54.18  Aligned_cols=114  Identities=14%  Similarity=0.079  Sum_probs=71.0

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCccccc-C---CCCCCCceEEEEcccCChhHHHHHhcCccEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFA-L---PGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~-~---~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~v   84 (307)
                      |||.|+|+ |.+|+.++..|+.+|. .+++.+++++.+.+.... +   .............   |++    .++++|+|
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~---d~~----~l~~adiV   73 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIN---DWA----ALADADVV   73 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEES---CGG----GGTTCSEE
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceecc---CHH----HhccccEE
Confidence            68999995 9999999999998874 588888876543221100 0   0000002222222   333    35899999


Q ss_pred             EEeccCCCCC--CCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           85 FHVASPCTLE--DPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        85 i~~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      |-+||.....  .......+.++.|....+.+.+.+.+.+-..++.+-|
T Consensus        74 VitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  122 (146)
T d1hyha1          74 ISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (146)
T ss_dssp             EECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEec
Confidence            9999864321  1122345678889999999999999887544555444

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.65  E-value=7.7e-05  Score=53.96  Aligned_cols=113  Identities=14%  Similarity=0.108  Sum_probs=68.7

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCC---CCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGA---GDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~---~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      +||.|+|+ |.+|+.++-.|..++..+++.++.+++....... +...   ......+...  .|++    .++++|+||
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~----~~~~advvv   74 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYA----DTANSDVIV   74 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGG----GGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHH----HhcCCCEEE
Confidence            48999996 9999999999988886688888876654322110 0000   0001111111  1222    357899999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      -+||.....  .....+.+..|......+++.+.+.+-+.++.+.|
T Consensus        75 itag~~~~~--~~~r~dl~~~N~~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          75 VTSGAPRKP--GMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             ECCSCC-----------CHHHHHHHHHHHHHHHGGGCTTCEEEECS
T ss_pred             EeeeccCCc--CcchhHHHhHHHHHHHHHHHHHhccCCCceEEEeC
Confidence            999975432  23446778899999999999998876544555444

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.64  E-value=3e-05  Score=58.40  Aligned_cols=75  Identities=21%  Similarity=0.239  Sum_probs=52.2

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCCh-hHHHHHh--cCccEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS-GAVSRAV--EGCKGV   84 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~-~~~~~~~--~~~d~v   84 (307)
                      ++.+|||+||+|++|...++.+...|. +|+++.+++++.+.+..+.      ...+ .|-.+. ++.....  +++|+|
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga-~Viat~~s~~k~~~~~~lG------a~~v-i~~~~~~~~~~~~~~~~gvD~v  102 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLG------AKEV-LAREDVMAERIRPLDKQRWAAA  102 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTT------CSEE-EECC---------CCSCCEEEE
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCC-ceEEecCchHHHHHHHhcc------ccee-eecchhHHHHHHHhhccCcCEE
Confidence            356899999999999999999999999 8999999988887777662      2221 122221 1121222  268999


Q ss_pred             EEeccC
Q 021819           85 FHVASP   90 (307)
Q Consensus        85 i~~a~~   90 (307)
                      |++.|.
T Consensus       103 id~vgg  108 (176)
T d1xa0a2         103 VDPVGG  108 (176)
T ss_dssp             EECSTT
T ss_pred             EEcCCc
Confidence            999875

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.63  E-value=7.4e-05  Score=55.50  Aligned_cols=73  Identities=10%  Similarity=0.072  Sum_probs=48.7

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEecc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a~   89 (307)
                      |||+|.|+ |.+|+.++..|.+.|+ +|..+.|++.............  ..........+.    +.+..+|+||.+.-
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~~----~~~~~~D~iii~vk   72 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLVETDG--SIFNESLTANDP----DFLATSDLLLVTLK   72 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEECTTS--CEEEEEEEESCH----HHHHTCSEEEECSC
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCC-ceEEEEcCHHHhhhhccccCCc--cccccccccchh----hhhcccceEEEeec
Confidence            48999997 9999999999999999 9999999876655443322111  111111111222    34468999999854


Q ss_pred             C
Q 021819           90 P   90 (307)
Q Consensus        90 ~   90 (307)
                      .
T Consensus        73 a   73 (167)
T d1ks9a2          73 A   73 (167)
T ss_dssp             G
T ss_pred             c
Confidence            3

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.61  E-value=0.00024  Score=51.21  Aligned_cols=110  Identities=13%  Similarity=0.062  Sum_probs=73.4

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCcc----cccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSH----LFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      ||.|+|+ |.+|++++..|..+|. ++++.+++++...+.    +........ .......  .+.+    .++++|+||
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~-~~~i~~~--~~~~----~~~daDvVV   74 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYP-TVSIDGS--DDPE----ICRDADMVV   74 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGST-TCEEEEE--SCGG----GGTTCSEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCC-CceeecC--CCHH----HhhCCcEEE
Confidence            7899996 9999999999999985 589998886544321    111000011 2222222  1222    367899999


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEec
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iS  130 (307)
                      -+||.....  .....+.+..|..-.+.+++.+.+++-+.++.+-
T Consensus        75 itaG~~~~~--g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivv  117 (143)
T d1llda1          75 ITAGPRQKP--GQSRLELVGATVNILKAIMPNLVKVAPNAIYMLI  117 (143)
T ss_dssp             ECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred             EecccccCC--CCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEe
Confidence            999976542  3445688999999999999999888754444433

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.60  E-value=0.00017  Score=52.98  Aligned_cols=112  Identities=13%  Similarity=0.062  Sum_probs=72.6

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCc----ccccCCCCCCCceEEEEcccCChhHHHHHhcCccE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSS----HLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKG   83 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~----~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~   83 (307)
                      ..||.|+|+ |.+|+.++..|..+|. ++++.++++++...    .+................   |++    .++++|+
T Consensus        19 ~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~---d~~----~~~~adi   90 (159)
T d2ldxa1          19 RCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGK---DYN----VSANSKL   90 (159)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEES---SGG----GGTTEEE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEecc---chh----hhccccE
Confidence            458999996 9999999999999985 57999887654322    111111111102212222   322    4579999


Q ss_pred             EEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcE-EEEec
Q 021819           84 VFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRR-VVVTS  130 (307)
Q Consensus        84 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~iS  130 (307)
                      ||.+||......  ....+.++.|....+.+.+.+.+.+-+- ++.+|
T Consensus        91 vvitag~~~~~~--~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvt  136 (159)
T d2ldxa1          91 VIITAGARMVSG--QTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVT  136 (159)
T ss_dssp             EEECCSCCCCTT--TCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECS
T ss_pred             EEEecccccCCC--CCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeC
Confidence            999998765432  3445778899999999999888876443 44444

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.57  E-value=0.00015  Score=54.06  Aligned_cols=77  Identities=13%  Similarity=0.030  Sum_probs=53.7

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEccc--CChhHHHHHh-----c
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV--LDSGAVSRAV-----E   79 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~--~d~~~~~~~~-----~   79 (307)
                      +.+.+|+|+| +|.+|...++.+...|. +|+++++++.+.+.++++..    .. .+..|-  .+.++..+.+     .
T Consensus        25 ~~g~~vlV~G-~G~vG~~~~~~ak~~Ga-~vi~v~~~~~r~~~a~~~ga----~~-~~~~~~~~~~~~~~~~~~~~~~g~   97 (170)
T d1e3ja2          25 QLGTTVLVIG-AGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGA----DV-TLVVDPAKEEESSIIERIRSAIGD   97 (170)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTC----SE-EEECCTTTSCHHHHHHHHHHHSSS
T ss_pred             CCCCEEEEEc-ccccchhhHhhHhhhcc-cccccchHHHHHHHHHHcCC----cE-EEeccccccccchhhhhhhccccc
Confidence            3467999997 68999999999999999 89999998877776666521    11 222232  2333333333     2


Q ss_pred             CccEEEEeccC
Q 021819           80 GCKGVFHVASP   90 (307)
Q Consensus        80 ~~d~vi~~a~~   90 (307)
                      ++|+||.++|.
T Consensus        98 g~D~vid~~g~  108 (170)
T d1e3ja2          98 LPNVTIDCSGN  108 (170)
T ss_dssp             CCSEEEECSCC
T ss_pred             CCceeeecCCC
Confidence            58999999875

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.52  E-value=0.00033  Score=48.34  Aligned_cols=96  Identities=11%  Similarity=0.129  Sum_probs=64.4

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      +.++++|+|.|+ |-+|..-++.|++.|. +|+.++......  ...+....  ++.++..+..+.+     +.+++.|+
T Consensus         9 ~l~~k~vlVvG~-G~va~~ka~~ll~~ga-~v~v~~~~~~~~--~~~~~~~~--~i~~~~~~~~~~d-----l~~~~lv~   77 (113)
T d1pjqa1           9 QLRDRDCLIVGG-GDVAERKARLLLEAGA-RLTVNALTFIPQ--FTVWANEG--MLTLVEGPFDETL-----LDSCWLAI   77 (113)
T ss_dssp             CCBTCEEEEECC-SHHHHHHHHHHHHTTB-EEEEEESSCCHH--HHHHHTTT--SCEEEESSCCGGG-----GTTCSEEE
T ss_pred             EeCCCEEEEECC-CHHHHHHHHHHHHCCC-eEEEEeccCChH--HHHHHhcC--CceeeccCCCHHH-----hCCCcEEe
Confidence            678899999996 8899999999999999 888876543322  22211111  6777776664432     56788887


Q ss_pred             EeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           86 HVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        86 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      .+.+.        +         .-...+.+.|++.+  .+|++.+
T Consensus        78 ~at~d--------~---------~~n~~i~~~a~~~~--ilVNv~D  104 (113)
T d1pjqa1          78 AATDD--------D---------TVNQRVSDAAESRR--IFCNVVD  104 (113)
T ss_dssp             ECCSC--------H---------HHHHHHHHHHHHTT--CEEEETT
T ss_pred             ecCCC--------H---------HHHHHHHHHHHHcC--CEEEeCC
Confidence            66322        1         11346777888876  4788765

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.52  E-value=5.9e-05  Score=56.35  Aligned_cols=76  Identities=11%  Similarity=0.020  Sum_probs=55.2

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      .+.+|+|.|+ |.+|...++.+...|. +|+++++++.+.+..+++      ++..+.-...+.+..+....+.|.++.+
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~a~~l------Ga~~~i~~~~~~~~~~~~~~~~d~vi~~   98 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKM------GADHYIATLEEGDWGEKYFDTFDLIVVC   98 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHH------TCSEEEEGGGTSCHHHHSCSCEEEEEEC
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccc-cccccccchhHHHHhhcc------CCcEEeeccchHHHHHhhhcccceEEEE
Confidence            4679999986 9999999988888899 899999988877776665      3322211122334455566688999999


Q ss_pred             ccCC
Q 021819           88 ASPC   91 (307)
Q Consensus        88 a~~~   91 (307)
                      .+..
T Consensus        99 ~~~~  102 (168)
T d1piwa2          99 ASSL  102 (168)
T ss_dssp             CSCS
T ss_pred             ecCC
Confidence            7653

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.48  E-value=0.00033  Score=50.57  Aligned_cols=94  Identities=14%  Similarity=0.149  Sum_probs=54.3

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCC-C--CeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNN-Y--TSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g-~--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      |||.|.||||+.|+.|++.|++.. +  .++..+..+....+... ...    .... ..+..+.    +.++++|+||.
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~-~~~----~~~~-~~~~~~~----~~~~~~DvvF~   70 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPN-FGK----DAGM-LHDAFDI----ESLKQLDAVIT   70 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCC-SSS----CCCB-CEETTCH----HHHTTCSEEEE
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccc-cCC----ccee-eecccch----hhhccccEEEE
Confidence            479999999999999999988753 2  25555444322222111 110    1101 1122232    33578999999


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc-EEEEecC
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR-RVVVTSS  131 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~iSS  131 (307)
                      +.+-.                  -+..+...+.+.|.+ .+|=.||
T Consensus        71 alp~~------------------~s~~~~~~l~~~g~~~~VIDlSs   98 (147)
T d1mb4a1          71 CQGGS------------------YTEKVYPALRQAGWKGYWIDAAS   98 (147)
T ss_dssp             CSCHH------------------HHHHHHHHHHHTTCCSEEEESSS
T ss_pred             ecCch------------------HHHHHhHHHHHcCCceEEEeCCc
Confidence            86431                  144566777777754 4666665

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.42  E-value=0.00011  Score=53.98  Aligned_cols=74  Identities=18%  Similarity=0.282  Sum_probs=55.6

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCc-ccccCCCCCCCceEEEEcccCChhHHHHH-hcCccEEEEe
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS-HLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHV   87 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~d~vi~~   87 (307)
                      .+|+|.|. |-+|+.+++.|.++|. +|++++.++.... .......   .++.++.+|.+|++.++++ ++++|.||-+
T Consensus         4 nHiII~G~-g~~g~~l~~~L~~~~~-~v~vId~d~~~~~~~~~~~~~---~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~   78 (153)
T d1id1a_           4 DHFIVCGH-SILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLG---DNADVIPGDSNDSSVLKKAGIDRCRAILAL   78 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHC---TTCEEEESCTTSHHHHHHHTTTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCC-CEEEEeccchhHHHHHHHhhc---CCcEEEEccCcchHHHHHhccccCCEEEEc
Confidence            36899996 8999999999999999 8888887654321 1111111   1789999999999988775 5688999877


Q ss_pred             c
Q 021819           88 A   88 (307)
Q Consensus        88 a   88 (307)
                      .
T Consensus        79 ~   79 (153)
T d1id1a_          79 S   79 (153)
T ss_dssp             S
T ss_pred             c
Confidence            4

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.41  E-value=4.8e-05  Score=57.05  Aligned_cols=76  Identities=17%  Similarity=0.187  Sum_probs=44.4

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      |+||.|.||||++|..|++.|.+...-++..+..+...-+.+....+.   ..........+.+   +..+++|+|+-+.
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~---~~~~~~~~~~~~~---~~~~~~dvvf~a~   74 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPS---TLENSILSEFDPE---KVSKNCDVLFTAL   74 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGG---GCCCCBCBCCCHH---HHHHHCSEEEECC
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCch---hhccccccccCHh---HhccccceEEEcc
Confidence            569999999999999999999886544666665433333322211110   0000011122333   3456799999875


Q ss_pred             cC
Q 021819           89 SP   90 (307)
Q Consensus        89 ~~   90 (307)
                      +.
T Consensus        75 p~   76 (176)
T d1vkna1          75 PA   76 (176)
T ss_dssp             ST
T ss_pred             cc
Confidence            43

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.39  E-value=0.00068  Score=44.89  Aligned_cols=73  Identities=11%  Similarity=0.108  Sum_probs=49.6

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      ++++|+|+|.|. |--|..+++.|.++|+ +|++.+.+...... ..+..    ...+..+.. +.    ..++++|.||
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~-~v~~~D~~~~~~~~-~~~~~----~~~~~~~~~-~~----~~~~~~d~vi   69 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGV-TPRVMDTRMTPPGL-DKLPE----AVERHTGSL-ND----EWLMAADLIV   69 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTC-CCEEEESSSSCTTG-GGSCT----TSCEEESBC-CH----HHHHHCSEEE
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCC-EEEEeeCCcCchhH-HHHhh----ccceeeccc-ch----hhhccCCEEE
Confidence            467889999997 7789999999999999 89988875433211 11111    333444432 21    2356889999


Q ss_pred             EeccC
Q 021819           86 HVASP   90 (307)
Q Consensus        86 ~~a~~   90 (307)
                      -.-|+
T Consensus        70 ~SPGi   74 (93)
T d2jfga1          70 ASPGI   74 (93)
T ss_dssp             ECTTS
T ss_pred             ECCCC
Confidence            98776

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.38  E-value=3e-05  Score=57.10  Aligned_cols=106  Identities=17%  Similarity=0.040  Sum_probs=64.4

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCC------eEEEEeCCCCCC--ccccc-CCCCCCCceEEEEcccCChhHHHHHhcC
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYT------SINATVFPGSDS--SHLFA-LPGAGDANLRVFEADVLDSGAVSRAVEG   80 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~------~V~~~~r~~~~~--~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~~   80 (307)
                      +||.|+||+|.+|++++-.|.+.+..      ++...+.+....  +.+.. +..........+.  ..+  ...+.+++
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~--~~~~~~~~   79 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVI--ATD--KEEIAFKD   79 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEE--EES--CHHHHTTT
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccc--cCc--ccccccCC
Confidence            49999999999999999999876421      233333322211  11100 0000000111111  111  23466789


Q ss_pred             ccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhc
Q 021819           81 CKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRF  121 (307)
Q Consensus        81 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  121 (307)
                      +|+||-++|.....  .....+.++.|..-.+.+.+.+.++
T Consensus        80 ~dvVVitag~~~~~--g~sr~dll~~N~~i~k~~~~~i~k~  118 (154)
T d5mdha1          80 LDVAILVGSMPRRD--GMERKDLLKANVKIFKCQGAALDKY  118 (154)
T ss_dssp             CSEEEECCSCCCCT--TCCTTTTHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEecccCCCC--CCchhHHHHHhHHHHHHHHHHHHhh
Confidence            99999999876542  2334577899999999999998775

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.37  E-value=0.00053  Score=51.05  Aligned_cols=76  Identities=17%  Similarity=0.130  Sum_probs=55.2

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceE-EEEcccCChhHHHHHhc-----Cc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLR-VFEADVLDSGAVSRAVE-----GC   81 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~i~~D~~d~~~~~~~~~-----~~   81 (307)
                      .+.+|+|.|+ |.+|...+..+...|..+|++.++++.+.+..+++      ++. .+..+-.+..+..+.+.     ++
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~------Ga~~~~~~~~~~~~~~~~~~~~~~g~g~   98 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEI------GADLVLQISKESPQEIARKVEGQLGCKP   98 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT------TCSEEEECSSCCHHHHHHHHHHHHTSCC
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHh------CCcccccccccccccccccccccCCCCc
Confidence            4679999986 99999999999999987899999988777766665      332 23333344444444432     68


Q ss_pred             cEEEEeccC
Q 021819           82 KGVFHVASP   90 (307)
Q Consensus        82 d~vi~~a~~   90 (307)
                      |+||.++|.
T Consensus        99 Dvvid~~G~  107 (171)
T d1pl8a2          99 EVTIECTGA  107 (171)
T ss_dssp             SEEEECSCC
T ss_pred             eEEEeccCC
Confidence            999999875

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.36  E-value=0.00013  Score=54.40  Aligned_cols=75  Identities=12%  Similarity=0.090  Sum_probs=56.5

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      ..+.+|+|.|+ |.+|...++.+...|. +++++++++++.+.++++      +...+ .|..+.+......+++|++|.
T Consensus        29 ~~G~~VlI~Ga-G~vG~~a~qlak~~Ga-~~i~~~~~~~~~~~a~~l------Gad~~-i~~~~~~~~~~~~~~~D~vid   99 (168)
T d1uufa2          29 GPGKKVGVVGI-GGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKAL------GADEV-VNSRNADEMAAHLKSFDFILN   99 (168)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHH------TCSEE-EETTCHHHHHTTTTCEEEEEE
T ss_pred             CCCCEEEEecc-chHHHHHHHHhhcccc-cchhhccchhHHHHHhcc------CCcEE-EECchhhHHHHhcCCCceeee
Confidence            34679999986 8899999999988999 777888877766665555      22222 366666666666678999999


Q ss_pred             eccC
Q 021819           87 VASP   90 (307)
Q Consensus        87 ~a~~   90 (307)
                      ++|.
T Consensus       100 ~~g~  103 (168)
T d1uufa2         100 TVAA  103 (168)
T ss_dssp             CCSS
T ss_pred             eeec
Confidence            9875

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.36  E-value=5.4e-05  Score=56.92  Aligned_cols=75  Identities=12%  Similarity=-0.005  Sum_probs=52.2

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChh---HHHHHhc--Ccc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSG---AVSRAVE--GCK   82 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~---~~~~~~~--~~d   82 (307)
                      ++.+|+|.|+ |.+|...++.+...|..+|+++++++.+.+..+.+      +...+ .|..+.+   .+.+.-.  ++|
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~l------Ga~~~-i~~~~~~~~~~v~~~t~g~G~D   98 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFY------GATDI-LNYKNGHIEDQVMKLTNGKGVD   98 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHH------TCSEE-ECGGGSCHHHHHHHHTTTSCEE
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhh------Ccccc-ccccchhHHHHHHHHhhccCcc
Confidence            4678999985 99999999999988986799999877666655554      22211 2333332   2333332  589


Q ss_pred             EEEEeccC
Q 021819           83 GVFHVASP   90 (307)
Q Consensus        83 ~vi~~a~~   90 (307)
                      +||.++|.
T Consensus        99 ~vid~~g~  106 (174)
T d1jqba2          99 RVIMAGGG  106 (174)
T ss_dssp             EEEECSSC
T ss_pred             eEEEccCC
Confidence            99999875

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.36  E-value=3.6e-05  Score=57.39  Aligned_cols=65  Identities=17%  Similarity=0.128  Sum_probs=45.1

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      |||.|.| .|.+|+.+++.|.++|+ +|++++|+++..+.+++..     .+.... |  +    .+.++++|+||-+.
T Consensus         1 MkI~iIG-~G~mG~~lA~~l~~~g~-~V~~~d~~~~~~~~a~~~~-----~~~~~~-~--~----~~~~~~~DiIilav   65 (165)
T d2f1ka2           1 MKIGVVG-LGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQ-----LVDEAG-Q--D----LSLLQTAKIIFLCT   65 (165)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTT-----SCSEEE-S--C----GGGGTTCSEEEECS
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHhh-----ccceee-e--e----cccccccccccccC
Confidence            4788997 59999999999999999 9999999765544443321     011111 1  1    13568999998764

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.32  E-value=0.001  Score=45.52  Aligned_cols=68  Identities=18%  Similarity=0.146  Sum_probs=52.4

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc--CccEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE--GCKGVF   85 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~--~~d~vi   85 (307)
                      ...||.|.| +|.+|+-++....+-|+ ++++++.++.....  ..      .-..+.+|..|.+.+.++..  ++|+|.
T Consensus        10 ~~~kigIlG-gGQL~rMla~aA~~lG~-~v~v~d~~~~~PA~--~v------a~~~i~~~~~d~~~l~~~~~~~~~DviT   79 (111)
T d1kjqa2          10 AATRVMLLG-SGELGKEVAIECQRLGV-EVIAVDRYADAPAM--HV------AHRSHVINMLDGDALRRVVELEKPHYIV   79 (111)
T ss_dssp             TCCEEEEES-CSHHHHHHHHHHHTTTC-EEEEEESSTTCGGG--GG------SSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCCEEEEEe-CCHHHHHHHHHHHHCCC-EEEEEcCCCCCchh--hc------CCeEEECCCCCHHHHHHHHHhhCCceEE
Confidence            456899999 59999999999999999 89998876543211  11      22577899999999988875  568884

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.32  E-value=6.7e-05  Score=55.69  Aligned_cols=65  Identities=22%  Similarity=0.293  Sum_probs=48.6

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      |++|.|.| .|.+|+.+++.|+++|+ +|.+.+|++...+.+...      +..       ......++++.+|+|+-+.
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g~-~v~~~d~~~~~~~~~~~~------~~~-------~~~~~~e~~~~~diii~~v   65 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAA------GAS-------AARSARDAVQGADVVISML   65 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHT------TCE-------ECSSHHHHHTSCSEEEECC
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCCC-eEEEEECchhhhhhhhhh------hcc-------ccchhhhhccccCeeeecc
Confidence            56899998 69999999999999999 999999987665554432      111       1123456778889888874

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.32  E-value=3.1e-05  Score=57.83  Aligned_cols=44  Identities=30%  Similarity=0.313  Sum_probs=39.3

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFAL   53 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~   53 (307)
                      +..|||+||+|.+|...++.....|. +|+++.+++++.+.++++
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~~~~l   67 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQL   67 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHH
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCC-ceEEEecCHHHHHHHHhh
Confidence            44799999999999999999888899 999999998888877766

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.31  E-value=4.4e-05  Score=57.55  Aligned_cols=73  Identities=19%  Similarity=0.119  Sum_probs=51.4

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-CccEEEEec
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-GCKGVFHVA   88 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-~~d~vi~~a   88 (307)
                      .+|+|+||+|.+|...++.....|+ +|+++++++++.+.++.+      +...+ .|..+.+..+.+.+ ..|.+|++.
T Consensus        33 ~~vlV~gasGGVG~~aiQlAk~~Ga-~Via~~~~~~k~~~~~~l------Gad~v-i~~~~~~~~~~l~~~~~~~vvD~V  104 (177)
T d1o89a2          33 GEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSL------GASRV-LPRDEFAESRPLEKQVWAGAIDTV  104 (177)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHH------TEEEE-EEGGGSSSCCSSCCCCEEEEEESS
T ss_pred             CcEEEEEccccchHHHHHHHHHcCC-CeEEEecchhHHHHHHhh------ccccc-cccccHHHHHHHHhhcCCeeEEEc
Confidence            4899999999999999999999999 899999988887777665      44333 23322222222222 358888876


Q ss_pred             cC
Q 021819           89 SP   90 (307)
Q Consensus        89 ~~   90 (307)
                      +.
T Consensus       105 gg  106 (177)
T d1o89a2         105 GD  106 (177)
T ss_dssp             CH
T ss_pred             ch
Confidence            53

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.28  E-value=0.00013  Score=56.27  Aligned_cols=78  Identities=10%  Similarity=0.124  Sum_probs=48.1

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCC--CCCCce-EEE-----EcccCChhHHHHHhcCc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG--AGDANL-RVF-----EADVLDSGAVSRAVEGC   81 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~-~~i-----~~D~~d~~~~~~~~~~~   81 (307)
                      |||.|.| .|++|..++..|+++|+ +|++++.++...+.+..-..  ... .. +.+     ...+.-..+..++++++
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g~-~V~g~D~n~~~i~~ln~g~~p~~e~-~~~~~l~~~~~~~~~~~~~~~~~~i~~~   77 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARGH-EVIGVDVSSTKIDLINQGKSPIVEP-GLEALLQQGRQTGRLSGTTDFKKAVLDS   77 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTCCSSCCT-THHHHHHHHHHTTCEEEESCHHHHHHTC
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCCC-cEEEEeCCHHHHHHhcccCCcccch-hhhhhhhhhhcccccccCCCHHHHHhhC
Confidence            4788996 79999999999999999 99999986544333322100  000 00 000     00011112355667789


Q ss_pred             cEEEEeccC
Q 021819           82 KGVFHVASP   90 (307)
Q Consensus        82 d~vi~~a~~   90 (307)
                      |+++-|.+.
T Consensus        78 d~i~i~VpT   86 (202)
T d1mv8a2          78 DVSFICVGT   86 (202)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEEecCc
Confidence            999999875

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.28  E-value=9.3e-05  Score=55.29  Aligned_cols=75  Identities=16%  Similarity=0.138  Sum_probs=53.9

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCce-EEEEcccCChhHHHHHh-----cCc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANL-RVFEADVLDSGAVSRAV-----EGC   81 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~i~~D~~d~~~~~~~~-----~~~   81 (307)
                      .+.+|+|+|++|.+|...++.+...|...|++.++++.+.+.++++      +. ..+  |..+++..++..     .++
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~------Ga~~~i--~~~~~~~~~~~~~~~~~~~~   98 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA------GADYVI--NASMQDPLAEIRRITESKGV   98 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH------TCSEEE--ETTTSCHHHHHHHHTTTSCE
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHc------CCceee--ccCCcCHHHHHHHHhhcccc
Confidence            4679999999999999999999988876899999887766666554      22 223  333433333333     258


Q ss_pred             cEEEEeccC
Q 021819           82 KGVFHVASP   90 (307)
Q Consensus        82 d~vi~~a~~   90 (307)
                      |++|.+++.
T Consensus        99 d~vid~~g~  107 (170)
T d1jvba2          99 DAVIDLNNS  107 (170)
T ss_dssp             EEEEESCCC
T ss_pred             hhhhccccc
Confidence            999999875

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.22  E-value=0.0003  Score=53.06  Aligned_cols=76  Identities=11%  Similarity=0.043  Sum_probs=52.4

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCce-EEEEcccCChhHH----HHHh--cC
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANL-RVFEADVLDSGAV----SRAV--EG   80 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~i~~D~~d~~~~----~~~~--~~   80 (307)
                      .+.+|+|+|+ |.+|...++.+...|..+|+++++++.+.+.++++      +. ..+...=.+..+.    .+..  .+
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~l------Ga~~vi~~~~~~~~~~~~~i~~~~~~~g  100 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI------GADLTLNRRETSVEERRKAIMDITHGRG  100 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT------TCSEEEETTTSCHHHHHHHHHHHTTTSC
T ss_pred             CCCEEEEECC-Cccchhheecccccccccccccccccccccccccc------cceEEEeccccchHHHHHHHHHhhCCCC
Confidence            4679999996 89999999999999986799999988777666665      22 2222211222222    2222  25


Q ss_pred             ccEEEEeccC
Q 021819           81 CKGVFHVASP   90 (307)
Q Consensus        81 ~d~vi~~a~~   90 (307)
                      +|+||.++|.
T Consensus       101 ~Dvvid~vG~  110 (182)
T d1vj0a2         101 ADFILEATGD  110 (182)
T ss_dssp             EEEEEECSSC
T ss_pred             ceEEeecCCc
Confidence            8999999875

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.18  E-value=0.00052  Score=49.54  Aligned_cols=92  Identities=21%  Similarity=0.159  Sum_probs=53.5

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCC--CCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNN--YTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g--~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      ++|.|.||||++|+.|++.|.+.+  ..++..+..+...-+.....      .-.....++.+     ..++++|++|-+
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~------~~~~~~~~~~~-----~~~~~~d~vf~a   71 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFA------ESSLRVGDVDS-----FDFSSVGLAFFA   71 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEET------TEEEECEEGGG-----CCGGGCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeec------cccchhccchh-----hhhccceEEEec
Confidence            589999999999999999997654  34666655443332222211      11111112211     234678999877


Q ss_pred             ccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           88 ASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        88 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      ++.                  ..+..+...+.+.|. ++|-.||
T Consensus        72 ~p~------------------~~s~~~~~~~~~~g~-~VID~Ss   96 (144)
T d2hjsa1          72 AAA------------------EVSRAHAERARAAGC-SVIDLSG   96 (144)
T ss_dssp             SCH------------------HHHHHHHHHHHHTTC-EEEETTC
T ss_pred             CCc------------------chhhhhccccccCCc-eEEeech
Confidence            543                  113445555666663 6777776

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.18  E-value=2.5e-05  Score=59.18  Aligned_cols=32  Identities=25%  Similarity=0.311  Sum_probs=26.7

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINAT   40 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~   40 (307)
                      |+||.|.||||+.|..|++.|.....-++..+
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l   32 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITAL   32 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEee
Confidence            57999999999999999999998754366544

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.16  E-value=0.00012  Score=54.28  Aligned_cols=65  Identities=18%  Similarity=0.264  Sum_probs=48.9

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEecc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a~   89 (307)
                      |||-|.| .|.+|+.+++.|+++|+ +|++.+|++++.+.+...      +...    .   ++..++++++|+||-|..
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~------~~~~----~---~~~~e~~~~~d~ii~~v~   65 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAA------GAET----A---STAKAIAEQCDVIITMLP   65 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT------TCEE----C---SSHHHHHHHCSEEEECCS
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHh------hhhh----c---ccHHHHHhCCCeEEEEcC
Confidence            4789998 69999999999999999 999999987766555443      2221    1   234566788999998853

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.11  E-value=0.00047  Score=51.58  Aligned_cols=77  Identities=14%  Similarity=0.058  Sum_probs=52.8

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEE--cccCC-hhHHHHHh--cCc
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFE--ADVLD-SGAVSRAV--EGC   81 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~--~D~~d-~~~~~~~~--~~~   81 (307)
                      +++.+|+|.|+ |++|...+..+...|..+|+++++++.+.+..+++.      .....  .|-.+ .+...+..  .++
T Consensus        27 k~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~G------a~~~i~~~~~~~~~~~~~~~~~~~G~   99 (176)
T d2jhfa2          27 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVG------ATECVNPQDYKKPIQEVLTEMSNGGV   99 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTT------CSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred             CCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhC------CeeEEecCCchhHHHHHHHHHhcCCC
Confidence            35679999998 669999999999998769999999888877766652      22221  22222 12222222  268


Q ss_pred             cEEEEeccC
Q 021819           82 KGVFHVASP   90 (307)
Q Consensus        82 d~vi~~a~~   90 (307)
                      |++|.+.|.
T Consensus       100 D~vid~~G~  108 (176)
T d2jhfa2         100 DFSFEVIGR  108 (176)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEecCCc
Confidence            999999776

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.09  E-value=0.00026  Score=53.28  Aligned_cols=77  Identities=18%  Similarity=0.085  Sum_probs=50.2

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCC---CCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG---AGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      |+|.|.|+ |.+|..++..|.++|+ +|.+++|+++..+.......   ... .............+..+.++++|+||-
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~~~~aD~iii   78 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGP-GLAGTAHPDLLTSDIGLAVKDADVILI   78 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEEEESS-SCCEEECCSEEESCHHHHHTTCSEEEE
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCCchhhh-hhhhhhhhhhhhhhhHhHhcCCCEEEE
Confidence            69999996 9999999999999999 99999997655443322100   000 111111111111236678899999999


Q ss_pred             ecc
Q 021819           87 VAS   89 (307)
Q Consensus        87 ~a~   89 (307)
                      +..
T Consensus        79 ~v~   81 (184)
T d1bg6a2          79 VVP   81 (184)
T ss_dssp             CSC
T ss_pred             EEc
Confidence            743

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.08  E-value=0.00055  Score=49.91  Aligned_cols=65  Identities=18%  Similarity=0.120  Sum_probs=45.3

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEecc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVAS   89 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a~   89 (307)
                      |||-|.| .|.+|+.+++.|+++|+ +|+..+++++........      ++.     +.  ++..++++++|+||-+..
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~------~~~-----~~--~~~~e~~~~~diIi~~v~   65 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGV-EVVTSLEGRSPSTIERAR------TVG-----VT--ETSEEDVYSCPVVISAVT   65 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTC-EEEECCTTCCHHHHHHHH------HHT-----CE--ECCHHHHHTSSEEEECSC
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCC-eEEEEcCchhHHHHHhhh------ccc-----cc--ccHHHHHhhcCeEEEEec
Confidence            3788887 69999999999999999 888887765544332211      111     11  123456789999998853

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.07  E-value=0.00016  Score=53.81  Aligned_cols=69  Identities=14%  Similarity=0.159  Sum_probs=48.9

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      ++++|+|.|+ |+.|++++..|.+.|..+|..+.|+.++.+.+....     +...+. +. +       ..++|+|||+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~-----~~~~~~-~~-~-------~~~~DliINa   80 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY-----GYAYIN-SL-E-------NQQADILVNV   80 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH-----TCEEES-CC-T-------TCCCSEEEEC
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh-----hhhhhh-cc-c-------ccchhhheec
Confidence            4678999996 999999999999999878999999877665554321     122221 11 1       1468999998


Q ss_pred             ccCC
Q 021819           88 ASPC   91 (307)
Q Consensus        88 a~~~   91 (307)
                      ....
T Consensus        81 TpiG   84 (167)
T d1npya1          81 TSIG   84 (167)
T ss_dssp             SSTT
T ss_pred             cccC
Confidence            7643

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.04  E-value=0.00024  Score=53.19  Aligned_cols=74  Identities=15%  Similarity=0.069  Sum_probs=51.4

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCce-EEEEcccCChhHHHHHh---c-Ccc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANL-RVFEADVLDSGAVSRAV---E-GCK   82 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~i~~D~~d~~~~~~~~---~-~~d   82 (307)
                      .+.+|+|.|+ |.+|...++.+...|...|++.++++.+.+.++++      +. +++  |..+++..+++.   . ++|
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~------Ga~~~i--~~~~~~~~~~i~~~t~gg~D   98 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL------GATHVI--NSKTQDPVAAIKEITDGGVN   98 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH------TCSEEE--ETTTSCHHHHHHHHTTSCEE
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHc------CCeEEE--eCCCcCHHHHHHHHcCCCCc
Confidence            4679999997 99999999999888986777777777666666555      22 233  444443333322   2 589


Q ss_pred             EEEEeccC
Q 021819           83 GVFHVASP   90 (307)
Q Consensus        83 ~vi~~a~~   90 (307)
                      +||.+.|.
T Consensus        99 ~vid~~G~  106 (174)
T d1f8fa2          99 FALESTGS  106 (174)
T ss_dssp             EEEECSCC
T ss_pred             EEEEcCCc
Confidence            99999775

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.01  E-value=0.00031  Score=52.33  Aligned_cols=75  Identities=13%  Similarity=0.115  Sum_probs=50.7

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      .++|+|+|.|+ |+.+++++..|.+.|. +|+.+.|+.++.+.+........ .+..+  +..+   .  ....+|+|||
T Consensus        16 ~~~k~vlIlGa-GGaarai~~al~~~g~-~i~I~nRt~~ka~~l~~~~~~~~-~~~~~--~~~~---~--~~~~~dliIN   85 (170)
T d1nyta1          16 RPGLRILLIGA-GGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTG-SIQAL--SMDE---L--EGHEFDLIIN   85 (170)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGS-SEEEC--CSGG---G--TTCCCSEEEE
T ss_pred             CCCCEEEEECC-cHHHHHHHHHhcccce-EEEeccchHHHHHHHHHHHhhcc-ccccc--cccc---c--cccccceeec
Confidence            45789999996 8899999999999999 89999998766555433221111 22222  2211   1  1257899999


Q ss_pred             eccCC
Q 021819           87 VASPC   91 (307)
Q Consensus        87 ~a~~~   91 (307)
                      +....
T Consensus        86 ~Tp~G   90 (170)
T d1nyta1          86 ATSSG   90 (170)
T ss_dssp             CCSCG
T ss_pred             ccccC
Confidence            97653

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=96.99  E-value=0.00035  Score=49.45  Aligned_cols=68  Identities=12%  Similarity=0.093  Sum_probs=52.5

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHH-hcCccEEEEe
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA-VEGCKGVFHV   87 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~-~~~~d~vi~~   87 (307)
                      |.|+|.|. |-+|+.+++.|  ++. .|++++.++...+.+...      ++.++.+|.++++.++++ +++++.++-+
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~-~i~vi~~d~~~~~~~~~~------~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~   69 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGS-EVFVLAEDENVRKKVLRS------GANFVHGDPTRVSDLEKANVRGARAVIVN   69 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGG-GEEEEESCTTHHHHHHHT------TCEEEESCTTSHHHHHHTTCTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCC-CCEEEEcchHHHHHHHhc------CccccccccCCHHHHHHhhhhcCcEEEEe
Confidence            46889985 88899999998  455 677777766655544433      788999999999988875 5688888875

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.98  E-value=0.00043  Score=51.71  Aligned_cols=76  Identities=11%  Similarity=0.029  Sum_probs=51.6

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccC-ChhHHHHHh-----cC
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL-DSGAVSRAV-----EG   80 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~-d~~~~~~~~-----~~   80 (307)
                      +.+.+|+|.|+ |++|...++.+...|...|+++++++.+.+..+++      +...+. |.. +.+.+.+.+     .+
T Consensus        27 ~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~l------Ga~~~i-~~~~~~~~~~~~~~~~~~~g   98 (176)
T d2fzwa2          27 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF------GATECI-NPQDFSKPIQEVLIEMTDGG   98 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH------TCSEEE-CGGGCSSCHHHHHHHHTTSC
T ss_pred             CCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHh------CCcEEE-eCCchhhHHHHHHHHHcCCC
Confidence            35679999997 57899999999889986888888877777666665      222221 221 222233322     36


Q ss_pred             ccEEEEeccC
Q 021819           81 CKGVFHVASP   90 (307)
Q Consensus        81 ~d~vi~~a~~   90 (307)
                      +|+||.+.|.
T Consensus        99 ~D~vid~~G~  108 (176)
T d2fzwa2          99 VDYSFECIGN  108 (176)
T ss_dssp             BSEEEECSCC
T ss_pred             CcEeeecCCC
Confidence            8999999775

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.97  E-value=0.00017  Score=53.74  Aligned_cols=43  Identities=21%  Similarity=0.301  Sum_probs=34.9

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCCCCccccc
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGSDSSHLFA   52 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~   52 (307)
                      ||+|+|.| .|.||..+++.|.+.|+ .+|++.+++++..+.++.
T Consensus         1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~   44 (171)
T d2g5ca2           1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD   44 (171)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHH
Confidence            57899998 69999999999999986 379999987665555444

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=96.88  E-value=0.00017  Score=54.54  Aligned_cols=35  Identities=29%  Similarity=0.434  Sum_probs=28.1

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeC
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF   42 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r   42 (307)
                      ++.||.|.||||+.|..|++.|.+..+.++..+..
T Consensus         4 ~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S   38 (183)
T d2cvoa1           4 EEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTA   38 (183)
T ss_dssp             SCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEEC
T ss_pred             CccEEEEECcccHHHHHHHHHHHhCCCceEEEEec
Confidence            35689999999999999999998875546665543

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.87  E-value=0.001  Score=49.65  Aligned_cols=76  Identities=20%  Similarity=0.147  Sum_probs=52.4

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceE-EEEcccCCh--hHHHHHh--cCcc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLR-VFEADVLDS--GAVSRAV--EGCK   82 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~i~~D~~d~--~~~~~~~--~~~d   82 (307)
                      .+.+|+|.| +|.||...++.+...|...|++.++++.+.+..+++      +.. .+...-.|.  ....+..  .++|
T Consensus        28 ~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~------Ga~~~i~~~~~~~~~~~~~~~~~~~G~d  100 (174)
T d1e3ia2          28 PGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL------GATDCLNPRELDKPVQDVITELTAGGVD  100 (174)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT------TCSEEECGGGCSSCHHHHHHHHHTSCBS
T ss_pred             CCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHh------CCCcccCCccchhhhhhhHhhhhcCCCc
Confidence            467999997 599999999999999987888888888777666665      222 222211121  2222222  3789


Q ss_pred             EEEEeccC
Q 021819           83 GVFHVASP   90 (307)
Q Consensus        83 ~vi~~a~~   90 (307)
                      ++|.|+|.
T Consensus       101 ~vie~~G~  108 (174)
T d1e3ia2         101 YSLDCAGT  108 (174)
T ss_dssp             EEEESSCC
T ss_pred             EEEEeccc
Confidence            99999875

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.82  E-value=0.0007  Score=51.17  Aligned_cols=74  Identities=15%  Similarity=0.109  Sum_probs=48.2

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-cCCCCCCCceEEEEcccCChhH---HHHHh-cCccEE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-ALPGAGDANLRVFEADVLDSGA---VSRAV-EGCKGV   84 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~i~~D~~d~~~---~~~~~-~~~d~v   84 (307)
                      .+|||+||+|.+|+..++.....|...|++.++++++...+. .+      +...+ .|..+++.   +++.. +++|+|
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~------gad~v-i~~~~~~~~~~~~~~~~~GvDvv  104 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL------GFDAA-VNYKTGNVAEQLREACPGGVDVY  104 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS------CCSEE-EETTSSCHHHHHHHHCTTCEEEE
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc------cceEE-eeccchhHHHHHHHHhccCceEE
Confidence            689999999999999999998899855666666544444333 23      22222 34444332   22222 268999


Q ss_pred             EEeccC
Q 021819           85 FHVASP   90 (307)
Q Consensus        85 i~~a~~   90 (307)
                      +.+.|.
T Consensus       105 ~D~vGg  110 (187)
T d1vj1a2         105 FDNVGG  110 (187)
T ss_dssp             EESSCH
T ss_pred             EecCCc
Confidence            999764

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.78  E-value=0.001  Score=49.74  Aligned_cols=76  Identities=16%  Similarity=0.089  Sum_probs=54.4

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCC----hhHHHHHh--cC
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLD----SGAVSRAV--EG   80 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d----~~~~~~~~--~~   80 (307)
                      +.+.+|+|+|+ |.+|...++.+...|..+|+++++++++.+..+++      +...+. |..+    .+.+.+..  .+
T Consensus        28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~------GA~~~i-n~~~~~~~~~~~~~~~~g~G   99 (176)
T d1d1ta2          28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAV------GATECI-SPKDSTKPISEVLSEMTGNN   99 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHH------TCSEEE-CGGGCSSCHHHHHHHHHTSC
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhc------CCcEEE-CccccchHHHHHHHHhcccc
Confidence            35679999985 99999999999999976899999998888777666      222221 2222    22233322  37


Q ss_pred             ccEEEEeccC
Q 021819           81 CKGVFHVASP   90 (307)
Q Consensus        81 ~d~vi~~a~~   90 (307)
                      +|++|.+.+.
T Consensus       100 ~d~vi~~~g~  109 (176)
T d1d1ta2         100 VGYTFEVIGH  109 (176)
T ss_dssp             CCEEEECSCC
T ss_pred             ceEEEEeCCc
Confidence            8999999775

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.77  E-value=0.00046  Score=51.44  Aligned_cols=75  Identities=17%  Similarity=0.130  Sum_probs=50.4

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      .++++|+|.|+ |+.+++++..|.+.+. +|+.+.|+.++.+.+........ ++..+..|-.       .+..+|+|||
T Consensus        16 ~~~k~vlIlGa-GGaarai~~aL~~~~~-~i~I~nR~~~~a~~l~~~~~~~~-~~~~~~~~~~-------~~~~~diiIN   85 (171)
T d1p77a1          16 RPNQHVLILGA-GGATKGVLLPLLQAQQ-NIVLANRTFSKTKELAERFQPYG-NIQAVSMDSI-------PLQTYDLVIN   85 (171)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGS-CEEEEEGGGC-------CCSCCSEEEE
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHcccCc-eeeeccchHHHHHHHHHHHhhcc-ccchhhhccc-------cccccceeee
Confidence            46789999995 8889999999998665 99999998766554433211111 3444443311       2468999999


Q ss_pred             eccCC
Q 021819           87 VASPC   91 (307)
Q Consensus        87 ~a~~~   91 (307)
                      +....
T Consensus        86 ~tp~g   90 (171)
T d1p77a1          86 ATSAG   90 (171)
T ss_dssp             CCCC-
T ss_pred             ccccc
Confidence            97654

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.76  E-value=0.00029  Score=51.47  Aligned_cols=65  Identities=11%  Similarity=0.016  Sum_probs=46.5

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      |||.|.| +|-+|+++++.|++.|+ +|++..|+.++.+.+.+..     ++.     ..  .+..++++++|+||-+.
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~~~-~i~v~~r~~~~~~~l~~~~-----g~~-----~~--~~~~~~~~~~dvIilav   65 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQTPH-ELIISGSSLERSKEIAEQL-----ALP-----YA--MSHQDLIDQVDLVILGI   65 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSSC-EEEEECSSHHHHHHHHHHH-----TCC-----BC--SSHHHHHHTCSEEEECS
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhCCC-eEEEEcChHHhHHhhcccc-----cee-----ee--chhhhhhhccceeeeec
Confidence            4788887 79999999999999998 9999988766555443211     111     11  13456678999999874

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=96.73  E-value=0.00014  Score=55.40  Aligned_cols=78  Identities=14%  Similarity=0.110  Sum_probs=50.0

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCC--CCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPG--AGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      .|+||.|.|+ |..|++++..|.++|+ +|....|+++..+.+.....  ..-+++. +.-++.-..+++++++++|+||
T Consensus         6 ~m~KI~ViGa-G~wGtAlA~~La~~g~-~V~l~~r~~~~~~~i~~~~~n~~yl~~~~-l~~~i~~t~~l~~a~~~ad~ii   82 (189)
T d1n1ea2           6 YLNKAVVFGS-GAFGTALAMVLSKKCR-EVCVWHMNEEEVRLVNEKRENVLFLKGVQ-LASNITFTSDVEKAYNGAEIIL   82 (189)
T ss_dssp             CEEEEEEECC-SHHHHHHHHHHHTTEE-EEEEECSCHHHHHHHHHHTBCTTTSTTCB-CCTTEEEESCHHHHHTTCSCEE
T ss_pred             eeceEEEECC-CHHHHHHHHHHHHcCC-eEEEEEecHHHHHHHhhcccccccccccc-cccccccchhhhhccCCCCEEE
Confidence            3678999995 9999999999999999 99999987554433221100  0000111 0112211235778889999998


Q ss_pred             Eec
Q 021819           86 HVA   88 (307)
Q Consensus        86 ~~a   88 (307)
                      -+.
T Consensus        83 iav   85 (189)
T d1n1ea2          83 FVI   85 (189)
T ss_dssp             ECS
T ss_pred             EcC
Confidence            874

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.71  E-value=0.0012  Score=49.13  Aligned_cols=76  Identities=14%  Similarity=0.004  Sum_probs=53.7

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccC--C--hhHHHHHh--cC
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVL--D--SGAVSRAV--EG   80 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~--d--~~~~~~~~--~~   80 (307)
                      +.+.+|+|.|+ |.+|...++.+...|..+|+++++++.+.+..+.+      +...+ .|..  |  .+......  .+
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~l------Ga~~~-i~~~~~d~~~~~~~~~~~~~G   97 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIEL------GATEC-LNPKDYDKPIYEVICEKTNGG   97 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHT------TCSEE-ECGGGCSSCHHHHHHHHTTSC
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHHc------CCcEE-EcCCCchhHHHHHHHHhcCCC
Confidence            34679999985 99999999999999987899999988887777766      33322 1222  2  12222222  26


Q ss_pred             ccEEEEeccC
Q 021819           81 CKGVFHVASP   90 (307)
Q Consensus        81 ~d~vi~~a~~   90 (307)
                      .|++|.+++.
T Consensus        98 ~d~vid~~g~  107 (174)
T d1p0fa2          98 VDYAVECAGR  107 (174)
T ss_dssp             BSEEEECSCC
T ss_pred             CcEEEEcCCC
Confidence            8999999775

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.71  E-value=0.00047  Score=51.87  Aligned_cols=78  Identities=17%  Similarity=0.144  Sum_probs=48.8

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC--CcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD--SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      |+|.|.|+ |..|.+|+..|.++|+ +|....|..++  .+.+........-.......++.-.+++.++++++|+||.+
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~-~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~a   78 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGN-EVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLG   78 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCC-EEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC-EEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhcc
Confidence            48999995 9999999999999999 99998874322  11111110000001111112233346688889999999987


Q ss_pred             cc
Q 021819           88 AS   89 (307)
Q Consensus        88 a~   89 (307)
                      ..
T Consensus        79 vp   80 (180)
T d1txga2          79 VS   80 (180)
T ss_dssp             SC
T ss_pred             cc
Confidence            53

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=96.69  E-value=0.00078  Score=49.55  Aligned_cols=93  Identities=26%  Similarity=0.369  Sum_probs=55.7

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHC-CCCeEEEE-eCCCCCC--cccccCCCCCCCceEEEEcccCChhHHHHHhcCccEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDN-NYTSINAT-VFPGSDS--SHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~-g~~~V~~~-~r~~~~~--~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~v   84 (307)
                      ..||.|.|++|-+|+.|++.+.+. +. ++++. +|.....  ..+..+.....       .++.-.+++..+++.+|+|
T Consensus         4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~-~lv~~~~~~~~~~~g~d~~~~~~~~~-------~~~~~~~~~~~~~~~~DVi   75 (162)
T d1diha1           4 NIRVAIAGAGGRMGRQLIQAALALEGV-QLGAALEREGSSLLGSDAGELAGAGK-------TGVTVQSSLDAVKDDFDVF   75 (162)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTE-ECCCEECCTTCTTCSCCTTCSSSSSC-------CSCCEESCSTTTTTSCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEecccchhccchhhhhhcccc-------CCceeeccHHHHhcccceE
Confidence            459999999999999999999887 55 55443 4432221  11111111111       1111112234466789999


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEE
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVV  128 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~  128 (307)
                      |.+...                  .++...++.|.++++ .+|.
T Consensus        76 IDFs~p------------------~~~~~~~~~a~~~~~-~~Vi  100 (162)
T d1diha1          76 IDFTRP------------------EGTLNHLAFCRQHGK-GMVI  100 (162)
T ss_dssp             EECSCH------------------HHHHHHHHHHHHTTC-EEEE
T ss_pred             EEeccH------------------HHHHHHHHHHHhccc-eeEE
Confidence            998432                  245678889999985 4554

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.63  E-value=0.0028  Score=47.38  Aligned_cols=63  Identities=17%  Similarity=0.141  Sum_probs=48.8

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      ..++++.|.| .|-||+.+++.|..-|. +|++.+|.+.+...                   .-.++++++++.+|+|+.
T Consensus        40 l~gk~vgIiG-~G~IG~~va~~l~~~g~-~v~~~d~~~~~~~~-------------------~~~~~l~ell~~sDiv~~   98 (181)
T d1qp8a1          40 IQGEKVAVLG-LGEIGTRVGKILAALGA-QVRGFSRTPKEGPW-------------------RFTNSLEEALREARAAVC   98 (181)
T ss_dssp             CTTCEEEEES-CSTHHHHHHHHHHHTTC-EEEEECSSCCCSSS-------------------CCBSCSHHHHTTCSEEEE
T ss_pred             ccCceEEEec-cccccccceeeeecccc-ccccccccccccce-------------------eeeechhhhhhccchhhc
Confidence            5688999999 58999999999999999 99999886543211                   011246788999999998


Q ss_pred             eccC
Q 021819           87 VASP   90 (307)
Q Consensus        87 ~a~~   90 (307)
                      +...
T Consensus        99 ~~pl  102 (181)
T d1qp8a1          99 ALPL  102 (181)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            7654

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.54  E-value=0.011  Score=41.34  Aligned_cols=88  Identities=15%  Similarity=0.187  Sum_probs=58.7

Q ss_pred             CCcEEEEeCCc---hhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEE
Q 021819            8 EEETVCVTGAN---GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (307)
Q Consensus         8 ~~~~ilItGat---G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~v   84 (307)
                      +-++|.|.|||   +..|..+.+.|.+.|..+|+.+..+...   ..        +...+ -++.      ++-..+|.+
T Consensus         7 ~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~---i~--------G~~~y-~sl~------dlp~~vDlv   68 (129)
T d2csua1           7 NPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEE---VQ--------GVKAY-KSVK------DIPDEIDLA   68 (129)
T ss_dssp             SCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSE---ET--------TEECB-SSTT------SCSSCCSEE
T ss_pred             CCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccc---cC--------CeEee-cchh------hcCCCCceE
Confidence            46799999998   9999999999977663488887543211   11        22222 2332      233468888


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      +-+...                  ..+..+++.|.+.|++.++.+|+
T Consensus        69 vi~vp~------------------~~~~~~~~~~~~~g~~~~vi~s~   97 (129)
T d2csua1          69 IIVVPK------------------RFVKDTLIQCGEKGVKGVVIITA   97 (129)
T ss_dssp             EECSCH------------------HHHHHHHHHHHHHTCCEEEECCC
T ss_pred             EEecCh------------------HHhHHHHHHHHHcCCCEEEEecc
Confidence            876432                  12556788899999998888886

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.53  E-value=0.0021  Score=47.85  Aligned_cols=73  Identities=11%  Similarity=0.180  Sum_probs=53.7

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      +.+|-|.| .|.+|+.+++.|+++|+ +|++.+|++++.+.+........ ..    .-....+++.+.+..+|.++-+.
T Consensus         2 ~~nIg~IG-lG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~~-~~----~~a~~~~~~~~~~~~~~~ii~~~   74 (176)
T d2pgda2           2 QADIALIG-LAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANEAKGT-KV----LGAHSLEEMVSKLKKPRRIILLV   74 (176)
T ss_dssp             CBSEEEEC-CSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTTTTTS-SC----EECSSHHHHHHHBCSSCEEEECS
T ss_pred             CCcEEEEe-EhHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHhccccc-cc----cchhhhhhhhhhhcccceEEEec
Confidence            35799999 59999999999999999 99999998877665543321110 11    11345677888888999998874

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.50  E-value=0.0035  Score=43.95  Aligned_cols=69  Identities=14%  Similarity=0.162  Sum_probs=46.6

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEE-eCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-----CccE
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINAT-VFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----GCKG   83 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----~~d~   83 (307)
                      |||.|.|++|-+|+.|++.+.++++ ++++. +++..  +.   +.     +.. +..|.+.++.+.+.++     ++..
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~-~l~~~id~~~~--~~---~~-----~~D-VvIDFS~p~~~~~~l~~~~~~~~p~   68 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGH-ELVLKVDVNGV--EE---LD-----SPD-VVIDFSSPEALPKTVDLCKKYRAGL   68 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEETTEE--EE---CS-----CCS-EEEECSCGGGHHHHHHHHHHHTCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCC-eEEEEECCCcH--HH---hc-----cCC-EEEEecCHHHHHHHHHHHHhcCCCE
Confidence            4799999999999999999989998 55543 33211  11   11     122 2369999988877765     5566


Q ss_pred             EEEeccC
Q 021819           84 VFHVASP   90 (307)
Q Consensus        84 vi~~a~~   90 (307)
                      |+=..|.
T Consensus        69 ViGTTG~   75 (128)
T d1vm6a3          69 VLGTTAL   75 (128)
T ss_dssp             EECCCSC
T ss_pred             EEEcCCC
Confidence            6655443

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.41  E-value=0.001  Score=48.71  Aligned_cols=76  Identities=17%  Similarity=0.136  Sum_probs=58.7

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      .-+|+|.|+ |-.|.+-++....-|. +|.+++.+.+..+.++.....   .++..   ..+.+.+.+.++++|+||.++
T Consensus        32 pa~V~ViGa-GvaG~~A~~~A~~lGA-~V~~~D~~~~~l~~l~~~~~~---~~~~~---~~~~~~l~~~~~~aDivI~aa  103 (168)
T d1pjca1          32 PGKVVILGG-GVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGS---RVELL---YSNSAEIETAVAEADLLIGAV  103 (168)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGG---GSEEE---ECCHHHHHHHHHTCSEEEECC
T ss_pred             CcEEEEECC-ChHHHHHHHHHhhCCC-EEEEEeCcHHHHHHHHHhhcc---cceee---hhhhhhHHHhhccCcEEEEee
Confidence            459999996 9999999999999999 999999987766655443211   23322   356778999999999999998


Q ss_pred             cCCC
Q 021819           89 SPCT   92 (307)
Q Consensus        89 ~~~~   92 (307)
                      -...
T Consensus       104 lipG  107 (168)
T d1pjca1         104 LVPG  107 (168)
T ss_dssp             CCTT
T ss_pred             ecCC
Confidence            7643

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.37  E-value=0.0046  Score=44.86  Aligned_cols=32  Identities=31%  Similarity=0.452  Sum_probs=24.8

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCC--CeEEEEe
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNY--TSINATV   41 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~--~~V~~~~   41 (307)
                      -||.|.||||++|..|++.|.+..+  .++..+.
T Consensus         2 ~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~   35 (154)
T d2gz1a1           2 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLA   35 (154)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHcCCCCceEEEEec
Confidence            3799999999999999998877743  3444443

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.29  E-value=0.0031  Score=46.70  Aligned_cols=77  Identities=16%  Similarity=0.059  Sum_probs=50.4

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHh--cCccEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV--EGCKGVF   85 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~--~~~d~vi   85 (307)
                      .+.+|+|.|+ |.+|...++.+...|...|++.++++.+.+.++.+.     ..+.+..+=.+.+...+..  .++|+||
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~g-----a~~~i~~~~~~~~~~~~~~~~~g~d~vi  105 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLG-----ADHVVDARRDPVKQVMELTRGRGVNVAM  105 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTT-----CSEEEETTSCHHHHHHHHTTTCCEEEEE
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcc-----cceeecCcccHHHHHHHhhCCCCceEEE
Confidence            4678999985 999999999998888767888888776666665542     1123322211122222222  2589999


Q ss_pred             EeccC
Q 021819           86 HVASP   90 (307)
Q Consensus        86 ~~a~~   90 (307)
                      .++|.
T Consensus       106 d~~g~  110 (172)
T d1h2ba2         106 DFVGS  110 (172)
T ss_dssp             ESSCC
T ss_pred             EecCc
Confidence            99875

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.28  E-value=0.0086  Score=44.00  Aligned_cols=82  Identities=7%  Similarity=-0.030  Sum_probs=54.2

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEccc--CChhHHHHHhcCccE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV--LDSGAVSRAVEGCKG   83 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~--~d~~~~~~~~~~~d~   83 (307)
                      +.++|+++|.|-|.-+|+.|+..|+++|. .|+..............-..    -......|+  ...+.+++....+|+
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~ga-TVt~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~lk~~~~~aDI  100 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGA-TVYSVDVNNIQKFTRGESLK----LNKHHVEDLGEYSEDLLKKCSLDSDV  100 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSC-EEEEECSSEEEEEESCCCSS----CCCCEEEEEEECCHHHHHHHHHHCSE
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCC-EEEEecccccccccccccee----eeeeccccccccchhHHhhccccCCE
Confidence            46789999999999999999999999999 78766543211110000000    001111222  345678888889999


Q ss_pred             EEEeccCCC
Q 021819           84 VFHVASPCT   92 (307)
Q Consensus        84 vi~~a~~~~   92 (307)
                      ||..+|...
T Consensus       101 vIsavG~p~  109 (171)
T d1edza1         101 VITGVPSEN  109 (171)
T ss_dssp             EEECCCCTT
T ss_pred             EEEccCCCc
Confidence            999988644

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.24  E-value=0.0016  Score=47.26  Aligned_cols=64  Identities=11%  Similarity=0.001  Sum_probs=44.0

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      |||.+.|+ |-+|+++++.|++.|..+|++.+|+++..+.+....     ++... -   +.++    ++++|+||-+
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~-----~~~~~-~---~~~~----v~~~Div~la   64 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL-----GVETS-A---TLPE----LHSDDVLILA   64 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT-----CCEEE-S---SCCC----CCTTSEEEEC
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhc-----ccccc-c---cccc----ccccceEEEe
Confidence            47889985 999999999999888449999999876655544321     23222 1   2121    4668888876

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.22  E-value=0.0022  Score=48.64  Aligned_cols=67  Identities=10%  Similarity=0.053  Sum_probs=48.7

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      ++.+++|.|.| .|.||+.+++.|..=|. +|++.++........                +....+++.++++.+|+|+
T Consensus        40 el~gk~vgIiG-~G~IG~~va~~l~~fg~-~V~~~d~~~~~~~~~----------------~~~~~~~l~~~l~~sDii~  101 (197)
T d1j4aa1          40 EVRDQVVGVVG-TGHIGQVFMQIMEGFGA-KVITYDIFRNPELEK----------------KGYYVDSLDDLYKQADVIS  101 (197)
T ss_dssp             CGGGSEEEEEC-CSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHH----------------TTCBCSCHHHHHHHCSEEE
T ss_pred             cccCCeEEEec-ccccchhHHHhHhhhcc-cccccCccccccccc----------------ceeeecccccccccccccc
Confidence            35689999999 69999999999988899 999887654322111                0112235778888999888


Q ss_pred             EeccC
Q 021819           86 HVASP   90 (307)
Q Consensus        86 ~~a~~   90 (307)
                      .+...
T Consensus       102 ~~~pl  106 (197)
T d1j4aa1         102 LHVPD  106 (197)
T ss_dssp             ECSCC
T ss_pred             ccCCc
Confidence            87654

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.20  E-value=0.0045  Score=46.84  Aligned_cols=77  Identities=14%  Similarity=0.068  Sum_probs=53.9

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCCh---hHHHHHhc--Cc
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS---GAVSRAVE--GC   81 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~---~~~~~~~~--~~   81 (307)
                      ..+.+|+|.|+ |.+|...+..+...|..+|+++++++.+.+.++.+      +...+. |-.+.   +.+.++..  ++
T Consensus        24 ~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~------Ga~~~~-~~~~~~~~~~i~~~t~g~g~   95 (195)
T d1kola2          24 GPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ------GFEIAD-LSLDTPLHEQIAALLGEPEV   95 (195)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT------TCEEEE-TTSSSCHHHHHHHHHSSSCE
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhc------cccEEE-eCCCcCHHHHHHHHhCCCCc
Confidence            34679999985 99998888888788887899999887777666665      444432 32232   33444433  68


Q ss_pred             cEEEEeccCC
Q 021819           82 KGVFHVASPC   91 (307)
Q Consensus        82 d~vi~~a~~~   91 (307)
                      |++|.+.|.-
T Consensus        96 D~vid~vG~~  105 (195)
T d1kola2          96 DCAVDAVGFE  105 (195)
T ss_dssp             EEEEECCCTT
T ss_pred             EEEEECcccc
Confidence            9999998853

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=96.18  E-value=0.047  Score=42.53  Aligned_cols=105  Identities=13%  Similarity=0.097  Sum_probs=64.5

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCC-------------------CCCceEEEEcc
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA-------------------GDANLRVFEAD   67 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-------------------~~~~~~~i~~D   67 (307)
                      ++.++|+|.| .|++|++++..|...|..+++.++.+.-...++.+..-.                   .++.+.+...+
T Consensus        28 L~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~  106 (247)
T d1jw9b_          28 LKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  106 (247)
T ss_dssp             HHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhh
Confidence            3457999999 588999999999999998999988754444444332100                   01122222222


Q ss_pred             c-CChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEec
Q 021819           68 V-LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (307)
Q Consensus        68 ~-~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iS  130 (307)
                      . .+.+...+.+...|+++.+..                 |+.....+-+.|.++++. +|+-+
T Consensus       107 ~~~~~~~~~~~~~~~divid~~d-----------------~~~~~~~in~~~~~~~ip-~i~g~  152 (247)
T d1jw9b_         107 ALLDDAELAALIAEHDLVLDCTD-----------------NVAVRNQLNAGCFAAKVP-LVSGA  152 (247)
T ss_dssp             SCCCHHHHHHHHHTSSEEEECCS-----------------SHHHHHHHHHHHHHHTCC-EEEEE
T ss_pred             hhhhhccccccccccceeeeccc-----------------hhhhhhhHHHHHHHhCCC-ccccc
Confidence            2 133445556667788877631                 133345667778888864 66644

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.11  E-value=0.0052  Score=45.08  Aligned_cols=74  Identities=18%  Similarity=0.212  Sum_probs=49.7

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHH---HHhcCccE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVS---RAVEGCKG   83 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~---~~~~~~d~   83 (307)
                      ..+.+|+|.|+ |.+|...++.+...|. +|+++++++.+.+..+++      +...+ .|..+.+..+   +...+.+.
T Consensus        26 ~~g~~VlV~Ga-G~vG~~~~~~ak~~G~-~Vi~~~~~~~~~~~a~~~------Ga~~~-i~~~~~~~~~~~~~~~~g~~~   96 (166)
T d1llua2          26 RPGQWVAISGI-GGLGHVAVQYARAMGL-HVAAIDIDDAKLELARKL------GASLT-VNARQEDPVEAIQRDIGGAHG   96 (166)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHT------TCSEE-EETTTSCHHHHHHHHHSSEEE
T ss_pred             CCCCEEEEeec-cccHHHHHHHHHHcCC-ccceecchhhHHHhhhcc------Ccccc-ccccchhHHHHHHHhhcCCcc
Confidence            34679999886 9999999998888898 999999987777666655      22211 2444443333   33345566


Q ss_pred             EEEecc
Q 021819           84 VFHVAS   89 (307)
Q Consensus        84 vi~~a~   89 (307)
                      +|-+++
T Consensus        97 ~i~~~~  102 (166)
T d1llua2          97 VLVTAV  102 (166)
T ss_dssp             EEECCS
T ss_pred             cccccc
Confidence            666544

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.08  E-value=0.0066  Score=44.89  Aligned_cols=76  Identities=16%  Similarity=0.090  Sum_probs=51.4

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCCh----hHHHHHh--cC
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS----GAVSRAV--EG   80 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~----~~~~~~~--~~   80 (307)
                      +.+.+|+|.|+ |.+|...+..+...|..+|+++++++.+.+..+++      ++..+ .|..+.    +...+..  .+
T Consensus        27 k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~------GAd~~-in~~~~~~~~~~~~~~~~~~G   98 (175)
T d1cdoa2          27 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF------GATDF-VNPNDHSEPISQVLSKMTNGG   98 (175)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT------TCCEE-ECGGGCSSCHHHHHHHHHTSC
T ss_pred             CCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHHc------CCcEE-EcCCCcchhHHHHHHhhccCC
Confidence            34679999996 55777888888888776899999988888777776      33222 132221    2233332  26


Q ss_pred             ccEEEEeccC
Q 021819           81 CKGVFHVASP   90 (307)
Q Consensus        81 ~d~vi~~a~~   90 (307)
                      +|+++.++|.
T Consensus        99 ~d~vid~~G~  108 (175)
T d1cdoa2          99 VDFSLECVGN  108 (175)
T ss_dssp             BSEEEECSCC
T ss_pred             cceeeeecCC
Confidence            8999999875

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.06  E-value=0.0044  Score=46.79  Aligned_cols=70  Identities=11%  Similarity=-0.038  Sum_probs=49.9

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      +..++++.|.| .|-||+.+++.|..-|. +|++.++..........       +       +...++++++++.+|+|+
T Consensus        46 eL~gktvgIiG-~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~-------~-------~~~~~~l~~ll~~sD~i~  109 (193)
T d1mx3a1          46 RIRGETLGIIG-LGRVGQAVALRAKAFGF-NVLFYDPYLSDGVERAL-------G-------LQRVSTLQDLLFHSDCVT  109 (193)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTC-EEEEECTTSCTTHHHHH-------T-------CEECSSHHHHHHHCSEEE
T ss_pred             eeeCceEEEec-cccccccceeeeecccc-ceeeccCcccccchhhh-------c-------cccccchhhccccCCEEE
Confidence            45688999998 69999999999988899 99998875443221110       1       112245778888899888


Q ss_pred             EeccCC
Q 021819           86 HVASPC   91 (307)
Q Consensus        86 ~~a~~~   91 (307)
                      .+....
T Consensus       110 ~~~plt  115 (193)
T d1mx3a1         110 LHCGLN  115 (193)
T ss_dssp             ECCCCC
T ss_pred             Eeeccc
Confidence            776543

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.99  E-value=0.0034  Score=47.73  Aligned_cols=69  Identities=17%  Similarity=0.120  Sum_probs=47.9

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHh-cCccEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV-EGCKGV   84 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~-~~~d~v   84 (307)
                      ++++++|+|-| .|.+|+++++.|.+.|. +|++.+.+..........      +...+     +.+   +++ .+||++
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Ga-kvvv~d~d~~~~~~~~~~------g~~~~-----~~~---~~~~~~~DI~   87 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVAL------GHTAV-----ALE---DVLSTPCDVF   87 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT------TCEEC-----CGG---GGGGCCCSEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCC-EEEEecchHHHHHHHHhh------ccccc-----Ccc---ccccccceee
Confidence            46789999998 79999999999999999 888777654333332222      22222     222   234 389999


Q ss_pred             EEeccC
Q 021819           85 FHVASP   90 (307)
Q Consensus        85 i~~a~~   90 (307)
                      +-||..
T Consensus        88 iPcA~~   93 (201)
T d1c1da1          88 APCAMG   93 (201)
T ss_dssp             EECSCS
T ss_pred             eccccc
Confidence            999765

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.97  E-value=0.0014  Score=48.91  Aligned_cols=75  Identities=12%  Similarity=0.129  Sum_probs=48.3

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      |||-|.| .|.+|..+++.|+++|+ +|++.+|++++.+.+.+...... ...... ...+.+.+...+...+.++-+.
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G~-~V~~~dr~~~~~~~l~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~   76 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKGF-KVAVFNRTYSKSEEFMKANASAP-FAGNLK-AFETMEAFAASLKKPRKALILV   76 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTTTST-TGGGEE-ECSCHHHHHHHBCSSCEEEECC
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCCccc-cccchh-hhhhhhHHHHhcccceEEEEee
Confidence            3788888 79999999999999999 99999998776655533211100 000111 1234455666666666666553

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.95  E-value=0.0049  Score=48.29  Aligned_cols=38  Identities=24%  Similarity=0.262  Sum_probs=32.7

Q ss_pred             cccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC
Q 021819            5 AEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (307)
Q Consensus         5 ~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (307)
                      |+...++|+|.|| |..|...+..|.++|+ +|.++.|..
T Consensus         2 ~~~~~~kVvVIGa-GiaGl~~A~~L~~~G~-~V~vier~~   39 (268)
T d1c0pa1           2 MMHSQKRVVVLGS-GVIGLSSALILARKGY-SVHILARDL   39 (268)
T ss_dssp             CCCCSCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSC
T ss_pred             CCCCCCcEEEECc-cHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            4455679999996 9999999999999999 999998853

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.95  E-value=0.014  Score=41.13  Aligned_cols=72  Identities=24%  Similarity=0.273  Sum_probs=45.3

Q ss_pred             EEEEeCCchhhHHHHHHHHHHC-CCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-----CccEE
Q 021819           11 TVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-----GCKGV   84 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-----~~d~v   84 (307)
                      ||.|.|++|-+|+.|++.+.+. ++ ++.+..-..+........      +.. +-.|.+.++.+.+.++     ++-.|
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~-~l~~~~d~~~~~~~~~~~------~~D-vvIDFS~p~~~~~~~~~~~~~~~~~V   72 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDL-TLSAELDAGDPLSLLTDG------NTE-VVIDFTHPDVVMGNLEFLIDNGIHAV   72 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTS-EEEEEECTTCCTHHHHTT------TCS-EEEECCCTTTHHHHHHHHHHTTCEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEecCCchhhhccc------cCC-EEEEcccHHHHHHHHHHHHhcCCCEE
Confidence            6899999999999999998876 45 665544322222222111      222 2368888877766654     55666


Q ss_pred             EEeccC
Q 021819           85 FHVASP   90 (307)
Q Consensus        85 i~~a~~   90 (307)
                      +=..|.
T Consensus        73 iGTTG~   78 (135)
T d1yl7a1          73 VGTTGF   78 (135)
T ss_dssp             ECCCCC
T ss_pred             Eecccc
Confidence            654443

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=95.94  E-value=0.014  Score=43.17  Aligned_cols=76  Identities=18%  Similarity=0.112  Sum_probs=56.7

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEccc--------------------
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADV--------------------   68 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~--------------------   68 (307)
                      .-+|+|.|| |-.|.+-++....-|. +|.+++.+....+.++.+..      .++..+.                    
T Consensus        29 pa~VvViGa-GvaG~~Aa~~A~~lGA-~V~v~D~~~~~~~~l~~l~~------~~i~~~~~~~~~~~~~~gyA~~~s~~~  100 (183)
T d1l7da1          29 PARVLVFGV-GVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGG------KFITVDDEAMKTAETAGGYAKEMGEEF  100 (183)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTC------EECCC----------------------
T ss_pred             CcEEEEEcC-cHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhhc------ceEEEeccccccccccccchhhcCHHH
Confidence            358999996 9999999999999999 99999998888777766522      2221111                    


Q ss_pred             --CChhHHHHHhcCccEEEEeccCCC
Q 021819           69 --LDSGAVSRAVEGCKGVFHVASPCT   92 (307)
Q Consensus        69 --~d~~~~~~~~~~~d~vi~~a~~~~   92 (307)
                        .+.+.+.+.++++|.||-.+-...
T Consensus       101 ~~~~~~~l~~~l~~aDlVI~talipG  126 (183)
T d1l7da1         101 RKKQAEAVLKELVKTDIAITTALIPG  126 (183)
T ss_dssp             -CCHHHHHHHHHTTCSEEEECCCCTT
T ss_pred             HHHHHHHHHHHHHhhhhheeeeecCC
Confidence              123557777889999999987644

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=95.87  E-value=0.012  Score=38.85  Aligned_cols=76  Identities=16%  Similarity=0.278  Sum_probs=50.7

Q ss_pred             CccccccCCcEEEEeCCchhhH-HHHHHHHHHCCCCeEEEEeCCCCC-CcccccCCCCCCCceEEEEcccCChhHHHHHh
Q 021819            1 MASEAEKEEETVCVTGANGFIG-TWLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAV   78 (307)
Q Consensus         1 m~~m~~~~~~~ilItGatG~iG-~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~   78 (307)
                      |.+++ .+.|+|.+.|. |++| ++||+.|.++|+ +|.+.++.... .+.+.+.      ++.+..++-  ++    .+
T Consensus         1 ~~~~~-~~~~~ihfiGi-gG~GMs~LA~~L~~~G~-~VsGSD~~~~~~~~~L~~~------Gi~v~~g~~--~~----~i   65 (96)
T d1p3da1           1 IIPEM-RRVQQIHFIGI-GGAGMSGIAEILLNEGY-QISGSDIADGVVTQRLAQA------GAKIYIGHA--EE----HI   65 (96)
T ss_dssp             CCCCC-TTCCEEEEETT-TSTTHHHHHHHHHHHTC-EEEEEESCCSHHHHHHHHT------TCEEEESCC--GG----GG
T ss_pred             CCccc-hhCCEEEEEEE-CHHHHHHHHHHHHhCCC-EEEEEeCCCChhhhHHHHC------CCeEEECCc--cc----cC
Confidence            33333 34678999986 5556 788999999999 99999986432 2333332      566555442  22    24


Q ss_pred             cCccEEEEeccCC
Q 021819           79 EGCKGVFHVASPC   91 (307)
Q Consensus        79 ~~~d~vi~~a~~~   91 (307)
                      +++|.||...|+.
T Consensus        66 ~~~d~vV~S~AI~   78 (96)
T d1p3da1          66 EGASVVVVSSAIK   78 (96)
T ss_dssp             TTCSEEEECTTSC
T ss_pred             CCCCEEEECCCcC
Confidence            6889999987763

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.80  E-value=0.0081  Score=41.54  Aligned_cols=36  Identities=17%  Similarity=0.171  Sum_probs=31.8

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   46 (307)
                      .++++|.|| |++|..++..|.+.|. +|+.+.+++..
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~-~Vtli~~~~~~   65 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGV-HVSLVETQPRL   65 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSSST
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccc-eEEEEeecccc
Confidence            579999995 9999999999999999 99999886543

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=95.78  E-value=0.0014  Score=49.61  Aligned_cols=40  Identities=8%  Similarity=0.089  Sum_probs=32.1

Q ss_pred             CCcEEEE-eCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCc
Q 021819            8 EEETVCV-TGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS   48 (307)
Q Consensus         8 ~~~~ilI-tGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~   48 (307)
                      ++.+++| +||+|.+|...++.....|. +|++++|+.+..+
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga-~vI~~v~~~~~~~   68 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLD   68 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHH
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhhcCC-eEEEEEecccccc
Confidence            3455566 69999999999999888899 8999988766543

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.71  E-value=0.0094  Score=43.58  Aligned_cols=73  Identities=16%  Similarity=0.109  Sum_probs=50.9

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCCh---hHHHHHhcCccEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDS---GAVSRAVEGCKGV   84 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~---~~~~~~~~~~d~v   84 (307)
                      ++.+|+|.|+ |.+|...++.+...|. +|+++++++.+.+.++.+      ++..+. |-.+.   +.+.+.-.+.|.+
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~-~v~~~~~~~~r~~~~k~~------Ga~~~~-~~~~~~~~~~~~~~~~~~~~~   97 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKEL------GADLVV-NPLKEDAAKFMKEKVGGVHAA   97 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT------TCSEEE-CTTTSCHHHHHHHHHSSEEEE
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCC-eEeccCCCHHHhhhhhhc------Ccceec-ccccchhhhhcccccCCCceE
Confidence            4679999875 9999999999888899 899999888777777665      343333 22222   3344445567777


Q ss_pred             EEecc
Q 021819           85 FHVAS   89 (307)
Q Consensus        85 i~~a~   89 (307)
                      |-+++
T Consensus        98 v~~~~  102 (168)
T d1rjwa2          98 VVTAV  102 (168)
T ss_dssp             EESSC
T ss_pred             EeecC
Confidence            76654

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.68  E-value=0.0069  Score=45.48  Aligned_cols=70  Identities=17%  Similarity=0.035  Sum_probs=49.5

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      ++.++++.|.| .|.||+.+++.|..-|. +|...++........+..      +       +....++.++++++|+|+
T Consensus        41 ~l~~~~vgiiG-~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~------~-------~~~~~~l~~~l~~sD~v~  105 (188)
T d2naca1          41 DLEAMHVGTVA-AGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKEL------N-------LTWHATREDMYPVCDVVT  105 (188)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHH------T-------CEECSSHHHHGGGCSEEE
T ss_pred             eccccceeecc-ccccchhhhhhhhccCc-eEEEEeeccccccccccc------c-------ccccCCHHHHHHhccchh
Confidence            35678999999 69999999999988899 899998865433222211      1       112245667888899887


Q ss_pred             EeccC
Q 021819           86 HVASP   90 (307)
Q Consensus        86 ~~a~~   90 (307)
                      .+...
T Consensus       106 ~~~pl  110 (188)
T d2naca1         106 LNCPL  110 (188)
T ss_dssp             ECSCC
T ss_pred             hcccc
Confidence            76554

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.64  E-value=0.017  Score=43.23  Aligned_cols=67  Identities=15%  Similarity=0.005  Sum_probs=48.9

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      ++.++++.|.| .|.||+.+++.|..-|. +|+..++.......          ...       ..++++++++.+|+|+
T Consensus        41 ~l~~~~vgiiG-~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~----------~~~-------~~~~l~ell~~sDii~  101 (188)
T d1sc6a1          41 EARGKKLGIIG-YGHIGTQLGILAESLGM-YVYFYDIENKLPLG----------NAT-------QVQHLSDLLNMSDVVS  101 (188)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTC-EEEEECSSCCCCCT----------TCE-------ECSCHHHHHHHCSEEE
T ss_pred             cccceEEEEee-cccchhhhhhhcccccc-eEeeccccccchhh----------hhh-------hhhhHHHHHhhcccee
Confidence            35678999998 79999999999988899 99998875432211          111       1135778888999988


Q ss_pred             EeccCC
Q 021819           86 HVASPC   91 (307)
Q Consensus        86 ~~a~~~   91 (307)
                      .+....
T Consensus       102 i~~plt  107 (188)
T d1sc6a1         102 LHVPEN  107 (188)
T ss_dssp             ECCCSS
T ss_pred             ecccCC
Confidence            876654

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=95.57  E-value=0.022  Score=41.75  Aligned_cols=64  Identities=14%  Similarity=0.235  Sum_probs=39.3

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHC-CCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEec
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDN-NYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHVA   88 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~a   88 (307)
                      .||.|.| +|.+|+.+++.|.+. +. +++++..+......          ......     ..+.....+++|+|+.+.
T Consensus         4 irvgiiG-~G~ig~~~~~~l~~~~~~-elvav~~~~~~~~~----------~~~~~~-----~~~~~~~~~~~D~Vvi~t   66 (170)
T d1f06a1           4 IRVAIVG-YGNLGRSVEKLIAKQPDM-DLVGIFSRRATLDT----------KTPVFD-----VADVDKHADDVDVLFLCM   66 (170)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHTTCSSE-EEEEEEESSSCCSS----------SSCEEE-----GGGGGGTTTTCSEEEECS
T ss_pred             ceEEEEC-ChHHHHHHHHHHHhCCCc-EEEEEEeccccccc----------cccccc-----chhhhhhccccceEEEeC
Confidence            4899998 699999999999876 45 66665543322111          111111     122334456899999875


Q ss_pred             cC
Q 021819           89 SP   90 (307)
Q Consensus        89 ~~   90 (307)
                      +.
T Consensus        67 p~   68 (170)
T d1f06a1          67 GS   68 (170)
T ss_dssp             CT
T ss_pred             CC
Confidence            54

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.56  E-value=0.018  Score=41.87  Aligned_cols=58  Identities=16%  Similarity=0.061  Sum_probs=45.5

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      ..+|+|+|.|-+..+|+.|+..|.++|+ .|+......                           ..+.+..+++|+||.
T Consensus        35 l~GK~v~VIGrS~~VG~Pla~lL~~~ga-tVt~~h~~t---------------------------~~l~~~~~~ADivI~   86 (166)
T d1b0aa1          35 TFGLNAVVIGASNIVGRPMSMELLLAGC-TTTVTHRFT---------------------------KNLRHHVENADLLIV   86 (166)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHTTTC-EEEEECSSC---------------------------SCHHHHHHHCSEEEE
T ss_pred             cccceEEEEeccccccHHHHHHHHHhhc-ccccccccc---------------------------chhHHHHhhhhHhhh
Confidence            5689999999999999999999999999 777653211                           124456678899999


Q ss_pred             eccCCC
Q 021819           87 VASPCT   92 (307)
Q Consensus        87 ~a~~~~   92 (307)
                      ++|...
T Consensus        87 a~G~p~   92 (166)
T d1b0aa1          87 AVGKPG   92 (166)
T ss_dssp             CSCCTT
T ss_pred             hccCcc
Confidence            988644

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.55  E-value=0.011  Score=50.41  Aligned_cols=77  Identities=19%  Similarity=0.125  Sum_probs=50.8

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCC--CC-------------------CCCceEEEEc
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALP--GA-------------------GDANLRVFEA   66 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~--~~-------------------~~~~~~~i~~   66 (307)
                      +..||+|.|+ |++|..+++.|...|..++..++.+.-...++.+..  ..                   ...++..+..
T Consensus        36 ~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~  114 (426)
T d1yovb1          36 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFN  114 (426)
T ss_dssp             HHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEECS
T ss_pred             hcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeeec
Confidence            3468999997 779999999999999988998887543333332210  00                   0114455555


Q ss_pred             ccCChhHHHHHhcCccEEEEe
Q 021819           67 DVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus        67 D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      ++.+..  .+.++++|+||.+
T Consensus       115 ~i~~~~--~~~~~~~DlVi~~  133 (426)
T d1yovb1         115 KIQDFN--DTFYRQFHIIVCG  133 (426)
T ss_dssp             CGGGBC--HHHHTTCSEEEEC
T ss_pred             cccchH--HHHHHhcchheec
Confidence            555433  3567888888876

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.54  E-value=0.019  Score=42.44  Aligned_cols=34  Identities=18%  Similarity=0.263  Sum_probs=27.4

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP   43 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~   43 (307)
                      |-||.|-| .|-||+.++|.|.+++.-+|+++...
T Consensus         1 MIKVaING-fGRIGR~v~Ral~~~~dievVaInd~   34 (178)
T d1b7go1           1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKT   34 (178)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECS
T ss_pred             CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECC
Confidence            45899998 79999999999998854378777543

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.54  E-value=0.012  Score=40.77  Aligned_cols=36  Identities=19%  Similarity=0.310  Sum_probs=31.4

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCC
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~   45 (307)
                      +.++|+|.|| |++|..++..|.+.|. +|+.+.+.+.
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~-~Vtlie~~~~   64 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGK-KVTVIDILDR   64 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccce-EEEEEEecCc
Confidence            4679999985 9999999999999999 8999887653

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.49  E-value=0.015  Score=43.93  Aligned_cols=66  Identities=18%  Similarity=0.108  Sum_probs=47.9

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      ++.+++|.|.| .|-||+.+++.|..=|. +|++.++........         .+        +..++.++++.+|+|+
T Consensus        42 ~l~~ktvgIiG-~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~---------~~--------~~~~l~~l~~~~D~v~  102 (199)
T d1dxya1          42 ELGQQTVGVMG-TGHIGQVAIKLFKGFGA-KVIAYDPYPMKGDHP---------DF--------DYVSLEDLFKQSDVID  102 (199)
T ss_dssp             CGGGSEEEEEC-CSHHHHHHHHHHHHTTC-EEEEECSSCCSSCCT---------TC--------EECCHHHHHHHCSEEE
T ss_pred             cccceeeeeee-cccccccccccccccce-eeeccCCccchhhhc---------ch--------hHHHHHHHHHhcccce
Confidence            34578999999 69999999999998899 999998854432110         11        1124677888899988


Q ss_pred             EeccC
Q 021819           86 HVASP   90 (307)
Q Consensus        86 ~~a~~   90 (307)
                      .+...
T Consensus       103 ~~~pl  107 (199)
T d1dxya1         103 LHVPG  107 (199)
T ss_dssp             ECCCC
T ss_pred             eeecc
Confidence            77544

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.45  E-value=0.0087  Score=45.01  Aligned_cols=71  Identities=15%  Similarity=0.052  Sum_probs=49.6

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      +..++++.|.| .|.||+.+++.|..-|. +|+..++...........             .....+++.++++.+|+|+
T Consensus        44 ~l~g~tvgIiG-~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~-------------~~~~~~~l~~ll~~sD~v~  108 (191)
T d1gdha1          44 KLDNKTLGIYG-FGSIGQALAKRAQGFDM-DIDYFDTHRASSSDEASY-------------QATFHDSLDSLLSVSQFFS  108 (191)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHHHH-------------TCEECSSHHHHHHHCSEEE
T ss_pred             eecccceEEee-cccchHHHHHHHHhhcc-ccccccccccccchhhcc-------------cccccCCHHHHHhhCCeEE
Confidence            34578999999 59999999999988899 898888754432221110             1112245778889999988


Q ss_pred             EeccCC
Q 021819           86 HVASPC   91 (307)
Q Consensus        86 ~~a~~~   91 (307)
                      .+....
T Consensus       109 l~~plt  114 (191)
T d1gdha1         109 LNAPST  114 (191)
T ss_dssp             ECCCCC
T ss_pred             ecCCCC
Confidence            776543

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.42  E-value=0.027  Score=41.17  Aligned_cols=58  Identities=14%  Similarity=0.099  Sum_probs=44.8

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      +++|+|+|.|-+..+|+.|+..|.++|. .|+......                           ..+.+...++|++|.
T Consensus        37 l~Gk~vvVIGrS~iVGrPLa~lL~~~ga-tVt~~~~~t---------------------------~~l~~~~~~aDivi~   88 (170)
T d1a4ia1          37 IAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSKT---------------------------AHLDEEVNKGDILVV   88 (170)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC---------------------------SSHHHHHTTCSEEEE
T ss_pred             cccceEEEEecCCccchHHHHHHHhccC-ceEEEeccc---------------------------ccHHHHHhhccchhh
Confidence            5689999999999999999999999999 777654321                           123455678888888


Q ss_pred             eccCCC
Q 021819           87 VASPCT   92 (307)
Q Consensus        87 ~a~~~~   92 (307)
                      ++|...
T Consensus        89 a~G~~~   94 (170)
T d1a4ia1          89 ATGQPE   94 (170)
T ss_dssp             CCCCTT
T ss_pred             cccccc
Confidence            877644

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.40  E-value=0.012  Score=40.24  Aligned_cols=36  Identities=19%  Similarity=0.251  Sum_probs=31.5

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   46 (307)
                      .++++|.|| |++|..++..|.+.|. +|+.+.|.+.-
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~-~Vtlve~~~~i   57 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGT-KVTILEGAGEI   57 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSSSS
T ss_pred             CCeEEEECC-Cccceeeeeeeccccc-EEEEEEeccee
Confidence            368999996 9999999999999999 99999886543

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.33  E-value=0.012  Score=40.31  Aligned_cols=36  Identities=11%  Similarity=0.153  Sum_probs=31.6

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   46 (307)
                      .++++|.|| |++|-.++..|...|. +|+.+.|.+..
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~-~Vtlv~~~~~i   57 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGI-DSYIFARGNRI   57 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTC-EEEEECSSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccc-cceeeehhccc
Confidence            579999996 9999999999999999 99999886543

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.26  E-value=0.0086  Score=43.48  Aligned_cols=70  Identities=14%  Similarity=0.065  Sum_probs=50.4

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      +.+|+++|.| .|.||+.+++.|...|. +|++....+...  +.....    ++..        ..+++++...|++|.
T Consensus        22 l~Gk~v~V~G-yG~iG~g~A~~~rg~G~-~V~v~e~dp~~a--l~A~~d----G~~v--------~~~~~a~~~adivvt   85 (163)
T d1li4a1          22 IAGKVAVVAG-YGDVGKGCAQALRGFGA-RVIITEIDPINA--LQAAME----GYEV--------TTMDEACQEGNIFVT   85 (163)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTC-EEEEECSCHHHH--HHHHHT----TCEE--------CCHHHHTTTCSEEEE
T ss_pred             ecCCEEEEec-cccccHHHHHHHHhCCC-eeEeeecccchh--HHhhcC----ceEe--------eehhhhhhhccEEEe
Confidence            5689999999 79999999999999999 999988765332  111100    2221        235677888999999


Q ss_pred             eccCCC
Q 021819           87 VASPCT   92 (307)
Q Consensus        87 ~a~~~~   92 (307)
                      +.|...
T Consensus        86 aTGn~~   91 (163)
T d1li4a1          86 TTGCID   91 (163)
T ss_dssp             CSSCSC
T ss_pred             cCCCcc
Confidence            887643

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.25  E-value=0.014  Score=43.63  Aligned_cols=68  Identities=13%  Similarity=-0.040  Sum_probs=48.3

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      ..++++.|.| .|.||+.+++.|..-|. +|++.++..........       .+.        ..+++++++++|+|+.
T Consensus        42 l~~k~vgiiG-~G~IG~~va~~~~~fg~-~v~~~d~~~~~~~~~~~-------~~~--------~~~l~ell~~sDiv~~  104 (184)
T d1ygya1          42 IFGKTVGVVG-LGRIGQLVAQRIAAFGA-YVVAYDPYVSPARAAQL-------GIE--------LLSLDDLLARADFISV  104 (184)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTC-EEEEECTTSCHHHHHHH-------TCE--------ECCHHHHHHHCSEEEE
T ss_pred             ccceeeeecc-ccchhHHHHHHhhhccc-eEEeecCCCChhHHhhc-------Cce--------eccHHHHHhhCCEEEE
Confidence            4578999998 69999999999988898 89998876443322111       111        1246678889999887


Q ss_pred             eccCC
Q 021819           87 VASPC   91 (307)
Q Consensus        87 ~a~~~   91 (307)
                      +....
T Consensus       105 ~~Plt  109 (184)
T d1ygya1         105 HLPKT  109 (184)
T ss_dssp             CCCCS
T ss_pred             cCCCC
Confidence            76543

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.23  E-value=0.0086  Score=45.11  Aligned_cols=36  Identities=14%  Similarity=0.170  Sum_probs=32.4

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   46 (307)
                      -++|.|.|+ |.+|+.++..++..|+ +|+..+++++.
T Consensus         4 IkkvaViGa-G~mG~~iA~~~a~~G~-~V~l~D~~~~~   39 (192)
T d1f0ya2           4 VKHVTVIGG-GLMGAGIAQVAAATGH-TVVLVDQTEDI   39 (192)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSCHHH
T ss_pred             eEEEEEECc-CHHHHHHHHHHHhCCC-cEEEEECChHH
Confidence            469999997 9999999999999999 99999997654

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=95.23  E-value=0.037  Score=38.33  Aligned_cols=93  Identities=8%  Similarity=0.075  Sum_probs=58.4

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHH-CCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhc-CccEEEE
Q 021819            9 EETVCVTGANGFIGTWLVKTLLD-NNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVE-GCKGVFH   86 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~-~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~-~~d~vi~   86 (307)
                      ..+|+|.|| |.+|++|++++.. .++ +++++.-+.+......-.      ++.++.     .+.+.++.+ .++.++-
T Consensus         3 ~~~v~I~Ga-G~~G~~l~~~l~~~~~~-~iv~fiDdd~~k~G~~I~------Gi~V~~-----~~~l~~~~~~~i~iai~   69 (126)
T d2dt5a2           3 KWGLCIVGM-GRLGSALADYPGFGESF-ELRGFFDVDPEKVGRPVR------GGVIEH-----VDLLPQRVPGRIEIALL   69 (126)
T ss_dssp             CEEEEEECC-SHHHHHHHHCSCCCSSE-EEEEEEESCTTTTTCEET------TEEEEE-----GGGHHHHSTTTCCEEEE
T ss_pred             CceEEEEcC-CHHHHHHHHhHhhcCCc-EEEEEEeCchHhcCCEEC------CEEEec-----HHHHHHHHhhcccEEEE
Confidence            348999995 9999999998754 367 777776644333221111      555543     334666554 4555554


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecCc
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSSI  132 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS~  132 (307)
                      +...                  ...+.+++.|.+.|++.+..++..
T Consensus        70 ~i~~------------------~~~~~I~d~l~~~gIk~I~~f~~~   97 (126)
T d2dt5a2          70 TVPR------------------EAAQKAADLLVAAGIKGILNFAPV   97 (126)
T ss_dssp             CSCH------------------HHHHHHHHHHHHHTCCEEEECSSS
T ss_pred             eCCH------------------HHHHHHHHHHHHcCCCEEeecCce
Confidence            4221                  124568888989999988887753

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.21  E-value=0.016  Score=40.01  Aligned_cols=36  Identities=14%  Similarity=0.189  Sum_probs=31.6

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   46 (307)
                      .++++|.|| |+||..++..|.+.|. +|..+.+++..
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~-~Vtii~~~~~~   58 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGS-KVTVVEFQPQI   58 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCc-ceeEEEecccc
Confidence            369999995 9999999999999999 99999886543

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.13  E-value=0.017  Score=39.45  Aligned_cols=36  Identities=25%  Similarity=0.239  Sum_probs=31.3

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   46 (307)
                      .++++|.|| |++|..++..|.+.|. +|..+.|.+..
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~-~Vtlve~~~~~   56 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGA-KTHLFEMFDAP   56 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhcccc-EEEEEeecchh
Confidence            368999995 9999999999999999 99999886543

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.00  E-value=0.012  Score=42.38  Aligned_cols=35  Identities=11%  Similarity=0.226  Sum_probs=31.0

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeC
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF   42 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r   42 (307)
                      ++++|+|+|.|| |.+|..-++.|++.|. +|+.+..
T Consensus        10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA-~VtVvap   44 (150)
T d1kyqa1          10 QLKDKRILLIGG-GEVGLTRLYKLMPTGC-KLTLVSP   44 (150)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGGTC-EEEEEEE
T ss_pred             eeCCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEeC
Confidence            467899999997 8899999999999999 8887754

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.90  E-value=0.022  Score=39.45  Aligned_cols=36  Identities=14%  Similarity=0.136  Sum_probs=31.7

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   46 (307)
                      .|+++|.|| |+||-.++..|.+.|. +|+.+.|++..
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~-~Vtlv~~~~~~   57 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGS-KTSLMIRHDKV   57 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCc-EEEEEeecccc
Confidence            368999996 9999999999999999 99999886543

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=94.90  E-value=0.032  Score=35.98  Aligned_cols=68  Identities=13%  Similarity=0.145  Sum_probs=45.9

Q ss_pred             cEEEEeCCchhhHH-HHHHHHHHCCCCeEEEEeCCCCC-CcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEEe
Q 021819           10 ETVCVTGANGFIGT-WLVKTLLDNNYTSINATVFPGSD-SSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFHV   87 (307)
Q Consensus        10 ~~ilItGatG~iG~-~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~~   87 (307)
                      |+|.++|. |++|. .||+.|.++|+ .|.+.++...+ .+.+...      ++.+..+.  +++    .++++|.||..
T Consensus         2 ~~ihfiGI-gG~GMs~LA~~L~~~G~-~VsGSD~~~~~~t~~L~~~------Gi~i~~gh--~~~----~i~~~d~vV~S   67 (89)
T d1j6ua1           2 MKIHFVGI-GGIGMSAVALHEFSNGN-DVYGSNIEETERTAYLRKL------GIPIFVPH--SAD----NWYDPDLVIKT   67 (89)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHT------TCCEESSC--CTT----SCCCCSEEEEC
T ss_pred             cEEEEEeE-CHHHHHHHHHHHHhCCC-eEEEEeCCCChhHHHHHHC------CCeEEeee--ccc----ccCCCCEEEEe
Confidence            47888886 55554 89999999999 99999986433 2334333      55554432  222    13678999998


Q ss_pred             ccCC
Q 021819           88 ASPC   91 (307)
Q Consensus        88 a~~~   91 (307)
                      .++.
T Consensus        68 sAI~   71 (89)
T d1j6ua1          68 PAVR   71 (89)
T ss_dssp             TTCC
T ss_pred             cCcC
Confidence            8874

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.86  E-value=0.017  Score=39.79  Aligned_cols=34  Identities=24%  Similarity=0.384  Sum_probs=29.9

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (307)
                      .++++|.|| |++|-.++..|.+.|. +|+.+.|++
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~-~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGY-HVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccc-eEEEEeccc
Confidence            368999995 9999999999999999 899887754

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=94.86  E-value=0.014  Score=43.68  Aligned_cols=37  Identities=16%  Similarity=0.179  Sum_probs=32.6

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   46 (307)
                      +-++|.|.|+ |.+|+.++..++..|+ +|+..+++++.
T Consensus         3 ~I~~vaViGa-G~mG~~iA~~~a~~G~-~V~l~D~~~~~   39 (186)
T d1wdka3           3 DVKQAAVLGA-GIMGGGIAYQSASKGT-PILMKDINEHG   39 (186)
T ss_dssp             CCSSEEEECC-HHHHHHHHHHHHHTTC-CEEEECSSHHH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCC-eEEEEECCHHH
Confidence            3568999997 9999999999999999 99999987654

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=94.84  E-value=0.025  Score=38.81  Aligned_cols=36  Identities=19%  Similarity=0.073  Sum_probs=31.5

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   46 (307)
                      .++++|.|| |+||-.++..|.+.|. +|..+.+++..
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~-~Vtiv~~~~~l   57 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGA-EVTVLEAMDKF   57 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTC-EEEEEESSSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCC-ceEEEEeeccc
Confidence            368999995 9999999999999999 99999886543

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=94.72  E-value=0.026  Score=39.58  Aligned_cols=37  Identities=19%  Similarity=0.314  Sum_probs=32.0

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   46 (307)
                      +.++++|.|| |++|..++..|.+.|. +|..+.+.+..
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~-~Vtvie~~~~~   70 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANM-HVTLLDTAARV   70 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSSST
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCc-ceeeeeecccc
Confidence            3579999995 9999999999999999 99998886543

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.55  E-value=0.024  Score=38.52  Aligned_cols=36  Identities=17%  Similarity=0.159  Sum_probs=31.0

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   46 (307)
                      .++++|.|| |++|-.++..|.+.|. +|+.+.+.+..
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~-~Vtlve~~~~i   56 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGA-QVSVVEARERI   56 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTC-EEEEECSSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhccc-ceEEEeeeccc
Confidence            368999985 9999999999999999 99998886543

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.54  E-value=0.03  Score=48.98  Aligned_cols=103  Identities=13%  Similarity=0.042  Sum_probs=61.6

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccc-----------------------cCCCCCCCceEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLF-----------------------ALPGAGDANLRVF   64 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-----------------------~~~~~~~~~~~~i   64 (307)
                      +..+|+|.|+ |.+|..+++.|...|...++.++.+.-....+.                       ++.+.  .++..+
T Consensus        24 ~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~--v~i~~~  100 (529)
T d1yova1          24 ESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSD--VSGSFV  100 (529)
T ss_dssp             HHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTT--SBCCEE
T ss_pred             hCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCC--CcEEEE
Confidence            3569999996 789999999999999888888866432222221                       11110  023333


Q ss_pred             EcccCCh-hHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           65 EADVLDS-GAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        65 ~~D~~d~-~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      ..++.+. +.-.+.++++|+||.+..                 |......+-+.|+++++. +|+.+|
T Consensus       101 ~~~~~~~~~~~~~~~~~~dvVv~~~~-----------------~~~~~~~l~~~c~~~~ip-~i~~~~  150 (529)
T d1yova1         101 EESPENLLDNDPSFFCRFTVVVATQL-----------------PESTSLRLADVLWNSQIP-LLICRT  150 (529)
T ss_dssp             SSCHHHHHHSCGGGGGGCSEEEEESC-----------------CHHHHHHHHHHHHHHTCC-EEEEEE
T ss_pred             cCCchhhhhhHHHHhcCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCC-EEEEec
Confidence            3332211 011134567888887631                 133345678888888865 777776

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.49  E-value=0.037  Score=37.85  Aligned_cols=38  Identities=13%  Similarity=-0.088  Sum_probs=32.2

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   46 (307)
                      .+.++++|.|| |++|..++..|.+.|. +|..+.|++..
T Consensus        20 ~~~~~vvVvGg-G~ig~E~A~~l~~~g~-~vt~i~~~~~~   57 (121)
T d1mo9a2          20 EPGSTVVVVGG-SKTAVEYGCFFNATGR-RTVMLVRTEPL   57 (121)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSCTT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcch-hheEeeccchh
Confidence            34679999995 9999999999999999 99998886543

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.35  E-value=0.024  Score=39.10  Aligned_cols=33  Identities=15%  Similarity=0.135  Sum_probs=29.1

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP   43 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~   43 (307)
                      .++++|.|| |+||..++..|.+.|. +|..+.|+
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~-~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGL-DVTVMVRS   52 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCC-eEEEEEec
Confidence            358999995 9999999999999999 89888764

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=94.32  E-value=0.11  Score=37.78  Aligned_cols=33  Identities=12%  Similarity=0.271  Sum_probs=26.8

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVF   42 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r   42 (307)
                      |++|.|-| .|-||+.+++.|.+++.-+|+++.-
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd   33 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSK   33 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEE
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEec
Confidence            57999998 7999999999998886546766544

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.21  E-value=0.063  Score=36.49  Aligned_cols=83  Identities=17%  Similarity=0.287  Sum_probs=54.4

Q ss_pred             cEEEEeCCc---hhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819           10 ETVCVTGAN---GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus        10 ~~ilItGat---G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      |+|.|.|+|   +-.|..+.+.|++.|+ +|+.+..+.  . ...        +...+       .++.++-..+|.++-
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~-~V~pVnP~~--~-~i~--------G~~~y-------~sl~~lp~~~D~vvi   62 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGF-EVLPVNPNY--D-EIE--------GLKCY-------RSVRELPKDVDVIVF   62 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTC-EEEEECTTC--S-EET--------TEECB-------SSGGGSCTTCCEEEE
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCC-EEEEEcccc--c-ccc--------Ccccc-------ccchhccccceEEEE
Confidence            589999997   7799999999999999 888874321  1 111        22222       223334456788876


Q ss_pred             eccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEe
Q 021819           87 VASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVT  129 (307)
Q Consensus        87 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~i  129 (307)
                      +...                  ..+..+++.|.+.|++.+++-
T Consensus        63 ~vp~------------------~~~~~~l~~~~~~g~k~v~~~   87 (116)
T d1y81a1          63 VVPP------------------KVGLQVAKEAVEAGFKKLWFQ   87 (116)
T ss_dssp             CSCH------------------HHHHHHHHHHHHTTCCEEEEC
T ss_pred             EeCH------------------HHHHHHHHHHHhcCCceEEec
Confidence            6322                  124567778888888876553

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.21  E-value=0.066  Score=33.41  Aligned_cols=34  Identities=24%  Similarity=0.307  Sum_probs=29.6

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (307)
                      ||+|.|.| +|.+|+-++..-..-|. ++..++-++
T Consensus         1 ~k~vgIlG-~GQLgrMl~~Aa~~LG~-~v~vldp~~   34 (78)
T d3etja2           1 MKQVCVLG-NGQLGRMLRQAGEPLGI-AVWPVGLDA   34 (78)
T ss_dssp             CEEEEEEB-CSHHHHHHHHHHGGGTE-EEEEECTTS
T ss_pred             CCEEEEEc-CCHHHHHHHHHHHHcCC-EEEEEcCCC
Confidence            57999999 49999999999989999 888887644

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=94.20  E-value=0.051  Score=38.29  Aligned_cols=86  Identities=16%  Similarity=0.159  Sum_probs=57.2

Q ss_pred             CCcEEEEeCCc---hhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEE
Q 021819            8 EEETVCVTGAN---GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGV   84 (307)
Q Consensus         8 ~~~~ilItGat---G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~v   84 (307)
                      +.++|.|.|+|   +-.|..+++.|.+.|+ +|+.+..+.  . ...        +...       ..++.++-..+|.+
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~-~v~pVnP~~--~-~i~--------G~~~-------~~sl~dlp~~iD~v   78 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGY-DVYPVNPKY--E-EVL--------GRKC-------YPSVLDIPDKIEVV   78 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTC-EEEEECTTC--S-EET--------TEEC-------BSSGGGCSSCCSEE
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCC-EEEEECCcc--c-ccC--------CCcc-------cccccccCccceEE
Confidence            35799999998   7899999999999999 888874321  1 111        2221       12233444567887


Q ss_pred             EEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCcEEEEec
Q 021819           85 FHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVRRVVVTS  130 (307)
Q Consensus        85 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iS  130 (307)
                      +-+...                  .....+++.|.+.|++.+++.+
T Consensus        79 ~i~vp~------------------~~~~~~~~e~~~~g~k~v~~~~  106 (139)
T d2d59a1          79 DLFVKP------------------KLTMEYVEQAIKKGAKVVWFQY  106 (139)
T ss_dssp             EECSCH------------------HHHHHHHHHHHHHTCSEEEECT
T ss_pred             EEEeCH------------------HHHHHHHHHHHHhCCCEEEEec
Confidence            776332                  2355678888888888776644

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=94.18  E-value=0.028  Score=38.75  Aligned_cols=37  Identities=19%  Similarity=0.237  Sum_probs=32.2

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS   47 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~   47 (307)
                      .++++|.|| |+||-.++..|.+.|. +|+.+.|++...
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~-~Vtvi~~~~~~l   61 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGS-EVTVVEFASEIV   61 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTC-EEEEECSSSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCC-eEEEEEEccccC
Confidence            468999995 9999999999999999 999998866543

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=94.17  E-value=0.027  Score=40.32  Aligned_cols=34  Identities=21%  Similarity=0.232  Sum_probs=27.8

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCC-CCeEEEEeC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNN-YTSINATVF   42 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g-~~~V~~~~r   42 (307)
                      ||+|.|.|+||.||....+-+.+.. ..+|.++.-
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa   35 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVA   35 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEE
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEe
Confidence            6799999999999999999888763 227777754

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.95  E-value=0.013  Score=45.26  Aligned_cols=74  Identities=20%  Similarity=0.109  Sum_probs=48.3

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      ++++++|+|-| .|.+|+++++.|.+.|. .|++.+.+......+....     +..     ..+.+++  +-..||+++
T Consensus        36 ~l~g~~v~IqG-~GnVG~~~a~~L~~~Ga-kvv~~d~~~~~~~~~~~~~-----g~~-----~~~~~~~--~~~~cDIl~  101 (230)
T d1leha1          36 SLEGLAVSVQG-LGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEE-----GAD-----AVAPNAI--YGVTCDIFA  101 (230)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHH-----CCE-----ECCGGGT--TTCCCSEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCC-EEEeecccHHHHHHHHHhc-----CCc-----ccCCccc--ccccccEec
Confidence            46789999999 69999999999999999 8887765433322222110     111     2233322  123799999


Q ss_pred             EeccCCCC
Q 021819           86 HVASPCTL   93 (307)
Q Consensus        86 ~~a~~~~~   93 (307)
                      -||-....
T Consensus       102 PcA~~~~I  109 (230)
T d1leha1         102 PCALGAVL  109 (230)
T ss_dssp             ECSCSCCB
T ss_pred             cccccccc
Confidence            99876443

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.93  E-value=0.031  Score=41.50  Aligned_cols=37  Identities=16%  Similarity=0.080  Sum_probs=31.8

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   46 (307)
                      +|||+|.|| |..|...+..|.+.|+++|+++.+++..
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~~   40 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEYV   40 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCcc
Confidence            579999996 9999999999999998558888886543

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=93.91  E-value=0.11  Score=41.18  Aligned_cols=35  Identities=20%  Similarity=0.091  Sum_probs=29.9

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeC
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF   42 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r   42 (307)
                      .+++++|+|-| .|.+|+++++.|.+.|. .|+++.-
T Consensus        33 ~L~gktvaIqG-fGnVG~~~A~~L~e~Ga-kvv~vsD   67 (293)
T d1hwxa1          33 GFGDKTFAVQG-FGNVGLHSMRYLHRFGA-KCVAVGE   67 (293)
T ss_dssp             SSTTCEEEEEC-CSHHHHHHHHHHHHTTC-EEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCC-EEEEEEc
Confidence            35678999999 59999999999999999 7777643

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=93.82  E-value=0.0019  Score=47.96  Aligned_cols=115  Identities=9%  Similarity=0.023  Sum_probs=62.4

Q ss_pred             cEEEEeCCchhhHHH--HHHHHHHC-C--CCeEEEEeCCCCCCcccccC----CCCCCCceEEEEcccCChhHHHHHhcC
Q 021819           10 ETVCVTGANGFIGTW--LVKTLLDN-N--YTSINATVFPGSDSSHLFAL----PGAGDANLRVFEADVLDSGAVSRAVEG   80 (307)
Q Consensus        10 ~~ilItGatG~iG~~--l~~~L~~~-g--~~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~i~~D~~d~~~~~~~~~~   80 (307)
                      +||.|.|| |.+|..  ++..|+.. +  ..+++.++.++++.+.....    ........++.     ...+.++++++
T Consensus         3 mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~-----~~td~~eaL~d   76 (171)
T d1obba1           3 VKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFE-----KTMNLDDVIID   76 (171)
T ss_dssp             CEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEE-----EESCHHHHHTT
T ss_pred             cEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEE-----EeCChhhcccC
Confidence            49999996 888865  34445533 2  13899999876543321110    00000022222     12235678899


Q ss_pred             ccEEEEeccCCCCCCCC----------------Ch--------hhhhhhhhHHHHHHHHHHHHhcCCcE-EEEec
Q 021819           81 CKGVFHVASPCTLEDPV----------------DP--------EKELILPAVQGTLNVLEAAKRFGVRR-VVVTS  130 (307)
Q Consensus        81 ~d~vi~~a~~~~~~~~~----------------~~--------~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~iS  130 (307)
                      +|+|++.++........                ..        .......|+.-.+.+++.+++..-+. ++.+|
T Consensus        77 ad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~~i~~T  151 (171)
T d1obba1          77 ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAA  151 (171)
T ss_dssp             CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeEEEEEC
Confidence            99999997753210000                00        00112347778888888888876444 44444

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=93.78  E-value=0.041  Score=38.02  Aligned_cols=36  Identities=11%  Similarity=0.123  Sum_probs=31.4

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   46 (307)
                      .++++|.|| |+||-.++..|.+.|. +|+.+.+++.-
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~-~Vtive~~~~i   61 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGS-RLDVVEMMDGL   61 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTC-EEEEECSSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCC-EEEEEEeeccc
Confidence            468999995 9999999999999999 99999886543

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=93.60  E-value=0.037  Score=39.54  Aligned_cols=34  Identities=32%  Similarity=0.368  Sum_probs=28.3

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHC--CCCeEEEEeCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDN--NYTSINATVFP   43 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~--g~~~V~~~~r~   43 (307)
                      +|+|.|.|+||.||....+-+.+.  .+ +|+++.-.
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~lsa~   37 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRY-QVIALTAN   37 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGE-EEEEEEES
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCc-EEEEEEeC
Confidence            689999999999999999998775  35 77777553

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=93.49  E-value=0.046  Score=44.34  Aligned_cols=38  Identities=16%  Similarity=0.288  Sum_probs=32.1

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS   47 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~   47 (307)
                      ++|+|+|.|| |.-|...|..|.++|+ +|.++.+++.--
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~-~V~viEk~~~iG   38 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGH-QVHIIDQRDHIG   38 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTC-EEEEEESSSSSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCC-CEEEEECCCCCc
Confidence            3679999995 9999999999999999 899888765443

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=93.46  E-value=0.025  Score=40.91  Aligned_cols=70  Identities=20%  Similarity=0.280  Sum_probs=39.2

Q ss_pred             CcEEEEeCCchhhHHHH-HHHHHHCCCCeEEEEe-CCCCCC--cccccCCCCCCCceEEEEcccCChhHHHHH--hcCcc
Q 021819            9 EETVCVTGANGFIGTWL-VKTLLDNNYTSINATV-FPGSDS--SHLFALPGAGDANLRVFEADVLDSGAVSRA--VEGCK   82 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l-~~~L~~~g~~~V~~~~-r~~~~~--~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~--~~~~d   82 (307)
                      ..|+.|.| +|.||+.+ .+.|.+....+++++. |+....  ...+..      ++....   .+.+++.+.  +.++|
T Consensus         4 kirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~------~i~~~~---~~~d~l~~~~~~~~iD   73 (157)
T d1nvmb1           4 KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRM------GVTTTY---AGVEGLIKLPEFADID   73 (157)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHT------TCCEES---SHHHHHHHSGGGGGEE
T ss_pred             CcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhc------CCcccc---cceeeeeecccccccC
Confidence            45899999 89999975 4555555544777764 443321  122222      233222   123444443  24789


Q ss_pred             EEEEec
Q 021819           83 GVFHVA   88 (307)
Q Consensus        83 ~vi~~a   88 (307)
                      +||.+.
T Consensus        74 iVf~AT   79 (157)
T d1nvmb1          74 FVFDAT   79 (157)
T ss_dssp             EEEECS
T ss_pred             EEEEcC
Confidence            999863

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=93.42  E-value=0.21  Score=34.14  Aligned_cols=75  Identities=12%  Similarity=0.114  Sum_probs=50.9

Q ss_pred             CCcEEEEeCC----------chhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHH
Q 021819            8 EEETVCVTGA----------NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRA   77 (307)
Q Consensus         8 ~~~~ilItGa----------tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~   77 (307)
                      ..|+|+|.|+          --+.+.+.++.|.+.|+ +++.+..++.....-...       ..-+...-...+++.++
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~-~~iliN~NP~TVstd~d~-------aD~lYfePlt~e~v~~I   77 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGY-RVINVNSNPATIMTDPEM-------ADATYIEPIHWEVVRKI   77 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTC-EEEEECSCTTCGGGCGGG-------SSEEECSCCCHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCC-eEEEecCchHhhhcChhh-------cceeeeecCCHHHHHHH
Confidence            3579999998          45789999999999999 888777666543221111       12233444566778887


Q ss_pred             hc--CccEEEEeccC
Q 021819           78 VE--GCKGVFHVASP   90 (307)
Q Consensus        78 ~~--~~d~vi~~a~~   90 (307)
                      ++  ++|.|+-..|.
T Consensus        78 i~~E~pd~il~~~GG   92 (127)
T d1a9xa3          78 IEKERPDAVLPTMGG   92 (127)
T ss_dssp             HHHHCCSEEECSSSH
T ss_pred             HHHhCcCCeEEEeee
Confidence            75  78998865443

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=93.08  E-value=0.041  Score=43.28  Aligned_cols=31  Identities=23%  Similarity=0.218  Sum_probs=28.2

Q ss_pred             EEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC
Q 021819           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (307)
Q Consensus        12 ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (307)
                      |+|.|| |.+|..++.+|.++|. +|+++.+..
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~-~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENK-NTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            999995 9999999999999999 899998854

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.07  E-value=0.17  Score=36.91  Aligned_cols=75  Identities=16%  Similarity=0.164  Sum_probs=44.7

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC--cccccCCCCCCCceEEEEcccC-----------ChhHHHH
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS--SHLFALPGAGDANLRVFEADVL-----------DSGAVSR   76 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~i~~D~~-----------d~~~~~~   76 (307)
                      +||.|-| .|-||+.+++.|.++..-+|+++.-..+..  ..+...      ++..+..+-.           ....+.+
T Consensus         3 irIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (172)
T d2czca2           3 VKVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKEL------GIPVYAASEEFIPRFEKEGFEVAGTLND   75 (172)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHT------TCCEEESSGGGHHHHHHHTCCCSCBHHH
T ss_pred             EEEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhc------CceeecccccceeeecccCccccchhhh
Confidence            4899999 599999999999887533676654322211  112111      1222222211           1123445


Q ss_pred             HhcCccEEEEeccCC
Q 021819           77 AVEGCKGVFHVASPC   91 (307)
Q Consensus        77 ~~~~~d~vi~~a~~~   91 (307)
                      +.+++|+|+-|.|..
T Consensus        76 ~~~~vDvViEcTG~f   90 (172)
T d2czca2          76 LLEKVDIIVDATPGG   90 (172)
T ss_dssp             HHTTCSEEEECCSTT
T ss_pred             hhccCCEEEECCCCC
Confidence            566899999998874

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=92.90  E-value=0.26  Score=38.05  Aligned_cols=35  Identities=26%  Similarity=0.291  Sum_probs=30.3

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeC
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVF   42 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r   42 (307)
                      ++++++|+|-| .|.+|+++++.|.+.|. +|++++-
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Ga-kvv~vsD   62 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGA-KVIAVSD   62 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTC-EEEEEEC
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCC-eEEEeec
Confidence            35689999998 79999999999999999 7776654

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=92.82  E-value=0.071  Score=38.34  Aligned_cols=70  Identities=11%  Similarity=0.081  Sum_probs=50.8

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      +.+|+++|.| =|.+|+.+++.|...|. +|+++..+|-.  .++....    +++..        .++++++..|++|.
T Consensus        21 laGk~vvV~G-YG~vGrG~A~~~rg~Ga-~V~V~E~DPi~--alqA~md----Gf~v~--------~~~~a~~~aDi~vT   84 (163)
T d1v8ba1          21 ISGKIVVICG-YGDVGKGCASSMKGLGA-RVYITEIDPIC--AIQAVME----GFNVV--------TLDEIVDKGDFFIT   84 (163)
T ss_dssp             CTTSEEEEEC-CSHHHHHHHHHHHHHTC-EEEEECSCHHH--HHHHHTT----TCEEC--------CHHHHTTTCSEEEE
T ss_pred             ecCCEEEEec-ccccchhHHHHHHhCCC-EEEEEecCchh--hHHHHhc----CCccC--------chhHccccCcEEEE
Confidence            5689999999 69999999999999999 89888776532  2221110    33322        35678888999999


Q ss_pred             eccCCC
Q 021819           87 VASPCT   92 (307)
Q Consensus        87 ~a~~~~   92 (307)
                      +.|-.+
T Consensus        85 aTGn~~   90 (163)
T d1v8ba1          85 CTGNVD   90 (163)
T ss_dssp             CCSSSS
T ss_pred             cCCCCc
Confidence            887644

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=92.73  E-value=0.065  Score=38.93  Aligned_cols=35  Identities=17%  Similarity=0.065  Sum_probs=29.2

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPG   44 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~   44 (307)
                      +|||+|.|| |+.|..++..|.+.+. .+|+++.+++
T Consensus         2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            689999996 9999999999999875 2688776644

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=92.64  E-value=0.025  Score=42.44  Aligned_cols=37  Identities=19%  Similarity=0.258  Sum_probs=29.1

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSH   49 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~   49 (307)
                      |||.|.| .|++|..++..| ++|+ +|++++-++...+.
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~-~V~g~Din~~~v~~   37 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQN-EVTIVDILPSKVDK   37 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTS-EEEEECSCHHHHHH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCC-cEEEEECCHHHHHH
Confidence            4788887 799999998755 6799 99999887654433

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=92.50  E-value=0.45  Score=32.07  Aligned_cols=73  Identities=15%  Similarity=0.099  Sum_probs=48.2

Q ss_pred             CcEEEEeCCc----------hhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHh
Q 021819            9 EETVCVTGAN----------GFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAV   78 (307)
Q Consensus         9 ~~~ilItGat----------G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~   78 (307)
                      .++|+|.|+.          -+.+.+.++.|.+.|+ +++.+..++.....-...       ..-+...-...+.+.+++
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~-~~IliN~NPeTVstd~d~-------aD~lYfeplt~e~v~~Ii   75 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGY-ETIMVNCNPETVSTDYDT-------SDRLYFEPVTLEDVLEIV   75 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTC-EEEEECCCTTSSTTSTTS-------SSEEECCCCSHHHHHHHH
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCC-eEEEEecChhhhhcChhh-------cCceEEccCCHHHHHHHH
Confidence            5699999983          4789999999999999 888777665543321111       112233334556777766


Q ss_pred             c--CccEEEEecc
Q 021819           79 E--GCKGVFHVAS   89 (307)
Q Consensus        79 ~--~~d~vi~~a~   89 (307)
                      +  ++|.|+-.-|
T Consensus        76 ~~E~p~~ii~~~G   88 (121)
T d1a9xa4          76 RIEKPKGVIVQYG   88 (121)
T ss_dssp             HHHCCSEEECSSS
T ss_pred             HHhCCCEEEeehh
Confidence            4  7888876544

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=92.29  E-value=0.12  Score=37.95  Aligned_cols=38  Identities=13%  Similarity=0.077  Sum_probs=33.0

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   46 (307)
                      .+.|+|+|.|| |..|..-+..|.++|+ +|+.+.+.+..
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~-~Vtl~E~~~~~   78 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAARGH-QVTLFDAHSEI   78 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTTTC-EEEEEESSSSS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhhcc-ceEEEeccCcc
Confidence            45689999995 9999999999999999 99999886543

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=92.15  E-value=0.0044  Score=45.59  Aligned_cols=78  Identities=12%  Similarity=0.050  Sum_probs=43.1

Q ss_pred             CcEEEEeCCchhhHHH-HHHHHHHC--C--CCeEEEEeCCCCCCcccccC----CCCCCCceEEEEcccCChhHHHHHhc
Q 021819            9 EETVCVTGANGFIGTW-LVKTLLDN--N--YTSINATVFPGSDSSHLFAL----PGAGDANLRVFEADVLDSGAVSRAVE   79 (307)
Q Consensus         9 ~~~ilItGatG~iG~~-l~~~L~~~--g--~~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~i~~D~~d~~~~~~~~~   79 (307)
                      ..||.|.|| |.+|.. ++..|+..  .  ..+|+..+.++++.+.....    ........+...     ..+..+.++
T Consensus         3 ~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~eal~   76 (167)
T d1u8xx1           3 SFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAA-----TTDPEEAFT   76 (167)
T ss_dssp             CEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEE-----ESCHHHHHS
T ss_pred             CceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEe-----cCChhhccC
Confidence            458999998 555654 44555543  1  13788888876554321111    000000122221     123567789


Q ss_pred             CccEEEEeccCCC
Q 021819           80 GCKGVFHVASPCT   92 (307)
Q Consensus        80 ~~d~vi~~a~~~~   92 (307)
                      ++|+||..++...
T Consensus        77 ~AD~Vvitag~~~   89 (167)
T d1u8xx1          77 DVDFVMAHIRVGK   89 (167)
T ss_dssp             SCSEEEECCCTTH
T ss_pred             CCCEEEECCCcCC
Confidence            9999999998744

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=92.08  E-value=0.098  Score=40.55  Aligned_cols=35  Identities=14%  Similarity=0.169  Sum_probs=31.0

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~   45 (307)
                      .+||+|.|| |.-|..++..|.++|+ +|+++.|++.
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~-~v~v~Er~~~   38 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGV-DVDVYERSPQ   38 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCC-CEEEEeCCCC
Confidence            458999996 9999999999999999 9999987654

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=91.69  E-value=0.1  Score=42.42  Aligned_cols=37  Identities=24%  Similarity=0.267  Sum_probs=30.3

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCCC
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPGS   45 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~~   45 (307)
                      +||+|+|.|| |.-|...+..|+++|. .+|+++.|++.
T Consensus         3 ~~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           3 TIRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            3579999995 9999999999998763 38999888653

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.49  E-value=0.33  Score=38.48  Aligned_cols=28  Identities=18%  Similarity=0.171  Sum_probs=23.7

Q ss_pred             CchhhHHHHHHHHHHCCCCeEEEEeCCCC
Q 021819           17 ANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (307)
Q Consensus        17 atG~iG~~l~~~L~~~g~~~V~~~~r~~~   45 (307)
                      .||-.|.+|++.++.+|+ +|+.+.+..+
T Consensus        44 SSGk~G~alA~~~~~~Ga-~V~li~g~~s   71 (290)
T d1p9oa_          44 SSGRRGATSAEAFLAAGY-GVLFLYRARS   71 (290)
T ss_dssp             CCCHHHHHHHHHHHHTTC-EEEEEEETTS
T ss_pred             CchHHHHHHHHHHHHcCC-EEEEEecCCc
Confidence            358999999999999999 8988876543

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=91.45  E-value=0.1  Score=41.16  Aligned_cols=34  Identities=24%  Similarity=0.239  Sum_probs=30.1

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (307)
                      +|||+|.|| |.-|...+..|.+.|+ +|.++.+++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~-~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGL-NVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSC-EEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence            479999995 9999999999999999 899997754

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=91.13  E-value=0.1  Score=41.59  Aligned_cols=33  Identities=24%  Similarity=0.422  Sum_probs=28.9

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (307)
                      +|+|.|| |.+|..++.+|.++|.++|.++.++.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            6999996 99999999999999975799998864

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=90.98  E-value=0.047  Score=40.20  Aligned_cols=41  Identities=17%  Similarity=0.171  Sum_probs=32.2

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccc
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHL   50 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~   50 (307)
                      .++|+|+|.|+ |+.+++++..|.+.|  +|+.+.|+.++.+.+
T Consensus        16 ~~~k~vlIlGa-GG~arai~~aL~~~~--~i~I~nR~~~ka~~l   56 (177)
T d1nvta1          16 VKDKNIVIYGA-GGAARAVAFELAKDN--NIIIANRTVEKAEAL   56 (177)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHTSSS--EEEEECSSHHHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHcccc--ceeeehhhhhHHHHH
Confidence            56889999995 889999999985444  799999976665443

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=90.66  E-value=0.75  Score=33.94  Aligned_cols=93  Identities=14%  Similarity=0.140  Sum_probs=60.3

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCC--eEEEEeCCCCCCcccccCCCCCCCceEEEEc-cc------------------C
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYT--SINATVFPGSDSSHLFALPGAGDANLRVFEA-DV------------------L   69 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~-D~------------------~   69 (307)
                      ||.|.|. |+-|..++..|.+.+..  +.++++.+.   +.+.....    ..++..+ ++                  .
T Consensus         2 kI~viGv-GGaG~n~v~~l~~~~~~~v~~iainTD~---~~L~~~~a----~~ki~iG~~~t~G~G~g~~p~~g~~aa~e   73 (194)
T d1w5fa1           2 KIKVIGV-GGAGNNAINRMIEIGIHGVEFVAVNTDL---QVLEASNA----DVKIQIGENITRGLGAGGRPEIGEQAALE   73 (194)
T ss_dssp             CEEEEEE-HHHHHHHHHHHHHHCCTTEEEEEEESCH---HHHHTCCC----SEEEECCTTTTTTSCCTTCHHHHHHHHHH
T ss_pred             eEEEEEe-CchHHHHHHHHHHcCCCceEEEEEcCCH---HHHhcCCc----ceEEecccccCCCcccccCchhhHhHHHH
Confidence            6888884 89999999999988753  345544422   22222111    1122221 11                  2


Q ss_pred             ChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCC
Q 021819           70 DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV  123 (307)
Q Consensus        70 d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  123 (307)
                      +.+.+.+.++++|.||-+||....            +-..++-.+.+.|++.+.
T Consensus        74 ~~~~I~~~l~~~d~vfi~AGlGGg------------TGtgaapviA~~ake~g~  115 (194)
T d1w5fa1          74 SEEKIREVLQDTHMVFITAGFGGG------------TGTGASPVIAKIAKEMGI  115 (194)
T ss_dssp             THHHHHHHTTTCSEEEEEEETTSS------------HHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHhcCCCeEEEEEecCCC------------cccchHHHHHHHHHHcCC
Confidence            346788888899999999998664            224566788999999885

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.63  E-value=0.082  Score=40.57  Aligned_cols=79  Identities=14%  Similarity=0.094  Sum_probs=57.5

Q ss_pred             cCCcEEEEeCC-chhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            7 KEEETVCVTGA-NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         7 ~~~~~ilItGa-tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      ..+++||=.|+ +|+.-++|++..-..|  .|++++.++...+.+........ ++..+..|..+++........+|+|+
T Consensus        72 ~pG~~VLDlGaGsG~~t~~la~~VG~~G--~V~aVD~s~~~l~~a~~~a~~~~-~~~~i~~d~~~~~~~~~~~~~vD~i~  148 (227)
T d1g8aa_          72 KPGKSVLYLGIASGTTASHVSDIVGWEG--KIFGIEFSPRVLRELVPIVEERR-NIVPILGDATKPEEYRALVPKVDVIF  148 (227)
T ss_dssp             CTTCEEEEETTTSTTHHHHHHHHHCTTS--EEEEEESCHHHHHHHHHHHSSCT-TEEEEECCTTCGGGGTTTCCCEEEEE
T ss_pred             CCCCEEEEeccCCCHHHHHHHHHhCCCC--EEEEEeCcHHHHHHHHHHHHhcC-CceEEEEECCCcccccccccceEEEE
Confidence            45778988887 8888888888653444  59999998766555444322222 68889999998887776677889998


Q ss_pred             Eec
Q 021819           86 HVA   88 (307)
Q Consensus        86 ~~a   88 (307)
                      +..
T Consensus       149 ~d~  151 (227)
T d1g8aa_         149 EDV  151 (227)
T ss_dssp             ECC
T ss_pred             EEc
Confidence            753

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=90.61  E-value=0.37  Score=35.98  Aligned_cols=76  Identities=17%  Similarity=0.180  Sum_probs=44.1

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCc------ccccCCCCCCCceEEEE-cccCChhHHHHHhc-Cc
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSS------HLFALPGAGDANLRVFE-ADVLDSGAVSRAVE-GC   81 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~------~~~~~~~~~~~~~~~i~-~D~~d~~~~~~~~~-~~   81 (307)
                      |||++.| ++..|..+.+.|++.|+ +|.++...+++..      .+.......  ++.++. .++.+++.++.+.+ ++
T Consensus         1 Mkiv~~~-~~~~g~~~l~~L~~~g~-~I~~Vvt~~~~~~~~~~~~~~~~~a~~~--~i~~~~~~~~~~~~~~~~i~~~~~   76 (203)
T d2blna2           1 MKTVVFA-YHDMGCLGIEALLAAGY-EISAIFTHTDNPGEKAFYGSVARLAAER--GIPVYAPDNVNHPLWVERIAQLSP   76 (203)
T ss_dssp             CEEEEEE-CHHHHHHHHHHHHHTTC-EEEEEECCCC------CCCCHHHHHHHH--TCCEECCSCCCSHHHHHHHHHTCC
T ss_pred             CeEEEEe-cCHHHHHHHHHHHHCCC-CEEEEEcCCCCCCcccccCHHHHHHHHc--CCcceecccccchhhhhhhhhhcc
Confidence            3677776 56689999999999999 8877664332210      011000000  344443 45656554443332 78


Q ss_pred             cEEEEecc
Q 021819           82 KGVFHVAS   89 (307)
Q Consensus        82 d~vi~~a~   89 (307)
                      |++|.+..
T Consensus        77 Dlii~~g~   84 (203)
T d2blna2          77 DVIFSFYY   84 (203)
T ss_dssp             SEEEEESC
T ss_pred             cceeeeec
Confidence            99888754

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=90.52  E-value=0.12  Score=41.35  Aligned_cols=36  Identities=14%  Similarity=0.081  Sum_probs=30.5

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   46 (307)
                      |..|+|.|| |.-|..+|+.|.++|+ +|.++.+++..
T Consensus         1 M~dv~IIGa-G~sGl~~A~~L~~~g~-~V~iiEk~~~i   36 (298)
T d1i8ta1           1 MYDYIIVGS-GLFGAVCANELKKLNK-KVLVIEKRNHI   36 (298)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHGGGTC-CEEEECSSSSS
T ss_pred             CccEEEECC-cHHHHHHHHHHHhCCC-cEEEEECCCCc
Confidence            457999995 9999999999999999 88888775543

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=90.38  E-value=0.47  Score=34.26  Aligned_cols=119  Identities=13%  Similarity=0.067  Sum_probs=61.0

Q ss_pred             cEEEEeCC-chhhHHHHHHHHHHCC---CCeEEEEeCCCCC--CcccccCCCC--CCCceEEEEcccCChhHHHHHhcCc
Q 021819           10 ETVCVTGA-NGFIGTWLVKTLLDNN---YTSINATVFPGSD--SSHLFALPGA--GDANLRVFEADVLDSGAVSRAVEGC   81 (307)
Q Consensus        10 ~~ilItGa-tG~iG~~l~~~L~~~g---~~~V~~~~r~~~~--~~~~~~~~~~--~~~~~~~i~~D~~d~~~~~~~~~~~   81 (307)
                      +||.|.|| +.+.+..++..+....   ..+++.++.++..  .+.+......  ...+...-...-+|   ..+.++++
T Consensus         2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td---~~~al~ga   78 (169)
T d1s6ya1           2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLD---RRRALDGA   78 (169)
T ss_dssp             EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESC---HHHHHTTC
T ss_pred             cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCC---chhhcCCC
Confidence            48889996 4455556655555432   1378888876533  2211110000  00011111112233   34668899


Q ss_pred             cEEEEeccCCCCCCCCCh------------------hhhhhhhhHHHHHHHHHHHHhcCCcEEEEecC
Q 021819           82 KGVFHVASPCTLEDPVDP------------------EKELILPAVQGTLNVLEAAKRFGVRRVVVTSS  131 (307)
Q Consensus        82 d~vi~~a~~~~~~~~~~~------------------~~~~~~~n~~~~~~l~~~~~~~~~~~~v~iSS  131 (307)
                      |+||.+|+.........+                  .......|+...+.+++.+.+..-..++.+-|
T Consensus        79 DvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~vt  146 (169)
T d1s6ya1          79 DFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFT  146 (169)
T ss_dssp             SEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEEeC
Confidence            999999987542100000                  01122356777778888888876555555444

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.11  E-value=0.69  Score=35.39  Aligned_cols=34  Identities=21%  Similarity=0.345  Sum_probs=28.1

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHC-CCCeEEEEeC
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDN-NYTSINATVF   42 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~-g~~~V~~~~r   42 (307)
                      +++++|+|-|- |.+|+++++.|.+. |. .|+++.-
T Consensus        30 l~g~~v~IqGf-GnVG~~~a~~L~~~~G~-kvv~vsD   64 (239)
T d1gtma1          30 LKGKTIAIQGY-GNAGYYLAKIMSEDFGM-KVVAVSD   64 (239)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCC-EEEEEEC
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHhcCc-ceeeccc
Confidence            56899999995 99999999999865 88 7776643

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=90.11  E-value=0.18  Score=36.69  Aligned_cols=32  Identities=19%  Similarity=0.342  Sum_probs=25.9

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVF   42 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r   42 (307)
                      .++|+|.|| |++|-.++..|.+.|. +|..+.+
T Consensus         3 ~~~VvIIGg-G~~G~e~A~~l~~~g~-~v~v~~~   34 (185)
T d1q1ra1           3 NDNVVIVGT-GLAGVEVAFGLRASGW-EGNIRLV   34 (185)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEE
T ss_pred             CCCEEEECC-cHHHHHHHHHHHHcCC-ceEEEEe
Confidence            568999995 9999999999999998 5544433

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=89.99  E-value=0.23  Score=37.94  Aligned_cols=38  Identities=24%  Similarity=0.407  Sum_probs=32.4

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCC
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   46 (307)
                      ...++|+|.|| |..|...+..|.++|+ +|+.+.+++..
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~-~v~l~E~~~~~   84 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGY-TVHLTDTAEKI   84 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTC-EEEEECSSSST
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhcc-ceeeEeecccc
Confidence            35689999995 9999999999999999 89998775533

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=89.90  E-value=0.93  Score=33.85  Aligned_cols=96  Identities=15%  Similarity=0.148  Sum_probs=61.2

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCC--eEEEEeCCCCCCcccccCCCCCCCceEEEEcc-c-----------------
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYT--SINATVFPGSDSSHLFALPGAGDANLRVFEAD-V-----------------   68 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D-~-----------------   68 (307)
                      ..+|.|.| -|+-|..++..|.+.|..  +.++++.+.   +.+.....    ..++..+. +                 
T Consensus        15 ~~ki~ViG-vGGaG~n~v~~l~~~~~~~v~~iainTD~---~~L~~~~~----~~ki~ig~~~t~g~Gag~~p~~g~~aa   86 (209)
T d2vapa1          15 KAKITVVG-CGGAGNNTITRLKMEGIEGAKTVAINTDA---QQLIRTKA----DKKILIGKKLTRGLGAGGNPKIGEEAA   86 (209)
T ss_dssp             CCCEEEEE-EHHHHHHHHHHHHHHTCTTEEEEEEESBH---HHHHTSCC----SEEEECCTTTTTTBCCTTCHHHHHHHH
T ss_pred             CCcEEEEE-eCChHHHHHHHHHHcCCCceEEEEEeCCH---HHHhcCCc----chhcccccccccccccccchHHHHHHH
Confidence            45899999 499999999999988753  344544422   22222110    11111111 1                 


Q ss_pred             -CChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc
Q 021819           69 -LDSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR  124 (307)
Q Consensus        69 -~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  124 (307)
                       .+.+.+.+.++++|.||-+||....            +-..++-.+.+.+++.+.-
T Consensus        87 ~e~~~~I~~~l~~~d~vfi~AGlGGG------------TGsgaapvia~~ake~g~l  131 (209)
T d2vapa1          87 KESAEEIKAAIQDSDMVFITCGLGGG------------TGTGSAPVVAEISKKIGAL  131 (209)
T ss_dssp             HHTHHHHHHHHTTCSEEEEEEETTSS------------HHHHHHHHHHHHHHHTTCE
T ss_pred             HHHHHHHHHhccCCCEEEEEEeCCCC------------ccccHHHHHHHHHHHcCCc
Confidence             2346788888999999999998664            2244566788999998753

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.65  E-value=0.13  Score=40.64  Aligned_cols=32  Identities=22%  Similarity=0.116  Sum_probs=29.0

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (307)
                      +|+|.|| |-.|..++..|.+.|. +|.++.+++
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~-~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGI-DNVILERQT   35 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTC-CEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            6999996 8999999999999999 899998764

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=89.00  E-value=0.18  Score=39.57  Aligned_cols=33  Identities=18%  Similarity=0.153  Sum_probs=29.2

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (307)
                      |+|+|.|| |.-|...+..|.++|+ +|+++.+++
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~-~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGT-DAVLLESSA   33 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTC-CEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCC-CEEEEecCC
Confidence            37999996 9999999999999999 899987754

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=88.96  E-value=0.33  Score=34.48  Aligned_cols=35  Identities=20%  Similarity=0.084  Sum_probs=29.9

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (307)
                      .++|+|.|| |..|.-.+..+++.|...|+.+.|++
T Consensus        45 ~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          45 RGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            468999985 99999999999999987788887754

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=88.92  E-value=0.22  Score=36.87  Aligned_cols=34  Identities=24%  Similarity=0.084  Sum_probs=27.2

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCC-CeEEEEeCCC
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNY-TSINATVFPG   44 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~-~~V~~~~r~~   44 (307)
                      |||+|.|| |++|..++..|.+.+. .+|+.+.|.+
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            48999996 8999999999988743 2788777654

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.92  E-value=0.9  Score=34.61  Aligned_cols=34  Identities=21%  Similarity=0.292  Sum_probs=28.1

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHH-CCCCeEEEEe
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLD-NNYTSINATV   41 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~-~g~~~V~~~~   41 (307)
                      +.++++|+|-| .|.+|+++++.|.+ .|. .|++++
T Consensus        28 ~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga-~vv~vs   62 (234)
T d1b26a1          28 DPKKATVAVQG-FGNVGQFAALLISQELGS-KVVAVS   62 (234)
T ss_dssp             CTTTCEEEEEC-CSHHHHHHHHHHHHHHCC-EEEEEE
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHhcCC-ceEEee
Confidence            35688999998 79999999999975 599 777654

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=88.80  E-value=0.22  Score=38.93  Aligned_cols=31  Identities=23%  Similarity=0.072  Sum_probs=27.7

Q ss_pred             EEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC
Q 021819           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (307)
Q Consensus        12 ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (307)
                      |+|.|| |..|..++.+|.++|. +|+++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~-~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGV-KTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTC-CEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            789995 9999999999999999 898888753

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=88.76  E-value=0.23  Score=39.58  Aligned_cols=35  Identities=17%  Similarity=0.209  Sum_probs=30.7

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (307)
                      +.|+|+|.|| |.-|...+..|.++|+ +|.++.+++
T Consensus        29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~-~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGA-GMAGLSAAYVLAGAGH-QVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECC-BHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            4579999995 9999999999999999 999997754

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=88.40  E-value=0.37  Score=32.27  Aligned_cols=36  Identities=8%  Similarity=0.068  Sum_probs=28.4

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHH---CCCCeEEEEeCCCCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLD---NNYTSINATVFPGSD   46 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~---~g~~~V~~~~r~~~~   46 (307)
                      .++++|.|| |++|-.++..|.+   .|. +|..+.|.+..
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~-~Vtli~~~~~i   56 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGG-QVDLAYRGDMI   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTC-EEEEEESSSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhccccc-ccceecccccc
Confidence            469999996 9999999986654   377 89988886543

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=88.26  E-value=0.28  Score=37.46  Aligned_cols=78  Identities=14%  Similarity=0.142  Sum_probs=55.4

Q ss_pred             cCCcEEEEeCC-chhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            7 KEEETVCVTGA-NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         7 ~~~~~ilItGa-tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      .++.+||=.|+ +|+.-++|++.. . +. .|++++.++...+.+........ ++..+.+|..++.........+|+++
T Consensus        73 kpG~~VLDlGcGsG~~~~~la~~~-~-~g-~V~aVDiS~~~i~~a~~~a~~~~-ni~~i~~d~~~~~~~~~~~~~v~~i~  148 (230)
T d1g8sa_          73 KRDSKILYLGASAGTTPSHVADIA-D-KG-IVYAIEYAPRIMRELLDACAERE-NIIPILGDANKPQEYANIVEKVDVIY  148 (230)
T ss_dssp             CTTCEEEEESCCSSHHHHHHHHHT-T-TS-EEEEEESCHHHHHHHHHHTTTCT-TEEEEECCTTCGGGGTTTCCCEEEEE
T ss_pred             CCCCEEEEeCEEcCHHHHHHHHhC-C-CC-EEEEEeCcHHHHHHHHHHHhhhc-ccceEEEeeccCcccccccceeEEee
Confidence            45789999997 788888888752 2 23 79999998776655554433333 78889999988877665555667776


Q ss_pred             Eec
Q 021819           86 HVA   88 (307)
Q Consensus        86 ~~a   88 (307)
                      +..
T Consensus       149 ~~~  151 (230)
T d1g8sa_         149 EDV  151 (230)
T ss_dssp             ECC
T ss_pred             ccc
Confidence            653

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=88.16  E-value=0.41  Score=33.81  Aligned_cols=37  Identities=11%  Similarity=0.058  Sum_probs=29.4

Q ss_pred             CcEEEEe-CCchhhHHHHHHHHHHCCCCeEEEEeCCCCC
Q 021819            9 EETVCVT-GANGFIGTWLVKTLLDNNYTSINATVFPGSD   46 (307)
Q Consensus         9 ~~~ilIt-GatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   46 (307)
                      .+.++|. .+.||||..++..|.+.|. +|+.+.+.+..
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~-~Vtlv~~~~~~   76 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGH-EVTIVSGVHLA   76 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTC-EEEEEESSCTT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcc
Confidence            4455554 3569999999999999999 99999886533

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.37  E-value=0.39  Score=38.25  Aligned_cols=35  Identities=17%  Similarity=0.200  Sum_probs=29.8

Q ss_pred             cCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCC
Q 021819            7 KEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP   43 (307)
Q Consensus         7 ~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~   43 (307)
                      ++.+||+|.|| |.-|-.-+..|.++|+ +|.++-.+
T Consensus         3 ~~~~kViVIGa-G~aGL~aA~~L~~~G~-~V~VlEa~   37 (449)
T d2dw4a2           3 KKTGKVIIIGS-GVSGLAAARQLQSFGM-DVTLLEAR   37 (449)
T ss_dssp             SCCCEEEEECC-BHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHhCCC-CEEEEeCC
Confidence            34568999995 9999999999999999 89888554

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=87.32  E-value=0.31  Score=37.29  Aligned_cols=33  Identities=27%  Similarity=0.266  Sum_probs=28.5

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (307)
                      +|+|.|| |.-|...+..|.++|.++|+++.+++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            6999995 99999999999999964698887754

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=87.20  E-value=0.38  Score=32.28  Aligned_cols=35  Identities=14%  Similarity=0.119  Sum_probs=27.3

Q ss_pred             CcEEEEeCCchhhHHHHHHHHHHC---CCCeEEEEeCCCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLLDN---NYTSINATVFPGS   45 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~~~---g~~~V~~~~r~~~   45 (307)
                      .++++|.|| |++|-.++..|.+-   |. +|+.+.|.+.
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~-~Vtli~~~~~   57 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDG-QVTLCYRGEM   57 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTC-EEEEEESSSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCc-EEEEEeccch
Confidence            469999997 99999999766544   45 7988887543

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=86.73  E-value=0.33  Score=37.72  Aligned_cols=34  Identities=18%  Similarity=0.066  Sum_probs=29.6

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEe
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATV   41 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~   41 (307)
                      ++++++|+|-| .|.+|+++++.|.+.|. .|+++.
T Consensus        33 ~l~g~~v~IQG-fGnVG~~~a~~L~e~Ga-kvvavs   66 (255)
T d1bgva1          33 TLVGKTVALAG-FGNVAWGAAKKLAELGA-KAVTLS   66 (255)
T ss_dssp             CSTTCEEEECC-SSHHHHHHHHHHHHHTC-EEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCC-eEEEEe
Confidence            35678999999 69999999999999999 777664

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=86.54  E-value=0.064  Score=41.08  Aligned_cols=24  Identities=29%  Similarity=0.310  Sum_probs=22.2

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCC
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNY   34 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~   34 (307)
                      |||+|.|| |-+|...+.+|+++|+
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~   24 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYH   24 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHT
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCC
Confidence            48999995 9999999999999997

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.53  E-value=0.42  Score=33.09  Aligned_cols=35  Identities=17%  Similarity=0.230  Sum_probs=27.7

Q ss_pred             CcEEEEeCCchhhHHHHHHHHH----HCCCCeEEEEeCCCC
Q 021819            9 EETVCVTGANGFIGTWLVKTLL----DNNYTSINATVFPGS   45 (307)
Q Consensus         9 ~~~ilItGatG~iG~~l~~~L~----~~g~~~V~~~~r~~~   45 (307)
                      .++++|.|| |++|-.++..|.    +.|. +|+.+.+++.
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~-~Vt~i~~~~~   75 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGT-EVIQLFPEKG   75 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTC-EEEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCC-EEEEeccccc
Confidence            568999986 999999998885    3477 8888877543

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.47  E-value=0.35  Score=36.51  Aligned_cols=31  Identities=19%  Similarity=0.088  Sum_probs=27.9

Q ss_pred             EEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC
Q 021819           12 VCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (307)
Q Consensus        12 ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (307)
                      |+|.| +|.-|...|..|.++|. +|.++.+++
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~-~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGK-KVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCC-CEEEEcCCC
Confidence            79999 59999999999999999 899987764

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.19  E-value=0.51  Score=36.45  Aligned_cols=35  Identities=14%  Similarity=0.122  Sum_probs=29.5

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCC
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~   45 (307)
                      .+|+|.|| |.-|..++..|.+.|.+.|.++.+++.
T Consensus         2 ~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           2 IDILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            38999996 999999999999999648888877553

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=85.95  E-value=0.43  Score=33.92  Aligned_cols=31  Identities=26%  Similarity=0.265  Sum_probs=25.6

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG   44 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~   44 (307)
                      ||+|.|| |++|-.++..|. ++. +|+.+.+.+
T Consensus         2 rVvIIGg-G~~G~e~A~~l~-~~~-~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLS-QTY-EVTVIDKEP   32 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHT-TTS-EEEEECSSS
T ss_pred             eEEEECC-cHHHHHHHHHHH-cCC-CEEEEeccc
Confidence            7999996 999999999985 467 888887643

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=85.46  E-value=1.9  Score=31.88  Aligned_cols=79  Identities=14%  Similarity=0.082  Sum_probs=44.1

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCccccc-CCCC------CCCceEEEEcccCChhHHHHHhc--C
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFA-LPGA------GDANLRVFEADVLDSGAVSRAVE--G   80 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~------~~~~~~~i~~D~~d~~~~~~~~~--~   80 (307)
                      |||++.| ++..+..+.+.|+++|+ +|.++...+++...... ....      ...++.....+..+.+...+.++  +
T Consensus         4 mKI~f~G-~~~~~~~~L~~L~~~~~-~i~~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (206)
T d1fmta2           4 LRIIFAG-TPDFAARHLDALLSSGH-NVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVAELQ   81 (206)
T ss_dssp             CEEEEEE-CSHHHHHHHHHHHHTTC-EEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSCSHHHHHHHHHTT
T ss_pred             cEEEEEC-CCHHHHHHHHHHHhCCC-CEEEEEeCCCcccccCccccccchhhhhhccCccccccccccchhhHHHHhhhc
Confidence            4788887 57889999999999999 77776644322111000 0000      00034455544444455555554  6


Q ss_pred             ccEEEEeccC
Q 021819           81 CKGVFHVASP   90 (307)
Q Consensus        81 ~d~vi~~a~~   90 (307)
                      +|+++-+...
T Consensus        82 ~d~~v~~~~~   91 (206)
T d1fmta2          82 ADVMVVVAYG   91 (206)
T ss_dssp             CSEEEEESCC
T ss_pred             ceEEEeeccc
Confidence            7877776543

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=85.38  E-value=0.46  Score=38.51  Aligned_cols=75  Identities=20%  Similarity=0.206  Sum_probs=51.4

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHH-CCCCeEEEEeCCCCCCccccc-CCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLD-NNYTSINATVFPGSDSSHLFA-LPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~-~g~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      .-+++.|.| +|..+..-++.+.+ .+..+|.+.+|++...+.+.. +.. .. ++.+..++     +++++++++|+|+
T Consensus       127 da~~l~iiG-~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~-~~-g~~v~~~~-----s~~eav~~ADIi~  198 (340)
T d1x7da_         127 NARKMALIG-NGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKE-YS-GLTIRRAS-----SVAEAVKGVDIIT  198 (340)
T ss_dssp             TCCEEEEEC-CSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTT-CT-TCEEEECS-----SHHHHHTTCSEEE
T ss_pred             CCceEEEEc-ccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhh-cc-CCCceecC-----CHHHHHhcCCcee
Confidence            346899999 68889988887765 477799999998765443332 221 11 45554443     5778899999999


Q ss_pred             EeccC
Q 021819           86 HVASP   90 (307)
Q Consensus        86 ~~a~~   90 (307)
                      -+.+.
T Consensus       199 t~Tas  203 (340)
T d1x7da_         199 TVTAD  203 (340)
T ss_dssp             ECCCC
T ss_pred             ecccc
Confidence            87643

>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.36  E-value=3.2  Score=30.47  Aligned_cols=93  Identities=20%  Similarity=0.168  Sum_probs=59.4

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCC--eEEEEeCCCCCCcccccCCCCCCCceEEEEcc-c------------------C
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYT--SINATVFPGSDSSHLFALPGAGDANLRVFEAD-V------------------L   69 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D-~------------------~   69 (307)
                      +|-|.| -|+-|..++..|.+.+..  +.++++.+...   +.....    ..++..++ +                  .
T Consensus         3 ~IkViG-vGGaG~n~v~~~~~~~~~~v~~iainTD~~~---L~~~~~----~~ki~iG~~~~~g~G~gg~p~~g~~aa~e   74 (198)
T d1ofua1           3 VIKVIG-VGGGGGNAVNHMAKNNVEGVEFICANTDAQA---LKNIAA----RTVLQLGPGVTKGLGAGANPEVGRQAALE   74 (198)
T ss_dssp             CEEEEE-EHHHHHHHHHHHHHTTCCSEEEEEEESBTGG---GSSCSC----SEEEECCHHHHTTBCCCSCHHHHHHHHHH
T ss_pred             eEEEEE-ECchHHHHHHHHHHcCCCCeEEEEEeCcHHH---HhcCCc----cceeccccccccCCCCCCChHHHHHHHHH
Confidence            466777 489999999999998753  45555443322   221110    11221111 1                  2


Q ss_pred             ChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCC
Q 021819           70 DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGV  123 (307)
Q Consensus        70 d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  123 (307)
                      +.+.+.+.++++|.||-+||....            +-..++-.+++.|++.+.
T Consensus        75 ~~~~I~~~l~~~d~vfi~AGlGGG------------TGtgaapviA~~ake~g~  116 (198)
T d1ofua1          75 DRERISEVLEGADMVFITTGMGGG------------TGTGAAPIIAEVAKEMGI  116 (198)
T ss_dssp             THHHHHHHHTTCSEEEEEEETTSS------------HHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHhCCCCeEEEEecCCCC------------ccccHHHHHHHHHHHcCC
Confidence            456678888999999999998664            223556678999999875

>d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB
species: Escherichia coli [TaxId: 562]

Probab=84.92  E-value=0.84  Score=37.79  Aligned_cols=87  Identities=11%  Similarity=0.114  Sum_probs=54.7

Q ss_pred             CccccccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCC-CCCcccc-cCCCCCCCceEEEEcccCCh---hHHH
Q 021819            1 MASEAEKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPG-SDSSHLF-ALPGAGDANLRVFEADVLDS---GAVS   75 (307)
Q Consensus         1 m~~m~~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~-~~~~~~~-~~~~~~~~~~~~i~~D~~d~---~~~~   75 (307)
                      |+.+..+.+.+|+=.+ ...-|-...+.|.+-|. +|+-+-+.. ....... ......+.+-+.+..|+.++   +.+.
T Consensus         3 ~~~~gPL~GirVld~~-~~~agp~~~~~Lad~GA-eVIkvE~p~~gd~~r~~~~~~~~~n~~K~si~ldl~~~~G~~~~~   80 (402)
T d1xk7a1           3 MPKFGPLAGLRVVFSG-IEIAGPFAGQMFAEWGA-EVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFL   80 (402)
T ss_dssp             CCCCSTTTTCEEEEEC-CSSHHHHHHHHHHHTTC-EEEEEECSSSCCGGGGSSSHHHHHTTTCEEEEECTTSHHHHHHHH
T ss_pred             CCCCcCCCCCEEEEeC-ChhHHHHHHHHHHHhCC-eEEEECCCCCCCccccCCchhHHhCCCCeEEEEeCcCHHHHHHHH
Confidence            3344457787888666 34457777788888899 888876522 1111000 00000122567888999887   4466


Q ss_pred             HHhcCccEEEEecc
Q 021819           76 RAVEGCKGVFHVAS   89 (307)
Q Consensus        76 ~~~~~~d~vi~~a~   89 (307)
                      ++++++|+||++--
T Consensus        81 ~Lv~~aDv~i~n~r   94 (402)
T d1xk7a1          81 KLMETTDIFIEASK   94 (402)
T ss_dssp             HHHTTCSEEEEECS
T ss_pred             HHHhhcCCceeeec
Confidence            78889999999843

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=83.98  E-value=0.13  Score=38.77  Aligned_cols=77  Identities=21%  Similarity=0.198  Sum_probs=53.4

Q ss_pred             cCCcEEEEeCC-chhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEE
Q 021819            7 KEEETVCVTGA-NGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVF   85 (307)
Q Consensus         7 ~~~~~ilItGa-tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi   85 (307)
                      .++.+||=.|+ +|+.=.+|++.. .. . +|++++.++...+.+........ ++.++..|..++......+..+|+++
T Consensus        55 kpg~~VLDlGcG~G~~~~~la~~v-~~-g-~V~gvDis~~~i~~a~~~a~~~~-ni~~i~~d~~~~~~~~~~~~~vd~v~  130 (209)
T d1nt2a_          55 RGDERVLYLGAASGTTVSHLADIV-DE-G-IIYAVEYSAKPFEKLLELVRERN-NIIPLLFDASKPWKYSGIVEKVDLIY  130 (209)
T ss_dssp             CSSCEEEEETCTTSHHHHHHHHHT-TT-S-EEEEECCCHHHHHHHHHHHHHCS-SEEEECSCTTCGGGTTTTCCCEEEEE
T ss_pred             CCCCEEEEeCCcCCHHHHHHHHhc-cC-C-eEEEEeCCHHHHHHHHHHhhccC-CceEEEeeccCccccccccceEEEEE
Confidence            35679999997 666666666543 33 3 79999998766554433221112 78999999999887777777888888


Q ss_pred             Ee
Q 021819           86 HV   87 (307)
Q Consensus        86 ~~   87 (307)
                      |.
T Consensus       131 ~~  132 (209)
T d1nt2a_         131 QD  132 (209)
T ss_dssp             EC
T ss_pred             ec
Confidence            75

>d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=83.73  E-value=4.8  Score=29.45  Aligned_cols=94  Identities=17%  Similarity=0.176  Sum_probs=59.2

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCC--eEEEEeCCCCCCcccccCCCCCCCceEEEEc-----------c--------cC
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYT--SINATVFPGSDSSHLFALPGAGDANLRVFEA-----------D--------VL   69 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~i~~-----------D--------~~   69 (307)
                      +|-|.| -|+-|..++..|.+++..  +.+++..+.   +.+.....    ..++..+           |        ..
T Consensus         3 ~IkViG-vGGaG~n~vn~~~~~~~~~v~~iainTD~---~~L~~~~~----~~ki~iG~~~t~G~Gagg~p~~g~~aa~e   74 (198)
T d1rq2a1           3 VIKVVG-IGGGGVNAVNRMIEQGLKGVEFIAINTDA---QALLMSDA----DVKLDVGRDSTRGLGAGADPEVGRKAAED   74 (198)
T ss_dssp             CEEEEE-EHHHHHHHHHHHHHTTCCSEEEEEEESCH---HHHHHCCC----SEEEECCTTTC-----CCCHHHHHHHHHH
T ss_pred             eEEEEE-eCchHHHHHHHHHHcCCCCceEEEEcchH---HHHhcCCc----chhhccccccccCCCcCcChhhhHhhHHH
Confidence            355667 477799999999998753  455544321   22221110    1122222           2        13


Q ss_pred             ChhHHHHHhcCccEEEEeccCCCCCCCCChhhhhhhhhHHHHHHHHHHHHhcCCc
Q 021819           70 DSGAVSRAVEGCKGVFHVASPCTLEDPVDPEKELILPAVQGTLNVLEAAKRFGVR  124 (307)
Q Consensus        70 d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  124 (307)
                      +.+++.+.++++|.||-+||....            +-..++--+++.|++.+.-
T Consensus        75 ~~~~I~~~l~~~d~vfi~AGlGGg------------TGtGaaPviA~iake~g~l  117 (198)
T d1rq2a1          75 AKDEIEELLRGADMVFVTAGEGGG------------TGTGGAPVVASIARKLGAL  117 (198)
T ss_dssp             THHHHHHHHTTCSEEEEEEETTSS------------HHHHHHHHHHHHHHHHTCE
T ss_pred             HHHHHHHHhcCCCEEEEEEecCCC------------CCcchHHHHHHHHHHcCCc
Confidence            557788889999999999998664            2245667788999998753

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=83.53  E-value=0.15  Score=36.16  Aligned_cols=77  Identities=12%  Similarity=0.019  Sum_probs=39.1

Q ss_pred             EEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCCcccccCCCC-------CCCceEEEEcccCChhHHHHHhcCc----
Q 021819           13 CVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDSSHLFALPGA-------GDANLRVFEADVLDSGAVSRAVEGC----   81 (307)
Q Consensus        13 lItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~i~~D~~d~~~~~~~~~~~----   81 (307)
                      -+.| +|.+|+++++.|.+.+. .+....|+.++.+.+.+....       ......++-.=+ .++++.+++.+.    
T Consensus         3 gfIG-~G~mg~~l~~~L~~~~~-~~~v~~R~~~~~~~l~~~~~~~~~~~~~~~~~~DiVil~v-~d~~i~~v~~~l~~~~   79 (153)
T d2i76a2           3 NFVG-TGTLTRFFLECLKDRYE-IGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIV-PDRYIKTVANHLNLGD   79 (153)
T ss_dssp             EEES-CCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEECS-CTTTHHHHHTTTCCSS
T ss_pred             EEEe-CcHHHHHHHHHHHhCCC-EEEEEeCChhhhcchhhcccccccchhhhhccCcEEEEec-cchhhhHHHhhhcccc
Confidence            3556 79999999998855444 445677876554444332110       000122222222 334566665532    


Q ss_pred             cEEEEeccCCC
Q 021819           82 KGVFHVASPCT   92 (307)
Q Consensus        82 d~vi~~a~~~~   92 (307)
                      .+|+|+++...
T Consensus        80 ~ivi~~s~~~~   90 (153)
T d2i76a2          80 AVLVHCSGFLS   90 (153)
T ss_dssp             CCEEECCSSSC
T ss_pred             eeeeecccchh
Confidence            57888877543

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=82.70  E-value=0.74  Score=36.50  Aligned_cols=34  Identities=29%  Similarity=0.406  Sum_probs=29.5

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCC
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGS   45 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~   45 (307)
                      -.|+|+|| |.-|-..+.+|.+.|. +|+++.+.+.
T Consensus         8 ~dV~IIGA-G~sGl~~a~~L~~~G~-~v~i~Ek~~~   41 (298)
T d1w4xa1           8 VDVLVVGA-GFSGLYALYRLRELGR-SVHVIETAGD   41 (298)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             CCEEEECc-cHHHHHHHHHHHhCCC-CEEEEEcCCC
Confidence            46999996 9999999999999999 8888887543

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.32  E-value=1  Score=33.43  Aligned_cols=32  Identities=13%  Similarity=0.150  Sum_probs=26.4

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCC
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP   43 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~   43 (307)
                      |||++.| ++..|..+.+.|+++|+ +|.++...
T Consensus         1 MkI~~~G-~~~~~~~~l~~L~~~~~-~i~~V~t~   32 (203)
T d2bw0a2           1 MKIAVIG-QSLFGQEVYCHLRKEGH-EVVGVFTV   32 (203)
T ss_dssp             CEEEEEC-CHHHHHHHHHHHHHTTC-EEEEEEEC
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHCCC-cEEEEEcC
Confidence            4788887 67889999999999999 88876643

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=81.98  E-value=0.33  Score=35.30  Aligned_cols=24  Identities=29%  Similarity=0.450  Sum_probs=21.5

Q ss_pred             cEEEEeCCchhhHHHHHHHHHHCCC
Q 021819           10 ETVCVTGANGFIGTWLVKTLLDNNY   34 (307)
Q Consensus        10 ~~ilItGatG~iG~~l~~~L~~~g~   34 (307)
                      .+|+|.| +|++|-.++..|.+.|.
T Consensus         4 a~VvIIG-gG~~G~e~A~~l~~~g~   27 (183)
T d1d7ya1           4 APVVVLG-AGLASVSFVAELRQAGY   27 (183)
T ss_dssp             SSEEEEC-CSHHHHHHHHHHHHHTC
T ss_pred             CCEEEEC-ccHHHHHHHHHHHhcCC
Confidence            3699999 59999999999999887

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=81.84  E-value=0.77  Score=32.65  Aligned_cols=65  Identities=14%  Similarity=0.177  Sum_probs=37.7

Q ss_pred             cEEEEeCCchhhHHH-HHHHHHHC-CCCeEEEEe-CCCCCCcccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819           10 ETVCVTGANGFIGTW-LVKTLLDN-NYTSINATV-FPGSDSSHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus        10 ~~ilItGatG~iG~~-l~~~L~~~-g~~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      ++|.|.| +|.+|+. ....|... +. +++++. +++..........     ++     +..  +.++++++++|+|+-
T Consensus         2 iri~iIG-~G~~g~~~~~~~l~~~~~~-~i~~v~d~~~~~~~~~~~~~-----~~-----~~~--~~~~~l~~~~D~V~I   67 (164)
T d1tlta1           2 LRIGVVG-LGGIAQKAWLPVLAAASDW-TLQGAWSPTRAKALPICESW-----RI-----PYA--DSLSSLAASCDAVFV   67 (164)
T ss_dssp             EEEEEEC-CSTHHHHTHHHHHHSCSSE-EEEEEECSSCTTHHHHHHHH-----TC-----CBC--SSHHHHHTTCSEEEE
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHhCCCc-EEEEEEechhHhhhhhhhcc-----cc-----ccc--ccchhhhhhcccccc
Confidence            4899999 5999975 46666554 55 666554 4544433332210     11     122  234455678999987


Q ss_pred             ec
Q 021819           87 VA   88 (307)
Q Consensus        87 ~a   88 (307)
                      +.
T Consensus        68 ~t   69 (164)
T d1tlta1          68 HS   69 (164)
T ss_dssp             CS
T ss_pred             cc
Confidence            64

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=81.33  E-value=0.36  Score=34.24  Aligned_cols=34  Identities=15%  Similarity=0.041  Sum_probs=26.5

Q ss_pred             EEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC
Q 021819           11 TVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS   47 (307)
Q Consensus        11 ~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~   47 (307)
                      ||-+.| .|.+|+.+++.|++.|+ .+ ...|+.++.
T Consensus         2 kIg~IG-lG~MG~~ma~~L~~~g~-~~-~~~~~~~~~   35 (156)
T d2cvza2           2 KVAFIG-LGAMGYPMAGHLARRFP-TL-VWNRTFEKA   35 (156)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHTTSC-EE-EECSSTHHH
T ss_pred             eEEEEe-HHHHHHHHHHHHHhCCC-EE-EEeCCHHHH
Confidence            588888 59999999999998888 55 456655444

>d1p3y1_ c.34.1.1 (1:) MrsD {Bacillus sp. hil-y85/54728 [TaxId: 69002]}

class: Alpha and beta proteins (a/b)
fold: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
superfamily: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
family: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
domain: MrsD
species: Bacillus sp. hil-y85/54728 [TaxId: 69002]

Probab=80.94  E-value=0.48  Score=34.71  Aligned_cols=36  Identities=11%  Similarity=0.053  Sum_probs=23.2

Q ss_pred             cccCCcEEEEeCCchhhH----HHHHHHHHHCCCCeEEEEeC
Q 021819            5 AEKEEETVCVTGANGFIG----TWLVKTLLDNNYTSINATVF   42 (307)
Q Consensus         5 ~~~~~~~ilItGatG~iG----~~l~~~L~~~g~~~V~~~~r   42 (307)
                      ..+++|+|+ .|.||.|+    -.+++.|.+.|+ +|.++..
T Consensus         2 s~l~~KkIl-lgvTGsiaa~k~~~l~~~L~~~g~-eV~vv~T   41 (183)
T d1p3y1_           2 SILKDKKLL-IGICGSISSVGISSYLLYFKSFFK-EIRVVMT   41 (183)
T ss_dssp             TTGGGCEEE-EEECSCGGGGGTHHHHHHHTTTSS-EEEEEEC
T ss_pred             CCcCCCEEE-EEEeCHHHHHHHHHHHHHHHHCCC-eEEEEEE
Confidence            344566755 55666554    367777878888 7777654

>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class I ketol-acid reductoisomerase (KARI)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=80.47  E-value=1.1  Score=32.27  Aligned_cols=65  Identities=23%  Similarity=0.276  Sum_probs=46.5

Q ss_pred             CCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCCCCCC-cccccCCCCCCCceEEEEcccCChhHHHHHhcCccEEEE
Q 021819            8 EEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFPGSDS-SHLFALPGAGDANLRVFEADVLDSGAVSRAVEGCKGVFH   86 (307)
Q Consensus         8 ~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~i~~D~~d~~~~~~~~~~~d~vi~   86 (307)
                      +.|+|.|.| -|--|++=+.-|.++|. +|+.--|..+.. +.....      +++.        .++.++++..|+|..
T Consensus        15 k~k~IaViG-YGsQG~AhAlNLrDSG~-~V~VGLr~gs~s~~~A~~~------Gf~v--------~~~~eA~~~aDiim~   78 (182)
T d1np3a2          15 QGKKVAIIG-YGSQGHAHACNLKDSGV-DVTVGLRSGSATVAKAEAH------GLKV--------ADVKTAVAAADVVMI   78 (182)
T ss_dssp             HTSCEEEEC-CSHHHHHHHHHHHHTTC-CEEEECCTTCHHHHHHHHT------TCEE--------ECHHHHHHTCSEEEE
T ss_pred             CCCEEEEEe-eCcHhHHHHhhhhhcCC-CEEEEcCCCCccHHHHhhh------cccc--------ccHHHHhhhcCeeee
Confidence            478999999 69999999999999999 666655644332 222111      4443        346778899999998


Q ss_pred             ec
Q 021819           87 VA   88 (307)
Q Consensus        87 ~a   88 (307)
                      +.
T Consensus        79 L~   80 (182)
T d1np3a2          79 LT   80 (182)
T ss_dssp             CS
T ss_pred             ec
Confidence            84

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=80.21  E-value=0.85  Score=29.88  Aligned_cols=36  Identities=19%  Similarity=-0.011  Sum_probs=27.9

Q ss_pred             ccCCcEEEEeCCchhhHHHHHHHHHHCCCCeEEEEeCC
Q 021819            6 EKEEETVCVTGANGFIGTWLVKTLLDNNYTSINATVFP   43 (307)
Q Consensus         6 ~~~~~~ilItGatG~iG~~l~~~L~~~g~~~V~~~~r~   43 (307)
                      ..++|+|+|.|+ |.=|..++..|..... +++...|+
T Consensus        29 ~f~gK~VlVVG~-g~Sa~dia~~l~~~ak-~v~~~~~r   64 (107)
T d2gv8a2          29 LFVGESVLVVGG-ASSANDLVRHLTPVAK-HPIYQSLL   64 (107)
T ss_dssp             GGTTCCEEEECS-SHHHHHHHHHHTTTSC-SSEEEECT
T ss_pred             hcCCCeEEEECC-CCCHHHHHHHHHHhcC-EEEEEEec
Confidence            357899999995 8999999999987766 55545453