Citrus Sinensis ID: 021840

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------
MLDFKGNVADIVLGFDSIESYMKDNSPYFGCIVGRVANRIRDGKFALNGVHYTLPVNNGPNSLHGGNKGFDKVLWEVVEHKDGDHPSITFKYQSRDGEEGYPGDVTATATYALTSSKTMRLDMEAVPKNKATPINLAQHTYWNLAGHNSGDVLDHSLQIWGSQITPVDQNSIPTGEFLPVKGTAFDFTSEKKIGNSITDVPGLGYDHNYVLDCGEEKIGLKHAAKVKDPSGSRVLDLWTDAPGMQFYTANYVNGVAGKEGAVYEKHSGLCLETQGFPNAINQSNFPSIVVQPGEKYKQTMLFEFSAE
ccccccccccEEEccccHHHHHcccccEEccccccccccccccEEEEccEEEEccccccccccccccccccEEcEEEEEEccccccEEEEEEEccccccccccEEEEEEEEEEccccEEEEEEEEEEccccccccccccccccccccccccccccEEEEEccEEEEccccccccccccccccccccccccccccHHHccccccccEEEEEEcccccccccEEEEEEEccccccEEEEEEcccEEEEEccccccccccccccEEcccEEEEEcccccccccccccccccEEccccEEEEEEEEEEEEc
ccccccccccEEEccccHHHHHcHcccccccEEccEccEEHHHEEEEccEEEEccccEccEEEccccccHHHcEcEEEEEEcccEEEEEEEEEEcccHHHccccEEEEEEEEEEcccEEEEEEEEEccccccEEEccccEEEEcccccccccccEEEEEEccccccccccccccccEcccccccccccccccccHHHHccccccccccEEEccccccccccEEEEEEccccccEEEEEEccccEEEEEccccccccccccEEEccccEEEEccccccccccccccccEEEccccEEEEEEEEEEEcc
MLDFKGNVADIVLGFDSIesymkdnspyfgcIVGRVANRIRDGKFALNgvhytlpvnngpnslhggnkgFDKVLWEVVehkdgdhpsitfkyqsrdgeegypgdvTATATYALTSsktmrldmeavpknkatpinlAQHTywnlaghnsgdvldhslqiwgsqitpvdqnsiptgeflpvkgtafdftsekkignsitdvpglgydhnyvldcgeekiglkhaakvkdpsgsrvldlwtdapgmqfytanyvngvagkegavyekhsglcletqgfpnainqsnfpsivvqpgekykQTMLFEFSAE
mldfkgnvADIVLGFDSIESYMKDNSPYFGCIVGRVANRIRDGKFALNGVHYTLPVNNGPNSLHGGNKGFDKVLWEVVEHKDGDHPSITFkyqsrdgeegypGDVTATATYALTSSKTMRLDMEAVPKNKATPINLAQHTYWNLAGHNSGDVLDHSLQIWGSQITPVDQNSIPTGEFLPVKGTAFdftsekkignsitdvpglgYDHNYVLDCGEEKIGLKHaakvkdpsgsRVLDLWTDAPGMQFYTANYVNGVAGKEGAVYEKHSGLCLETQGFPNAINQSNFPSIVVQPGEKYKQTMLFEFSAE
MLDFKGNVADIVLGFDSIESYMKDNSPYFGCIVGRVANRIRDGKFALNGVHYTLPVNNGPNSLHGGNKGFDKVLWEVVEHKDGDHPSITFKYQSRDGEEGYPGDVTATATYALTSSKTMRLDMEAVPKNKATPINLAQHTYWNLAGHNSGDVLDHSLQIWGSQITPVDQNSIPTGEFLPVKGTAFDFTSEKKIGNSITDVPGLGYDHNYVLDCGEEKIGLKHAAKVKDPSGSRVLDLWTDAPGMQFYTANYVNGVAGKEGAVYEKHSGLCLETQGFPNAINQSNFPSIVVQPGEKYKQTMLFEFSAE
****KGNVADIVLGFDSIESYMKDNSPYFGCIVGRVANRIRDGKFALNGVHYTLPVNNGPNSLHGGNKGFDKVLWEVVEHKDGDH*SITFKY************VTATATYAL*****************ATPINLAQHTYWNLAGHNSGDVLDHSLQIWGSQITPVDQNSIPTGEFLPVKGTAFDFTSEKKIGNSITDVPGLGYDHNYVLDCGEEKIGLKHAAKVKDPSGSRVLDLWTDAPGMQFYTANYVNGVAGKEGAVYEKHSGLCLETQGFPNAINQSNFPSIVVQPG**Y***********
MLDFKGNVADIVLGFDSIESYMKDNSPYFGCIVGRVANRIRDGKFALNGVHYTLPVNNGPNSLHGGNKGFDKVLWEVVEHKDGDHPSITFKYQSRDGEEGYPGDVTATATYALTSSKTMRLDMEAVPKNKATPINLAQHTYWNLAGHNSGDVLDHSLQIWGSQITPVDQNSIPTGEFLPVKGTAFDFTSEKKIGNSITDVPGLGYDHNYVLDCGEEKIGLKHAAKVKDPSGSRVLDLWTDAPGMQFYTANYVNGVAGKEGAVYEKHSGLCLETQGFPNAINQSNFPSIVVQPGEKYKQTMLFEFSAE
MLDFKGNVADIVLGFDSIESYMKDNSPYFGCIVGRVANRIRDGKFALNGVHYTLPVNNGPNSLHGGNKGFDKVLWEVVEHKDGDHPSITFKYQSRDGEEGYPGDVTATATYALTSSKTMRLDMEAVPKNKATPINLAQHTYWNLAGHNSGDVLDHSLQIWGSQITPVDQNSIPTGEFLPVKGTAFDFTSEKKIGNSITDVPGLGYDHNYVLDCGEEKIGLKHAAKVKDPSGSRVLDLWTDAPGMQFYTANYVNGVAGKEGAVYEKHSGLCLETQGFPNAINQSNFPSIVVQPGEKYKQTMLFEFSAE
****KGNVADIVLGFDSIESYMKDNSPYFGCIVGRVANRIRDGKFALNGVHYTLPVNNGPNSLHGGNKGFDKVLWEVVEHKDGDHPSITFKYQSRDGEEGYPGDVTATATYALTSSKTMRLDMEAVPKNKATPINLAQHTYWNLAGHNSGDVLDHSLQIWGSQITPVDQNSIPTGEFLPVKGTAFDFTSEKKIGNSITDVPGLGYDHNYVLDCGEEKIGLKHAAKVKDPSGSRVLDLWTDAPGMQFYTANYVNGVAGKEGAVYEKHSGLCLETQGFPNAINQSNFPSIVVQPGEKYKQTMLFEFSAE
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MLDFKGNVADIVLGFDSIESYMKDNSPYFGCIVGRVANRIRDGKFALNGVHYTLPVNNGPNSLHGGNKGFDKVLWEVVEHKDGDHPSITFKYQSRDGEEGYPGDVTATATYALTSSKTMRLDMEAVPKNKATPINLAQHTYWNLAGHNSGDVLDHSLQIWGSQITPVDQNSIPTGEFLPVKGTAFDFTSEKKIGNSITDVPGLGYDHNYVLDCGEEKIGLKHAAKVKDPSGSRVLDLWTDAPGMQFYTANYVNGVAGKEGAVYEKHSGLCLETQGFPNAINQSNFPSIVVQPGEKYKQTMLFEFSAE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query307 2.2.26 [Sep-21-2011]
Q9GKX6342 Aldose 1-epimerase OS=Sus yes no 0.957 0.859 0.459 2e-72
Q66HG4342 Aldose 1-epimerase OS=Rat yes no 0.957 0.859 0.449 5e-71
Q8K157342 Aldose 1-epimerase OS=Mus yes no 0.957 0.859 0.452 6e-71
Q5EA79342 Aldose 1-epimerase OS=Bos yes no 0.957 0.859 0.452 6e-71
Q96C23342 Aldose 1-epimerase OS=Hom yes no 0.957 0.859 0.449 3e-70
Q5R8U1342 Aldose 1-epimerase OS=Pon yes no 0.957 0.859 0.449 4e-70
P05149381 Aldose 1-epimerase OS=Aci yes no 0.986 0.795 0.378 3e-53
P0A9C4346 Aldose 1-epimerase OS=Shi yes no 0.957 0.849 0.347 5e-44
P0A9C3346 Aldose 1-epimerase OS=Esc N/A no 0.957 0.849 0.347 5e-44
P31765340 Aldose 1-epimerase OS=Hae yes no 0.931 0.841 0.326 8e-36
>sp|Q9GKX6|GALM_PIG Aldose 1-epimerase OS=Sus scrofa GN=GALM PE=2 SV=1 Back     alignment and function desciption
 Score =  272 bits (696), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 140/305 (45%), Positives = 194/305 (63%), Gaps = 11/305 (3%)

Query: 3   DFKGNVADIVLGFDSIESYMKDNSPYFGCIVGRVANRIRDGKFALNGVHYTLPVNNGPNS 62
           D +G  +D+VLGF  ++ Y++ + PYFG +VGRVANRI  G F L+G  Y L +NNGPNS
Sbjct: 47  DRQGRASDVVLGFAELKEYLQKH-PYFGAVVGRVANRIAKGTFTLDGKEYKLAINNGPNS 105

Query: 63  LHGGNKGFDKVLWEVVEHKDGDHPSITFKYQSRDGEEGYPGDVTATATYALTSSKTMRLD 122
           LHGG +GFDKVLW      +G    I F   S DGEEGYPG++    TY L   + + ++
Sbjct: 106 LHGGVRGFDKVLWTPRVLSNG----IEFSRVSPDGEEGYPGELKVWVTYTLDGGE-LVVN 160

Query: 123 MEAVPKNKATPINLAQHTYWNLAGHNSGDVLDHSLQIWGSQITPVDQNSIPTGEFLPVKG 182
             A   ++ TP+NL  H+Y+NLAG  S ++ DH + I      PVD+  IPTGE  PV+G
Sbjct: 161 YRA-QASQTTPVNLTNHSYFNLAGQGSPNIYDHEVTIEADAFLPVDETLIPTGEIAPVQG 219

Query: 183 TAFDFTSEKKIGNSITDVPGLGYDHNYVLDCGEEKIGLKHAAKVKDPSGSRVLDLWTDAP 242
           TAFD     ++G  + +    G+DHN+ L   +EK   +  A+V      RVL+++T  P
Sbjct: 220 TAFDLRKPVELGKHLQEFHINGFDHNFCLKRSKEK---QFCARVHHAGSGRVLEVYTTQP 276

Query: 243 GMQFYTANYVNG-VAGKEGAVYEKHSGLCLETQGFPNAINQSNFPSIVVQPGEKYKQTML 301
           G+QFYT N+++G + GK GAVY KHSG CLETQ +PNA+NQ +FP ++++PGE+Y  T  
Sbjct: 277 GIQFYTGNFLDGTLKGKTGAVYPKHSGFCLETQNWPNAVNQPHFPPVLLKPGEEYNHTTW 336

Query: 302 FEFSA 306
           F FS 
Sbjct: 337 FVFSV 341
Mutarotase converts alpha-aldose to the beta-anomer. It is active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose.
Sus scrofa (taxid: 9823)
EC: 5EC: .EC: 1EC: .EC: 3EC: .EC: 3
>sp|Q66HG4|GALM_RAT Aldose 1-epimerase OS=Rattus norvegicus GN=Galm PE=1 SV=1 Back     alignment and function description
>sp|Q8K157|GALM_MOUSE Aldose 1-epimerase OS=Mus musculus GN=Galm PE=2 SV=1 Back     alignment and function description
>sp|Q5EA79|GALM_BOVIN Aldose 1-epimerase OS=Bos taurus GN=GALM PE=2 SV=1 Back     alignment and function description
>sp|Q96C23|GALM_HUMAN Aldose 1-epimerase OS=Homo sapiens GN=GALM PE=1 SV=1 Back     alignment and function description
>sp|Q5R8U1|GALM_PONAB Aldose 1-epimerase OS=Pongo abelii GN=GALM PE=2 SV=1 Back     alignment and function description
>sp|P05149|GALM_ACICA Aldose 1-epimerase OS=Acinetobacter calcoaceticus GN=mro PE=1 SV=1 Back     alignment and function description
>sp|P0A9C4|GALM_SHIFL Aldose 1-epimerase OS=Shigella flexneri GN=galM PE=3 SV=1 Back     alignment and function description
>sp|P0A9C3|GALM_ECOLI Aldose 1-epimerase OS=Escherichia coli (strain K12) GN=galM PE=1 SV=1 Back     alignment and function description
>sp|P31765|GALM_HAEIN Aldose 1-epimerase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=galM PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query307
255580711335 aldose-1-epimerase, putative [Ricinus co 0.993 0.910 0.806 1e-148
224065158342 predicted protein [Populus trichocarpa] 0.993 0.891 0.822 1e-147
225456177338 PREDICTED: aldose 1-epimerase [Vitis vin 0.990 0.899 0.790 1e-142
297734338322 unnamed protein product [Vitis vinifera] 0.990 0.944 0.790 1e-142
224118626337 predicted protein [Populus trichocarpa] 0.990 0.902 0.783 1e-141
255579259340 aldose-1-epimerase, putative [Ricinus co 0.990 0.894 0.773 1e-141
125531175334 hypothetical protein OsI_32784 [Oryza sa 0.986 0.907 0.786 1e-140
115481198362 Os10g0155500 [Oryza sativa Japonica Grou 0.983 0.834 0.786 1e-139
242039891337 hypothetical protein SORBIDRAFT_01g02592 0.983 0.896 0.752 1e-138
192910798338 aldose 1-epimerase-like protein [Elaeis 0.986 0.896 0.757 1e-137
>gi|255580711|ref|XP_002531177.1| aldose-1-epimerase, putative [Ricinus communis] gi|223529218|gb|EEF31192.1| aldose-1-epimerase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 246/305 (80%), Positives = 278/305 (91%)

Query: 3   DFKGNVADIVLGFDSIESYMKDNSPYFGCIVGRVANRIRDGKFALNGVHYTLPVNNGPNS 62
           D +G + DIVLGFDS+E+YMK N+PYFGCIVGRVANRI++GKF+LNGV Y+L +NNGPNS
Sbjct: 31  DKQGKLDDIVLGFDSVEAYMKGNAPYFGCIVGRVANRIKEGKFSLNGVEYSLAINNGPNS 90

Query: 63  LHGGNKGFDKVLWEVVEHKDGDHPSITFKYQSRDGEEGYPGDVTATATYALTSSKTMRLD 122
           LHGG KGFDKV+W+VVEHK G+ PSITFKY+S DGEEGYPGDVT TA Y LTSSK+MRLD
Sbjct: 91  LHGGIKGFDKVVWDVVEHKSGEQPSITFKYESHDGEEGYPGDVTVTAKYTLTSSKSMRLD 150

Query: 123 MEAVPKNKATPINLAQHTYWNLAGHNSGDVLDHSLQIWGSQITPVDQNSIPTGEFLPVKG 182
           +EAVPK+K+TP+NLAQHTYWNLAGHNSG+VL+H +QIWGSQITPVDQNSIPTGEFLPVKG
Sbjct: 151 LEAVPKSKSTPVNLAQHTYWNLAGHNSGNVLEHLVQIWGSQITPVDQNSIPTGEFLPVKG 210

Query: 183 TAFDFTSEKKIGNSITDVPGLGYDHNYVLDCGEEKIGLKHAAKVKDPSGSRVLDLWTDAP 242
           T FDFTSEKK+G+SI+ V GLGYDHNY+LD  EEK GLKHAAKVKDPS SRVL+LWT+AP
Sbjct: 211 TVFDFTSEKKVGSSISKVEGLGYDHNYILDSEEEKEGLKHAAKVKDPSSSRVLNLWTNAP 270

Query: 243 GMQFYTANYVNGVAGKEGAVYEKHSGLCLETQGFPNAINQSNFPSIVVQPGEKYKQTMLF 302
           GMQFYTANYVNGV+GK GAVY+KHSGLC ETQGFPN+INQ NFPSIVV PGEKYK +MLF
Sbjct: 271 GMQFYTANYVNGVSGKGGAVYDKHSGLCFETQGFPNSINQQNFPSIVVHPGEKYKHSMLF 330

Query: 303 EFSAE 307
           EFS E
Sbjct: 331 EFSVE 335

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224065158|ref|XP_002301693.1| predicted protein [Populus trichocarpa] gi|222843419|gb|EEE80966.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225456177|ref|XP_002282634.1| PREDICTED: aldose 1-epimerase [Vitis vinifera] Back     alignment and taxonomy information
>gi|297734338|emb|CBI15585.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224118626|ref|XP_002317867.1| predicted protein [Populus trichocarpa] gi|222858540|gb|EEE96087.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255579259|ref|XP_002530475.1| aldose-1-epimerase, putative [Ricinus communis] gi|223529972|gb|EEF31898.1| aldose-1-epimerase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|125531175|gb|EAY77740.1| hypothetical protein OsI_32784 [Oryza sativa Indica Group] Back     alignment and taxonomy information
>gi|115481198|ref|NP_001064192.1| Os10g0155500 [Oryza sativa Japonica Group] gi|78707805|gb|ABB46780.1| Aldose 1-epimerase family protein, expressed [Oryza sativa Japonica Group] gi|113638801|dbj|BAF26106.1| Os10g0155500 [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|242039891|ref|XP_002467340.1| hypothetical protein SORBIDRAFT_01g025920 [Sorghum bicolor] gi|241921194|gb|EER94338.1| hypothetical protein SORBIDRAFT_01g025920 [Sorghum bicolor] Back     alignment and taxonomy information
>gi|192910798|gb|ACF06507.1| aldose 1-epimerase-like protein [Elaeis guineensis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query307
TAIR|locus:2088555341 AT3G17940 [Arabidopsis thalian 0.986 0.888 0.735 1.3e-125
TAIR|locus:2100352358 AT3G47800 [Arabidopsis thalian 0.973 0.835 0.519 5.2e-81
TAIR|locus:2150886490 AT5G15140 [Arabidopsis thalian 0.973 0.610 0.506 1.6e-79
UNIPROTKB|Q9GKX6342 GALM "Aldose 1-epimerase" [Sus 0.954 0.856 0.460 2.6e-70
UNIPROTKB|E2QWA2342 GALM "Uncharacterized protein" 0.954 0.856 0.453 5.5e-70
UNIPROTKB|Q5EA79342 GALM "Aldose 1-epimerase" [Bos 0.954 0.856 0.453 3e-69
MGI|MGI:2442420342 Galm "galactose mutarotase" [M 0.954 0.856 0.453 3.8e-69
RGD|1359459342 Galm "galactose mutarotase (al 0.954 0.856 0.450 3.8e-69
UNIPROTKB|Q96C23342 GALM "Aldose 1-epimerase" [Hom 0.954 0.856 0.450 3.5e-68
ZFIN|ZDB-GENE-040718-66342 galm "galactose mutarotase" [D 0.960 0.862 0.459 3.1e-67
TAIR|locus:2088555 AT3G17940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1234 (439.4 bits), Expect = 1.3e-125, P = 1.3e-125
 Identities = 225/306 (73%), Positives = 260/306 (84%)

Query:     3 DFKGNVADIVLGFDSIESYMKDNSPYFGCIVGRVANRIRDGKFALNGVHYTLPVNNGPNS 62
             D  G + D+VLGFDS++ Y+K  +PYFGCIVGRVANRI++GKF+LNGV+YTLP+N  PNS
Sbjct:    37 DKNGKLGDVVLGFDSVDPYVKGLAPYFGCIVGRVANRIKEGKFSLNGVNYTLPINKPPNS 96

Query:    63 LHGGNKGFDKVLWEVVEHK-DGDHPSITFKYQSRDGEEGYPGDVTATATYALTSSKTMRL 121
             LHGGNKGFDK +WEV  HK DG+ P ITFKY S DGEEGYPG V+ TATY LTS+ TMRL
Sbjct:    97 LHGGNKGFDKKIWEVAGHKRDGEKPFITFKYHSADGEEGYPGAVSVTATYTLTSATTMRL 156

Query:   122 DMEAVPKNKATPINLAQHTYWNLAGHNSGDVLDHSLQIWGSQITPVDQNSIPTGEFLPVK 181
             DMEAVP+NK TPINLAQHTYWNLAGH+SG++LDH +QIWGS ITPVD+ ++PTGE LPVK
Sbjct:   157 DMEAVPENKDTPINLAQHTYWNLAGHDSGNILDHKIQIWGSHITPVDEYTVPTGEILPVK 216

Query:   182 GTAFDFTSEKKIGNSITDVPGLGYDHNYVLDC-GEEKIGLKHAAKVKDPSGSRVLDLWTD 240
             GT FDFT EK+IG SI +V G+GYDHNYVLDC  +EK GLKHAAK+ D + SRVL+LWT+
Sbjct:   217 GTPFDFTEEKRIGESIGEV-GIGYDHNYVLDCPDQEKEGLKHAAKLSDAASSRVLNLWTN 275

Query:   241 APGMQFYTANYVNGVAGKEGAVYEKHSGLCLETQGFPNAINQSNFPSIVVQPGEKYKQTM 300
              PGMQFYT NYVNGV GK  AVY KH+G+CLETQGFPNAINQSNFPS+VV+ GEKY  TM
Sbjct:   276 VPGMQFYTGNYVNGVVGKGNAVYGKHAGVCLETQGFPNAINQSNFPSVVVKAGEKYNHTM 335

Query:   301 LFEFSA 306
             LFEFSA
Sbjct:   336 LFEFSA 341
GO:0003824 "catalytic activity" evidence=IEA
GO:0004034 "aldose 1-epimerase activity" evidence=ISS
GO:0005737 "cytoplasm" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0006012 "galactose metabolic process" evidence=ISS
GO:0016853 "isomerase activity" evidence=IEA
GO:0019318 "hexose metabolic process" evidence=IEA
GO:0030246 "carbohydrate binding" evidence=IEA
GO:0005829 "cytosol" evidence=IDA
GO:0048046 "apoplast" evidence=IDA
GO:0042732 "D-xylose metabolic process" evidence=RCA
TAIR|locus:2100352 AT3G47800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2150886 AT5G15140 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q9GKX6 GALM "Aldose 1-epimerase" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E2QWA2 GALM "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q5EA79 GALM "Aldose 1-epimerase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:2442420 Galm "galactose mutarotase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1359459 Galm "galactose mutarotase (aldose 1-epimerase)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q96C23 GALM "Aldose 1-epimerase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040718-66 galm "galactose mutarotase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5R8U1GALM_PONAB5, ., 1, ., 3, ., 30.44910.95760.8596yesno
P31765GALM_HAEIN5, ., 1, ., 3, ., 30.32670.93150.8411yesno
Q5EA79GALM_BOVIN5, ., 1, ., 3, ., 30.45240.95760.8596yesno
Q66HG4GALM_RAT5, ., 1, ., 3, ., 30.44910.95760.8596yesno
P0A9C4GALM_SHIFL5, ., 1, ., 3, ., 30.34740.95760.8497yesno
Q9GKX6GALM_PIG5, ., 1, ., 3, ., 30.45900.95760.8596yesno
Q8K157GALM_MOUSE5, ., 1, ., 3, ., 30.45240.95760.8596yesno
Q96C23GALM_HUMAN5, ., 1, ., 3, ., 30.44910.95760.8596yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer5.1.3.30.824
3rd Layer5.1.30.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_LG_II002249
aldose 1-epimerase (EC-5.1.3.3) (342 aa)
(Populus trichocarpa)
Predicted Functional Partners:
fgenesh4_pm.C_LG_I000617
hexokinase (508 aa)
     •  0.899
fgenesh4_pg.C_LG_VII001238
hexokinase (EC-2.7.1.2) (502 aa)
     •  0.899
fgenesh4_pg.C_LG_IX001086
hexokinase (508 aa)
     •  0.899
estExt_fgenesh4_pg.C_LG_XVIII0751
hexokinase (EC-2.7.1.1) (498 aa)
     •  0.899
estExt_fgenesh4_pg.C_LG_V1520
hexokinase/glucokinase (EC-2.7.1.4) (467 aa)
     •  0.899
estExt_fgenesh4_pg.C_LG_I1452
hexokinase (EC-2.7.1.1) (495 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query307
PLN00194337 PLN00194, PLN00194, aldose 1-epimerase; Provisiona 0.0
cd09019326 cd09019, galactose_mutarotase_like, galactose muta 1e-155
pfam01263301 pfam01263, Aldose_epim, Aldose 1-epimerase 1e-95
TIGR02636336 TIGR02636, galM_Leloir, galactose mutarotase 1e-90
PRK11055342 PRK11055, galM, galactose-1-epimerase; Provisional 4e-87
COG2017308 COG2017, GalM, Galactose mutarotase and related en 5e-69
PTZ00485376 PTZ00485, PTZ00485, aldolase 1-epimerase; Provisio 1e-44
cd01081284 cd01081, Aldose_epim, aldose 1-epimerase superfami 8e-36
cd09022284 cd09022, Aldose_epim_Ec_YihR, Aldose 1-epimerase, 5e-20
PRK15172300 PRK15172, PRK15172, putative aldose-1-epimerase; P 2e-08
cd09021273 cd09021, Aldose_epim_Ec_YphB, aldose 1-epimerase, 5e-07
>gnl|CDD|215098 PLN00194, PLN00194, aldose 1-epimerase; Provisional Back     alignment and domain information 
 Score =  570 bits (1472), Expect = 0.0
 Identities = 225/304 (74%), Positives = 253/304 (83%), Gaps = 3/304 (0%)

Query: 3   DFKGNVADIVLGFDSIESYMKDNSPYFGCIVGRVANRIRDGKFALNGVHYTLPVNNGPNS 62
           D  G +AD+VLGFDS+E Y  D SPYFG IVGRVANRI+  KF LNGV Y LP NNGPNS
Sbjct: 37  DKNGKLADVVLGFDSVEPYKND-SPYFGAIVGRVANRIKGAKFTLNGVTYKLPPNNGPNS 95

Query: 63  LHGGNKGFDKVLWEVVEHKDGDHPSITFKYQSRDGEEGYPGDVTATATYALTSSKTMRLD 122
           LHGG KGF KV+WEV ++K G+ PSITFKY S DGEEG+PGD++ T TY L SS T+RLD
Sbjct: 96  LHGGPKGFSKVVWEVAKYKKGEKPSITFKYHSFDGEEGFPGDLSVTVTYTLLSSNTLRLD 155

Query: 123 MEAVPKNKATPINLAQHTYWNLAGHNSGDVLDHSLQIWGSQITPVDQNSIPTGEFLPVKG 182
           MEA P NKATP+NLAQHTYWNLAGHNSGD+L H +QI+GS ITPVD+N IPTGE LPVKG
Sbjct: 156 MEAKPLNKATPVNLAQHTYWNLAGHNSGDILSHKIQIFGSHITPVDENLIPTGEILPVKG 215

Query: 183 TAFDFTSEKKIGNSITDVPGLGYDHNYVLDCGEEKIGLKHAAKVKDPSGSRVLDLWTDAP 242
           T FDFT+ KKIG+ I ++P  GYDHNYVLD GEEK GLK AAKVKDP   RVL+LWT+AP
Sbjct: 216 TPFDFTTPKKIGSRINELPK-GYDHNYVLD-GEEKEGLKKAAKVKDPKSGRVLELWTNAP 273

Query: 243 GMQFYTANYVNGVAGKEGAVYEKHSGLCLETQGFPNAINQSNFPSIVVQPGEKYKQTMLF 302
           GMQFYT+NYVNGV GK GAVY KH+GLCLETQGFP+A+NQ NFPS+VV PGEKYK TMLF
Sbjct: 274 GMQFYTSNYVNGVKGKGGAVYGKHAGLCLETQGFPDAVNQPNFPSVVVNPGEKYKHTMLF 333

Query: 303 EFSA 306
           EFSA
Sbjct: 334 EFSA 337

Length = 337
>gnl|CDD|185696 cd09019, galactose_mutarotase_like, galactose mutarotase_like Back     alignment and domain information
>gnl|CDD|216397 pfam01263, Aldose_epim, Aldose 1-epimerase Back     alignment and domain information
>gnl|CDD|233958 TIGR02636, galM_Leloir, galactose mutarotase Back     alignment and domain information
>gnl|CDD|182931 PRK11055, galM, galactose-1-epimerase; Provisional Back     alignment and domain information
>gnl|CDD|224928 COG2017, GalM, Galactose mutarotase and related enzymes [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|240435 PTZ00485, PTZ00485, aldolase 1-epimerase; Provisional Back     alignment and domain information
>gnl|CDD|185695 cd01081, Aldose_epim, aldose 1-epimerase superfamily Back     alignment and domain information
>gnl|CDD|185699 cd09022, Aldose_epim_Ec_YihR, Aldose 1-epimerase, similar to Escherichia coli YihR Back     alignment and domain information
>gnl|CDD|237918 PRK15172, PRK15172, putative aldose-1-epimerase; Provisional Back     alignment and domain information
>gnl|CDD|185698 cd09021, Aldose_epim_Ec_YphB, aldose 1-epimerase, similar to Escherichia coli YphB Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 307
PRK11055342 galM galactose-1-epimerase; Provisional 100.0
KOG1604353 consensus Predicted mutarotase [Carbohydrate trans 100.0
PTZ00485376 aldolase 1-epimerase; Provisional 100.0
TIGR02636335 galM_Leloir galactose mutarotase. Members of this 100.0
PLN00194337 aldose 1-epimerase; Provisional 100.0
cd09019326 galactose_mutarotase_like galactose mutarotase_lik 100.0
PRK15172300 putative aldose-1-epimerase; Provisional 100.0
COG2017308 GalM Galactose mutarotase and related enzymes [Car 100.0
cd09022284 Aldose_epim_Ec_YihR Aldose 1-epimerase, similar to 100.0
PF01263300 Aldose_epim: Aldose 1-epimerase; InterPro: IPR0081 100.0
cd09021273 Aldose_epim_Ec_YphB aldose 1-epimerase, similar to 100.0
cd01081284 Aldose_epim aldose 1-epimerase superfamily. Aldose 100.0
cd09024288 Aldose_epim_lacX Aldose 1-epimerase, similar to La 100.0
cd09025271 Aldose_epim_Slr1438 Aldose 1-epimerase, similar to 100.0
cd09020269 D-hex-6-P-epi_like D-hexose-6-phosphate epimerase- 99.97
cd09023284 Aldose_epim_Ec_c4013 Aldose 1-epimerase, similar t 99.83
KOG1594305 consensus Uncharacterized enzymes related to aldos 99.79
COG0676287 Uncharacterized enzymes related to aldose 1-epimer 99.65
cd09269293 deoxyribose_mutarotase deoxyribose mutarotase_like 99.26
PF14486302 DUF4432: Domain of unknown function (DUF4432); PDB 98.73
PF14315274 DUF4380: Domain of unknown function (DUF4380) 92.82
>PRK11055 galM galactose-1-epimerase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.6e-73  Score=521.37  Aligned_cols=299  Identities=38%  Similarity=0.716  Sum_probs=269.4

Q ss_pred             CCCCCCceeeeEecCCChHHhhhCCCCcccceeecCCCccCCCeEEECCEEEEccCCCCCCccCCCcCCCCeeeEEEEEe
Q 021840            1 MLDFKGNVADIVLGFDSIESYMKDNSPYFGCIVGRVANRIRDGKFALNGVHYTLPVNNGPNSLHGGNKGFDKVLWEVVEH   80 (307)
Q Consensus         1 ~~d~~g~~~~vvlg~~~~~~y~~~~~~~~g~~l~p~~nRi~~g~~~~~G~~y~l~~n~~~~~lHG~~~g~~~~~w~v~~~   80 (307)
                      +||++|+++||||||++.++|..+ +.|+|++||||||||++|+|+++|++|+|++|+++|+||||..||+++.|+++..
T Consensus        36 vpd~~g~~~dvvlg~~~~~~y~~~-~~~~Ga~iGr~anRI~~g~f~~~G~~y~L~~N~~~n~lHGg~~G~~~~~W~v~~~  114 (342)
T PRK11055         36 VPLSDGSVREVLLGCASPEDYPDQ-AAYLGASVGRYANRIANSRFTLDGETYQLSPNQGGNQLHGGPEGFDKRRWQIVNQ  114 (342)
T ss_pred             eECCCCCEeeeEECCCCHHHHhhC-CCccCceeCCcCCcccCCEEEECCEEEEcccCCCCcccCCCCcccCCcEEEEEEc
Confidence            589999999999999999999987 7899999999999999999999999999999999999999999999999999877


Q ss_pred             eCCCCCEEEEEEEeCCCCCCCCeeEEEEEEEEEcCCCcEEEEEEEeeCCcceeeeecCcceeecCCC-CCCCccccEEEE
Q 021840           81 KDGDHPSITFKYQSRDGEEGYPGDVTATATYALTSSKTMRLDMEAVPKNKATPINLAQHTYWNLAGH-NSGDVLDHSLQI  159 (307)
Q Consensus        81 ~~~~~~~v~l~~~~~~~~~gyP~~~~~~v~y~L~~~~~L~i~~~~~n~~~~~p~~lg~HpyFnl~~~-~~~~~~~~~l~~  159 (307)
                      .   .++|+|++.++++++||||+++++|+|+|+++++|+|+|+++ ++++||||+|+||||||++. ...++.+|.|+|
T Consensus       115 ~---~~~v~l~~~~~~g~~GyPg~l~~~vtY~L~~~~~l~i~~~a~-~d~~tp~nlt~H~YFnL~g~~~~~~i~~h~L~i  190 (342)
T PRK11055        115 N---DRQVTFSLSSPDGDQGFPGNLGATVTYRLTDDNRVSITYRAT-VDKPCPVNLTNHAYFNLDGAEEGSDVRNHKLQI  190 (342)
T ss_pred             c---CCEEEEEEECCCcCCCCCeEEEEEEEEEEcCCCeEEEEEEEE-cCCCeEEeccccceEECCCCCCCCCccceEEEE
Confidence            6   578999999988889999999999999998667999999997 49999999999999999874 235789999999


Q ss_pred             ecCeEEeeCCCCCCCccccccCCCCccccccccccccccCC-----CCCCceeeEEeCCCccccCceeEEEEEcCCCCcE
Q 021840          160 WGSQITPVDQNSIPTGEFLPVKGTAFDFTSEKKIGNSITDV-----PGLGYDHNYVLDCGEEKIGLKHAAKVKDPSGSRV  234 (307)
Q Consensus       160 ~a~~~~~~d~~~lptg~~~~~~~t~~df~~~~~l~~~~~~~-----~~~~~D~~f~l~~~~~~~~~~~~~~l~~~~~g~~  234 (307)
                      +|++++++|+++||||++++++++++||+.++.|++.+...     .. ++||||+|+..  ....+.+|+|.++.++++
T Consensus       191 ~a~~~~~~d~~~iPTG~~~~v~~t~~DFr~~~~l~~~~~~~~~~~~~~-g~D~~fvl~~~--~~~~~~~a~l~~~~sg~~  267 (342)
T PRK11055        191 NADEYLPVDEGGIPNGGLKSVAGTSFDFRQPKTIAQDFLADDDQQKVK-GYDHAFLLQAK--GDGKKPAAHLWSPDEKLQ  267 (342)
T ss_pred             ecCCEEEECcccCccCcEeccCCCcccccCCcCcCcccccchhcccCC-CcceEEEECCC--CcccceeEEEEcCCCCeE
Confidence            99999999999999999999999999999999998865211     12 79999998631  111246789999999999


Q ss_pred             EEEEeCCCeEEEEcCCCCCCcCCCCCcccCCceEEEEcCCCCCCCCCCCCCC--CceECCCCEEEEEEEEEEEeC
Q 021840          235 LDLWTDAPGMQFYTANYVNGVAGKEGAVYEKHSGLCLETQGFPNAINQSNFP--SIVVQPGEKYKQTMLFEFSAE  307 (307)
Q Consensus       235 l~v~~~~p~~~v~t~~~~~~~~~~~~~~~~~~~~iciEp~~~pda~n~~~~~--~~~L~pG~~~~~~~~y~f~~~  307 (307)
                      |+|++++|+|||||+++++...++.|+.|.++.+||||||++|||+|+++|+  .++|+|||+|+++|+|+|++|
T Consensus       268 l~v~t~~p~lqvYT~n~~~~~~~~~g~~~~~~~gialE~q~~Pda~n~~~f~~~~~~L~pg~~y~~~t~y~f~~~  342 (342)
T PRK11055        268 MKVYTTAPALQFYSGNFLAGTPSRGGGPYADYAGLALESQFLPDSPNHPEWPQPDCILKPGEEYRSLTEYQFIAE  342 (342)
T ss_pred             EEEEcCCCEEEEecCCccCCccCCCCcEeCCCceEEEEcccCCCcccccCCCCCCeEECCCCEEEEEEEEEEEeC
Confidence            9999999999999999886544667888889999999999999999999996  899999999999999999975

>KOG1604 consensus Predicted mutarotase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PTZ00485 aldolase 1-epimerase; Provisional Back     alignment and domain information
>TIGR02636 galM_Leloir galactose mutarotase Back     alignment and domain information
>PLN00194 aldose 1-epimerase; Provisional Back     alignment and domain information
>cd09019 galactose_mutarotase_like galactose mutarotase_like Back     alignment and domain information
>PRK15172 putative aldose-1-epimerase; Provisional Back     alignment and domain information
>COG2017 GalM Galactose mutarotase and related enzymes [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd09022 Aldose_epim_Ec_YihR Aldose 1-epimerase, similar to Escherichia coli YihR Back     alignment and domain information
>PF01263 Aldose_epim: Aldose 1-epimerase; InterPro: IPR008183 Aldose 1-epimerase (5 Back     alignment and domain information
>cd09021 Aldose_epim_Ec_YphB aldose 1-epimerase, similar to Escherichia coli YphB Back     alignment and domain information
>cd01081 Aldose_epim aldose 1-epimerase superfamily Back     alignment and domain information
>cd09024 Aldose_epim_lacX Aldose 1-epimerase, similar to Lactococcus lactis lacX Back     alignment and domain information
>cd09025 Aldose_epim_Slr1438 Aldose 1-epimerase, similar to Synechocystis Slr1438 Back     alignment and domain information
>cd09020 D-hex-6-P-epi_like D-hexose-6-phosphate epimerase-like Back     alignment and domain information
>cd09023 Aldose_epim_Ec_c4013 Aldose 1-epimerase, similar to Escherichia coli c4013 Back     alignment and domain information
>KOG1594 consensus Uncharacterized enzymes related to aldose 1-epimerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG0676 Uncharacterized enzymes related to aldose 1-epimerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd09269 deoxyribose_mutarotase deoxyribose mutarotase_like Back     alignment and domain information
>PF14486 DUF4432: Domain of unknown function (DUF4432); PDB: 3TY1_A Back     alignment and domain information
>PF14315 DUF4380: Domain of unknown function (DUF4380) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query307
1snz_A344 Crystal Structure Of Apo Human Galactose Mutarotase 2e-71
1lur_A339 Crystal Structure Of The GalmALDOSE EPIMERASE HOMOL 2e-35
1l7j_A347 X-Ray Structure Of Galactose Mutarotase From Lactoc 1e-33
1ns0_A347 Crystal Structure Of Galactose Mutarotase From Lact 3e-33
1ns8_A347 Crystal Structure Of Galactose Mutarotase From Lact 5e-33
1nsm_A347 Crystal Structure Of Galactose Mutarotase From Lact 6e-33
1ns2_A347 Crystal Structure Of Galactose Mutarotase From Lact 7e-33
1nsu_A347 Crystal Structure Of Galactose Mutarotase From Lact 1e-32
1nsx_A347 Crystal Structure Of Galactose Mutarotase From Lact 1e-32
3imh_A338 Crystal Structure Of Galactose 1-Epimerase From Lac 3e-27
1z45_A699 Crystal Structure Of The Gal10 Fusion Protein Galac 3e-27
1yga_A342 Crystal Structure Of Saccharomyces Cerevisiae Yn9a 5e-15
>pdb|1SNZ|A Chain A, Crystal Structure Of Apo Human Galactose Mutarotase Length = 344 Back     alignment and structure 
Iteration: 1

 Score =  265 bits (677), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 137/305 (44%), Positives = 192/305 (62%), Gaps = 11/305 (3%)
Query: 3   DFKGNVADIVLGFDSIESYMKDNSPYFGCIVGRVANRIRDGKFALNGVHYTLPVNNGPNS 62
           D +G  +D+VLGF  +E Y++   PYFG ++GRVANRI  G F ++G  Y L +N  PNS
Sbjct: 49  DRQGRASDVVLGFAELEGYLQ-KQPYFGAVIGRVANRIAKGTFKVDGKEYHLAINKEPNS 107
Query: 63  LHGGNKGFDKVLWEVVEHKDGDHPSITFKYQSRDGEEGYPGDVTATATYALTSSKTMRLD 122
           LHGG +GFDKVLW      +G    + F   S DGEEGYPG++    TY L   + + ++
Sbjct: 108 LHGGVRGFDKVLWTPRVLSNG----VQFSRISPDGEEGYPGELKVWVTYTLDGGELI-VN 162
Query: 123 MEAVPKNKATPINLAQHTYWNLAGHNSGDVLDHSLQIWGSQITPVDQNSIPTGEFLPVKG 182
             A   ++ATP+NL  H+Y+NLAG  S ++ DH + I      PVD+  IPTGE  PV+G
Sbjct: 163 YRA-QASQATPVNLTNHSYFNLAGQASPNINDHEVTIEADTYLPVDETLIPTGEVAPVQG 221
Query: 183 TAFDFTSEKKIGNSITDVPGLGYDHNYVLDCGEEKIGLKHAAKVKDPSGSRVLDLWTDAP 242
           TAFD     ++G  + D    G+DHN+ L   +EK      A+V   +  RVL+++T  P
Sbjct: 222 TAFDLRKPVELGKHLQDFHLNGFDHNFCLKGSKEK---HFCARVHHAASGRVLEVYTTQP 278
Query: 243 GMQFYTANYVNG-VAGKEGAVYEKHSGLCLETQGFPNAINQSNFPSIVVQPGEKYKQTML 301
           G+QFYT N+++G + GK GAVY KHSG CLETQ +P+A+NQ  FP ++++PGE+Y  T  
Sbjct: 279 GVQFYTGNFLDGTLKGKNGAVYPKHSGFCLETQNWPDAVNQPRFPPVLLRPGEEYDHTTW 338
Query: 302 FEFSA 306
           F+FS 
Sbjct: 339 FKFSV 343
>pdb|1LUR|A Chain A, Crystal Structure Of The GalmALDOSE EPIMERASE HOMOLOGUE From C. Elegans, Northeast Structural Genomics Target Wr66 Length = 339 Back     alignment and structure
>pdb|1L7J|A Chain A, X-Ray Structure Of Galactose Mutarotase From Lactococcus Lactis (Apo) Length = 347 Back     alignment and structure
>pdb|1NS0|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus Lactis Mutant E304q Complexed With Galactose Length = 347 Back     alignment and structure
>pdb|1NS8|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus Lactis Mutant D243n Complexed With Galactose Length = 347 Back     alignment and structure
>pdb|1NSM|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus Lactis Mutant D243a Complexed With Galactose Length = 347 Back     alignment and structure
>pdb|1NS2|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus Lactis Mutant E304a Complexed With Galactose Length = 347 Back     alignment and structure
>pdb|1NSU|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus Lactis Mutant H96n Complexed With Galactose Length = 347 Back     alignment and structure
>pdb|1NSX|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus Lactis Mutant H170n Complexed With Galactose Length = 347 Back     alignment and structure
>pdb|3IMH|A Chain A, Crystal Structure Of Galactose 1-Epimerase From Lactobacillus Acidophilus Ncfm Length = 338 Back     alignment and structure
>pdb|1Z45|A Chain A, Crystal Structure Of The Gal10 Fusion Protein Galactose MutarotaseUDP-Galactose 4-Epimerase From Saccharomyces Cerevisiae Complexed With Nad, Udp-Glucose, And Galactose Length = 699 Back     alignment and structure
>pdb|1YGA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Yn9a Protein, New York Structural Genomics Consortium Length = 342 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query307
1lur_A339 Aldose 1-epimerase; vitamin B12, methyltransferase 1e-166
1snz_A344 Aldose 1-epimerase; mutarotase, galactosemia, isom 1e-166
1nsx_A347 Galactose mutarotase; epimerase, galactose metabol 1e-162
3imh_A338 Galactose-1-epimerase; structural genomics, PSI-2, 1e-146
1yga_A342 Hypothetical 37.9 kDa protein in BIO3-HXT17 interg 1e-145
3mwx_A326 Aldose 1-epimerase; structural genomics, joint cen 5e-74
1z45_A699 GAL10 bifunctional protein; epimerase, mutarotase, 1e-57
3nre_A291 Aldose 1-epimerase; structural genomics, joint cen 2e-50
3os7_A341 Galactose mutarotase-like protein; structural geno 4e-42
3q1n_A294 Galactose mutarotase related enzyme; structural ge 3e-15
3dcd_A307 Galactose mutarotase related enzyme; Q5FKD7 LAR33 9e-15
3k25_A289 SLR1438 protein; structural genomics, PSI-2, prote 3e-10
>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4 Length = 339 Back     alignment and structure
 Score =  464 bits (1196), Expect = e-166
 Identities = 93/304 (30%), Positives = 145/304 (47%), Gaps = 9/304 (2%)

Query: 3   DFKGNVADIVLGFDSIESYMKDNSPYFGCIVGRVANRIRDGKFALNGVHYTLPVNNGPNS 62
           D  G   D+VLGFD+I+ + K ++   G  VGRVANRI++     +G  YT+  NNGP+ 
Sbjct: 41  DKNGKNQDLVLGFDTIDEFEK-DAASIGKTVGRVANRIKNSTLHFDGKQYTMTPNNGPHY 99

Query: 63  LHGGNKGFDKVLWEVVEHKDGDHPSITFKYQSRDGEEGYPGDVTATATYALTSSKTMRLD 122
           LHGG  G     WEVV H      S++F  ++ + ++G PGD     TY +     + ++
Sbjct: 100 LHGGPNGLGYRKWEVVRHAP---ESVSFSVRANEQDDGLPGDAKIDVTYTVNDRNQLIIE 156

Query: 123 MEAVPKNKATPINLAQHTYWNLAGHNSGDVLDHSLQIWGSQITPVDQNSIPTGEFLPVKG 182
             A   +    + L  H YWNL G     V +H L++   +   VD    PTG    V  
Sbjct: 157 HHATC-DTPGLLALTNHAYWNLDGS--DTVAEHFLEMEADEFVEVDDTFCPTGAIRSVTD 213

Query: 183 TAFDFTSEKKIGNSITDV-PGLGYDHNYVLDCGEEKIGLKHAAKVKDPSGSRVLDLWTDA 241
           T FDF S K++  S  D    L  D++ V+             +         L + T  
Sbjct: 214 TGFDFRSGKQLKESGKDAEELLDLDNDLVITKKTPPSTPSTYLRFWSEKSGIELSITTSY 273

Query: 242 PGMQFYTANYVNGVAGKEGAVYEKHSGLCLETQGFPNAINQSNFPSIVVQPGEKYKQTML 301
           P +  Y + +++   GK+G  Y+ +  L +E Q    A N  +FP + ++PG+ Y Q ++
Sbjct: 274 PVIHLYASKFLDCK-GKKGEHYKANKALAIEPQFHSAAPNFDHFPDVSLRPGDHYCQEIV 332

Query: 302 FEFS 305
           + FS
Sbjct: 333 YTFS 336
>1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A* Length = 344 Back     alignment and structure
>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A* Length = 347 Back     alignment and structure
>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus} Length = 338 Back     alignment and structure
>1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae} Length = 342 Back     alignment and structure
>3mwx_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.45A {Bacillus subtilis} Length = 326 Back     alignment and structure
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699 Back     alignment and structure
>3nre_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.59A {Escherichia coli} Length = 291 Back     alignment and structure
>3os7_A Galactose mutarotase-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: PG4 TLA; 1.80A {Clostridium acetobutylicum} Length = 341 Back     alignment and structure
>3q1n_A Galactose mutarotase related enzyme; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.61A {Lactobacillus casei} Length = 294 Back     alignment and structure
>3dcd_A Galactose mutarotase related enzyme; Q5FKD7 LAR33 NESG X-RAY, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Lactobacillus acidophilus} Length = 307 Back     alignment and structure
>3k25_A SLR1438 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, SGR112, P73504_SYNY3; 2.55A {Synechocystis SP} Length = 289 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query307
3imh_A338 Galactose-1-epimerase; structural genomics, PSI-2, 100.0
1lur_A339 Aldose 1-epimerase; vitamin B12, methyltransferase 100.0
1snz_A344 Aldose 1-epimerase; mutarotase, galactosemia, isom 100.0
1nsx_A347 Galactose mutarotase; epimerase, galactose metabol 100.0
1yga_A342 Hypothetical 37.9 kDa protein in BIO3-HXT17 interg 100.0
1z45_A699 GAL10 bifunctional protein; epimerase, mutarotase, 100.0
3nre_A291 Aldose 1-epimerase; structural genomics, joint cen 100.0
3os7_A341 Galactose mutarotase-like protein; structural geno 100.0
3mwx_A326 Aldose 1-epimerase; structural genomics, joint cen 100.0
3q1n_A294 Galactose mutarotase related enzyme; structural ge 100.0
3dcd_A307 Galactose mutarotase related enzyme; Q5FKD7 LAR33 100.0
3k25_A289 SLR1438 protein; structural genomics, PSI-2, prote 100.0
2hta_A309 Putative enzyme related to aldose 1-epimerase; car 100.0
2cir_A297 Hexose-6-phosphate mutarotase; hypothetical protei 100.0
1jov_A270 HI1317; hypothetical protein, structure 2 function 99.91
3ty1_A384 Hypothetical aldose 1-epimerase; supersandwich, st 99.8
>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus} Back     alignment and structure
Probab=100.00  E-value=3.7e-69  Score=491.82  Aligned_cols=278  Identities=31%  Similarity=0.552  Sum_probs=249.5

Q ss_pred             eeeEecCCChHHhhhCCCCcccceeecCCCccCCCeEEECCEEEEccCCCCCCccCCCcCCCCeeeEEEEEeeCCCCCEE
Q 021840            9 ADIVLGFDSIESYMKDNSPYFGCIVGRVANRIRDGKFALNGVHYTLPVNNGPNSLHGGNKGFDKVLWEVVEHKDGDHPSI   88 (307)
Q Consensus         9 ~~vvlg~~~~~~y~~~~~~~~g~~l~p~~nRi~~g~~~~~G~~y~l~~n~~~~~lHG~~~g~~~~~w~v~~~~~~~~~~v   88 (307)
                      +|||+||++.++|..+ +.|+|++||||||||++|+|+++|++|+|++|+++|+||||+ ||+++.|+++...+.++++|
T Consensus        48 ~dvvlg~~~~~~y~~~-~~~~G~~lgp~anRI~~g~f~~~G~~y~L~~N~g~n~LHGg~-g~~~~~W~v~~~~~~~~~~v  125 (338)
T 3imh_A           48 ENMILSLNSPEDYSKE-RNFLGGTVGRIAGRVRAGQWKHGNEIHQLPLNDGDNHIHGGI-GTDMHVWDFRPSCDSEHARV  125 (338)
T ss_dssp             EECBCCCSSGGGGGTS-CCCTTCEECSBCSEEGGGEEEETTEEEECCCCBTTBEETTSS-CGGGSBCEEEEEECSSEEEE
T ss_pred             EEEEecCCChHHhccC-CCeEeeEEEeeCCEecCCEEEECCEEEECCCCCCCcCCCCCC-CcCCceEEEEeeeecCCCEE
Confidence            7999999999999876 889999999999999999999999999999999999999999 99999999965332235789


Q ss_pred             EEEEEeCCCCCCCCeeEEEEEEEEEcCCCcEEEEEEEeeCCcceeeeecCcceeecCCCCCCCccccEEEEecCeEEeeC
Q 021840           89 TFKYQSRDGEEGYPGDVTATATYALTSSKTMRLDMEAVPKNKATPINLAQHTYWNLAGHNSGDVLDHSLQIWGSQITPVD  168 (307)
Q Consensus        89 ~l~~~~~~~~~gyP~~~~~~v~y~L~~~~~L~i~~~~~n~~~~~p~~lg~HpyFnl~~~~~~~~~~~~l~~~a~~~~~~d  168 (307)
                      +|++.++++++||||+|+++|+|+|+++++|+|+|+++ ++++||||+|+||||||++    ++.+|+|+|+|++++++|
T Consensus       126 ~l~l~s~d~~~gyPg~~~~~vtY~L~~~~~L~i~~~a~-~d~~tp~nlg~HpYFnL~g----~i~~~~L~i~a~~~~~~d  200 (338)
T 3imh_A          126 DLTLFDPDGNNDYPGNLKLHARYELDNENNLHYLLEAV-SDKLTIFNPVNHTYFNLGE----RAEDLNLQMNADYYLPVD  200 (338)
T ss_dssp             EEEEEECTTGGGCCSCEEEEEEEEEETTSEEEEEEEEE-ESSSEECBCEECCEECTTS----CGGGCEEEECEEEECCBC
T ss_pred             EEEEECCccccCCCeEEEEEEEEEEecCCeEEEEEEEe-cCCCeEEEEeeCCEEeCCC----CcCCeEEEEEcCcEEEeC
Confidence            99999988889999999999999998557899999998 5999999999999999986    689999999999999999


Q ss_pred             CCCCCCccccccCCCCccccccccccccccCCCC-----CCceeeEEeCCCccccCceeEEEEEcCCCCcEEEEEeCCCe
Q 021840          169 QNSIPTGEFLPVKGTAFDFTSEKKIGNSITDVPG-----LGYDHNYVLDCGEEKIGLKHAAKVKDPSGSRVLDLWTDAPG  243 (307)
Q Consensus       169 ~~~lptg~~~~~~~t~~df~~~~~l~~~~~~~~~-----~~~D~~f~l~~~~~~~~~~~~~~l~~~~~g~~l~v~~~~p~  243 (307)
                      +++||||++++|++|++||+.+++|++.+.....     .++||||+++..      ..+|+|.+  +||+|+|++++|+
T Consensus       201 ~~~iPTG~~~~v~gt~~DFr~~~~ig~~~~~~~~q~~~~~g~Dh~f~l~~~------~~~a~l~~--sg~~l~v~t~~p~  272 (338)
T 3imh_A          201 EAGLPDRGMAEVAGTAFDFRKTKRIGDALNSDDSQIKLRNGLDHPFILNGN------NPAALLSS--NKHRLIVKTNAPA  272 (338)
T ss_dssp             TTSSBSSCCEECTTSTTCCSSCEEHHHHHTSCCHHHHHHTSCEEEEEECSC------SCSEEEEC--SSEEEEEEESSSE
T ss_pred             CccCCcCceecCCCCcccCCCCeEcchhhhccchhhcccCCCCCceeecCC------ceEEEEEC--CCeEEEEEeCCCE
Confidence            9999999999999999999999999887643210     169999998631      34678865  8999999999999


Q ss_pred             EEEEcCCCCCCcCCCCCcccCCceEEEEcCCCCCCCCCCCCCCCceECCCCEEEEEEEEEEE
Q 021840          244 MQFYTANYVNGVAGKEGAVYEKHSGLCLETQGFPNAINQSNFPSIVVQPGEKYKQTMLFEFS  305 (307)
Q Consensus       244 ~~v~t~~~~~~~~~~~~~~~~~~~~iciEp~~~pda~n~~~~~~~~L~pG~~~~~~~~y~f~  305 (307)
                      +||||+++++.. + .|..|.++.+||||||.+|  +|+++|+.++|+|||+|+++|+|+|+
T Consensus       273 ~q~YTgn~l~~~-g-~g~~~~~~~g~clE~q~~P--~n~~~f~~~vL~pGe~y~~~t~y~f~  330 (338)
T 3imh_A          273 LVLYAGNHFNHT-G-IVNNIGQYDGITFEAQCPP--AEGNDLGQITLLPFEKFKRTVDWKFE  330 (338)
T ss_dssp             EEEECCTTCCSB-T-TBTTCCTTSCEECEEESCC--CSSSCCGGGEECTTCCEEEEEEEEEE
T ss_pred             EEEeCCCCcCCC-C-CCcccCccCEEEEEccCCC--CCCCCCCCeEECCCCEEEEEEEEEEC
Confidence            999999988654 4 5677888999999999999  89999999999999999999999997
>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4 Back     alignment and structure
>1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A* Back     alignment and structure
>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A* Back     alignment and structure
>1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae} Back     alignment and structure
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Back     alignment and structure
>3nre_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.59A {Escherichia coli} Back     alignment and structure
>3os7_A Galactose mutarotase-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: PG4 TLA; 1.80A {Clostridium acetobutylicum} Back     alignment and structure
>3mwx_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.45A {Bacillus subtilis} Back     alignment and structure
>3q1n_A Galactose mutarotase related enzyme; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.61A {Lactobacillus casei} Back     alignment and structure
>3dcd_A Galactose mutarotase related enzyme; Q5FKD7 LAR33 NESG X-RAY, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Lactobacillus acidophilus} Back     alignment and structure
>3k25_A SLR1438 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, SGR112, P73504_SYNY3; 2.55A {Synechocystis SP} Back     alignment and structure
>2hta_A Putative enzyme related to aldose 1-epimerase; carbohydrate, MU YEAD, GALM, sugar phosphate, isomerase; 1.90A {Salmonella typhimurium} PDB: 2htb_A Back     alignment and structure
>2cir_A Hexose-6-phosphate mutarotase; hypothetical protein, isomerase; HET: BG6; 1.60A {Saccharomyces cerevisiae} PDB: 2ciq_A* 2cis_A* Back     alignment and structure
>1jov_A HI1317; hypothetical protein, structure 2 function project, S2F, structural genomics, unknown function; 1.57A {Haemophilus influenzae} SCOP: b.30.5.7 Back     alignment and structure
>3ty1_A Hypothetical aldose 1-epimerase; supersandwich, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.90A {Klebsiella pneumoniae subsp} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 307
d1nsza_340 b.30.5.4 (A:) Galactose mutarotase {Lactococcus la 2e-94
d1z45a1342 b.30.5.4 (A:358-699) Galactose mutarotase {Baker's 4e-85
d1lura_329 b.30.5.4 (A:) Aldose 1-epimerase homologue {Nemato 6e-85
d1so0a_344 b.30.5.4 (A:) Galactose mutarotase {Human (Homo sa 8e-80
>d1nsza_ b.30.5.4 (A:) Galactose mutarotase {Lactococcus lactis [TaxId: 1358]} Length = 340 Back     information, alignment and structure

class: All beta proteins
fold: Supersandwich
superfamily: Galactose mutarotase-like
family: Aldose 1-epimerase (mutarotase)
domain: Galactose mutarotase
species: Lactococcus lactis [TaxId: 1358]

 Score =  280 bits (718), Expect = 2e-94
 Identities = 86/311 (27%), Positives = 142/311 (45%), Gaps = 13/311 (4%)

Query: 1   MLDFKGNVADIVLGFDSIESYMKDNSPYFGCIVGRVANRIRDGKFALNGVHYTLPVNNGP 60
           ++D++ +   ++LGFDS + Y++ +  Y G  VG  A RI+DG   ++G  Y L  N GP
Sbjct: 33  IVDWQKDGKHLILGFDSAKEYLEKD-AYPGATVGPTAGRIKDGLVKISGKDYILNQNEGP 91

Query: 61  NSLHGGNKGFDKVLWEVVEHKDGDHPSITFKYQSRDGEEGYPGDVTATATYALTSSKTMR 120
            +LHGG +     LW       G    + F   S DG  GYPG +  + T++       +
Sbjct: 92  QTLHGGEESIHTKLWTYEVTDLGAEVQVKFSLVSNDGTNGYPGKIEMSVTHSFDDDNKWK 151

Query: 121 LDMEAVPKNKATPINLAQHTYWNLAGHNSGDVLDHSLQIWGSQITPV-DQNSIPTGEFLP 179
           +  EA+  +K T  N   + Y+NL G  S  V +H L++  S+  P+ DQ  I  G+ + 
Sbjct: 152 IHYEAIS-DKDTVFNPTGNVYFNLNGDASESVENHGLRLAASRFVPLKDQTEIVRGDIVD 210

Query: 180 VKGTAFDFTSEKKIGNSITD-----VPGLGYDHNYVLDCGEEKIGLKHAAKVKDPSGSRV 234
           +K T  DF  EK++ N+            G DH ++LD            + +       
Sbjct: 211 IKNTDLDFRQEKQLSNAFNSNMEQVQLVKGIDHPFLLDQLGL-----DKEQARLTLDDTS 265

Query: 235 LDLWTDAPGMQFYTANYVNGVAGKEGAVYEKHSGLCLETQGFPNAINQSNFPSIVVQPGE 294
           + ++TD P +  +TAN+ +            H G+  E Q  P +        I ++ GE
Sbjct: 266 ISVFTDQPSIVIFTANFGDLGTLYHEKKQVHHGGITFECQVSPGSEQIPELGDISLKAGE 325

Query: 295 KYKQTMLFEFS 305
           KY+ T ++   
Sbjct: 326 KYQATTIYSLH 336
>d1z45a1 b.30.5.4 (A:358-699) Galactose mutarotase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 Back     information, alignment and structure
>d1lura_ b.30.5.4 (A:) Aldose 1-epimerase homologue {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 329 Back     information, alignment and structure
>d1so0a_ b.30.5.4 (A:) Galactose mutarotase {Human (Homo sapiens) [TaxId: 9606]} Length = 344 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query307
d1lura_329 Aldose 1-epimerase homologue {Nematode (Caenorhabd 100.0
d1nsza_340 Galactose mutarotase {Lactococcus lactis [TaxId: 1 100.0
d1z45a1342 Galactose mutarotase {Baker's yeast (Saccharomyces 100.0
d1so0a_344 Galactose mutarotase {Human (Homo sapiens) [TaxId: 100.0
d1jova_269 Hypothetical protein HI1317 {Haemophilus influenza 99.9
>d1lura_ b.30.5.4 (A:) Aldose 1-epimerase homologue {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
class: All beta proteins
fold: Supersandwich
superfamily: Galactose mutarotase-like
family: Aldose 1-epimerase (mutarotase)
domain: Aldose 1-epimerase homologue
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=9e-72  Score=508.05  Aligned_cols=298  Identities=32%  Similarity=0.581  Sum_probs=267.6

Q ss_pred             CCCCCCceeeeEecCCChHHhhhCCCCcccceeecCCCccCCCeEEECCEEEEccCCCCCCccCCCcCCCCeeeEEEEEe
Q 021840            1 MLDFKGNVADIVLGFDSIESYMKDNSPYFGCIVGRVANRIRDGKFALNGVHYTLPVNNGPNSLHGGNKGFDKVLWEVVEH   80 (307)
Q Consensus         1 ~~d~~g~~~~vvlg~~~~~~y~~~~~~~~g~~l~p~~nRi~~g~~~~~G~~y~l~~n~~~~~lHG~~~g~~~~~w~v~~~   80 (307)
                      +||++|+.+||||||++.++|+.+ +.|+|++||||||||++|+|+++|++|+|++|+++|+|||+..||+.+.|+++..
T Consensus        29 ~pd~~g~~~~vvlg~d~~~~Y~~~-~~~~Ga~igr~aNRI~~g~f~~~G~~y~L~~N~~~n~lHGg~~g~~~~~w~v~~~  107 (329)
T d1lura_          29 FPDKNGKNQDLVLGFDTIDEFEKD-AASIGKTVGRVANRIKNSTLHFDGKQYTMTPNNGPHYLHGGPNGLGYRKWEVVRH  107 (329)
T ss_dssp             EECTTSCEEECBCCCSSHHHHHHC-SSCTTCEECSBCSEEGGGEEEETTEEEECCCSBTTBEETTCTTSGGGSBCEEEEE
T ss_pred             EECCCCCEeeeEECCCCHHHHhhC-CCccCcEecCcCCeeeCCeEEECCEEEEeccCCCCcccccCCCCcceEEEEEEee
Confidence            489999999999999999999987 8899999999999999999999999999999999999999999999999999888


Q ss_pred             eCCCCCEEEEEEEeCCCCCCCCeeEEEEEEEEEcCCCcEEEEEEEeeCCcceeeeecCcceeecCCCCCCCccccEEEEe
Q 021840           81 KDGDHPSITFKYQSRDGEEGYPGDVTATATYALTSSKTMRLDMEAVPKNKATPINLAQHTYWNLAGHNSGDVLDHSLQIW  160 (307)
Q Consensus        81 ~~~~~~~v~l~~~~~~~~~gyP~~~~~~v~y~L~~~~~L~i~~~~~n~~~~~p~~lg~HpyFnl~~~~~~~~~~~~l~~~  160 (307)
                      .   .++++|++.+++++.||||++.++|+|+|++++.|+|+++++ ++++||+++|+||||||++.  .++.+|.|+|+
T Consensus       108 ~---~~~v~~~~~~~~~~~GyPg~l~~~vtY~L~~~~~l~i~~~a~-~d~~tp~nlt~H~YFnL~~~--~~i~~h~L~i~  181 (329)
T d1lura_         108 A---PESVSFSVRANEQDDGLPGDAKIDVTYTVNDRNQLIIEHHAT-CDTPGLLALTNHAYWNLDGS--DTVAEHFLEME  181 (329)
T ss_dssp             E---TTEEEEEEEEEHHHHSSSSEEEEEEEEEECTTSEEEEEEEEE-CSSCEECBCEECCEECSSCC--SCSTTCEEEEC
T ss_pred             c---CceeEEEEEecCCccCcccceEEEEEEEEccCCEEEEEEEEe-ecccccccccccceeecccc--ccccCeEEEeC
Confidence            7   689999999987778999999999999998777899999986 49999999999999999863  57899999999


Q ss_pred             cCeEEeeCCCCCCCccccccCCCCccccccccccccccCC-CCCCceeeEEeCCCccccCceeEEEEEcCCCCcEEEEEe
Q 021840          161 GSQITPVDQNSIPTGEFLPVKGTAFDFTSEKKIGNSITDV-PGLGYDHNYVLDCGEEKIGLKHAAKVKDPSGSRVLDLWT  239 (307)
Q Consensus       161 a~~~~~~d~~~lptg~~~~~~~t~~df~~~~~l~~~~~~~-~~~~~D~~f~l~~~~~~~~~~~~~~l~~~~~g~~l~v~~  239 (307)
                      |++++++|+++||||++.+++++++|||.++.|++.+... ...++|++|++............++|.++.+|++|+|++
T Consensus       182 a~~~l~~d~~~iPtG~~~~v~~t~~Dfr~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~sg~~l~v~t  261 (329)
T d1lura_         182 ADEFVEVDDTFCPTGAIRSVTDTGFDFRSGKQLKESGKDAEELLDLDNDLVITKKTPPSTPSTYLRFWSEKSGIELSITT  261 (329)
T ss_dssp             EEEEEEECTTSCEEEEEEECTTSTTCCTTCEETTCSCCCSSCCCCCEEEEEECCCCC----CCCEEEECTTTCEEEEEEE
T ss_pred             cCeEEEeCccccccccccccccccccccccccccccccccccceecCCCEEEeecccCCCcceeEEEeCCCCceEEEEeC
Confidence            9999999999999999999999999999999998765432 222689999976432111123468999999999999999


Q ss_pred             CCCeEEEEcCCCCCCcCCCCCcccCCceEEEEcCCCCCCCCCCCCCCCceECCCCEEEEEEEEEEEe
Q 021840          240 DAPGMQFYTANYVNGVAGKEGAVYEKHSGLCLETQGFPNAINQSNFPSIVVQPGEKYKQTMLFEFSA  306 (307)
Q Consensus       240 ~~p~~~v~t~~~~~~~~~~~~~~~~~~~~iciEp~~~pda~n~~~~~~~~L~pG~~~~~~~~y~f~~  306 (307)
                      ++|++||||+++++ .+++.|.++.++.+||||||.+|||+|+++|+.++|+|||+|+++|+|+|++
T Consensus       262 ~~p~~qvYT~~~l~-~~~~~g~~~~~~~gi~lEpq~~PdA~N~~~f~~~~L~pge~y~~~~~y~Fs~  327 (329)
T d1lura_         262 SYPVIHLYASKFLD-CKGKKGEHYKANKALAIEPQFHSAAPNFDHFPDVSLRPGDHYCQEIVYTFSH  327 (329)
T ss_dssp             SSSEEEEECCTTCC-EECGGGCEECTTCCEEEEEESCTTGGGCTTSCCCEECTTCCEEEEEEEEEEE
T ss_pred             CCCEEEEeCCCCcC-CCCCCCCCcCCCCEEEEEccCCCCccccCCCCCeEECCCCEEEEEEEEEEec
Confidence            99999999999875 4567788888899999999999999999999999999999999999999986
>d1nsza_ b.30.5.4 (A:) Galactose mutarotase {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
>d1z45a1 b.30.5.4 (A:358-699) Galactose mutarotase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1so0a_ b.30.5.4 (A:) Galactose mutarotase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jova_ b.30.5.7 (A:) Hypothetical protein HI1317 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure